Embryos FAIRE-Seq Track Settings

FAIRE-Seq of Drosophila Embryos (All Expression and Regulation tracks)

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	hide Configure	FAIRE Peaks (2-4 hrs Embryos)	FAIRE Peaks (2-4 hrs Embryos)	Schema
	hide Configure	FAIRE logLR (2-4 hrs Embryos)	FAIRE Log Likelihood Enrichment (2-4 hrs Embryos)	Schema
	hide Configure	FAIRE Peaks (6-8 hrs Embryos)	FAIRE Peaks (6-8 hrs Embryos)	Schema
	hide Configure	FAIRE logLR (6-8 hrs Embryos)	FAIRE Log Likelihood Enrichment (6-8 hrs Embryos)	Schema
	hide Configure	FAIRE Peaks (16-18 hrs Embryos)	FAIRE Peaks (16-18 hrs Embryos)	Schema
	hide Configure	FAIRE logLR (16-18 hrs Embryos)	FAIRE Log Likelihood Enrichment (16-18 hrs Embryos)	Schema

Description

These tracks show the results from Formaldehyde-Assisted Isolation of Regulatory Elements Sequencing (FAIRE-Seq) of Drosophila embryos. The peak calls and the log likelihood ratio evidence tracks were produced by MACS2.

The datasets were obtained from the NCBI BioProject database under the accession number PRJNA168643.

Credits

McKay DJ, Lieb JD. A common set of DNA regulatory elements shapes Drosophila appendages. Dev Cell. 2013 Nov 11;27(3):306-18.

Zhang Y, Liu T, Meyer CA, Eeckhoute J, Johnson DS, Bernstein BE, Nusbaum C, Myers RM, Brown M, Li W, Liu XS. Model-based analysis of ChIP-Seq (MACS). Genome Biol. 2008;9(9):R137.