Eye Discs ATAC-Seq Track Settings
ATAC-Seq of D. melanogaster Eye Discs   (All Expression and Regulation tracks)

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3rd Instar
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 Eye Discs IDR  IDR Peaks for D. melanogaster Eye-antennal Discs   Schema 
 Eye Discs MACS  MACS2 Peaks for D. melanogaster Eye-antennal Discs   Schema 
 Eye Discs logLR  Log Likelihood Enrichment for D. melanogaster Eye-antennal Discs   Schema 


These tracks show the results from Assay for Transposase-Accessible Chromatin using sequencing (ATAC-Seq) of D. melanogaster eye-antennal discs from 3rd instar larvae. The peak calls and the log likelihood ratio evidence tracks were produced by MACS2. The Irreproducible Discovery Rate (IDR) peak calls were produced by the idr program using a global IDR threshold of 0.05.

The datasets were obtained from the NCBI BioProject database under the accession number PRJNA397749.


Jacobs J, Atkins M, Davie K, Imrichova H, Romanelli L, Christiaens V, Hulselmans G, Potier D, Wouters J, Taskiran II, Paciello G, González-Blas CB, Koldere D, Aibar S, Halder G, Aerts S. The transcription factor Grainy head primes epithelial enhancers for spatiotemporal activation by displacing nucleosomes. Nat Genet. 2018 Jul;50(7):1011-1020.

Zhang Y, Liu T, Meyer CA, Eeckhoute J, Johnson DS, Bernstein BE, Nusbaum C, Myers RM, Brown M, Li W, Liu XS. Model-based analysis of ChIP-Seq (MACS). Genome Biol. 2008;9(9):R137.