Note: all start coordinates in our database are 0-based, not
1-based. See explanation
here.
TSRchitect RAMPAGE TSS Read Density (tss_RAMPAGE2_star) Track Description
Description
These tracks show the density of RAMPAGE reads from different developmental stages
of D. ananassae embryos.
The datasets were retrieved from the Gene Expression Omnibus database at NCBI under the
accession number GSE89298. The RAMPAGE reads were mapped against the D. ananassae (DanaCAF1) assembly using STAR.
References
Dobin A, Davis CA, Schlesinger F, Drenkow J, Zaleski C, Jha S, Batut P, Chaisson M, Gingeras TR. STAR: ultrafast universal RNA-seq aligner. Bioinformatics. 2013 Jan 1;29(1):15-21.