Schema for Tallymer - Repetitive Regions Identified by Tallymer

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Database: DserGB1 Primary Table: tallymer Data last updated: 2017-08-06
Big Bed File: /gbdb/DserGB1/bbi/DserGB1.tallymer.bb
Item Count: 211,817
Format description: Browser Extensible Data

field	example	description
`chrom`	MTTC01000002	Reference sequence chromosome or scaffold
`chromStart`	21497	Start position in chromosome
`chromEnd`	21542	End position in chromosome
`name`	tallymer_8	Name of item.

Sample Rows

chrom	chromStart	chromEnd	name
MTTC01000002	21497	21542	tallymer_8
MTTC01000002	23926	25232	tallymer_9

Tallymer (tallymer) Track Description


	Description This evidence track shows the tallymer analysis of the D. serrata genome. References The Tallymer software is available as part of the GenomeTools package. Kurtz S., Narechania A., Stein J.C., Ware D. A new method to compute K-mer frequencies and its application to annotate large repetitive plant genomes. BMC Genomics 2008, 9:517.

Description

References