Schema for TRF Density - Tandem Repeats Density (1kb window, 0.5kb overlap)
  Database: DmojImproved    Primary Table: trf_density    Row Count: 1
fieldexampleSQL type info
fileName /gbdb/DmojImproved/bbi/Dmoj...varchar(255) values

This table points to a file in BigWig format.

Sample Rows
 
fileName
/gbdb/DmojImproved/bbi/DmojImproved.trf_density.bw

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.

TRF Density (trf_density) Track Description
 

Description

This track shows the density of tandem repeats identified by Tandem Repeats Finder using a 1kb window and a 500bp step size.

References

Benson G. Tandem repeats finder: a program to analyze DNA sequences. Nucleic Acids Research (1999) Vol. 27, No. 2, pp. 573-580.