Schema for Annotation Projects - GEP Annotation Projects

Database: DeugGB2 Primary Table: annotation_projects Row Count: 125 Data last updated: 2022-10-20

field	example	SQL type	info
`bin`	585	`smallint(5) unsigned`	range
`chrom`	KB464648	`varchar(255)`	values
`chromStart`	0	`int(10) unsigned`	range
`chromEnd`	40000	`int(10) unsigned`	range
`name`	Deug1_contig2	`varchar(255)`	values
`score`	0	`int(10) unsigned`	range
`strand`	+	`char(1)`	values

Sample Rows

bin	chrom	chromStart	chromEnd	name	strand
585	KB464648	0	40000	Deug1_contig2	+
585	KB464648	14000	54000	Deug1_contig3	+
585	KB464648	30000	75000	Deug1_contig4	+
585	KB464648	54000	88000	Deug1_contig5	+
585	KB464648	75000	125000	Deug1_contig6	+
73	KB464648	88000	135000	Deug1_contig7	+
73	KB464648	103000	150000	Deug1_contig8	+
586	KB464648	135000	182797	Deug1_contig9	+
586	KB464648	150000	182797	Deug1_contig10	+
585	KB464655	0	10547	Deug1_contig1	+

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.

Annotation Projects (annotation_projects) Track Description


	Description This track shows the location of the GEP annotation projects relative to the D. eugracilis DeugGB2 assembly.