TE Density Track Settings
RepeatMasker Transposon Density (1kb window, 100bp step size)   (All Repeats tracks)

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Track height: pixels (range: 11 to 110)
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Windowing function: Smoothing window:  pixels
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Data last updated at UCSC: 2014-10-24 16:37:13


This track shows the density of transposon fragments identified by RepeatMasker in a 1kb sliding window (100bp step size) using the RepBase Drosophila library.


Smit AFA, Hubley R, Green P. RepeatMasker Open-3.0. http://www.repeatmasker.org. 1996-2010.

Jurka J, Kapitonov VV, Pavlicek A, Klonowski P, Kohany O, Walichiewicz J. Repbase Update, a database of eukaryotic repetitive elements. Cytogenet Genome Res. 2005;110(1-4):462-7.