Unique ChIP-chip Probes Track Settings
 
Uniquely-Placed ChIP-chip Probes   (All ChIP-chip Tracks)

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 GPL6888  Henikoff_Dmel_r52_ChIP Tiling Design   Schema 

Description

These tracks show the locations of microarray probes that can be uniquely placed in the D. melanogaster (dm6) assembly. Each probe was mapped against the genome assembly using exonerate and only the alignments with 97% identity or above were kept. The uniqueness of the probes was determined by the posToProbeAnno function in the Ringo package in Bioconductor.

References

Toedling J, Huber W. Analyzing ChIP-chip data using bioconductor. PLoS Comput Biol. 2008 Nov;4(11):e1000227.