TRF Density Track Settings
 
Tandem Repeats Density (1kb window, 0.5kb overlap)   (All Variation and Repeats tracks)

Display mode:   

Type of graph:
Track height: pixels (range: 12 to 100)
Data view scaling: Always include zero: 
Vertical viewing range: min:  max:   (range: 0 to 1)
Transform function:Transform data points by: 
Windowing function: Smoothing window:  pixels
Negate values:
Draw y indicator lines:at y = 0.0:    at y =
Graph configuration help
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Data last updated at UCSC: 2013-09-16 18:44:54

Description

This track shows the density of tandem repeats identified by Tandem Repeats Finder using a 1kb window and a 500bp step size.

References

Benson G. Tandem repeats finder: a program to analyze DNA sequences. Nucleic Acids Research (1999) Vol. 27, No. 2, pp. 573-580.