UCSC Genome Browser on D. melanogaster Aug. 2014 (BDGP Release 6 + ISO1 MT/dm6)
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chr4:310,210-310,221 12 bp.
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-   JASPAR TFBS
JASPAR2020 TFBS dm6
JASPAR2022 TFBS dm6
-   Mapping and Sequencing Tracks
Base Position
Chromosome Band
Gap
GC Percent
Assembly
INSDC
RefSeq Acc
Restr Enzymes
Short Match
Melting Temp.
RNASlider MFE
-   Transgenic Insertions
1M-8M Screens (R5)
9M Screen (R5)
GAA Screen
Chr4 Constructs
Landing Pad Lines (R5)
MiMIC Lines
+   Chromatin Domains
-   Genes and Gene Prediction Tracks
FlyBase Genes
FlyBase Exons
FlyBase CDS
FlyBase Pseudogenes
FlyBase Non-coding
Drosophila RefSeq Transcripts
piRNA Clusters (R5)
Pfam in RefSeq
UniProt
FlyBase 6.06 Genes
FlyBase 6.06 Proteins
FlyBase 6.06 Exons
FlyBase 6.06 CDS
FlyBase 6.06 Pseudogenes
FlyBase 6.06 Non-coding
+   ChIP Seq Tracks
-   ChIP-chip Tracks
Unique ChIP-chip Probes
Pausing Factors ChIP-chip (S2 Cells)
-   Wolbachia Tracks
wAna Alignments
wRi Alignments
wMel Alignments
Wolbachia Proteins
+   Expression and Regulation
-   MNase Tracks
MNase Accessibility (R5)
GAF RNAi MNase
GAF vs. LacZ RNAi MNase
NELF RNAi MNase
NELF RNAi vs. Mock MNase
MBT Embryos MNase
+   RNA Seq Tracks
+   Comparative Genomics
+   Variations
-   Repeats
Natural TE
Interrupted Rpts
Microsatellite
Simple Repeats
WM + SDust
RepeatMasker
TE Density
Combined Library
TransposonPSI
TANTAN
Tallymer
RepeatDetector
Inverted Repeats
-   Updated Transcriptome Tracks
Combined modENCODE RNA-Seq (Development)
Combined Splice Junctions (Development)
modENCODE RNA-Seq (Development)
Combined modENCODE RNA-Seq (Tissues)
Combined Splice Junctions (Tissues)
modENCODE RNA-Seq (Tissues)
Combined modENCODE RNA-Seq (Cell Lines)
Combined Splice Junctions (Cell Lines)
modENCODE RNA-Seq (Cell Lines)
Combined RAMPAGE Embryos TSS
TSRchitect RAMPAGE Embryos TSS
TSRchitect Combined RAMPAGE TSS (Replicate 1)
TSRchitect RAMPAGE TSS Read Density (Replicate 1)
TSRchitect Combined RAMPAGE TSS (Replicate 2)
TSRchitect RAMPAGE TSS Read Density (Replicate 2)
       
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