Schema for Annotation Projects - GEP Annotation Projects

Database: DtakGB2 Primary Table: annotation_projects Row Count: 130 Data last updated: 2022-10-20

field	example	SQL type	info
`bin`	585	`smallint(5) unsigned`	range
`chrom`	AFFI02007110	`varchar(255)`	values
`chromStart`	0	`int(10) unsigned`	range
`chromEnd`	50000	`int(10) unsigned`	range
`name`	Dtak2_contig36	`varchar(255)`	values
`score`	0	`int(10) unsigned`	range
`strand`	+	`char(1)`	values

Sample Rows

bin	chrom	chromStart	chromEnd	name	strand
585	AFFI02007110	0	50000	Dtak2_contig36	+
585	AFFI02007110	30000	70000	Dtak2_contig37	+
585	AFFI02007110	50000	87902	Dtak2_contig38	+
585	KB460245	0	55000	Dtak2_contig15	-
585	KB460245	20000	66500	Dtak2_contig16	-
585	KB460245	40000	76460	Dtak2_contig17	-
585	KB460776	0	68000	Dtak2_contig18	+
585	KB460776	5000	76000	Dtak2_contig19	+
585	KB460776	68000	110000	Dtak2_contig20	+
585	KB460776	76000	126000	Dtak2_contig21	+

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.

Annotation Projects (annotation_projects) Track Description


	Description This track shows the location of the GEP annotation projects relative to the D. takahashii DtakGB2 assembly.