Schema for tantan - Simple Repeats Identified by tantan

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Database: DrhoGB2 Primary Table: tantan Data last updated: 2017-08-16
Big Bed File: /gbdb/DrhoGB2/bbi/DrhoGB2.tantan.bb
Item Count: 740,147
Format description: Browser Extensible Data

field	example	description
`chrom`	AFPP02000001	Reference sequence chromosome or scaffold
`chromStart`	491	Start position in chromosome
`chromEnd`	504	End position in chromosome
`name`	tantan_1	Name of item.

Sample Rows

chrom	chromStart	chromEnd	name
AFPP02000001	491	504	tantan_1

tantan (tantan) Track Description


	Description This track shows the locations of simple repeats and low complexity sequences identified by tantan. References Frith MC. A new repeat-masking method enables specific detection of homologous sequences. Nucleic Acids Res. 2011 Mar;39(4):e23.

Description

References