Schema for CpG Islands - CpG Islands Identified by newcpgreport

Database: DperCAF1 Primary Table: cpg_islands Row Count: 81,558 Data last updated: 2022-10-20

field	example	SQL type	info
`bin`	585	`smallint(5) unsigned`	range
`chrom`	super_0	`varchar(255)`	values
`chromStart`	1349	`int(10) unsigned`	range
`chromEnd`	1666	`int(10) unsigned`	range
`name`	cpg_75561	`varchar(255)`	values
`score`	88	`int(10) unsigned`	range
`strand`	+	`char(1)`	values

Sample Rows

bin	chrom	chromStart	chromEnd	name	score	strand
585	super_0	1349	1666	cpg_75561	88	+
585	super_0	2092	2301	cpg_75562	128	+
585	super_0	34843	35110	cpg_75563	82	+
585	super_0	35292	35885	cpg_75564	91	+
585	super_0	35888	37427	cpg_75565	91	+
585	super_0	38493	38731	cpg_75566	131	+
585	super_0	38980	39789	cpg_75567	87	+
585	super_0	42675	42901	cpg_75568	100	+
585	super_0	44203	44412	cpg_75569	80	+
585	super_0	46537	46850	cpg_75570	124	+

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.