Schema for GLEAN-R Genes - FlyBase GLEAN-R Gene Predictions |
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Database: DmojImproved Primary Table: gleanr_genes Row Count: 14,595
| field | example | SQL type | info |
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| chrom | improved_6498 | varchar(255) | values |
| chromStart | 181271 | int(10) unsigned | range |
| chromEnd | 424213 | int(10) unsigned | range |
| name | Dmoj_GI14008-PA | varchar(255) | values |
| score | 1000 | int(10) unsigned | range |
| strand | + | char(1) | values |
| thickStart | 181271 | int(10) unsigned | range |
| thickEnd | 424213 | int(10) unsigned | range |
| reserved | 0 | int(10) unsigned | range |
| blockCount | 13 | int(11) | range |
| blockSizes | 130,128,169,182,153,498,383... | longblob | |
| chromStarts | 0,31817,61964,234547,239429... | longblob | |
| id | FBpp0163225 | varchar(255) | values |
| description | parent:FBgn0136762;FBtr0164733 | longblob | |
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Sample Rows
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| chrom | chromStart | chromEnd | name | score | strand | thickStart | thickEnd | reserved | blockCount | blockSizes | chromStarts | id | description |
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| improved_6498 | 181271 | 424213 | Dmoj_GI14008-PA | 1000 | + | 181271 | 424213 | 0 | 13 | 130,128,169,182,153,498,383,133,138,281,160,159,228, | 0,31817,61964,234547,239429,239742,241111,241551,241741,241936,242269,242484,242714, | FBpp0163225 | parent:FBgn0136762;FBtr0164733 |
| improved_6498 | 247299 | 248525 | Dmoj_GI14144-PA | 996 | - | 247299 | 248525 | 0 | 2 | 4,1222, | 0,4, | FBpp0163361 | parent:FBgn0136897;FBtr0164869 |
| improved_6498 | 386503 | 389076 | Dmoj_GI14143-PA | 1000 | - | 386503 | 389076 | 0 | 4 | 682,1434,90,146, | 0,776,2278,2427, | FBpp0163360 | parent:FBgn0136896;FBtr0164868 |
| improved_6498 | 428183 | 430254 | Dmoj_GI14009-PA | 1000 | + | 428183 | 430254 | 0 | 4 | 126,512,378,715, | 0,350,919,1356, | FBpp0163226 | parent:FBgn0136763;FBtr0164734 |
| improved_6498 | 454500 | 469737 | Dmoj_moj152-PA | 1000 | - | 454500 | 469737 | 0 | 3 | 170,926,1241, | 0,225,13996, | FBpp0163359 | parent:FBgn0084512;FBtr0164867 |
| improved_6498 | 473751 | 551972 | Dmoj_GI14010-PA | 1000 | + | 473751 | 551972 | 0 | 6 | 49,172,48,97,319,71, | 0,55445,58691,77579,77756,78150, | FBpp0163227 | parent:FBgn0136764;FBtr0164735 |
| improved_6498 | 591534 | 592209 | Dmoj_GI14140-PA | 1000 | - | 591534 | 592209 | 0 | 1 | 675, | 0, | FBpp0163357 | parent:FBgn0136894;FBtr0164865 |
| improved_6498 | 621645 | 622172 | Dmoj_GI14139-PA | 1000 | - | 621645 | 622172 | 0 | 2 | 277,200, | 0,327, | FBpp0163356 | parent:FBgn0136893;FBtr0164864 |
| improved_6498 | 639396 | 640010 | Dmoj_GI14011-PA | 1000 | + | 639396 | 640010 | 0 | 3 | 137,195,172, | 0,191,442, | FBpp0163228 | parent:FBgn0136765;FBtr0164736 |
| improved_6498 | 640103 | 640628 | Dmoj_GI14138-PA | 1000 | - | 640103 | 640628 | 0 | 2 | 300,162, | 0,363, | FBpp0163355 | parent:FBgn0136892;FBtr0164863 |
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Note: all start coordinates in our database are 0-based, not
1-based. See explanation
here.
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GLEAN-R Genes (gleanr_genes) Track Description
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Description
This track contains GLEAN-R gene predictions (release 1.3) generated by the
Drosophila 12 Genomes Consortium and maintained by FlyBase.
References
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