Description
This track was created by mapping D. persimilis RNA-Seq reads against the D. persimilis DperCAF1 assembly using
HISAT2. The RNA-Seq
read coverage tracks were produced by the genomecov subprogram in
bedtools.
The RNA-Seq data were obtained from the NCBI Sequence Read Archive under the
BioProject accession number PRJNA388952.
References
Kim D, Langmead B, Salzberg SL.
HISAT: a fast spliced aligner with low memory requirements
Nat Methods. 2015 Apr;12(4):357-60.
Quinlan AR, Hall IM.
BEDTools: a flexible suite of utilities for comparing genomic features.
Bioinformatics. 2010 Mar 15;26(6):841-2.
The RNA-Seq data were produced by Dr. Brian Oliver's Developmental Genomics Lab at NIDDK, NIH.
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