Description

Small (1-10bp) tandem repeats within each scaffold of the D. mojavensis genome were identified using PHOBOS with the following parameters:

• Match: 1
• Mismatch: -5
• Indel: -5
• Min Score: 12
• Recursion: 5

References

Mayer, Christoph, Phobos 3.3.11, 2006-2010, http://www.rub.de/spezzoo/cm/cm_phobos.htm.
Mayer C, Leese F, Tollrian R. Genome-wide analysis of tandem repeats in Daphnia pulex--a comparative approach. BMC Genomics. 2010 Apr 30;11:277.