Embryos ATAC-Seq Track Settings

ATAC-Seq of Drosophila Embryos (All Expression and Regulation tracks)

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	hide	ATAC Peaks (2-4 hrs Embryos)	ATAC Peaks (2-4 hrs Embryos)	Schema
	hide	ATAC logLR (2-4 hrs Embryos)	ATAC Log Likelihood Enrichment (2-4 hrs Embryos)	Schema

Description

These tracks show the results from Assay for Transposase-Accessible Chromatin using sequencing (ATAC-Seq) of D. melanogaster 2-4hr embryos. The peak calls and the log likelihood ratio evidence tracks were produced by MACS2.

The datasets were obtained from the NCBI BioProject database under the accession number PRJNA284259.

Credits

Koenecke N, Johnston J, Gaertner B, Natarajan M, Zeitlinger J. Genome-wide identification of Drosophila dorso-ventral enhancers by differential histone acetylation analysis. Genome Biol. 2016 Sep 27;17(1):196.

Zhang Y, Liu T, Meyer CA, Eeckhoute J, Johnson DS, Bernstein BE, Nusbaum C, Myers RM, Brown M, Li W, Liu XS. Model-based analysis of ChIP-Seq (MACS). Genome Biol. 2008;9(9):R137.