Schema for Tallymer - Repetitive Regions Identified by Tallymer

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Database: DkikGB2 Primary Table: tallymer Data last updated: 2017-08-17
Big Bed File: /gbdb/DkikGB2/bbi/DkikGB2.tallymer.bb
Item Count: 169,907
Format description: Browser Extensible Data

field	example	description
`chrom`	AFFH02000003	Reference sequence chromosome or scaffold
`chromStart`	12	Start position in chromosome
`chromEnd`	54	End position in chromosome
`name`	tallymer_53772	Name of item.

Sample Rows

chrom	chromStart	chromEnd	name
AFFH02000003	12	54	tallymer_53772

Tallymer (tallymer) Track Description


	Description This evidence track shows the tallymer analysis of the D. kikkawai genome. References The Tallymer software is available as part of the GenomeTools package. Kurtz S., Narechania A., Stein J.C., Ware D. A new method to compute K-mer frequencies and its application to annotate large repetitive plant genomes. BMC Genomics 2008, 9:517.

Description

References