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The UCSC Genome Browser provides a rapid and reliable display of any requested portion of any genome assembly at any scale, together with dozens of aligned annotation tracks (genes, mRNAs, CpG islands, regulation, variation, repeats, and more). The Genome Browser stacks annotation tracks beneath genome coordinate positions, allowing rapid visual correlation of different types of information. The user can look at a whole chromosome to get a feel for gene density, open a specific cytogenetic band to see a positionally mapped disease gene candidate, or zoom in to a particular gene to view its spliced ESTs and possible alternative splicing. The Genome Browser itself does not draw conclusions; rather, it collates all relevant information in one location, leaving the exploration and interpretation to the user. For more information on using the UCSC Genome Browser please see our help and training pages.
This page lists both whole-genome assembly browsers that are available for immediate viewing, and assemblies that are not currently available but can be requested.
We are working on adding a search function to this page. To search this page: Use the "find" feature of your Browser (commonly CTRL+F).
After searching the page, if you do not find the assembly you are interested in, you may request it using the "Can't find your assembly?" button at the top of the page. Complete the request form (including the NCBI GenBank or RefSeq assembly accession identifier). You will be notified by email when your assembly is available for viewing in the UCSC Genome Browser. This can take up to three weeks. The assembly browser will include the following annotation tracks: Assembly mapping, Base position, Gaps, GC Percent, Restriction Enzymes, Tandem Duplications, CpG Islands, RefSeq mRNAs, Repeat Masking, and, if available: NCBI RefSeq Genes and Ensembl Genes.
This page is optimized for use in Firefox and Safari.
For more details on using this page, please see this blog post.
view/request ⓘ'view' opens the genome browser for an existing assembly, 'request' opens an assembly request form. |
English common name ⓘEnglish common name |
scientific name (count) ⓘLinks to Google image search. Count shows the number of assemblies available for this organism. |
NCBI Assembly ⓘLinks to NCBI resource record. |
assembly size ⓘNumber of nucleotides in the assembly. |
sequence count ⓘThe number of sequences in this assembly. |
scaffold N50 length (L50) ⓘN50 (L50) length. |
contig N50 length (L50) ⓘN50 (L50) length. |
IUCN ⓘLinks to IUCN Red List of Threatened Species (version 2021-3) CR - Critical / EN - Endangered / VU - Vulnerable |
NCBI taxID ⓘLinks to NCBI Taxonomy database. |
assembly date ⓘDate submitted to NCBI Assembly database. |
BioSample ⓘBioSample ID at NCBI. |
BioProject ⓘBioProject ID at NCBI. |
Assembly submitter ⓘPerson or group who submitted to NCBI Assembly database. |
clade ⓘClade of this organism. |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| human | Homo sapiens (1,136) | GCA_000002115.2_WGSA | 2,863,645,671 | 4,558 | 29.13M (33) | 23.35K (34,009) | 9606 | 2004-02-25 | SAMN02981219 | PRJNA1431 | Celera Genomics | primates | ||
| human | Homo sapiens (1,136) | GCA_000002125.2_HuRef | 2,844,000,504 | 3,134 | 17.66M (48) | 108.43K (7,164) | 9606 | 2007-09-24 | SAMN02981236 | PRJNA19621 | J. Craig Venter Institute | primates | ||
| human | Homo sapiens (1,136) | GCA_000004845.2_YH_2.0 | 2,911,235,363 | 125,643 | 20.52M (39) | 20.52K (40,003) | 9606 | 2013-06-10 | SAMN00003318 | PRJNA42199 | Beijing Genomics Institute | primates | ||
| human | Homo sapiens (1,136) | GCA_000005465.1_BGIAF | 2,676,008,911 | 314,786 | 62.48K (11,689) | 887 (641,748) | 9606 | 2010-06-21 | PRJNA42201 | Beijing Genomics Institute | primates | |||
| view | T2T-CHM13 v2.0 | Homo sapiens (1,136) | GCA_009914755.4_T2T-CHM13v2.0 | 3,117,292,070 | 25 | 150.62M (9) | n/a | n/a | n/a | primates | ||||
| view | human HG002 paternal | Homo sapiens (1,136) | GCA_021950905.1_HG002.pat.cur.20211005 | 2,959,277,077 | 514 | 146.75M (8) | 9606 | 2022-02-04 | SAMN03283347 | PRJNA794172 | Human Pangenome Reference Consortium | primates | ||
| view | human HG002 maternal | Homo sapiens (1,136) | GCA_021951015.1_HG002.mat.cur.20211005 | 3,061,735,012 | 355 | 154.41M (8) | 9606 | 2022-02-04 | SAMN03283347 | PRJNA794175 | Human Pangenome Reference Consortium | primates | ||
| view | human | Homo sapiens (1,136) | GCF_000001405.39_GRCh38.p13 | 3,272,089,205 | 639 | 59.36M (17) | 56.41M (19) | 9606 | 2019-02-28 | PRJNA31257 | Genome Reference Consortium | primates | ||
| chimpanzee | Pan troglodytes (11) | GCA_000001515.5_Pan_tro_3.0 | 3,231,154,112 | 44,448 | 26.97M (38) | 384.82K (2,195) | EN | 9598 | 2016-05-03 | SAMN02981217 | PRJNA13184 | Chimpanzee Sequencing and Analysis Consortium | primates | |
| chimpanzee | Pan troglodytes (11) | GCA_000325845.1_ASM32584v1 | 2,733,948,177 | 361,864 | 15.70K (50,516) | EN | 9598 | 2003-12-05 | SAMN02981217 | PRJNA13184 | Chimpanzee Sequencing and Analysis Consortium | primates | ||
| view | chimpanzee | Pan troglodytes (11) | GCA_002880755.3_Clint_PTRv2 | 3,024,031,013 | 4,344 | 53.10M (19) | 12.42M (66) | EN | 9598 | 2018-01-19 | SAMN06272697 | PRJNA369439 | University of Washington | primates |
| view | chimpanzee | Pan troglodytes (11) | GCF_002880755.1_Clint_PTRv2/panTro6 | 3,050,398,082 | 4,346 | 53.10M (19) | 12.27M (67) | EN | 9598 | 2018-01-19 | SAMN06272697 | PRJNA369439 | University of Washington | primates |
| Sumatran orangutan | Pongo abelii (6) | GCA_000001545.3_P_pygmaeus_2.0.2 | 3,441,240,245 | 61,538 | 747.46K (1,057) | 15.81K (54,450) | CR | 9601 | 2008-11-13 | SAMN02981238 | PRJNA20869 | Orangutan Genome Sequencing Consortium | primates | |
| view | Sumatran orangutan | Pongo abelii (6) | GCA_002880775.3_Susie_PABv2 | 3,065,035,716 | 5,260 | 98.48M (13) | 11.07M (83) | CR | 9601 | 2018-01-19 | SAMN06275555 | PRJNA369439 | University of Washington | primates |
| view | Sumatran orangutan | Pongo abelii (6) | GCF_002880775.1_Susie_PABv2/ponAbe3 | 3,065,052,215 | 5,261 | 98.48M (13) | 11.07M (83) | CR | 9601 | 2018-01-19 | SAMN06275555 | PRJNA369439 | University of Washington | primates |
| Sumatran orangutan | Pongo abelii (6) | GCA_002880775.1_Susie_PAB_v0 | 3,042,566,910 | 5,764 | 11.27M (82) | CR | 9601 | 2018-1-16 | University of Washington | primates | ||||
| Sumatran orangutan | Pongo abelii (6) | GCA_002880775.2_Susie_PAB_v1 | 3,064,174,601 | 5,260 | 132.14M (10) | CR | 9601 | 2018-1-17 | University of Washington | primates | ||||
| Rhesus monkey | Macaca mulatta (17) | GCA_000002255.2_Mmul_051212 | 3,097,568,982 | 122,163 | 6.09M (135) | 25.71K (32,112) | 9544 | 2006-02-27 | SAMN02981228 | PRJNA12537 | Macaca mulatta Genome Sequencing Consortium | primates | ||
| view | Rhesus monkey | Macaca mulatta (17) | GCA_000230795.1_CR_1.0/rheMac3 | 2,969,971,616 | 34,102 | 1.66M (469) | 12.84K (57,139) | 9544 | 2011-10-19 | SAMN00113489 | PRJNA51409 | Beijing Genomics Institute | primates | |
| view | Rhesus monkey | Macaca mulatta (17) | GCA_000772875.3_Mmul_8.0.1 | 3,236,207,768 | 284,727 | 4.19M (202) | 107.17K (8,042) | 9544 | 2015-11-30 | PRJNA214746 | Baylor College of Medicine Genome Sequencing Center | primates | ||
| Rhesus monkey | Macaca mulatta (17) | GCA_003339765.3_Mmul_10 | 2,971,314,966 | 2,938 | 82.35M (14) | 46.61M (22) | 9544 | 2019-02-13 | SAMN09435472 | PRJNA476474 | The Genome Institute at Washington University School of Medicine | primates | ||
| Rhesus monkey | Macaca mulatta (17) | GCA_005453305.1_ASM545330v1 | 2,832,421,508 | 1,633 | 8.42M (102) | 9544 | 2019-05-16 | SAMN10580871 | PRJNA509445 | None | primates | |||
| view | Rhesus monkey | Macaca mulatta (17) | GCF_003339765.1_Mmul_10/rheMac10 | 2,971,331,530 | 2,939 | 145.68M (9) | 145.68M (9) | 9544 | 2019-02-13 | SAMN09435472 | PRJNA476474 | The Genome Institute at Washington University School of Medicine | primates | |
| white-tufted-ear marmoset | Callithrix jacchus (15) | GCA_000004665.1_Callithrix_jacchus-3.2 | 2,914,958,544 | 14,205 | 5.17M (148) | 29.27K (26,764) | 9483 | 2010-01-22 | SAMN02981242 | PRJNA20401 | Washington University (WashU) | primates | ||
| white-tufted-ear marmoset | Callithrix jacchus (15) | GCA_000832365.1_ASM83236v1 | 1,504,610,980 | 1,992,178 | 859 (582,242) | 9483 | 2015-01-29 | SAMN02770241 | PRJNA246742 | UN-NHPGC | primates | |||
| white-tufted-ear marmoset | Callithrix jacchus (15) | GCA_001269965.1_CIEA01 | 2,620,625,188 | 109,198 | 61.04K (12,010) | 9483 | 2015-08-07 | SAMD00031689 | PRJDB3965 | Department of Biosciences and Informatics, Keio University | primates | |||
| view | white-tufted-ear marmoset | Callithrix jacchus (15) | GCA_002754865.1_ASM275486v1 | 2,845,375,248 | 39,944 | 129.24M (9) | 155.28K (5,014) | 9483 | 2017-11-06 | SAMN07586072 | PRJNA401030 | Broad Institute | primates | |
| white-tufted-ear marmoset | Callithrix jacchus (15) | GCA_009663435.2_Callithrix_jacchus_cj1700_1.1 | 2,897,807,928 | 963 | 98.20M (12) | 25.23M (31) | 9483 | 2020-05-22 | PRJNA566173 | McDonnell Genome Institute at Washington University | primates | |||
| view | white-tufted-ear marmoset | Callithrix jacchus (15) | GCA_011078405.1_mCalJac1.mat | 2,811,151,840 | 216 | 146.90M (8) | 8.61M (89) | 9483 | 2020-03-10 | SAMN12368443 | PRJNA558086 | Vertebrate Genomes Project | primates | |
| view | white-tufted-ear marmoset | Callithrix jacchus (15) | GCF_009663435.1_Callithrix_jacchus_cj1700_1.1/calJac4 | 2,897,824,427 | 964 | 98.20M (12) | 25.23M (31) | 9483 | 2020-05-22 | PRJNA566173 | McDonnell Genome Institute at Washington University | primates | ||
| view | white-tufted-ear marmoset | Callithrix jacchus (15) | GCA_009663435.1_Callithrix_jacchus_cj1700_1.0 | 2,889,579,754 | 962 | 98.20M (12) | 25.23M (31) | 9483 | 2019-11-15 | McDonnell Genome Institute at Washington University | primates | |||
| view | white-tufted-ear marmoset | Callithrix jacchus (15) | GCA_011100535.1_mCalJac1.pat | 2,682,316,413 | 336 | 136.97M (8) | 14.65M (54) | 9483 | 2020-03-10 | Vertebrate Genomes Project | primates | |||
| view | white-tufted-ear marmoset | Callithrix jacchus (15) | GCA_011100555.1_mCalJac1.pat.X | 2,829,727,687 | 353 | 136.97M (9) | 13.26M (59) | 9483 | 2020-03-10 | Vertebrate Genomes Project | primates | |||
| view | white-tufted-ear marmoset | Callithrix jacchus (15) | GCF_000004665.1_Callithrix_jacchus-3.2/calJac3 | 2,914,958,544 | 14,205 | 5.17M (148) | 29.27K (26,764) | 9483 | 2010-01-22 | Washington University (WashU) | primates | |||
| view | northern white-cheeked gibbon | Nomascus leucogenys (6) | GCA_000146795.3_Nleu_3.0/nomLeu3 | 2,962,077,449 | 17,492 | 52.96M (21) | 35.15K (21,558) | CR | 61853 | 2012-12-08 | SAMN02981257 | PRJNA13975 | Gibbon Genome Sequencing Consortium | primates |
| northern white-cheeked gibbon | Nomascus leucogenys (6) | GCA_006542625.1_Asia_NLE_v1 | 2,843,966,406 | 2,251 | 35.89M (29) | 12.78M (72) | CR | 61853 | 2019-07-02 | SAMN11124083 | PRJNA369439 | University of Washington | primates | |
| view | northern white-cheeked gibbon | Nomascus leucogenys (6) | GCF_006542625.1_Asia_NLE_v1 | 2,843,982,884 | 2,252 | 35.89M (29) | 12.78M (72) | CR | 61853 | 2019-07-02 | SAMN11124083 | PRJNA369439 | University of Washington | primates |
| view | western lowland gorilla | Gorilla gorilla gorilla (9) | GCA_000151905.3_gorGor4/gorGor4 | 3,063,362,754 | 40,711 | 81.23M (15) | 52.93K (15,780) | CR | 9595 | 2014-12-19 | SAMEA2272491 | PRJEA31265 | Wellcome Trust Sanger Institute | primates |
| western lowland gorilla | Gorilla gorilla gorilla (9) | GCA_008122165.1_Kamilah_GGO_v0 | 3,044,855,802 | 5,485 | 26.12M (35) | 9.52M (74) | CR | 9595 | 2019-08-28 | SAMN11078986 | PRJNA369439 | University of Washington | primates | |
| view | western lowland gorilla | Gorilla gorilla gorilla (9) | GCA_900006655.3_Susie3 | 3,084,595,669 | 15,297 | 20.63M (42) | 9.41M (97) | CR | 9595 | 2016-12-22 | SAMEA3541598 | PRJEB10880 | UNIVERSITY OF WASHINGTON | primates |
| view | western lowland gorilla | Gorilla gorilla gorilla (9) | GCF_008122165.1_Kamilah_GGO_v0/gorGor6 | 3,044,872,214 | 5,486 | 26.12M (35) | 9.52M (74) | CR | 9595 | 2019-08-28 | SAMN11078986 | PRJNA369439 | University of Washington | primates |
| western lowland gorilla | Gorilla gorilla gorilla (9) | GCA_000151905.1_gorGor3.1 | 3,035,643,732 | 50,195 | 145.33M (9) | CR | 9595 | 2011-10-5 | Wellcome Trust Sanger Institute | primates | ||||
| Philippine tarsier | Carlito syrichta (2) | GCA_000164805.2_Tarsius_syrichta-2.0.1 | 3,453,847,770 | 337,188 | 401.18K (2,384) | 38.16K (23,500) | 1868482 | 2013-09-18 | SAMN02445010 | PRJNA20339 | Washington University (WashU) | primates | ||
| view | Philippine tarsier | Carlito syrichta (2) | GCF_000164805.1_Tarsius_syrichta-2.0.1/tarSyr2 | 3,453,864,774 | 337,189 | 401.18K (2,384) | 38.16K (23,500) | 1868482 | 2013-09-18 | SAMN02445010 | PRJNA20339 | Washington University (WashU) | primates | |
| view | gray mouse lemur | Microcebus murinus (5) | GCA_000165445.3_Mmur_3.0 | 2,487,392,024 | 7,677 | 108.17M (10) | 210.70K (2,987) | 30608 | 2017-02-06 | SAMN06275470 | PRJNA19967 | Baylor College of Medicine | primates | |
| view | gray mouse lemur | Microcebus murinus (5) | GCF_000165445.2_Mmur_3.0 | 2,487,409,138 | 7,678 | 108.17M (10) | 210.70K (2,987) | 30608 | 2017-02-06 | SAMN06275470 | PRJNA19967 | Baylor College of Medicine | primates | |
| view | gray mouse lemur | Microcebus murinus (5) | GCA_000165445.1_ASM16544v1/micMur1 | 2,902,270,736 | 185,042 | 140.88K (4,501) | 30608 | 2007-07-26 | primates | |||||
| gray mouse lemur | Microcebus murinus (5) | GCA_000165445.2_Mmur_2.0 | 2,438,804,424 | 10,311 | 3.71M (190) | 30608 | 2015-5-1 | Baylor College of Medicine and Broad Institute | primates | |||||
| view | gray mouse lemur | Microcebus murinus (5) | GCF_000165445.1_Mmur_2.0/micMur2 | 2,438,804,424 | 10,311 | 3.71M (190) | 30608 | 2015-5-1 | Baylor College of Medicine and Broad Institute | primates | ||||
| small-eared galago | Otolemur garnettii (3) | GCA_000181295.3_OtoGar3 | 2,519,724,550 | 7,793 | 13.85M (47) | 27.10K (21,631) | 30611 | 2011-03-16 | SAMN02981229 | PRJNA16955 | Broad Institute of MIT and Harvard, USA, Cambridge | primates | ||
| view | small-eared galago | Otolemur garnettii (3) | GCF_000181295.1_OtoGar3/otoGar3 | 2,519,724,550 | 7,793 | 13.85M (47) | 27.10K (21,631) | 30611 | 2011-03-16 | SAMN02981229 | PRJNA16955 | Broad Institute of MIT and Harvard, USA, Cambridge | primates | |
| crab-eating macaque | Macaca fascicularis (15) | GCA_000222185.1_MacFas_Jun2011 | 2,878,471,044 | 21 | 155.66M (8) | 3.66K (208,240) | VU | 9541 | 2011-07-23 | SAMEA2272428 | PRJEA48347 | F. Hoffmann-La Roche Ltd | primates | |
| crab-eating macaque | Macaca fascicularis (15) | GCA_000230815.1_CE_1.0 | 3,126,563,191 | 39,921 | 1.14M (707) | 13.21K (57,523) | VU | 9541 | 2011-10-19 | SAMN00116341 | PRJNA51411 | Beijing Genomics Institute | primates | |
| view | crab-eating macaque | Macaca fascicularis (15) | GCA_000364345.1_Macaca_fascicularis_5.0 | 2,946,827,162 | 7,600 | 88.65M (14) | 86.04K (9,296) | VU | 9541 | 2013-06-12 | SAMN00811240 | PRJNA20409 | Washington University (WashU) | primates |
| view | crab-eating macaque | Macaca fascicularis (15) | GCA_011100615.1_Macaca_fascicularis_6.0 | 2,906,138,557 | 936 | 150.38M (8) | 21.34M (43) | VU | 9541 | 2020-03-10 | SAMN14146612 | PRJNA607781 | Baylor College of Medicine Human Genome Sequencing Center | primates |
| crab-eating macaque | Macaca fascicularis (15) | GCA_012559485.3_MFA1912RKSv2 | 2,800,882,497 | 400 | 149.80M (8) | 26.25M (31) | VU | 9541 | 2021-10-26 | SAMD00204697 | PRJDB9269 | Keio University / RIKEN | primates | |
| view | crab-eating macaque | Macaca fascicularis (15) | GCF_012559485.2_MFA1912RKSv2 | 2,800,899,072 | 401 | 149.80M (8) | 26.25M (31) | VU | 9541 | 2021-10-26 | SAMD00204697 | PRJDB9269 | Keio University / RIKEN | primates |
| view | crab-eating macaque | Macaca fascicularis (15) | GCF_000364345.1_Macaca_fascicularis_5.0/macFas5 | 2,946,843,737 | 7,601 | 88.65M (14) | 86.04K (9,296) | VU | 9541 | 2013-06-12 | Washington University (WashU) | primates | ||
| view | Bolivian squirrel monkey | Saimiri boliviensis boliviensis (6) | GCA_000235385.1_SaiBol1.0/saiBol1 | 2,608,572,064 | 2,685 | 18.74M (39) | 38.82K (17,663) | 39432 | 2011-11-17 | SAMN02981369 | PRJNA67945 | Broad Institute | primates | |
| view | Bolivian squirrel monkey (100643 v2.1 BCM 2021) | Saimiri boliviensis boliviensis (6) | GCF_016699345.2_BCM_Sbol_2.1 | 2,650,941,540 | 1,713 | 87.24M (12) | n/a | n/a | n/a | primates | ||||
| Bolivian squirrel monkey | Saimiri boliviensis boliviensis (6) | GCA_016699345.1_BCM_Sbol_2.0 | 2,651,383,155 | 1,715 | 87.24M (12) | 4.86M (163) | 39432 | 2021-01-12 | SAMN16846876 | PRJNA679316 | Baylor College of Medicine Human Genome Sequencing Center | primates | ||
| view | Bolivian squirrel monkey | Saimiri boliviensis boliviensis (6) | GCF_016699345.1_BCM_Sbol_2.0 | 2,651,399,628 | 1,716 | 87.24M (12) | 4.86M (163) | 39432 | 2021-01-12 | SAMN16846876 | PRJNA679316 | Baylor College of Medicine Human Genome Sequencing Center | primates | |
| aye-aye | Daubentonia madagascariensis (3) | GCA_000241425.1_DauMad_1.0 | 2,855,365,987 | 3,231,305 | 3.65K (193,780) | 3.36K (209,974) | EN | 31869 | 2012-01-05 | SAMN00690380 | PRJNA74997 | Weill Cornell Medical College | primates | |
| view | aye-aye | Daubentonia madagascariensis (3) | GCA_004027145.1_DauMad_v1_BIUU | 2,498,418,007 | 342,451 | 379.92K (1,894) | 298.83K (2,426) | EN | 31869 | 2019-01-16 | SAMN07678077 | PRJNA399387 | Broad Institute | primates |
| view | pygmy chimpanzee | Pan paniscus (8) | GCA_000258655.2_panpan1.1 | 3,286,643,938 | 10,274 | 8.20M (94) | 66.68K (11,047) | EN | 9597 | 2015-08-18 | SAMEA1029457 | PRJNA49285 | Max-Planck Institute for Evolutionary Anthropology | primates |
| pygmy chimpanzee | Pan paniscus (8) | GCA_013052645.3_Mhudiblu_PPA_v2 | 3,203,531,224 | 5,411 | 53.39M (19) | 15.06M (53) | EN | 9597 | 2021-03-18 | SAMN11123633 | PRJNA526933 | University of Washington | primates | |
| view | pygmy chimpanzee | Pan paniscus (8) | GCF_013052645.1_Mhudiblu_PPA_v0/panPan3 | 3,051,901,337 | 4,293 | 68.25M (16) | 16.58M (48) | EN | 9597 | 2020-05-15 | SAMN11123633 | PRJNA526933 | University of Washington, University of Bari, Italy | primates |
| pygmy chimpanzee | Pan paniscus (8) | GCA_000258655.1_panpan1 | 2,869,190,113 | 10,867 | 10.12M (73) | EN | 9597 | 2012-4-24 | Max-Planck Institute for Evolutionary Anthropology | primates | ||||
| pygmy chimpanzee | Pan paniscus (8) | GCA_013052645.1_Mhudiblu_PPA_v0 | 3,051,884,774 | 4,292 | 68.25M (16) | 16.58M (48) | EN | 9597 | 2020-05-15 | University of Washington, University of Bari, Italy | primates | |||
| view | pygmy chimpanzee | Pan paniscus (8) | GCF_000258655.2_panpan1.1/panPan2 | 3,286,643,896 | 10,274 | 8.20M (94) | 66.68K (11,047) | EN | 9597 | 2015-08-18 | Max-Planck Institute for Evolutionary Anthropology | primates | ||
| view | olive baboon | Papio anubis (8) | GCA_000264685.2_Panu_3.0 | 2,959,356,508 | 63,234 | 585.72K (1,481) | 149.82K (5,418) | 9555 | 2017-04-20 | SAMN02981400 | PRJNA54005 | Human Genome Sequencing Center | primates | |
| view | olive baboon | Papio anubis (8) | GCF_008728515.1_Panubis1.0 | 2,869,821,163 | 11,145 | 140.27M (9) | 1.46M (545) | 9555 | 2019-10-02 | SAMN11179045 | PRJNA527874 | University of California, San Francisco | primates | |
| olive baboon | Papio anubis (8) | GCA_000264685.1_Panu_2.0 | 2,948,380,710 | 63,250 | 139.65M (9) | 9555 | 2012-6-5 | Baylor College of Medicine | primates | |||||
| olive baboon | Papio anubis (8) | GCA_008728515.1_Panubis1.0 | 2,869,804,647 | 11,144 | 140.27M (9) | 1.46M (545) | 9555 | 2019-10-02 | SAMN11179045 | PRJNA527874 | University of California, San Francisco | primates | ||
| view | olive baboon | Papio anubis (8) | GCF_000264685.3_Panu_3.0/papAnu4 | 2,959,373,024 | 63,235 | 585.72K (1,481) | 149.82K (5,418) | 9555 | 2017-04-20 | Human Genome Sequencing Center | primates | |||
| view | green monkey | Chlorocebus sabaeus (6) | GCA_000409795.2_Chlorocebus_sabeus_1.1 | 2,789,639,778 | 2,003 | 81.83M (14) | 90.45K (7,735) | 60711 | 2014-03-25 | SAMN01760484 | PRJNA168621 | Vervet Genomics Consortium | primates | |
| green monkey | Chlorocebus sabaeus (6) | GCA_015251995.1_Vero_WHO_a1.0 | 2,967,847,651 | 6,876 | 71.01M (12) | 760.69K (1,124) | 60711 | 2020-11-06 | SAMN15458746 | PRJNA644396 | Viral Vectors and Vaccines Bioprocessing Group, McGill University | primates | ||
| green monkey | Chlorocebus sabaeus (6) | GCA_015252025.1_Vero_WHO_p1.0 | 2,937,827,970 | 6,872 | 81.79M (12) | 839.65K (1,032) | 60711 | 2020-11-06 | SAMN15458746 | PRJNA644395 | Viral Vectors and Vaccines Bioprocessing Group, McGill University | primates | ||
| view | green monkey | Chlorocebus sabaeus (6) | GCF_015252025.1_Vero_WHO_p1.0 | 2,937,827,970 | 6,872 | 81.79M (12) | 839.65K (1,032) | 60711 | 2020-11-06 | SAMN15458746 | PRJNA644395 | Viral Vectors and Vaccines Bioprocessing Group, McGill University | primates | |
| view | green monkey | Chlorocebus sabaeus (6) | GCF_000409795.2_Chlorocebus_sabeus_1.1/chlSab2 | 2,789,656,328 | 2,004 | 81.83M (14) | 90.45K (7,735) | 60711 | 2014-03-25 | Vervet Genomics Consortium | primates | |||
| view | golden snub-nosed monkey | Rhinopithecus roxellana (4) | GCA_000769185.1_Rrox_v1 | 2,899,551,855 | 135,513 | 1.55M (533) | 77.15K (10,825) | EN | 61622 | 2014-10-28 | SAMN02427086 | PRJNA230020 | Novogene | primates |
| golden snub-nosed monkey | Rhinopithecus roxellana (4) | GCA_007565055.1_ASM756505v1 | 3,038,460,517 | 3,256 | 144.56M (9) | 5.72M (151) | EN | 61622 | 2019-07-29 | SAMN11039125 | PRJNA524949 | Northwest University | primates | |
| view | golden snub-nosed monkey | Rhinopithecus roxellana (4) | GCF_007565055.1_ASM756505v1 | 3,038,477,066 | 3,257 | 144.56M (9) | 5.72M (151) | EN | 61622 | 2019-07-29 | SAMN11039125 | PRJNA524949 | Northwest University | primates |
| view | golden snub-nosed monkey | Rhinopithecus roxellana (4) | GCF_000769185.1_Rrox_v1/rhiRox1 | 2,899,552,139 | 135,512 | 1.55M (533) | EN | 61622 | 2014-10-28 | Novogene | primates | |||
| view | proboscis monkey | Nasalis larvatus (2) | GCA_000772465.1_Charlie1.0/nasLar1 | 3,011,966,170 | 319,549 | 137.43M (9) | 13.29K (48,050) | EN | 43780 | 2014-11-10 | SAMN02689222 | PRJNA241312 | Proboscis Monkey Functional Genome Consortium | primates |
| view | proboscis monkey | Nasalis larvatus (2) | GCA_004027105.1_NasLar_v1_BIUU | 3,050,434,315 | 923,815 | 44.94K (18,488) | 34.53K (24,397) | EN | 43780 | 2019-01-16 | SAMN07678099 | PRJNA399408 | Broad Institute | primates |
| Angolan colobus | Colobus angolensis palliatus (2) | GCA_000951035.1_Cang.pa_1.0 | 2,970,124,662 | 13,124 | 7.84M (117) | 38.36K (19,355) | VU | 336983 | 2015-03-12 | SAMN03121814 | PRJNA251421 | Baylor College of Medicine | primates | |
| view | Angolan colobus | Colobus angolensis palliatus (2) | GCF_000951035.1_Cang.pa_1.0 | 2,970,124,662 | 13,124 | 7.84M (117) | 38.36K (19,355) | VU | 336983 | 2015-03-12 | SAMN03121814 | PRJNA251421 | Baylor College of Medicine | primates |
| drill | Mandrillus leucophaeus (3) | GCA_000951045.1_Mleu.le_1.0 | 3,061,992,840 | 12,821 | 3.19M (285) | 31.35K (23,469) | EN | 9568 | 2015-03-12 | SAMN03121813 | PRJNA251423 | Baylor College of Medicine | primates | |
| view | drill | Mandrillus leucophaeus (3) | GCF_000951045.1_Mleu.le_1.0 | 3,061,992,840 | 12,821 | 3.19M (285) | 31.35K (23,469) | EN | 9568 | 2015-03-12 | SAMN03121813 | PRJNA251423 | Baylor College of Medicine | primates |
| view | Ma's night monkey | Aotus nancymaae (4) | GCA_000952055.2_Anan_2.0 | 2,861,668,348 | 28,921 | 8.27M (102) | 126.46K (5,745) | VU | 37293 | 2017-06-09 | SAMN03121886 | PRJNA251539 | Baylor College of Medicine | primates |
| view | Ma's night monkey | Aotus nancymaae (4) | GCF_000952055.2_Anan_2.0 | 2,861,684,817 | 28,922 | 8.27M (102) | 126.46K (5,745) | VU | 37293 | 2017-06-09 | SAMN03121886 | PRJNA251539 | Baylor College of Medicine | primates |
| Ma's night monkey | Aotus nancymaae (4) | GCA_000952055.1_Anan_1.0 | 2,926,565,220 | 29,222 | 8.28M (103) | VU | 37293 | 2015-3-16 | Baylor College of Medicine | primates | ||||
| Ma's night monkey | Aotus nancymaae (4) | GCF_000952055.1_Anan_1.0 | 2,926,581,689 | 29,223 | 8.28M (103) | VU | 37293 | 2015-3-16 | Baylor College of Medicine | primates | ||||
| sooty mangabey | Cercocebus atys (2) | GCA_000955945.1_Caty_1.0 | 2,848,246,356 | 11,433 | 12.85M (66) | 112.94K (6,930) | VU | 9531 | 2015-03-19 | SAMN03379531 | PRJNA157077 | Human Genome Sequencing Center - BCM | primates | |
| view | sooty mangabey | Cercocebus atys (2) | GCF_000955945.1_Caty_1.0 | 2,848,246,356 | 11,433 | 12.85M (66) | 112.94K (6,930) | VU | 9531 | 2015-03-19 | SAMN03379531 | PRJNA157077 | Human Genome Sequencing Center - BCM | primates |
| pig-tailed macaque | Macaca nemestrina (2) | GCA_000956065.1_Mnem_1.0 | 2,948,703,511 | 9,733 | 15.22M (62) | 106.90K (7,388) | VU | 9545 | 2015-03-19 | SAMN03121842 | PRJNA251427 | Baylor College of Medicine | primates | |
| view | pig-tailed macaque | Macaca nemestrina (2) | GCF_000956065.1_Mnem_1.0 | 2,948,703,511 | 9,733 | 15.22M (62) | 106.90K (7,388) | VU | 9545 | 2015-03-19 | SAMN03121842 | PRJNA251427 | Baylor College of Medicine | primates |
| view | Coquerel's sifaka | Propithecus coquereli (2) | GCA_000956105.1_Pcoq_1.0 | 2,798,135,037 | 22,538 | 5.60M (149) | 28.13K (18,523) | CR | 379532 | 2015-03-23 | SAMN03121823 | PRJNA251429 | Baylor College of Medicine | primates |
| view | Coquerel's sifaka | Propithecus coquereli (2) | GCF_000956105.1_Pcoq_1.0 | 2,798,152,141 | 22,539 | 5.60M (149) | 28.13K (18,523) | CR | 379532 | 2015-03-23 | SAMN03121823 | PRJNA251429 | Baylor College of Medicine | primates |
| black lemur | Eulemur macaco | GCA_001262655.1_Emacaco_refEf_BWA_oneround | 2,119,875,225 | 26,772 | 405.99K (1,517) | 20.04K (30,877) | EN | 30602 | 2015-08-06 | SAMN03699689 | PRJNA284191 | University of Chicago | primates | |
| view | Sclater's lemur | Eulemur flavifrons | GCA_001262665.1_Eflavifronsk33QCA | 2,115,568,035 | 38,367 | 413.35K (1,495) | 27.33K (22,558) | CR | 87288 | 2015-08-06 | SAMN03699688 | PRJNA284191 | University of Chicago | primates |
| Panamanian white-faced capuchin | Cebus imitator (2) | GCA_001604975.1_Cebus_imitator-1.0 | 2,717,703,182 | 7,156 | 5.27M (149) | 41.20K (17,654) | VU | 2715852 | 2016-04-04 | SAMN04522148 | PRJNA298580 | McDonnell Genome Institute - Washington University School of Medicine | primates | |
| view | Panamanian white-faced capuchin | Cebus imitator (2) | GCF_001604975.1_Cebus_imitator-1.0 | 2,717,703,182 | 7,156 | 5.27M (149) | 41.20K (17,654) | VU | 2715852 | 2016-04-04 | SAMN04522148 | PRJNA298580 | McDonnell Genome Institute - Washington University School of Medicine | primates |
| view | black snub-nosed monkey (Rb0 v2 refseq 2016) | Rhinopithecus bieti (4) | GCF_001698545.2_ASM169854v2 | 2,975,791,396 | 103,882 | 2.23M (379) | EN | n/a | n/a | n/a | primates | |||
| view | black snub-nosed monkey | Rhinopithecus bieti (4) | GCA_001698545.1_ASM169854v1 | 2,977,058,395 | 105,031 | 2.23M (380) | 36.42K (21,992) | EN | 61621 | 2016-08-03 | SAMN02786331 | PRJNA315476 | Laboratory for conservation and utilization of Bio-resource | primates |
| view | black snub-nosed monkey | Rhinopithecus bieti (4) | GCF_001698545.1_ASM169854v1 | 2,977,074,946 | 105,032 | 2.23M (380) | 36.42K (21,993) | EN | 61621 | 2016-08-03 | SAMN02786331 | PRJNA315476 | Laboratory for conservation and utilization of Bio-resource | primates |
| view | Ugandan red Colobus (RC106 v4 2019) | Piliocolobus tephrosceles (8) | GCF_002776525.4_ASM277652v4 | 2,997,795,033 | 34,372 | 131.28M (9) | EN | n/a | n/a | n/a | primates | |||
| view | Ugandan red Colobus | Piliocolobus tephrosceles (8) | GCA_002776525.1_ASM277652v1 | 2,922,819,259 | 47,644 | 10.17M (82) | EN | 591936 | 2017-11-16 | University of Oregon | primates | |||
| Ugandan red Colobus | Piliocolobus tephrosceles (8) | GCA_002776525.2_ASM277652v2 | 3,038,007,327 | 47,449 | 13.53M (60) | 98.45K (8,493) | EN | 591936 | 2018-09-11 | University of Oregon | primates | |||
| Ugandan red Colobus | Piliocolobus tephrosceles (8) | GCA_002776525.3_ASM277652v3 | 3,037,997,551 | 46,654 | 131.28M (9) | 98.45K (8,493) | EN | 591936 | 2019-12-12 | SAMN07735529 | PRJNA413051 | University of Oregon | primates | |
| view | Ugandan red Colobus | Piliocolobus tephrosceles (8) | GCF_002776525.2_ASM277652v2 | 3,038,007,327 | 47,449 | 13.53M (60) | 98.45K (8,493) | EN | 591936 | 2018-09-11 | University of Oregon | primates | ||
| view | Ugandan red Colobus | Piliocolobus tephrosceles (8) | GCF_002776525.3_ASM277652v3 | 3,037,997,551 | 46,654 | 131.28M (9) | 98.45K (8,493) | EN | 591936 | 2019-12-12 | SAMN07735529 | PRJNA413051 | University of Oregon | primates |
| Japanese macaque | Macaca fuscata fuscata | GCA_003118495.1_macFus_1.0 | 2,930,706,173 | 90,905 | 94.91K (8,515) | 9543 | 2018-04-04 | SAMD00113013 | PRJDB6785 | National Institutes of Natural Sciences | primates | |||
| gelada | Theropithecus gelada (2) | GCA_003255815.1_Tgel_1.0 | 2,889,614,139 | 15,307 | 130.23M (9) | 310.06K (2,649) | 9565 | 2018-06-19 | SAMN09197221 | PRJNA470999 | Kenneth Chiou's shared submissions | primates | ||
| view | gelada | Theropithecus gelada (2) | GCF_003255815.1_Tgel_1.0 | 2,889,630,685 | 15,308 | 130.23M (9) | 130.23M (9) | 9565 | 2018-06-19 | SAMN09197221 | PRJNA470999 | Kenneth Chiou's shared submissions | primates | |
| greater bamboo lemur | Prolemur simus | GCA_003258685.1_Prosim_1.0 | 2,411,593,676 | 128,596 | 2.71M (251) | 47.76K (13,035) | CR | 1328070 | 2018-06-20 | SAMN05853041 | PRJNA344914 | Henry Doorly Zoo & Aquarium | primates | |
| view | Coquerel's mouse lemur | Mirza coquereli | GCA_004024645.1_MizCoq_v1_BIUU | 2,340,865,962 | 440,879 | 79.95K (7,587) | 60.60K (10,147) | EN | 47180 | 2019-01-15 | SAMN07678095 | PRJNA399404 | Broad Institute | primates |
| view | Ring-tailed lemur | Lemur catta (5) | GCA_004024665.1_LemCat_v1_BIUU | 2,298,449,872 | 575,427 | 215.72K (2,945) | 158.44K (4,091) | EN | 9447 | 2019-01-15 | SAMN07678092 | PRJNA399402 | Broad Institute | primates |
| Ring-tailed lemur | Lemur catta (5) | GCA_020740595.1_mLemCat1.alt | 2,266,570,666 | 312 | 35.38M (18) | 35.38M (18) | EN | 9447 | 2021-11-03 | SAMN12621102 | PRJNA561950 | Vertebrate Genomes Project | primates | |
| Ring-tailed lemur | Lemur catta (5) | GCA_020740605.1_mLemCat1.pri | 2,245,601,549 | 185 | 102.16M (9) | 32.53M (20) | EN | 9447 | 2021-11-04 | SAMN12621102 | PRJNA561949 | Vertebrate Genomes Project | primates | |
| view | ring-tailed lemur (2021 VGP) | Lemur catta (5) | GCF_020740605.2_mLemCat1.pri | 2,245,601,549 | 185 | 102.16M (9) | 32.53M (20) | EN | 9447 | 2021-11-04 | SAMN12621102 | PRJNA561949 | Vertebrate Genomes Project | primates |
| view | Lesser dwarf lemur | Cheirogaleus medius (2) | GCA_004024725.1_CheMed_v1_BIUU | 2,393,092,913 | 547,751 | 118.57K (5,555) | 90.92K (7,228) | VU | 9460 | 2019-01-15 | SAMN07678072 | PRJNA399382 | Broad Institute | primates |
| Lesser dwarf lemur | Cheirogaleus medius (2) | GCA_008086735.1_ASM808673v1 | 2,121,890,802 | 3,231 | 48.32M (14) | 34.91K (16,524) | VU | 9460 | 2019-08-26 | SAMN11334321 | PRJNA523575 | Duke University | primates | |
| view | black-handed spider monkey | Ateles geoffroyi (2) | GCA_004024785.1_AteGeo_v1_BIUU | 2,897,033,911 | 869,075 | 73.11K (10,626) | 59.03K (13,280) | EN | 9509 | 2019-01-15 | SAMN07678064 | PRJNA399374 | Broad Institute | primates |
| view | Red shanked douc langur | Pygathrix nemaeus | GCA_004024825.1_PygNem_v1_BIUU | 3,217,150,031 | 1,431,093 | 68.57K (12,661) | 51.43K (17,062) | CR | 54133 | 2019-01-15 | SAMN07678108 | PRJNA399415 | Broad Institute | primates |
| view | tamarin | Saguinus imperator | GCA_004024885.1_SagImp_v1_BIUU | 3,493,717,886 | 1,666,189 | 65.64K (12,800) | 53.79K (15,912) | 9491 | 2019-01-15 | SAMN07678110 | PRJNA399417 | Broad Institute | primates | |
| view | Hanuman langur | Semnopithecus entellus | GCA_004025065.1_SemEnt_v1_BIUU | 3,033,044,217 | 1,063,749 | 29.95K (26,553) | 25.06K (32,346) | 88029 | 2019-01-15 | SAMN07678111 | PRJNA399419 | Broad Institute | primates | |
| view | white-faced saki | Pithecia pithecia (2) | GCA_004026645.1_PitPit_v1_BIUU | 2,933,562,501 | 892,330 | 83.10K (9,847) | 63.29K (13,054) | 43777 | 2019-01-16 | SAMN07678106 | PRJNA399413 | Broad Institute | primates | |
| view | brown lemur | Eulemur fulvus | GCA_004027275.1_EulFul_v1_BIUU | 2,748,885,701 | 1,693,913 | 22.56K (29,528) | 21.31K (31,523) | VU | 13515 | 2019-01-16 | SAMN07678083 | PRJNA399393 | Broad Institute | primates |
| view | red guenon | Erythrocebus patas (2) | GCA_004027335.1_EryPat_v1_BIUU | 3,490,485,286 | 2,563,960 | 34.53K (24,602) | 28.52K (30,270) | 9538 | 2019-01-16 | SAMN07678082 | PRJNA399392 | Broad Institute | primates | |
| view | De Brazza's monkey | Cercopithecus neglectus | GCA_004027615.1_CertNeg_v1_BIUU | 3,278,860,052 | 2,119,200 | 10.27K (72,116) | 9.79K (78,262) | 36227 | 2019-01-16 | SAMN07678070 | PRJNA399380 | Broad Institute | primates | |
| view | Bolivian titi | Plecturocebus donacophilus | GCA_004027715.1_CalDon_v1_BIUU | 2,959,764,160 | 1,033,983 | 46.45K (17,301) | 41.15K (19,598) | 230833 | 2019-01-16 | SAMN07678140 | PRJNA399376 | Broad Institute | primates | |
| view | white-fronted capuchin | Cebus albifrons (2) | GCA_004027755.1_CebAlb_v1_BIUU | 3,058,667,321 | 1,539,166 | 31.16K (24,368) | 25.65K (30,235) | 9514 | 2019-01-16 | SAMN07678068 | PRJNA399379 | Broad Institute | primates | |
| view | slow loris | Nycticebus coucang | GCA_004027815.1_NycCou_v1_BIUU | 3,294,558,825 | 1,937,143 | 19.72K (40,005) | 17.69K (45,566) | EN | 9470 | 2019-01-16 | SAMN07678100 | PRJNA399409 | Broad Institute | primates |
| view | mantled howler monkey | Alouatta palliata | GCA_004027835.1_AloPal_v1_BIUU | 3,033,617,595 | 1,136,565 | 72.43K (11,068) | 51.30K (15,704) | VU | 30589 | 2019-01-16 | SAMN07678036 | PRJNA399372 | Broad Institute | primates |
| view | primates | Indri indri | GCA_004363605.1_IndInd_v1_BIUU | 2,701,849,413 | 1,243,540 | 28.62K (20,823) | 26.45K (23,599) | CR | 34827 | 2019-03-22 | SAMN07678091 | PRJNA399458 | Broad Institute | primates |
| mandrill | Mandrillus sphinx (2) | GCA_004802615.1_BGI_mandrill_1.0 | 2,860,576,561 | 53,550 | 3.58M (238) | 21.68K (38,391) | VU | 9561 | 2019-04-22 | SAMN08634632 | PRJNA436891 | BGI | primates | |
| primates | Mirza zaza | GCA_008750895.1_Mzaz_1.0 | 2,359,344,610 | 141,930 | 75.84K (8,667) | 73.50K (8,895) | VU | 339999 | 2019-09-30 | SAMN10707785 | PRJNA512515 | Duke University | primates | |
| primates | Microcebus sp. 3 GT-2019 | GCA_008750915.1_Mjon_1.0 | 2,499,225,679 | 243,425 | 38.97K (18,265) | 38.13K (18,681) | 2508170 | 2019-09-30 | SAMN10707783 | PRJNA512515 | Duke University | primates | ||
| primates | Microcebus tavaratra | GCA_008750935.1_Mtav_1.0 | 2,583,971,501 | 346,080 | 30.04K (23,924) | 29.53K (24,344) | VU | 143351 | 2019-09-30 | SAMN10707784 | PRJNA512515 | Duke University | primates | |
| Mittermeier's mouse lemur | Microcebus mittermeieri | GCA_008750955.1_Mmit_1.0 | 3,012,906,786 | 519,779 | 15.31K (53,349) | 15.31K (53,349) | EN | 236274 | 2019-09-30 | SAMN10707781 | PRJNA512515 | Duke University | primates | |
| primates | Microcebus ravelobensis | GCA_008750975.1_Mrav_1.0 | 2,416,211,825 | 334,018 | 21.50K (30,802) | 21.47K (30,828) | VU | 122231 | 2019-09-30 | SAMN10707782 | PRJNA512515 | Duke University | primates | |
| primates | Microcebus griseorufus | GCA_008750995.1_Mgri_1.0 | 2,838,334,889 | 479,880 | 16.82K (45,866) | 16.65K (46,304) | 143354 | 2019-09-30 | SAMN10707780 | PRJNA512515 | Duke University | primates | ||
| tufted capuchin | Sapajus apella (4) | GCA_009761245.1_GSC_monkey_1.0 | 2,729,201,088 | 17,902 | 23.74M (35) | 144.04K (5,265) | 9515 | 2019-12-17 | SAMN13265339 | PRJNA588076 | Canada's Genomic Enterprise | primates | ||
| view | tufted capuchin | Sapajus apella (4) | GCF_009761245.1_GSC_monkey_1.0 | 2,729,201,088 | 17,902 | 23.74M (35) | 144.04K (5,265) | 9515 | 2019-12-17 | SAMN13265339 | PRJNA588076 | Canada's Genomic Enterprise | primates | |
| Francois's langur | Trachypithecus francoisi (3) | GCA_009764315.1_Tfra_2.0 | 2,875,554,650 | 1,015 | 130.98M (10) | 16.18M (52) | EN | 54180 | 2019-12-18 | SAMN12630612 | PRJNA488530 | INSTITUTE OF ZOOLOGY, CHINESE ACADEMY OF SCIENCES | primates | |
| Francois's langur | Trachypithecus francoisi (3) | GCA_009764325.1_Trachy_franco_1.0 | 2,902,133,109 | 4,447 | 2.82M (300) | 342.65K (2,422) | EN | 54180 | 2019-12-18 | SAMN09940942 | PRJNA488530 | INSTITUTE OF ZOOLOGY, CHINESE ACADEMY OF SCIENCES | primates | |
| view | Francois's langur | Trachypithecus francoisi (3) | GCF_009764315.1_Tfra_2.0 | 2,875,571,204 | 1,016 | 130.98M (10) | 16.18M (52) | EN | 54180 | 2019-12-18 | SAMN12630612 | PRJNA488530 | INSTITUTE OF ZOOLOGY, CHINESE ACADEMY OF SCIENCES | primates |
| silvery gibbon | Hylobates moloch (5) | GCA_009828535.3_HMol_V3 | 2,848,339,960 | 18,400 | 125.20M (9) | 265.82K (2,986) | EN | 81572 | 2021-11-10 | SAMN12851060 | PRJNA575281 | University of California, Santa Cruz | primates | |
| view | silvery gibbon | Hylobates moloch (5) | GCF_009828535.2_HMol_V2 | 2,848,329,432 | 18,395 | 125.20M (9) | 265.82K (2,986) | EN | 81572 | 2020-02-13 | SAMN12851060 | PRJNA575281 | University of California, Santa Cruz | primates |
| silvery gibbon | Hylobates moloch (5) | GCA_009828535.1_HMol | 2,340,344,434 | 18,393 | 107.69M (8) | 276.96K (2,400) | EN | 81572 | 2020-01-03 | University of California, Santa Cruz | primates | |||
| silvery gibbon | Hylobates moloch (5) | GCA_009828535.2_HMol_V2 | 2,848,345,933 | 18,396 | 125.20M (9) | 265.82K (2,986) | EN | 81572 | 2020-02-13 | University of California, Santa Cruz | primates | |||
| view | silvery gibbon | Hylobates moloch (5) | GCF_009828535.1_HMol | 2,340,327,933 | 18,392 | 107.69M (8) | 276.96K (2,400) | EN | 81572 | 2020-01-03 | University of California, Santa Cruz | primates | ||
| Mona monkey | Cercopithecus mona | GCA_014849445.1_KIZ_CMon_1.0 | 2,902,804,697 | 1,889 | 22.79M (36) | 22.79M (36) | 36226 | 2020-10-05 | SAMN13555793 | PRJNA595456 | Kunming Institute of Zoology, Chinese Academy of Sciences | primates | ||
| brown spider monkey | Ateles hybridus | GCA_916098195.1_ORGONE_01 | 2,643,274,663 | 1,300 | 50.52M (16) | 50.52M (16) | CR | 129801 | 2021-09-22 | SAMEA8994840 | PRJEB46485 | IBE (Institut de Biologia Evolutiva)) | primates | |
| house mouse | Mus musculus (48) | GCA_000001635.9_GRCm39 | 2,728,222,451 | 61 | 109.68M (10) | 59.46M (15) | 10090 | 2020-06-24 | PRJNA20689 | Genome Reference Consortium | mammals | |||
| house mouse | Mus musculus (48) | GCA_000002165.1_Mm_Celera | 3,251,246,261 | 668,009 | 23.25M (34) | 21.69K (35,732) | 10090 | 2009-03-04 | SAMN03004379 | PRJNA11785 | Celera Genomics | mammals | ||
| house mouse | Mus musculus (48) | GCA_000181195.1_ASM18119v1 | 2,477,636,994 | 224,713 | 24.82K (29,731) | 10090 | 2002-05-15 | SAMEA3138312 | PRJNA13183 | Mouse Genome Sequencing Consortium | mammals | |||
| house mouse | Mus musculus (48) | GCA_000185105.2_MmusALLPATHS2 | 2,505,015,129 | 2,314 | 18.92M (40) | 19.50K (35,205) | 10090 | 2012-08-29 | SAMN02981292 | PRJNA59879 | Broad Institute | mammals | ||
| house mouse | Mus musculus (48) | GCA_000185125.1_MmusSOAP1 | 2,561,486,811 | 41,268 | 357.13K (1,917) | 15.78K (41,104) | 10090 | 2011-01-06 | SAMN02981292 | PRJNA59879 | Broad Institute | mammals | ||
| view | house mouse | Mus musculus (48) | GCA_001624185.1_129S1_SvImJ_v1 | 2,732,673,693 | 7,154 | 134.54M (9) | 14.24K (47,135) | 10090 | 2016-04-26 | SAMN04489811 | PRJNA310854 | Wellcome Trust Sanger Institute | mammals | |
| view | house mouse | Mus musculus (48) | GCA_001624215.1_A_J_v1 | 2,629,995,394 | 4,688 | 129.07M (9) | 19.04K (34,118) | 10090 | 2016-04-26 | SAMN04489813 | PRJNA310854 | Wellcome Trust Sanger Institute | mammals | |
| view | house mouse | Mus musculus (48) | GCA_001624295.1_AKR_J_v1 | 2,712,707,555 | 5,953 | 132.98M (9) | 23.04K (29,369) | 10090 | 2016-04-26 | SAMN04489815 | PRJNA310854 | Wellcome Trust Sanger Institute | mammals | |
| view | house mouse | Mus musculus (48) | GCA_001624475.1_CBA_J_v1 | 2,921,727,955 | 5,466 | 144.78M (9) | 13.07K (50,549) | 10090 | 2016-04-26 | SAMN04489823 | PRJNA310854 | Wellcome Trust Sanger Institute | mammals | |
| view | house mouse | Mus musculus (48) | GCA_001624505.1_DBA_2J_v1 | 2,606,162,158 | 4,105 | 128.21M (9) | 13.12K (49,604) | 10090 | 2016-04-26 | SAMN04489824 | PRJNA310854 | Wellcome Trust Sanger Institute | mammals | |
| view | house mouse | Mus musculus (48) | GCA_001624535.1_FVB_NJ_v1 | 2,588,619,290 | 5,013 | 127.06M (9) | 15.80K (42,623) | 10090 | 2016-04-26 | SAMN04489825 | PRJNA310854 | Wellcome Trust Sanger Institute | mammals | |
| view | house mouse | Mus musculus (48) | GCA_001624675.1_NOD_ShiLtJ_v1 | 2,982,063,250 | 5,544 | 147.35M (9) | 9.44K (65,273) | 10090 | 2016-04-26 | SAMN04489827 | PRJNA310854 | Wellcome Trust Sanger Institute | mammals | |
| view | house mouse | Mus musculus (48) | GCA_001624745.1_NZO_HlLtJ_v1 | 2,699,267,296 | 7,022 | 132.96M (9) | 16.51K (41,197) | 10090 | 2016-04-26 | SAMN04489828 | PRJNA310854 | Wellcome Trust Sanger Institute | mammals | |
| view | house mouse | Mus musculus (48) | GCA_001632525.1_BALB_cJ_v1 | 2,627,344,254 | 3,825 | 129.64M (9) | 16.20K (41,479) | 10090 | 2016-05-09 | SAMN04489816 | PRJNA310854 | Wellcome Trust Sanger Institute | mammals | |
| view | house mouse | Mus musculus (48) | GCA_001632555.1_C57BL_6NJ_v1 | 2,806,800,287 | 3,894 | 139.12M (9) | 12.71K (52,351) | 10090 | 2016-05-09 | SAMN04489821 | PRJNA310854 | Wellcome Trust Sanger Institute | mammals | |
| view | house mouse | Mus musculus (48) | GCA_001632575.1_C3H_HeJ_v1 | 2,701,131,316 | 4,069 | 133.07M (9) | 14.54K (46,362) | 10090 | 2016-05-09 | SAMN04489818 | PRJNA310854 | Wellcome Trust Sanger Institute | mammals | |
| view | house mouse | Mus musculus (48) | GCA_001632615.1_LP_J_v1 | 2,730,798,503 | 3,499 | 135.16M (9) | 12.61K (52,309) | 10090 | 2016-05-09 | SAMN04489826 | PRJNA310854 | Wellcome Trust Sanger Institute | mammals | |
| view | house mouse | Mus musculus (48) | GCF_000001635.27_GRCm39/mm39 | 2,728,222,451 | 61 | 109.68M (10) | 59.46M (15) | 10090 | 2020-06-24 | PRJNA20689 | Genome Reference Consortium | mammals | ||
| view | house mouse | Mus musculus (48) | GCF_000001635.26_GRCm38.p6/mm10 | 2,818,974,548 | 239 | 52.59M (18) | 32.27M (26) | 10090 | 2017-09-15 | Genome Reference Consortium | mammals | |||
| view | Norway rat | Rattus norvegicus (12) | GCA_000001895.4_Rnor_6.0/rn6 | 2,870,184,193 | 955 | 14.99M (65) | 100.51K (7,346) | 10116 | 2014-07-01 | SAMN02808228 | PRJNA10629 | Rat Genome Sequencing Consortium | mammals | |
| Norway rat | Rattus norvegicus (12) | GCA_000002265.1_Rn_Celera | 2,931,643,592 | 392,058 | 25.21M (35) | 34.56K (22,766) | 10116 | 2006-12-06 | SAMN03000701 | PRJNA13999 | Celera Genomics | mammals | ||
| view | Norway rat | Rattus norvegicus (12) | GCA_015227675.2_mRatBN7.2 | 2,647,915,728 | 176 | 135.01M (8) | 29.20M (27) | 10116 | 2020-11-10 | SAMN16261960 | PRJNA662791 | Wellcome Sanger Institute | mammals | |
| view | Norway rat | Rattus norvegicus (12) | GCA_015244455.1_mRatBN7.1_alternate_haplotype | 286,931,382 | 3,156 | 100.35K (1,117) | 100.34K (1,118) | 10116 | 2020-11-04 | SAMN16261960 | PRJNA663241 | Wellcome Sanger Institute | mammals | |
| view | Norway rat SHRSP/BppUtx 2022 | Rattus norvegicus (12) | GCA_021556685.1_UTH_Rnor_SHRSP_BbbUtx_1.0 | 2,907,517,304 | 2,734 | 138.88M (8) | 10116 | 2022-01-24 | SAMN24538170 | PRJNA793432 | Inbred Rat Genome Sequencing Project (UTH/UK/UofL) | mammals | ||
| view | Norway rat SHR/Utx RGD_8142385 2022 | Rattus norvegicus (12) | GCA_023515785.1_UTH_Rnor_SHR_Utx | 2,866,391,611 | 2,151 | 136.65M (8) | n/a | n/a | n/a | mammals | ||||
| view | Norway rat WKY/Bbb 2022 | Rattus norvegicus (12) | GCA_023515805.1_UTH_Rnor_WKY_Bbb_1.0 | 2,910,747,220 | 3,553 | 139.01M (8) | n/a | n/a | n/a | mammals | ||||
| view | Norway rat | Rattus norvegicus (12) | GCF_015227675.2_mRatBN7.2/rn7 | 2,647,915,728 | 176 | 135.01M (8) | 29.20M (27) | 10116 | 2020-11-10 | SAMN16261960 | PRJNA662791 | Wellcome Sanger Institute | mammals | |
| view | African savanna elephant | Loxodonta africana (2) | GCA_000001905.1_Loxafr3.0 | 3,196,738,035 | 2,352 | 46.40M (21) | 69.02K (13,607) | EN | 9785 | 2009-07-15 | SAMN02953622 | PRJNA12569 | Broad Institute | mammals |
| view | African savanna elephant | Loxodonta africana (2) | GCF_000001905.1_Loxafr3.0/loxAfr3 | 3,196,738,102 | 2,352 | 46.40M (21) | 69.02K (13,607) | EN | 9785 | 2009-07-15 | SAMN02953622 | PRJNA12569 | Broad Institute | mammals |
| view | platypus | Ornithorhynchus anatinus (11) | GCA_000002275.2_ASM227v2/ornAna2 | 1,996,809,494 | 201,524 | 991.61K (182) | 11.54K (39,591) | 9258 | 2007-02-14 | SAMN02953646 | PRJNA12885 | Washington University (WashU) | mammals | |
| platypus | Ornithorhynchus anatinus (11) | GCA_002966995.1_ASM296699v1 | 1,990,409,179 | 4,568 | 18.72M (31) | 7.58M (66) | 9258 | 2018-03-02 | SAMN08537700 | PRJNA433451 | BGI | mammals | ||
| view | platypus | Ornithorhynchus anatinus (11) | GCA_004115175.2_mOrnAna1.alt.v3 | 1,575,252,831 | 5,843 | 882.17K (510) | 882.17K (510) | 9258 | 2020-04-06 | SAMN08537700 | PRJNA489115 | Vertebrate Genomes Project | mammals | |
| platypus | Ornithorhynchus anatinus (11) | GCA_004115215.4_mOrnAna1.pri.v4 | 1,859,281,749 | 322 | 83.34M (7) | 15.15M (36) | 9258 | 2020-11-06 | SAMN08537700 | PRJNA489114 | Vertebrate Genomes Project | mammals | ||
| view | platypus | Ornithorhynchus anatinus (11) | GCF_004115215.2_mOrnAna1.pri.v4 | 1,859,281,927 | 322 | 83.34M (7) | 15.15M (36) | 9258 | 2020-11-06 | SAMN08537700 | PRJNA489114 | Vertebrate Genomes Project | mammals | |
| view | platypus | Ornithorhynchus anatinus (11) | GCA_004115215.3_mOrnAna1.pri.v3 | 1,859,281,749 | 322 | 83.34M (7) | 15.15M (36) | 9258 | 2020-04-13 | Vertebrate Genomes Project | mammals | |||
| view | platypus | Ornithorhynchus anatinus (11) | GCF_004115215.1_mOrnAna1.p.v1 | 1,858,552,590 | 305 | 83.34M (7) | 83.34M (7) | 9258 | 2019-02-07 | Vertebrate Genomes Project | mammals | |||
| dog | Canis lupus familiaris (24) | GCA_000002285.4_Dog10K_Boxer_Tasha | 2,312,802,206 | 147 | 63.74M (14) | 27.49M (31) | 9615 | 2020-10-06 | SAMN02953603 | PRJNA13179 | Dog Genome Sequencing Consortium | mammals | ||
| dog | Canis lupus familiaris (24) | GCA_000181415.1_ASM18141v1 | 1,517,481,071 | 1,089,636 | 1.52K (299,038) | 9615 | 2003-09-27 | SAMN03004377 | PRJNA10628 | TIGR | mammals | |||
| dog | Canis lupus familiaris (24) | GCA_000331495.1_Beagle | 2,254,627,151 | 221,474 | 21.83K (30,240) | 9615 | 2013-01-10 | SAMN01737209 | PRJNA176193 | GlaxoSmithKline | mammals | |||
| view | dog | Canis lupus familiaris (24) | GCA_004027395.1_CanFam_VD_v1_BIUU | 2,544,127,025 | 656,742 | 157.75K (4,443) | 100.14K (7,214) | 9615 | 2019-01-16 | SAMN07678141 | PRJNA399441 | Broad Institute | mammals | |
| dog | Canis lupus familiaris (24) | GCA_004886185.2_Basenji_breed-1.1 | 2,410,429,933 | 2,243 | 61.09M (16) | 3.13M (217) | 9615 | 2019-08-16 | SAMN10749847 | PRJNA512874 | University of Missouri | mammals | ||
| view | dog | Canis lupus familiaris (24) | GCF_000002285.5_Dog10K_Boxer_Tasha/canFam6 | 2,312,802,198 | 147 | 63.74M (14) | 27.49M (31) | 9615 | 2020-10-06 | SAMN02953603 | PRJNA13179 | Dog Genome Sequencing Consortium | mammals | |
| view | dog | Canis lupus familiaris (24) | GCF_014441545.1_ROS_Cfam_1.0 | 2,396,858,295 | 376 | 64.04M (15) | 12.02M (54) | 9615 | 2020-09-03 | SAMN14478636 | PRJNA615959 | The Roslin Institute | mammals | |
| view | dog | Canis lupus familiaris (24) | GCF_000002285.3_CanFam3.1/canFam3 | 2,410,976,875 | 3,268 | 45.88M (20) | 267.48K (2,436) | 9615 | 2011-11-02 | Dog Genome Sequencing Consortium | mammals | |||
| gray short-tailed opossum | Monodelphis domestica (2) | GCA_000002295.1_ASM229v1 | 3,600,487,649 | 5,137 | 527.95M (3) | 107.99K (9,459) | 13616 | 2007-01-25 | SAMN02953611 | PRJNA12561 | The Genome Sequencing Platform, The Genome Assembly Team | mammals | ||
| view | gray short-tailed opossum | Monodelphis domestica (2) | GCF_000002295.2_MonDom5 | 3,598,443,077 | 5,016 | 59.81M (18) | 108.01K (9,450) | 13616 | 2007-01-25 | SAMN02953611 | PRJNA12561 | The Genome Sequencing Platform, The Genome Assembly Team | mammals | |
| view | horse | Equus caballus (5) | GCA_000002305.1_EquCab2.0 | 2,474,912,402 | 9,636 | 46.75M (19) | 112.38K (6,246) | 9796 | 2007-10-29 | SAMN02953672 | PRJNA18661 | The Genome Assembly Team | mammals | |
| horse | Equus caballus (5) | GCA_000696655.1_Ajinai1.0 | 2,377,506,909 | 119,776 | 56.26K (11,603) | 40.74K (16,257) | 9796 | 2014-06-06 | SAMN02808397 | PRJNA200654 | College of Animal Science, Inner Mongolian Agricultural University, China | mammals | ||
| horse | Equus caballus (5) | GCA_002863925.1_EquCab3.0 | 2,506,949,475 | 4,700 | 87.23M (12) | 1.50M (462) | 9796 | 2018-01-05 | SAMN02953672 | PRJNA421018 | University of Louisville | mammals | ||
| view | horse | Equus caballus (5) | GCF_002863925.1_EquCab3.0/equCab3 | 2,506,966,135 | 4,701 | 87.23M (12) | 1.50M (462) | 9796 | 2018-01-05 | SAMN02953672 | PRJNA421018 | University of Louisville | mammals | |
| pig | Sus scrofa (29) | GCA_000003025.6_Sscrofa11.1 | 2,501,895,775 | 612 | 88.23M (9) | 48.23M (15) | 9823 | 2017-02-07 | SAMN02953785 | PRJNA13421 | The Swine Genome Sequencing Consortium (SGSC) | mammals | ||
| pig | Sus scrofa (29) | GCA_000325925.2_minipig_v1.0 | 2,508,912,457 | 137,577 | 5.85M (132) | 31.94K (22,565) | 9823 | 2015-03-18 | SAMN02953814 | PRJNA144099 | BGI-shenzhen | mammals | ||
| pig | Sus scrofa (29) | GCA_000331475.1_SscrofaMinipig | 2,358,017,222 | 231,585 | 22.01K (31,523) | 9823 | 2013-01-10 | SAMN01731602 | PRJNA176189 | GlaxoSmithKline | mammals | |||
| pig | Sus scrofa (29) | GCA_000472085.2_Tibetan_Pig_v2 | 2,437,742,524 | 72,068 | 861.88K (839) | 57.20K (11,378) | 9823 | 2016-08-08 | SAMN01894235 | PRJNA186497 | Novogene | mammals | ||
| pig | Sus scrofa (29) | GCA_001292865.1_ss10.2_mar2013 | 2,611,360,562 | 5,206 | 153.65M (7) | 17.26K (33,167) | 9823 | 2015-09-16 | SAMN03938573 | PRJNA291011 | F. Hoffmann - La Roche AG | mammals | ||
| view | pig | Sus scrofa (29) | GCA_002844635.1_USMARCv1.0 | 2,755,438,182 | 14,157 | 131.46M (9) | 6.37M (104) | 9823 | 2017-12-20 | SAMN07325927 | PRJNA392765 | USDA ARS | mammals | |
| view | pig | Sus scrofa (29) | GCF_000003025.6_Sscrofa11.1/susScr11 | 2,501,912,388 | 613 | 88.23M (9) | 48.23M (15) | 9823 | 2017-02-07 | SAMN02953785 | PRJNA13421 | The Swine Genome Sequencing Consortium (SGSC) | mammals | |
| cattle | Bos taurus (24) | GCA_000003055.5_Bos_taurus_UMD_3.1.1 | 2,670,123,310 | 3,143 | 6.38M (107) | 96.95K (7,930) | 9913 | 2014-11-25 | SAMN02898106 | PRJNA32899 | Center for Bioinformatics and Computational Biology, University of Maryland | mammals | ||
| view | cattle | Bos taurus (24) | GCA_000003205.6_Btau_5.0.1 | 2,724,980,740 | 3,143 | 6.81M (104) | 276.29K (2,849) | 9913 | 2015-11-19 | SAMN02898106 | PRJNA12555 | Cattle Genome Sequencing International Consortium | mammals | |
| view | cattle (Hereford L1 Dominette 01449 42190680 v3 2018 USDA) | Bos taurus (24) | GCF_002263795.2_ARS-UCD1.3 | 2,711,209,831 | 1,957 | 103.31M (12) | n/a | n/a | n/a | mammals | ||||
| view | cattle | Bos taurus (24) | GCF_002263795.1_ARS-UCD1.2/bosTau9 | 2,715,853,792 | 2,211 | 103.31M (12) | 25.90M (32) | 9913 | 2018-04-11 | SAMN03145444 | PRJNA391427 | USDA ARS | mammals | |
| view | domestic cat | Felis catus (13) | GCA_000003115.1_catChrV17e/felCat4 | 3,160,286,939 | 104,053 | 16.30M (47) | 4.58K (122,492) | 9685 | 2009-03-16 | SAMN03000705 | PRJNA32759 | NHGRI/Genome Technology Branch | mammals | |
| domestic cat | Felis catus (13) | GCA_000181335.5_Felis_catus_9.0 | 2,521,710,482 | 4,507 | 88.88M (11) | 41.92M (19) | 9685 | 2021-10-01 | SAMN02953640 | PRJNA16726 | Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine | mammals | ||
| domestic cat | Felis catus (13) | GCA_013340865.1_ASM1334086v1 | 2,493,141,643 | 20 | 151.11M (7) | 21.29M (32) | 9685 | 2020-06-03 | SAMD00228405 | PRJDB9879 | NIG | mammals | ||
| domestic cat | Felis catus (13) | GCA_016509815.2_Fcat_Pben_1.1_maternal_alt | 2,422,299,418 | 71 | 147.60M (7) | 83.88M (10) | 9685 | 2021-01-06 | SAMN16486447 | PRJNA670214 | Texas A&M University | mammals | ||
| domestic cat | Felis catus (13) | GCA_018350175.1_F.catus_Fca126_mat1.0 | 2,425,730,029 | 70 | 148.49M (7) | 90.73M (10) | 9685 | 2021-05-13 | SAMN19729387 | PRJNA684600 | Texas A&M University | mammals | ||
| view | domestic cat | Felis catus (13) | GCF_018350175.1_F.catus_Fca126_mat1.0 | 2,425,747,038 | 71 | 148.49M (7) | 90.73M (10) | 9685 | 2021-05-13 | SAMN19729387 | PRJNA684600 | Texas A&M University | mammals | |
| view | domestic cat | Felis catus (13) | GCF_000181335.3_Felis_catus_9.0/felCat9 | 2,521,863,845 | 4,508 | 83.97M (11) | 41.92M (19) | 9685 | 2017-11-20 | Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine | mammals | |||
| view | rabbit | Oryctolagus cuniculus (4) | GCA_000003625.1_OryCun2.0 | 2,737,473,256 | 3,241 | 35.97M (22) | 64.65K (12,076) | EN | 9986 | 2009-10-20 | SAMN02953624 | PRJNA12819 | The Broad Institute of MIT and Harvard | mammals |
| view | rabbit | Oryctolagus cuniculus (4) | GCA_009806435.2_UM_NZW_1.0 | 2,841,489,785 | 3,159 | 111.64M (10) | 337.73K (2,279) | EN | 9986 | 2021-02-04 | SAMN12179861 | PRJNA274594 | Shanghai Institutes for Biological Sciences | mammals |
| view | rabbit | Oryctolagus cuniculus (4) | GCF_000003625.3_OryCun2.0/oryCun2 | 2,737,462,810 | 3,241 | 35.97M (22) | 64.65K (12,076) | EN | 9986 | 2009-10-20 | SAMN02953624 | PRJNA12819 | The Broad Institute of MIT and Harvard | mammals |
| rabbit | Oryctolagus cuniculus (4) | GCA_009806435.1_UM_NZW_0.0 | 2,621,805,421 | 11,727 | 506.82K (1,339) | EN | 9986 | 2019-12-27 | Shanghai Institutes for Biological Sciences | mammals | ||||
| view | tammar wallaby | Notamacropus eugenii | GCA_000004035.1_Meug_1.1/macEug2 | 3,075,184,024 | 277,711 | 36.60K (24,533) | 2.60K (300,050) | 9315 | 2009-11-06 | PRJNA12587 | Tammar Wallaby Genome Sequencing Consortium | mammals | ||
| giant panda | Ailuropoda melanoleuca (8) | GCA_000004335.1_AilMel_1.0 | 2,299,492,210 | 81,466 | 1.28M (521) | 39.89K (16,105) | VU | 9646 | 2009-12-15 | SAMN00008160 | PRJNA38683 | Beijing Genomics Institute, Shenzhen | mammals | |
| view | giant panda (Jingjing v3 2020) | Ailuropoda melanoleuca (8) | GCF_002007445.2_ASM200744v3 | 2,440,277,323 | 73,514 | 129.25M (8) | VU | n/a | n/a | n/a | mammals | |||
| view | giant panda | Ailuropoda melanoleuca (8) | GCA_002007445.1_ASM200744v1 | 2,428,263,693 | 57,414 | 9.95M (75) | 128.60K (5,278) | VU | 9646 | 2017-02-28 | Institute of Zoology, Chinese Academy of Sciences | mammals | ||
| giant panda | Ailuropoda melanoleuca (8) | GCA_002007445.2_ASM200744v2 | 2,444,060,653 | 77,287 | 129.25M (8) | 127.38K (5,346) | VU | 9646 | 2020-04-20 | SAMN04193337 | PRJNA588422 | Institute of Zoology, Chinese Academy of Sciences | mammals | |
| view | giant panda | Ailuropoda melanoleuca (8) | GCF_000004335.2_AilMel_1.0/ailMel1 | 2,299,509,015 | 81,467 | 1.28M (521) | 39.89K (16,105) | VU | 9646 | 2009-12-15 | Beijing Genomics Institute, Shenzhen | mammals | ||
| view | giant panda | Ailuropoda melanoleuca (8) | GCF_002007445.1_ASM200744v2 | 2,444,077,458 | 77,288 | 129.25M (8) | 127.36K (5,347) | VU | 9646 | 2020-04-20 | SAMN04193337 | PRJNA588422 | Institute of Zoology, Chinese Academy of Sciences | mammals |
| view | sheep | Ovis aries (53) | GCA_000005525.1_Ovis_aries_1.0/oviAri1 | 2,860,496,367 | 1,217 | 34.09M (26) | 685 (545,770) | 9940 | 2010-02-25 | SAMN03004385 | PRJNA33937 | International Sheep Genomics Consortium | mammals | |
| view | sheep | Ovis aries (53) | GCA_000298735.2_Oar_v4.0 | 2,615,499,683 | 5,465 | 100.01M (8) | 150.47K (5,008) | 9940 | 2015-11-20 | SAMN00116405 | PRJNA169880 | International Sheep Genome Consortium | mammals | |
| sheep | Ovis aries (53) | GCA_002742125.1_Oar_rambouillet_v1.0 | 2,869,897,780 | 2,640 | 107.70M (8) | 2.57M (313) | 9940 | 2017-11-02 | SAMEA104496890 | PRJNA414087 | Baylor College of Medicine Human Genome Sequencing Center | mammals | ||
| sheep | Ovis aries (53) | GCA_011170295.1_ASM1117029v1 | 2,767,816,402 | 1,015 | 103.70M (8) | 8.70M (102) | 9940 | 2020-03-11 | SAMN13678651 | PRJNA597576 | Northwest A&F University | mammals | ||
| sheep | Ovis aries (53) | GCA_016772045.1_ARS-UI_Ramb_v2.0 | 2,628,146,906 | 142 | 101.27M (8) | 43.18M (24) | 9940 | 2021-02-03 | SAMN17575729 | PRJNA675594 | University of Idaho | mammals | ||
| view | sheep | Ovis aries (53) | GCF_016772045.1_ARS-UI_Ramb_v2.0 | 2,628,146,905 | 142 | 101.27M (8) | 43.18M (24) | 9940 | 2021-02-03 | SAMN17575729 | PRJNA675594 | University of Idaho | mammals | |
| little brown bat | Myotis lucifugus (2) | GCA_000147115.1_Myoluc2.0 | 2,034,575,300 | 11,654 | 4.29M (106) | 64.33K (8,574) | EN | 59463 | 2010-09-14 | SAMN02953645 | PRJNA16951 | Broad Institute | mammals | |
| view | little brown bat | Myotis lucifugus (2) | GCF_000147115.1_Myoluc2.0 | 2,034,575,300 | 11,654 | 4.29M (106) | 64.33K (8,574) | EN | 59463 | 2010-09-14 | SAMN02953645 | PRJNA16951 | Broad Institute | mammals |
| view | domestic guinea pig | Cavia porcellus (2) | GCA_000151735.1_Cavpor3.0 | 2,723,202,840 | 3,143 | 27.94M (28) | 80.58K (9,305) | 10141 | 2008-03-03 | SAMN02981223 | PRJNA12583 | The Genome Sequencing Platform, The Genome Assembly Team | mammals | |
| view | domestic guinea pig | Cavia porcellus (2) | GCF_000151735.1_Cavpor3.0/cavPor3 | 2,723,219,641 | 3,144 | 27.94M (28) | 80.58K (9,305) | 10141 | 2008-03-03 | SAMN02981223 | PRJNA12583 | The Genome Sequencing Platform, The Genome Assembly Team | mammals | |
| large flying fox | Pteropus vampyrus (3) | GCA_000151845.2_Pvam_2.0 | 2,198,284,804 | 36,094 | 5.95M (102) | 21.87K (22,949) | 132908 | 2014-12-05 | SAMN02894360 | PRJNA20325 | Baylor College of Medicine | mammals | ||
| view | large flying fox | Pteropus vampyrus (3) | GCF_000151845.1_Pvam_2.0 | 2,198,284,804 | 36,094 | 5.95M (102) | 21.87K (22,949) | 132908 | 2014-12-05 | SAMN02894360 | PRJNA20325 | Baylor College of Medicine | mammals | |
| view | large flying fox | Pteropus vampyrus (3) | GCA_000151845.1_Ptevap1.0/pteVam1 | 1,996,076,410 | 96,944 | 124.06K (4,438) | 132908 | 2008-10-6 | Baylor College of Medicine | mammals | ||||
| common bottlenose dolphin | Tursiops truncatus (14) | GCA_000151865.3_Ttru_1.4 | 2,551,401,796 | 240,557 | 116.29K (6,389) | 11.82K (57,664) | 9739 | 2012-01-02 | SAMN00000070 | PRJNA20367 | Baylor College of Medicine | mammals | ||
| view | common bottlenose dolphin | Tursiops truncatus (14) | GCA_001922835.1_NIST_Tur_tru_v1 | 2,132,499,883 | 2,647 | 26.56M (21) | 44.30K (13,811) | 9739 | 2016-12-28 | SAMN06114300 | PRJNA356464 | National Institute of Standards and Technology | mammals | |
| common bottlenose dolphin | Tursiops truncatus (14) | GCA_003314715.1_Tur_tru_Illumina_hap_v1 | 2,404,363,272 | 481 | 27.17M (30) | 30.98K (23,199) | 9739 | 2018-07-11 | SAMN09426418 | PRJNA476133 | Johns Hopkins University | mammals | ||
| common bottlenose dolphin | Tursiops truncatus (14) | GCA_003435595.3_Tur_tru_Illumina_phased_v1 | 4,816,480,726 | 97,787 | 781.59K (1,513) | 26.64K (51,565) | 9739 | 2018-11-02 | SAMN09426418 | PRJNA478376 | Johns Hopkins University | mammals | ||
| view | common bottlenose dolphin | Tursiops truncatus (14) | GCA_011762515.1_mTurTru1.pat | 2,378,995,196 | 1,166 | 87.97M (11) | 12.44M (55) | 9739 | 2020-03-25 | SAMN12326775 | PRJNA561884 | Vertebrate Genomes Project | mammals | |
| view | common bottlenose dolphin | Tursiops truncatus (14) | GCA_011762535.1_mTurTru1.mat | 2,385,753,970 | 985 | 93.92M (11) | 10.00M (72) | 9739 | 2020-03-25 | SAMN12326775 | PRJNA561885 | Vertebrate Genomes Project | mammals | |
| view | common bottlenose dolphin | Tursiops truncatus (14) | GCA_011762595.1_mTurTru1.mat.Y | 2,378,522,214 | 362 | 108.43M (9) | 9.73M (72) | 9739 | 2020-03-27 | SAMN12326775 | PRJNA608726 | Vertebrate Genomes Project | mammals | |
| view | common bottlenose dolphin | Tursiops truncatus (14) | GCF_011762595.1_mTurTru1.mat.Y | 2,378,522,213 | 362 | 108.43M (9) | 9.73M (72) | 9739 | 2020-03-27 | SAMN12326775 | PRJNA608726 | Vertebrate Genomes Project | mammals | |
| Ord's kangaroo rat | Dipodomys ordii (3) | GCA_000151885.2_Dord_2.0 | 2,236,368,823 | 65,193 | 11.93M (56) | 48.09K (11,373) | 10020 | 2014-12-12 | SAMN02900551 | PRJNA20385 | Baylor College of Medicine | mammals | ||
| view | Ord's kangaroo rat | Dipodomys ordii (3) | GCF_000151885.1_Dord_2.0 | 2,236,368,823 | 65,193 | 11.93M (56) | 48.09K (11,373) | 10020 | 2014-12-12 | SAMN02900551 | PRJNA20385 | Baylor College of Medicine | mammals | |
| view | Ord's kangaroo rat | Dipodomys ordii (3) | GCA_000151885.1_Dipord1.0/dipOrd1 | 2,158,502,098 | 210,053 | 36.43K (13,798) | 10020 | 2008-11-3 | Baylor College of Medicine | mammals | ||||
| Cape rock hyrax | Procavia capensis (4) | GCA_000152225.2_Pcap_2.0 | 3,602,182,911 | 65,694 | 905.83K (1,121) | 35.79K (23,371) | 9813 | 2014-12-16 | SAMN02894304 | PRJNA13972 | Baylor College of Medicine | mammals | ||
| Cape rock hyrax | Procavia capensis (4) | GCA_004026925.2_ProCapCap_v2_BIUU_UCD | 3,897,621,025 | 826,553 | 9.07M (110) | 38.09K (25,322) | 9813 | 2019-07-15 | SAMN07678107 | PRJNA399414 | Broad Institute | mammals | ||
| view | Cape rock hyrax | Procavia capensis (4) | GCA_000152225.1_Procap1.0/proCap1 | 2,985,258,999 | 295,006 | 24.30K (31,071) | 9813 | 2008-10-6 | Baylor College of Medicine | mammals | ||||
| view | Cape rock hyrax | Procavia capensis (4) | GCA_004026925.1_ProCapCap_v1_BIUU | 3,684,048,458 | 1,044,737 | 39.43K (24,105) | 9813 | 2019-1-16 | Broad Institute | mammals | ||||
| view | Hoffmann's two-fingered sloth | Choloepus hoffmanni (2) | GCA_000164785.2_C_hoffmanni-2.0.1 | 3,286,013,499 | 269,084 | 366.44K (2,423) | 64.49K (13,390) | 9358 | 2014-09-30 | SAMN02146716 | PRJNA30809 | The Genome Institute, Washington University School of Medicine | mammals | |
| view | Hoffmann's two-fingered sloth | Choloepus hoffmanni (2) | GCA_000164785.1_ChoHof1.0/choHof1 | 2,458,927,620 | 481,259 | 9.67K (69,135) | 9358 | 2008-11-06 | Broad Institute | mammals | ||||
| view | American pika | Ochotona princeps (5) | GCA_000164825.1_ASM16482v1/ochPri2 | 3,445,784,354 | 187,558 | 88.76K (8,868) | 3.27K (135,890) | 9978 | 2007-08-03 | SAMN03000703 | PRJNA19235 | Broad Institute | mammals | |
| view | American pika | Ochotona princeps (5) | GCA_000292845.1_OchPri3.0/ochPri3 | 2,229,824,103 | 10,420 | 26.86M (26) | 42.35K (12,477) | 9978 | 2012-08-27 | SAMN00767999 | PRJNA74593 | Broad Institute | mammals | |
| American pika | Ochotona princeps (5) | GCA_014633375.1_OchPri4.0 | 2,231,476,247 | 9,350 | 75.84M (11) | 42.12K (12,529) | 9978 | 2020-09-21 | SAMN15664588 | PRJNA649356 | University of British Columbia Okanagan | mammals | ||
| view | American pika | Ochotona princeps (5) | GCF_014633375.1_OchPri4.0 | 2,231,492,728 | 9,351 | 75.84M (11) | 42.12K (12,529) | 9978 | 2020-09-21 | SAMN15664588 | PRJNA649356 | University of British Columbia Okanagan | mammals | |
| view | alpaca (v3.2 Carlotta AHFN-0088 2019 Deakin U) | Vicugna pacos (8) | GCF_000164845.4_VicPac3.2 | 2,118,870,233 | 77,389 | 24.02M (25) | n/a | n/a | n/a | mammals | ||||
| alpaca | Vicugna pacos (8) | GCA_000164845.2_Vicugna_pacos-2.0.1 | 2,172,191,320 | 276,725 | 7.26M (86) | 30538 | 2013-3-13 | Washington University (WashU) | mammals | |||||
| alpaca | Vicugna pacos (8) | GCA_000164845.3_Vicugna_pacos-2.0.2 | 2,172,190,869 | 276,724 | 7.26M (86) | 24.62K (21,740) | 30538 | 2013-03-13 | Washington University (WashU) | mammals | ||||
| alpaca | Vicugna pacos (8) | GCA_000164845.4_VicPac3.1 | 2,119,600,897 | 77,389 | 24.02M (25) | 29.54K (18,008) | 30538 | 2019-07-15 | SAMN01096418 | PRJNA544883 | Deakin University | mammals | ||
| view | alpaca | Vicugna pacos (8) | GCF_000164845.3_VicPac3.1 | 2,119,617,549 | 77,390 | 24.02M (25) | 29.54K (18,008) | 30538 | 2019-07-15 | SAMN01096418 | PRJNA544883 | Deakin University | mammals | |
| water buffalo | Bubalus bubalis (11) | GCA_000180995.3_Bubalus_bubalis_Jaffrabadi_v3.0 | 3,759,980,894 | 117,845 | 102.34K (10,206) | 13.98K (68,156) | 89462 | 2018-02-22 | SAMN00004269 | PRJNA40113 | Anand Agricultural University, Anand, Gujarat, India | mammals | ||
| view | water buffalo | Bubalus bubalis (11) | GCA_000471725.1_UMD_CASPUR_WB_2.0 | 2,836,150,610 | 366,982 | 1.41M (581) | 21.94K (35,877) | 89462 | 2013-09-30 | SAMN02191888 | PRJNA207334 | University of Maryland | mammals | |
| water buffalo | Bubalus bubalis (11) | GCA_002993835.1_ASM299383v1 | 3,005,952,034 | 99,165 | 3.58M (241) | 14.57K (54,286) | 89462 | 2018-03-09 | SAMN03196556 | PRJNA267486 | Egyptian Water Buffalo Genome Consortium (Agriculture Genetic Engineering Research Institute and Nile University) | mammals | ||
| water buffalo | Bubalus bubalis (11) | GCA_003121395.1_UOA_WB_1 | 2,655,776,128 | 509 | 117.22M (9) | 22.44M (36) | 89462 | 2018-05-14 | SAMN08640746 | PRJNA437177 | University of Adelaide | mammals | ||
| water buffalo | Bubalus bubalis (11) | GCA_004794615.1_Bubbub1.0 | 2,770,260,352 | 33,821 | 6.96M (118) | 25.04K (31,353) | 89462 | 2019-04-15 | SAMN05935473 | PRJNA349106 | BGI-Shenzhen | mammals | ||
| view | water buffalo | Bubalus bubalis (11) | GCF_019923935.1_NDDB_SH_1 | 2,622,460,639 | 26 | 117.00M (9) | 9.59M (85) | 89462 | 2021-09-10 | SAMN11104991 | PRJNA525182 | National Dairy Development Board, India | mammals | |
| view | water buffalo | Bubalus bubalis (11) | GCF_003121395.1_ASM312139v1 | 2,655,780,776 | 509 | 117.22M (9) | 22.44M (36) | 89462 | 2018-05-14 | Italian Buffalo Genome Consortium | mammals | |||
| European shrew | Sorex araneus (2) | GCA_000181275.2_SorAra2.0 | 2,423,158,183 | 12,845 | 22.79M (36) | 22.62K (27,146) | 42254 | 2012-08-27 | SAMN00210854 | PRJNA13689 | Broad Institute | mammals | ||
| view | European shrew | Sorex araneus (2) | GCF_000181275.1_SorAra2.0/sorAra2 | 2,423,158,183 | 12,845 | 22.79M (36) | 22.62K (27,146) | 42254 | 2012-08-27 | SAMN00210854 | PRJNA13689 | Broad Institute | mammals | |
| thirteen-lined ground squirrel | Ictidomys tridecemlineatus (6) | GCA_000181315.1_ASM18131v1 | 1,913,367,893 | 797,481 | 2.75K (191,386) | 43179 | 2006-06-06 | SAMN03000702 | PRJNA13937 | The Genome Sequencing Platform, The Genome Assembly Team | mammals | |||
| thirteen-lined ground squirrel | Ictidomys tridecemlineatus (6) | GCA_000236235.1_SpeTri2.0 | 2,478,393,770 | 12,483 | 8.19M (80) | 44.14K (14,002) | 43179 | 2011-11-29 | SAMN00210855 | PRJNA61725 | Broad Institute | mammals | ||
| thirteen-lined ground squirrel | Ictidomys tridecemlineatus (6) | GCA_004006685.1_ASM400668v1 | 2,478,641,729 | 10,007 | 22.64M (33) | 44.13K (14,011) | 43179 | 2019-01-09 | SAMN08111062 | PRJNA420392 | 13-lined ground squirrel genome sequencing consortium | mammals | ||
| thirteen-lined ground squirrel | Ictidomys tridecemlineatus (6) | GCA_016881025.1_HiC_Itri_2 | 2,478,949,113 | 7,131 | 193.22M (6) | 44.13K (14,010) | 43179 | 2021-02-17 | SAMN08111062 | PRJNA647389 | Stanford University School of Medicine | mammals | ||
| view | thirteen-lined ground squirrel | Ictidomys tridecemlineatus (6) | GCF_016881025.1_HiC_Itri_2 | 2,478,965,571 | 7,132 | 193.22M (6) | 44.13K (14,010) | 43179 | 2021-02-17 | SAMN08111062 | PRJNA647389 | Stanford University School of Medicine | mammals | |
| view | thirteen-lined ground squirrel | Ictidomys tridecemlineatus (6) | GCF_000236235.1_SpeTri2.0/speTri2 | 2,478,393,770 | 12,483 | 8.19M (80) | 44.14K (14,002) | 43179 | 2011-11-29 | Broad Institute | mammals | |||
| northern tree shrew | Tupaia belangeri | GCA_000181375.1_ASM18137v1 | 2,137,225,476 | 841,006 | 2.97K (194,444) | 37347 | 2006-06-08 | SAMN03004381 | PRJNA13971 | Broad Institute | mammals | |||
| western European hedgehog | Erinaceus europaeus (3) | GCA_000181395.1_ASM18139v1 | 2,133,117,389 | 847,680 | 2.75K (193,540) | 9365 | 2006-02-17 | SAMN03004380 | PRJNA12576 | Broad Institute | mammals | |||
| view | western European hedgehog | Erinaceus europaeus (3) | GCA_000296755.1_EriEur2.0 | 2,715,703,478 | 5,802 | 3.26M (249) | 21.36K (31,119) | 9365 | 2012-09-19 | SAMN00760989 | PRJNA74585 | Broad Institute | mammals | |
| view | western European hedgehog | Erinaceus europaeus (3) | GCF_000296755.1_EriEur2.0/eriEur2 | 2,715,720,925 | 5,803 | 3.26M (249) | 21.36K (31,119) | 9365 | 2012-09-19 | SAMN00760989 | PRJNA74585 | Broad Institute | mammals | |
| Tasmanian devil | Sarcophilus harrisii (7) | GCA_000189315.1_Devil_ref_v7.0 | 3,174,693,010 | 35,974 | 1.85M (520) | 20.14K (44,681) | EN | 9305 | 2011-02-17 | SAMN02953780 | PRJNA51853 | Wellcome Trust Sanger Institute | mammals | |
| Tasmanian devil | Sarcophilus harrisii (7) | GCA_000219685.1_Devil_CABOG_asm.06 | 3,232,424,150 | 148,774 | 151.76K (5,238) | 11.03K (77,877) | EN | 9305 | 2011-06-30 | SAMN02953793 | PRJNA65325 | J. Craig Venter Institute | mammals | |
| Tasmanian devil | Sarcophilus harrisii (7) | GCA_007988765.1_SarHar_Dovetail_2.0 | 3,177,401,896 | 10,009 | 7.75M (129) | 20.12K (44,705) | EN | 9305 | 2019-08-12 | SAMN10407942 | PRJNA504904 | Washington State University | mammals | |
| Tasmanian devil | Sarcophilus harrisii (7) | GCA_902635505.1_mSarHar1.11 | 3,086,657,325 | 105 | 611.35M (3) | 62.34M (14) | EN | 9305 | 2019-11-07 | SAMEA6099886 | PRJEB35073 | SC | mammals | |
| Tasmanian devil | Sarcophilus harrisii (7) | GCA_902648505.1_mSarHar1.11_alternate_haplotype | 26,277,846 | 69 | 1.86M (6) | 115.08K (76) | EN | 9305 | 2019-11-12 | SAMEA6099886 | PRJEB35072 | SC | mammals | |
| view | Tasmanian devil | Sarcophilus harrisii (7) | GCF_902635505.1_mSarHar1.11 | 3,086,674,442 | 106 | 611.35M (3) | 62.34M (14) | EN | 9305 | 2019-11-07 | SAMEA6099886 | PRJEB35073 | SC | mammals |
| view | Tasmanian devil | Sarcophilus harrisii (7) | GCF_000189315.1_Devil_ref_v7.0/sarHar1 | 3,174,693,010 | 35,974 | 1.85M (520) | 20.14K (44,681) | EN | 9305 | 2011-02-17 | Wellcome Trust Sanger Institute | mammals | ||
| view | nine-banded armadillo | Dasypus novemcinctus (6) | GCA_000208655.2_Dasnov3.0 | 3,631,505,655 | 46,558 | 1.69M (568) | 26.28K (37,253) | 9361 | 2012-01-06 | SAMN02953623 | PRJNA12594 | Baylor College of Medicine | mammals | |
| view | nine-banded armadillo | Dasypus novemcinctus (6) | GCF_000208655.1_Dasnov3.0/dasNov3 | 3,631,522,711 | 46,559 | 1.69M (568) | 26.28K (37,253) | 9361 | 2012-01-06 | SAMN02953623 | PRJNA12594 | Baylor College of Medicine | mammals | |
| view | domestic ferret | Mustela putorius furo (19) | GCA_000215625.1_MusPutFur1.0/musFur1 | 2,410,863,155 | 7,782 | 9.34M (70) | 44.82K (14,471) | 9669 | 2011-06-02 | SAMN00149631 | PRJNA59869 | Ferret Genome Sequencing Consortium | mammals | |
| view | domestic ferret | Mustela putorius furo (19) | GCA_000239315.1_MusPutFurMale1.0 | 2,400,181,698 | 4,245 | 9.57M (72) | 66.75K (9,959) | 9669 | 2011-12-21 | SAMN00761641 | PRJNA78213 | Broad Institute | mammals | |
| domestic ferret | Mustela putorius furo (19) | GCA_009859125.1_ASM985912v1 | 2,458,519,527 | 902 | 24.28M (29) | 9669 | 2020-01-13 | SAMN13175626 | PRJNA580247 | JCVI | mammals | |||
| domestic ferret | Mustela putorius furo (19) | GCA_009859175.1_ASM985917v1 | 2,461,391,525 | 1,095 | 32.07M (23) | 9669 | 2020-01-13 | SAMN13175627 | PRJNA580247 | JCVI | mammals | |||
| domestic ferret | Mustela putorius furo (19) | GCA_009859215.1_ASM985921v1 | 2,459,857,180 | 1,004 | 30.83M (25) | 9669 | 2020-01-13 | SAMN13175628 | PRJNA580247 | JCVI | mammals | |||
| view | domestic ferret | Mustela putorius furo (19) | GCF_011764305.1_ASM1176430v1.1 | 2,577,107,489 | 1,224 | 23.60M (30) | 9669 | 2020-03-27 | SAMN13896405 | PRJNA580247 | JCVI | mammals | ||
| Chinese hamster | Cricetulus griseus (10) | GCA_000223135.1_CriGri_1.0 | 2,399,770,464 | 109,151 | 1.15M (547) | 39.36K (16,413) | 10029 | 2011-08-23 | SAMN02981352 | PRJNA69991 | Beijing Genomics Institute | mammals | ||
| view | Chinese hamster | Cricetulus griseus (10) | GCA_000419365.1_C_griseus_v1.0/criGri1 | 2,360,130,144 | 52,710 | 1.56M (450) | 27.13K (25,879) | 10029 | 2013-07-12 | SAMN02981459 | PRJNA167053 | Beijing Genomics Institution-shenzhen | mammals | |
| Chinese hamster | Cricetulus griseus (10) | GCA_000448345.1_Cgr1.0 | 2,332,774,290 | 28,749 | 1.24M (501) | 11.90K (50,649) | 10029 | 2013-08-29 | SAMN02981520 | PRJNA189319 | CeBiTec, Bielefeld University | mammals | ||
| Chinese hamster | Cricetulus griseus (10) | GCA_003668045.2_CriGri-PICRH-1.0 | 2,366,634,374 | 647 | 274.39M (4) | 2.71M (251) | 10029 | 2020-06-11 | SAMN07140313 | PRJNA389969 | CHO Genome Community | mammals | ||
| view | Chinese hamster | Cricetulus griseus (10) | GCA_900186095.1_CHOK1S_HZDv1/criGriChoV2 | 2,358,151,106 | 8,264 | 62.01M (12) | 97.13K (6,664) | 10029 | 2017-06-30 | SAMEA104116709 | PRJEB21211 | Eagle Genomics Ltd | mammals | |
| view | Chinese hamster | Cricetulus griseus (10) | GCF_000223135.1_CriGri_1.0/criGriChoV1 | 2,399,786,748 | 109,152 | 1.15M (547) | 39.36K (16,414) | 10029 | 2011-08-23 | SAMN02981352 | PRJNA69991 | Beijing Genomics Institute | mammals | |
| view | Chinese hamster | Cricetulus griseus (10) | GCF_003668045.3_CriGri-PICRH-1.0 | 2,366,634,374 | 647 | 274.39M (4) | 2.71M (251) | 10029 | 2020-06-11 | SAMN07140313 | PRJNA389969 | CHO Genome Community | mammals | |
| view | Chinese hamster | Cricetulus griseus (10) | GCF_003668045.1_CriGri-PICR | 2,368,906,908 | 1,830 | 19.58M (33) | 2.10M (306) | 10029 | 2018-10-21 | CHO Genome Community | mammals | |||
| view | naked mole-rat | Heterocephalus glaber (5) | GCA_000230445.1_HetGla_1.0/hetGla1 | 2,643,978,223 | 39,267 | 1.60M (502) | 21.75K (33,794) | 10181 | 2011-10-14 | SAMN00217190 | PRJNA68323 | Beijing Genomics Institute | mammals | |
| view | naked mole-rat | Heterocephalus glaber (5) | GCA_000247695.1_HetGla_female_1.0 | 2,618,188,253 | 4,228 | 20.53M (42) | 47.78K (13,149) | 10181 | 2012-02-17 | SAMN00714537 | PRJNA72441 | Broad Institute | mammals | |
| naked mole-rat | Heterocephalus glaber (5) | GCA_014060925.1_Heter_glaber.v1.7_hic_pac | 3,041,864,219 | 9,262 | 94.53M (13) | 61.52K (13,891) | 10181 | 2020-08-04 | SAMN10409247 | PRJNA505051 | Institute of Zoology, Chinese Academy of Sciences | mammals | ||
| view | naked mole-rat | Heterocephalus glaber (5) | GCF_000247695.1_HetGla_female_1.0/hetGla2 | 2,618,204,639 | 4,229 | 20.53M (42) | 47.78K (13,149) | 10181 | 2012-02-17 | SAMN00714537 | PRJNA72441 | Broad Institute | mammals | |
| view | Florida manatee | Trichechus manatus latirostris (2) | GCA_000243295.1_TriManLat1.0 | 3,103,791,524 | 6,322 | 14.44M (67) | 37.75K (21,972) | VU | 127582 | 2012-01-23 | SAMN00632092 | PRJNA68243 | Broad Institute | mammals |
| view | Florida manatee | Trichechus manatus latirostris (2) | GCF_000243295.1_TriManLat1.0/triMan1 | 3,103,808,406 | 6,323 | 14.44M (67) | 37.75K (21,972) | VU | 127582 | 2012-01-23 | SAMN00632092 | PRJNA68243 | Broad Institute | mammals |
| view | zebu cattle | Bos indicus (4) | GCA_000247795.2_Bos_indicus_1.0 | 2,673,949,103 | 31 | 106.31M (11) | 28.38K (25,226) | 9915 | 2014-11-25 | SAMN02953802 | PRJNA72827 | Genoa Biotecnologia SA | mammals | |
| zebu cattle | Bos indicus (4) | GCA_002933975.1_ASM293397v1 | 2,740,330,345 | 216,409 | 104.30M (12) | 64.50K (11,998) | 9915 | 2018-02-22 | SAMN08225763 | PRJNA427256 | Anand Agricultural University | mammals | ||
| view | zebu cattle | Bos indicus (4) | GCF_000247795.1_Bos_indicus_1.0 | 2,673,965,444 | 32 | 106.31M (11) | 28.38K (25,227) | 9915 | 2014-11-25 | SAMN02953802 | PRJNA72827 | Genoa Biotecnologia SA | mammals | |
| even-toed ungulates | Bos indicus (4) | GCA_000247795.1_Bos_indicus_1.0 | 2,475,812,658 | 253,769 | 28.38K (25,226) | 9915 | 2012-2-16 | Genoa Biotecnologia SA | mammals | |||||
| view | degu | Octodon degus (2) | GCA_000260255.1_OctDeg1.0 | 2,995,872,505 | 7,134 | 12.09M (77) | 19.85K (36,017) | 10160 | 2012-05-01 | SAMN00769067 | PRJNA74595 | Broad Institute | mammals | |
| view | degu | Octodon degus (2) | GCF_000260255.1_OctDeg1.0 | 2,995,889,303 | 7,135 | 12.09M (77) | 19.85K (36,018) | 10160 | 2012-05-01 | SAMN00769067 | PRJNA74595 | Broad Institute | mammals | |
| star-nosed mole | Condylura cristata (2) | GCA_000260355.1_ConCri1.0 | 1,769,662,895 | 2,040 | 55.52M (13) | 46.16K (10,590) | 143302 | 2012-05-01 | SAMN00727830 | PRJNA72447 | Broad Institute | mammals | ||
| view | star-nosed mole | Condylura cristata (2) | GCF_000260355.1_ConCri1.0 | 1,769,662,895 | 2,040 | 55.52M (13) | 46.16K (10,590) | 143302 | 2012-05-01 | SAMN00727830 | PRJNA72447 | Broad Institute | mammals | |
| long-tailed chinchilla | Chinchilla lanigera (2) | GCA_000276665.1_ChiLan1.0 | 2,390,852,391 | 2,838 | 21.89M (37) | 61.10K (10,854) | EN | 34839 | 2012-08-28 | SAMN00632093 | PRJNA68239 | Broad Institute | mammals | |
| view | long-tailed chinchilla | Chinchilla lanigera (2) | GCF_000276665.1_ChiLan1.0 | 2,390,868,971 | 2,839 | 21.89M (37) | 61.10K (10,854) | EN | 34839 | 2012-08-28 | SAMN00632093 | PRJNA68239 | Broad Institute | mammals |
| view | lesser Egyptian jerboa | Jaculus jaculus (5) | GCA_000280705.1_JacJac1.0 | 2,835,233,679 | 10,897 | 22.08M (36) | 15.68K (44,337) | 51337 | 2012-07-30 | SAMN00728442 | PRJNA72445 | Broad Institute | mammals | |
| lesser Egyptian jerboa | Jaculus jaculus (5) | GCA_020740685.1_mJacJac1.mat.Y.cur | 2,863,848,715 | 159 | 158.24M (7) | 22.10M (39) | 51337 | 2021-11-04 | SAMN20391724 | PRJNA773797 | Vertebrate Genomes Project | mammals | ||
| lesser Egyptian jerboa | Jaculus jaculus (5) | GCA_020740715.1_mJacJac1.pat.decon | 2,595,216,862 | 508 | 117.19M (8) | 6.61M (74) | 51337 | 2021-11-03 | SAMN20391724 | PRJNA773798 | Vertebrate Genomes Project | mammals | ||
| view | lesser Egyptian jerboa | Jaculus jaculus (5) | GCF_020740685.1_mJacJac1.mat.Y.cur | 2,863,865,261 | 160 | 158.24M (7) | 22.10M (39) | 51337 | 2021-11-04 | SAMN20391724 | PRJNA773797 | Vertebrate Genomes Project | mammals | |
| view | southern white rhinoceros | Ceratotherium simum simum (3) | GCA_000283155.1_CerSimSim1.0 | 2,464,350,348 | 3,086 | 26.28M (30) | 92.96K (7,379) | 73337 | 2012-07-31 | SAMN00778988 | PRJNA74583 | Broad Institute | mammals | |
| view | southern white rhinoceros | Ceratotherium simum simum (3) | GCF_000283155.1_CerSimSim1.0/cerSim1 | 2,464,367,180 | 3,087 | 26.28M (30) | 92.96K (7,379) | 73337 | 2012-07-31 | SAMN00778988 | PRJNA74583 | Broad Institute | mammals | |
| Cape golden mole | Chrysochloris asiatica (3) | GCA_000296735.1_ChrAsi1.0 | 4,210,093,806 | 20,499 | 13.47M (85) | 19.63K (47,029) | 185453 | 2012-09-19 | SAMN00744889 | PRJNA74591 | Broad Institute | mammals | ||
| view | Cape golden mole | Chrysochloris asiatica (3) | GCA_004027935.1_ChrAsi_v1_BIUU | 4,750,461,421 | 3,428,078 | 6.49K (166,215) | 6.44K (170,962) | 185453 | 2019-01-16 | SAMN07678135 | PRJNA399474 | Broad Institute | mammals | |
| view | Cape golden mole | Chrysochloris asiatica (3) | GCF_000296735.1_ChrAsi1.0 | 4,210,110,458 | 20,500 | 13.47M (85) | 19.63K (47,030) | 185453 | 2012-09-19 | SAMN00744889 | PRJNA74591 | Broad Institute | mammals | |
| aardvark | Orycteropus afer afer (2) | GCA_000298275.1_OryAfe1.0 | 4,444,063,711 | 22,508 | 7.88M (158) | 17.68K (54,127) | 1230840 | 2012-09-20 | SAMN00744890 | PRJNA74587 | Broad Institute | mammals | ||
| view | aardvark | Orycteropus afer afer (2) | GCF_000298275.1_OryAfe1.0 | 4,444,080,527 | 22,509 | 7.88M (158) | 17.68K (54,127) | 1230840 | 2012-09-20 | SAMN00744890 | PRJNA74587 | Broad Institute | mammals | |
| wild yak | Bos mutus (4) | GCA_000298355.1_BosGru_v2.0 | 2,645,145,588 | 41,191 | 1.41M (568) | 22.82K (33,279) | VU | 72004 | 2013-01-09 | SAMN00744358 | PRJNA74739 | BGI-shenzhen | mammals | |
| wild yak | Bos mutus (4) | GCA_007646595.3_ASM764659v3 | 2,761,379,179 | 158,691 | 16.59M (48) | 90.62K (8,414) | VU | 72004 | 2019-10-21 | SAMN11357514 | PRJNA531398 | Lanzhou University | mammals | |
| view | wild yak | Bos mutus (4) | GCF_000298355.1_BosGru_v2.0 | 2,645,161,911 | 41,192 | 1.41M (568) | 22.82K (33,280) | VU | 72004 | 2013-01-09 | SAMN00744358 | PRJNA74739 | BGI-shenzhen | mammals |
| wild yak | Bos mutus (4) | GCA_007646595.1_ASM764659v1 | 2,761,379,179 | 158,691 | 16.59M (48) | 90.62K (8,414) | VU | 72004 | 2019-07-30 | Lanzhou University | mammals | |||
| Cape elephant shrew | Elephantulus edwardii (3) | GCA_000299155.1_EleEdw1.0 | 3,843,982,861 | 8,768 | 15.01M (83) | 24.22K (38,558) | 28737 | 2012-10-10 | SAMN00749966 | PRJNA74589 | Broad Institute | mammals | ||
| Cape elephant shrew | Elephantulus edwardii (3) | GCA_004027355.1_EleEdw_v1_BIUU | 4,288,896,762 | 2,475,866 | 17.71K (63,461) | 16.49K (69,198) | 28737 | 2019-01-16 | SAMN07678142 | PRJNA399475 | Broad Institute | mammals | ||
| view | Cape elephant shrew | Elephantulus edwardii (3) | GCF_000299155.1_EleEdw1.0 | 3,843,982,861 | 8,768 | 15.01M (83) | 24.22K (38,558) | 28737 | 2012-10-10 | SAMN00749966 | PRJNA74589 | Broad Institute | mammals | |
| big brown bat | Eptesicus fuscus (2) | GCA_000308155.1_EptFus1.0 | 2,026,629,342 | 6,789 | 13.45M (39) | 21.39K (24,179) | 29078 | 2012-11-08 | SAMN00767986 | PRJNA72449 | Broad Institute | mammals | ||
| view | big brown bat | Eptesicus fuscus (2) | GCF_000308155.1_EptFus1.0 | 2,026,629,342 | 6,789 | 13.45M (39) | 21.39K (24,179) | 29078 | 2012-11-08 | SAMN00767986 | PRJNA72449 | Broad Institute | mammals | |
| view | Wild Bactrian camel | Camelus ferus (5) | GCA_000311805.2_CB1 | 2,009,177,929 | 13,333 | 2.01M (274) | 90.26K (5,814) | CR | 419612 | 2013-07-30 | SAMN01910617 | PRJNA76177 | The Bactrian Camels Genome Sequencing and Analysis Consortium | mammals |
| Wild Bactrian camel | Camelus ferus (5) | GCA_009834535.1_BCGSAC_Cfer_1.0 | 2,087,077,296 | 2,042 | 76.03M (11) | 5.37M (112) | CR | 419612 | 2020-01-08 | SAMN12102236 | PRJNA550024 | The Bactrian Camels Genome Sequencing and Analysis Consortium | mammals | |
| view | Wild Bactrian camel | Camelus ferus (5) | GCF_009834535.1_BCGSAC_Cfer_1.0 | 2,087,093,976 | 2,043 | 76.03M (11) | 5.37M (112) | CR | 419612 | 2020-01-08 | SAMN12102236 | PRJNA550024 | The Bactrian Camels Genome Sequencing and Analysis Consortium | mammals |
| small Madagascar hedgehog | Echinops telfairi (4) | GCA_000313985.2_ASM31398v2 | 2,947,103,070 | 7,489 | 54.42M (17) | 20.43K (35,403) | 9371 | 2019-07-15 | SAMN00216137 | PRJNA12590 | Broad Institute | mammals | ||
| view | small Madagascar hedgehog | Echinops telfairi (4) | GCF_000313985.2_ASM31398v2 | 2,947,119,619 | 7,490 | 54.42M (17) | 20.43K (35,403) | 9371 | 2019-07-15 | SAMN00216137 | PRJNA12590 | Broad Institute | mammals | |
| view | small Madagascar hedgehog | Echinops telfairi (4) | GCA_000313985.1_EchTel2.0 | 2,947,007,737 | 8,401 | 45.76M (21) | 20.43K (35,396) | 9371 | 2012-11-28 | Broad Institute | mammals | |||
| view | small Madagascar hedgehog | Echinops telfairi (4) | GCF_000313985.1_EchTel2.0/echTel2 | 2,947,024,286 | 8,402 | 45.76M (21) | 9371 | 2012-11-28 | Broad Institute | mammals | ||||
| prairie vole | Microtus ochrogaster (3) | GCA_000317375.1_MicOch1.0 | 2,287,340,943 | 6,335 | 17.27M (42) | 21.25K (29,205) | 79684 | 2012-12-07 | SAMN00727831 | PRJNA72443 | Broad Institute | mammals | ||
| prairie vole | Microtus ochrogaster (3) | GCA_020004485.1_ASM2000448v1 | 2,425,468,244 | 28,300 | 4.29M (150) | 44.73K (14,619) | 79684 | 2021-09-15 | SAMN11605340 | PRJNA541330 | Novartis AG | mammals | ||
| view | prairie vole | Microtus ochrogaster (3) | GCF_000317375.1_MicOch1.0 | 2,287,340,943 | 6,335 | 61.81M (14) | 61.81M (14) | 79684 | 2012-12-07 | SAMN00727831 | PRJNA72443 | Broad Institute | mammals | |
| goat | Capra hircus (9) | GCA_000317765.2_CHIR_2.0 | 2,809,418,462 | 102,895 | 9.09M (89) | 73.53K (10,961) | 9925 | 2015-09-16 | SAMN02953816 | PRJNA158393 | Beijing Genomics Institute | mammals | ||
| view | goat | Capra hircus (9) | GCA_001704415.1_ARS1 | 2,922,796,603 | 29,906 | 87.28M (13) | 26.24M (32) | 9925 | 2016-08-24 | SAMN03863711 | PRJNA290100 | USDA ARS | mammals | |
| goat | Capra hircus (9) | GCA_004361675.1_CVASU_BBG_1.0 | 3,041,623,660 | 3,972 | 102.34M (13) | 819 (825,019) | 9925 | 2019-03-22 | SAMN10460883 | PRJNA492932 | Bangladesh Goat Genome Consortium (BGGC) | mammals | ||
| goat | Capra hircus (9) | GCA_009823495.1_ASM982349v1 | 2,941,702,774 | 48,370 | 87.28M (13) | 87.28M (13) | 9925 | 2019-12-31 | SAMN09789169 | PRJNA485388 | Sher-e-Kashmir University of Agricultural Sciences and Technology | mammals | ||
| view | goat | Capra hircus (9) | GCA_015443085.1_Saanen_v1 | 2,696,218,280 | 1,362 | 102.38M (11) | 46.21M (20) | 9925 | 2020-11-16 | SAMN14408556 | PRJNA613503 | Northwest A&F University | mammals | |
| view | goat | Capra hircus (9) | GCF_001704415.1_ARS1 | 2,922,813,246 | 29,907 | 87.28M (13) | 26.24M (32) | 9925 | 2016-08-24 | SAMN03863711 | PRJNA290100 | USDA ARS | mammals | |
| Pacific walrus | Odobenus rosmarus divergens (2) | GCA_000321225.1_Oros_1.0 | 2,400,133,628 | 3,892 | 2.62M (269) | 89.95K (7,314) | VU | 9708 | 2013-01-16 | SAMN01180787 | PRJNA167474 | Marine mammals | mammals | |
| view | Pacific walrus | Odobenus rosmarus divergens (2) | GCF_000321225.1_Oros_1.0 | 2,400,150,193 | 3,893 | 2.62M (269) | 89.95K (7,314) | VU | 9708 | 2013-01-16 | SAMN01180787 | PRJNA167474 | Marine mammals | mammals |
| black flying fox | Pteropus alecto (2) | GCA_000325575.1_ASM32557v1 | 1,985,958,707 | 65,597 | 15.95M (36) | 31.84K (18,317) | 9402 | 2013-12-04 | SAMN01103203 | PRJNA171993 | BGI | mammals | ||
| view | black flying fox | Pteropus alecto (2) | GCF_000325575.1_ASM32557v1 | 1,985,975,446 | 65,598 | 15.95M (36) | 31.84K (18,318) | 9402 | 2013-12-04 | SAMN01103203 | PRJNA171993 | BGI | mammals | |
| bats | Myotis davidii (2) | GCA_000327345.1_ASM32734v1 | 2,059,799,708 | 101,769 | 3.45M (163) | 15.18K (36,105) | 225400 | 2012-12-20 | SAMN01103204 | PRJNA171994 | BGI | mammals | ||
| view | bats | Myotis davidii (2) | GCF_000327345.1_ASM32734v1 | 2,059,799,708 | 101,769 | 3.45M (163) | 15.18K (36,105) | 225400 | 2012-12-20 | SAMN01103204 | PRJNA171994 | BGI | mammals | |
| killer whale | Orcinus orca (6) | GCA_000331955.2_Oorc_1.1 | 2,372,919,875 | 1,668 | 12.74M (60) | 70.30K (9,480) | 9733 | 2013-01-31 | SAMN01180276 | PRJNA167475 | Marine mammals | mammals | ||
| view | killer whale | Orcinus orca (6) | GCF_000331955.2_Oorc_1.1 | 2,372,919,875 | 1,668 | 12.74M (60) | 70.30K (9,480) | 9733 | 2013-01-31 | SAMN01180276 | PRJNA167475 | Marine mammals | mammals | |
| Chinese tree shrew | Tupaia chinensis (2) | GCA_000334495.1_TupChi_1.0 | 2,846,580,235 | 50,750 | 3.67M (232) | 25.94K (30,449) | 246437 | 2013-01-31 | SAMN01084043 | PRJNA169406 | BGI | mammals | ||
| view | Chinese tree shrew | Tupaia chinensis (2) | GCF_000334495.1_TupChi_1.0 | 2,846,580,235 | 50,750 | 3.67M (232) | 25.94K (30,449) | 246437 | 2013-01-31 | SAMN01084043 | PRJNA169406 | BGI | mammals | |
| view | golden hamster | Mesocricetus auratus (5) | GCA_000349665.1_MesAur1.0 | 2,504,908,775 | 21,483 | 12.75M (57) | 22.51K (25,781) | VU | 10036 | 2013-03-29 | SAMN00769068 | PRJNA77669 | Broad Institute | mammals |
| golden hamster | Mesocricetus auratus (5) | GCA_017639785.1_BCM_Maur_2.0 | 2,457,062,007 | 6,346 | 85.18M (11) | 9.47M (75) | VU | 10036 | 2021-03-30 | SAMN18096087 | PRJNA705675 | Baylor College of Medicine Human Genome Sequencing Center | mammals | |
| view | golden hamster | Mesocricetus auratus (5) | GCF_017639785.1_BCM_Maur_2.0 | 2,457,078,271 | 6,347 | 85.18M (11) | 9.47M (75) | VU | 10036 | 2021-03-30 | SAMN18096087 | PRJNA705675 | Baylor College of Medicine Human Genome Sequencing Center | mammals |
| view | Weddell seal | Leptonychotes weddellii (2) | GCA_000349705.1_LepWed1.0 | 3,156,886,159 | 16,710 | 904.07K (920) | 23.66K (27,102) | 9713 | 2013-03-29 | SAMN00672463 | PRJNA68235 | Broad Institute | mammals | |
| view | Weddell seal | Leptonychotes weddellii (2) | GCF_000349705.1_LepWed1.0 | 3,156,902,762 | 16,711 | 904.03K (921) | 23.66K (27,102) | 9713 | 2013-03-29 | SAMN00672463 | PRJNA68235 | Broad Institute | mammals | |
| view | chiru | Pantholops hodgsonii (2) | GCA_000400835.1_PHO1.0 | 2,696,869,832 | 15,058 | 2.77M (295) | 18.67K (39,425) | 59538 | 2013-05-28 | SAMN00990743 | PRJNA72465 | BGI | mammals | |
| Brandt's bat | Myotis brandtii (2) | GCA_000412655.1_ASM41265v1 | 2,107,242,811 | 169,750 | 3.23M (181) | 23.29K (24,038) | 109478 | 2013-06-28 | SAMN01801565 | PRJNA178678 | BGI | mammals | ||
| view | Brandt's bat | Myotis brandtii (2) | GCF_000412655.1_ASM41265v1 | 2,107,242,811 | 169,750 | 3.23M (181) | 23.29K (24,038) | 109478 | 2013-06-28 | SAMN01801565 | PRJNA178678 | BGI | mammals | |
| view | Yangtze River dolphin | Lipotes vexillifer (2) | GCA_000442215.1_Lipotes_vexillifer_v1 | 2,429,195,737 | 30,712 | 2.42M (299) | 31.90K (22,718) | CR | 118797 | 2013-07-31 | SAMN02953859 | PRJNA174066 | BGI | mammals |
| view | Yangtze River dolphin | Lipotes vexillifer (2) | GCF_000442215.1_Lipotes_vexillifer_v1 | 2,429,212,129 | 30,713 | 2.42M (299) | 31.90K (22,718) | CR | 118797 | 2013-07-31 | SAMN02953859 | PRJNA174066 | BGI | mammals |
| view | Amur tiger | Panthera tigris altaica (2) | GCA_000464555.1_PanTig1.0 | 2,391,065,193 | 1,478 | 8.86M (87) | 30.03K (22,834) | EN | 74533 | 2013-09-06 | SAMN02086964 | PRJNA182708 | Personal Genomics Institute | mammals |
| view | straw-colored fruit bat | Eidolon helvum | GCA_000465285.1_ASM46528v1 | 1,837,754,460 | 133,538 | 27.68K (18,953) | 12.67K (42,661) | 77214 | 2013-09-13 | SAMN02212690 | PRJNA209406 | School of Biological & Chemical Sciences, Queen Mary University of London | mammals | |
| Indian false vampire | Megaderma lyra (2) | GCA_000465345.1_ASM46534v1 | 1,735,931,796 | 192,872 | 16.88K (28,868) | 7.04K (68,827) | 9413 | 2013-09-14 | SAMN02212695 | PRJNA209407 | School of Biological & Chemical Sciences, Queen Mary University of London | mammals | ||
| view | Indian false vampire | Megaderma lyra (2) | GCA_004026885.1_MegLyr_v1_BIUU | 2,620,948,449 | 1,902,801 | 96.49K (6,165) | 71.67K (8,413) | 9413 | 2019-01-16 | SAMN07678029 | PRJNA399353 | Broad Institute | mammals | |
| view | Parnell's mustached bat | Pteronotus parnellii | GCA_000465405.1_ASM46540v1 | 1,960,317,893 | 177,401 | 22.68K (24,036) | 9.50K (58,479) | 59476 | 2013-09-13 | SAMN02212709 | PRJNA209408 | School of Biological & Chemical Sciences, Queen Mary University of London | mammals | |
| greater horseshoe bat | Rhinolophus ferrumequinum (8) | GCA_000465495.1_ASM46549v1 | 1,926,439,238 | 160,500 | 21.15K (26,674) | 11.66K (49,794) | 59479 | 2013-09-15 | SAMN02213056 | PRJNA209409 | School of Biological & Chemical Sciences, Queen Mary University of London | mammals | ||
| greater horseshoe bat | Rhinolophus ferrumequinum (8) | GCA_004115265.3_mRhiFer1_v1.p | 2,075,785,400 | 135 | 88.03M (11) | 31.90M (22) | 59479 | 2019-05-17 | SAMN09948510 | PRJNA489106 | Vertebrate Genomes Project | mammals | ||
| view | greater horseshoe bat | Rhinolophus ferrumequinum (8) | GCA_004115295.1_mRhiFer1_v1.h | 1,514,615,512 | 13,424 | 301.18K (1,399) | 301.18K (1,399) | 59479 | 2019-01-28 | SAMN09948510 | PRJNA489105 | Vertebrate Genomes Project | mammals | |
| greater horseshoe bat | Rhinolophus ferrumequinum (8) | GCA_007922735.1_RhiFer_v1_BIUU | 2,183,991,669 | 345,321 | 156.96K (3,803) | 127.19K (4,794) | 59479 | 2019-08-08 | SAMN07678122 | PRJNA399429 | Broad Institute | mammals | ||
| greater horseshoe bat | Rhinolophus ferrumequinum (8) | GCA_014108255.1_mRhiFer1.p | 2,072,561,339 | 50 | 92.00M (10) | 21.75M (28) | 59479 | 2020-08-13 | SAMN14734547 | PRJNA628581 | Bat1K | mammals | ||
| view | greater horseshoe bat | Rhinolophus ferrumequinum (8) | GCF_004115265.1_mRhiFer1_v1.p | 2,075,768,562 | 134 | 88.03M (11) | 31.90M (22) | 59479 | 2019-05-16 | SAMN09948510 | PRJNA489106 | Vertebrate Genomes Project | mammals | |
| view | greater horseshoe bat | Rhinolophus ferrumequinum (8) | GCA_004115265.2_mRhiFer1_v1.p | 2,075,785,400 | 135 | 88.03M (11) | 31.90M (22) | 59479 | 2019-05-16 | Vertebrate Genomes Project | mammals | |||
| sperm whale | Physeter catodon (7) | GCA_000472045.1_Physeter_macrocephalus-2.0.2 | 2,280,711,356 | 11,710 | 427.29K (1,543) | 35.26K (19,334) | 9755 | 2013-09-30 | SAMN02953869 | PRJNA89089 | Aquatic Genome Models | mammals | ||
| sperm whale | Physeter catodon (7) | GCA_002837175.2_ASM283717v2 | 2,512,132,974 | 14,676 | 122.18M (9) | 42.54K (17,152) | 9755 | 2019-03-08 | SAMN07836523 | PRJNA411766 | BGI | mammals | ||
| sperm whale | Physeter catodon (7) | GCA_900411695.1_PhyCat2.0 | 2,512,140,680 | 14,676 | 122.18M (9) | 43.83K (16,658) | 9755 | 2018-07-01 | SAMEA1067854 | PRJEB24146 | CNGB | mammals | ||
| view | sperm whale | Physeter catodon (7) | GCF_002837175.2_ASM283717v2 | 2,512,149,402 | 14,677 | 122.18M (9) | 122.18M (9) | 9755 | 2019-03-08 | SAMN07836523 | PRJNA411766 | BGI | mammals | |
| sperm whale | Physeter catodon (7) | GCA_002837175.1_ASM283717v1 | 2,517,744,219 | 59,237 | 37.18M (22) | 119.92K (6,176) | 9755 | 2017-12-12 | BGI | mammals | ||||
| view | minke whale | Balaenoptera acutorostrata scammoni (2) | GCA_000493695.1_BalAcu1.0 | 2,431,671,281 | 10,775 | 12.84M (57) | 22.69K (30,761) | 310752 | 2013-10-31 | SAMN02192642 | PRJNA72723 | Korea Ocean Research & Development Institute | mammals | |
| view | minke whale | Balaenoptera acutorostrata scammoni (2) | GCF_000493695.1_BalAcu1.0/balAcu1 | 2,431,687,698 | 10,776 | 12.84M (57) | 22.69K (30,762) | 310752 | 2013-10-31 | SAMN02192642 | PRJNA72723 | Korea Ocean Research & Development Institute | mammals | |
| prairie deer mouse | Peromyscus maniculatus bairdii (5) | GCA_000500345.1_Pman_1.0 | 2,630,541,020 | 30,921 | 3.76M (193) | 36.37K (18,341) | 230844 | 2013-12-03 | SAMN00848614 | PRJNA53563 | Baylor College of Medicine | mammals | ||
| prairie deer mouse | Peromyscus maniculatus bairdii (5) | GCA_003704035.3_HU_Pman_2.1.3 | 2,512,423,440 | 8,523 | 115.03M (9) | 30.11K (23,322) | 230844 | 2020-09-17 | SAMN10150431 | PRJNA494228 | Harvard University / Howard Hughes Medical Institute | mammals | ||
| view | prairie deer mouse | Peromyscus maniculatus bairdii (5) | GCF_003704035.1_HU_Pman_2.1.3 | 2,512,439,762 | 8,524 | 115.03M (9) | 30.11K (23,322) | 230844 | 2020-09-17 | SAMN10150431 | PRJNA494228 | Harvard University / Howard Hughes Medical Institute | mammals | |
| prairie deer mouse | Peromyscus maniculatus bairdii (5) | GCA_003704035.1_HU_Pman_2.1 | 2,512,423,440 | 8,523 | 115.03M (9) | 30.11K (23,322) | 230844 | 2018-11-01 | Harvard University / Howard Hughes Medical Institute | mammals | ||||
| Bactrian camel | Camelus bactrianus (4) | GCA_000604445.1_CB1 | 1,568,773,545 | 781,462 | 2.81K (162,886) | 1.72K (257,941) | 9837 | 2013-07-03 | SAMEA3138966 | PRJEB407 | VETMEDUNI_POPGEN | mammals | ||
| view | Bactrian camel | Camelus bactrianus (4) | GCA_000767855.1_Ca_bactrianus_MBC_1.0 | 1,992,646,609 | 35,454 | 8.81M (68) | 139.07K (3,962) | 9837 | 2014-10-23 | SAMN02953968 | PRJNA183605 | Inner Mongolia Agricultural University, P.R.China | mammals | |
| view | Bactrian camel | Camelus bactrianus (4) | GCF_000767855.1_Ca_bactrianus_MBC_1.0 | 1,992,663,268 | 35,455 | 8.81M (68) | 139.02K (3,963) | 9837 | 2014-10-23 | SAMN02953968 | PRJNA183605 | Inner Mongolia Agricultural University, P.R.China | mammals | |
| view | Upper Galilee mountains blind mole rat | Nannospalax galili (2) | GCA_000622305.1_S.galili_v1.0 | 3,061,408,210 | 154,975 | 3.62M (238) | 30.35K (28,338) | 1026970 | 2014-06-05 | SAMN02299330 | PRJNA213569 | BGI | mammals | |
| view | Upper Galilee mountains blind mole rat | Nannospalax galili (2) | GCF_000622305.1_S.galili_v1.0 | 3,061,424,619 | 154,976 | 3.62M (238) | 30.35K (28,338) | 1026970 | 2014-06-05 | SAMN02299330 | PRJNA213569 | BGI | mammals | |
| view | polar bear | Ursus maritimus (4) | GCA_000687225.1_UrsMar_1.0 | 2,301,362,327 | 23,818 | 15.94M (46) | 46.51K (14,122) | VU | 29073 | 2014-05-09 | SAMN02729226 | PRJNA210951 | BGI-Shenzhen | mammals |
| polar bear | Ursus maritimus (4) | GCA_017311325.1_ASM1731132v1 | 2,330,485,043 | 3,900 | 72.24M (13) | 206.65K (3,292) | VU | 29073 | 2021-03-09 | SAMN10734297 | PRJNA669153 | University of California, Santa Cruz | mammals | |
| view | polar bear | Ursus maritimus (4) | GCF_017311325.1_ASM1731132v1 | 2,330,485,441 | 3,900 | 72.24M (13) | 206.65K (3,292) | VU | 29073 | 2021-03-09 | SAMN10734297 | PRJNA669153 | University of California, Santa Cruz | mammals |
| view | Brazilian guinea pig | Cavia aperea | GCA_000688575.1_CavAp1.0 | 2,716,396,567 | 3,131 | 27.93M (28) | 1.04K (451,846) | 37548 | 2014-01-21 | SAMN02252454 | PRJNA212237 | Leibniz Institute for Zoo and Wildlife research | mammals | |
| Sunda flying lemur | Galeopterus variegatus (4) | GCA_000696425.1_G_variegatus-3.0.2 | 3,187,643,824 | 179,513 | 245.19K (3,423) | 20.75K (33,045) | 482537 | 2014-06-05 | SAMN01758971 | PRJNA20511 | Washington University (WashU) | mammals | ||
| Sunda flying lemur | Galeopterus variegatus (4) | GCA_004027255.2_GalVar_v2_BIUU_UCD | 3,349,451,543 | 1,523,781 | 7.89M (91) | 34.67K (22,045) | 482537 | 2019-07-15 | SAMN07678019 | PRJNA399345 | Broad Institute | mammals | ||
| view | Sunda flying lemur | Galeopterus variegatus (4) | GCF_000696425.1_G_variegatus-3.0.2/galVar1 | 3,187,660,572 | 179,514 | 245.19K (3,423) | 20.75K (33,046) | 482537 | 2014-06-05 | SAMN01758971 | PRJNA20511 | Washington University (WashU) | mammals | |
| view | Sunda flying lemur | Galeopterus variegatus (4) | GCA_004027255.1_GalVar_v1_BIUU | 3,225,624,221 | 1,649,747 | 37.58K (19,536) | 482537 | 2019-1-16 | Broad Institute | mammals | ||||
| view | Przewalski's horse | Equus przewalskii (2) | GCA_000696695.1_Burgud | 2,395,937,679 | 53,096 | 513.80K (1,223) | 57.61K (10,599) | 9798 | 2014-06-05 | SAMN02808398 | PRJNA200657 | College of Animal Science, Inner Mongolian Agricultural University, China | mammals | |
| view | Przewalski's horse | Equus przewalskii (2) | GCF_000696695.1_Burgud | 2,395,954,271 | 53,097 | 513.80K (1,223) | 57.61K (10,599) | 9798 | 2014-06-05 | SAMN02808398 | PRJNA200657 | College of Animal Science, Inner Mongolian Agricultural University, China | mammals | |
| view | Chinese pangolin | Manis pentadactyla (3) | GCA_000738955.1_M_pentadactyla-1.1.1/manPen1 | 2,204,732,179 | 92,772 | 117.92K (5,268) | 28.72K (19,546) | CR | 143292 | 2014-08-11 | SAMN01943338 | PRJNA20331 | Washington University (WashU) | mammals |
| Chinese pangolin | Manis pentadactyla (3) | GCA_014570555.1_YNU_ManPten_2.0 | 2,399,643,910 | 4,693 | 7.84M (90) | 151.94K (4,136) | CR | 143292 | 2020-09-15 | SAMN11464812 | PRJNA529513 | Yunnan University | mammals | |
| view | Chinese pangolin | Manis pentadactyla (3) | GCF_014570555.1_YNU_ManPten_2.0 | 2,399,660,488 | 4,694 | 7.84M (90) | 151.94K (4,136) | CR | 143292 | 2020-09-15 | SAMN11464812 | PRJNA529513 | Yunnan University | mammals |
| Damara mole-rat | Fukomys damarensis (4) | GCA_000743615.1_DMR_v1.0 | 2,333,892,479 | 74,730 | 5.31M (127) | 44.83K (15,188) | 885580 | 2014-09-04 | SAMN02339281 | PRJNA190641 | BGI | mammals | ||
| Damara mole-rat | Fukomys damarensis (4) | GCA_012274545.1_DMR_v1.0_HiC | 2,334,358,650 | 73,969 | 62.59M (15) | 44.76K (15,205) | 885580 | 2020-04-13 | SAMN10973724 | PRJNA604608 | DNA Zoo Consortium | mammals | ||
| view | Damara mole-rat | Fukomys damarensis (4) | GCF_012274545.1_DMR_v1.0_HiC | 2,334,375,022 | 73,970 | 62.59M (15) | 44.76K (15,205) | 885580 | 2020-04-13 | SAMN10973724 | PRJNA604608 | DNA Zoo Consortium | mammals | |
| Western roe deer | Cervus capreolus | GCA_000751575.1_kmer631 | 2,785,377,831 | 3,088,511 | 10.46K (67,918) | 4.17K (169,372) | 9858 | 2014-09-09 | SAMEA2531521 | PRJEB4372 | UNIMELB | mammals | ||
| view | American bison | Bison bison bison (2) | GCA_000754665.1_Bison_UMD1.0/bisBis1 | 2,953,606,000 | 450,181 | 6.87M (125) | 18.84K (41,070) | 43346 | 2014-10-08 | SAMN02947321 | PRJNA257088 | University of Maryland | mammals | |
| view | American bison | Bison bison bison (2) | GCF_000754665.1_Bison_UMD1.0 | 2,828,031,685 | 128,431 | 7.19M (116) | 19.97K (37,834) | 43346 | 2014-10-08 | SAMN02947321 | PRJNA257088 | University of Maryland | mammals | |
| wild goat | Capra aegagrus (2) | GCA_000765075.1_Caeg1 | 2,583,320,943 | 6,616 | 1.75M (409) | 51.87K (13,133) | 9923 | 2014-07-15 | SAMEA3146278 | PRJEB3140 | EBI | mammals | ||
| view | wild goat | Capra aegagrus (2) | GCA_000978405.1_CapAeg_1.0 | 2,828,873,048 | 89,498 | 91.32M (13) | 19.35K (39,760) | 9923 | 2015-04-24 | SAMN03282421 | PRJNA261263 | BGI | mammals | |
| mouflon | Ovis aries musimon (2) | GCA_000765115.1_Oori1 | 2,589,834,840 | 6,173 | 2.22M (328) | 39.72K (17,191) | 9938 | 2014-07-15 | SAMEA3146279 | PRJEB3141 | EBI | mammals | ||
| view | alpaca | Vicugna pacos huacaya | GCA_000767525.1_Vi_pacos_V1.0 | 2,013,701,362 | 52,275 | 5.30M (107) | 213.65K (2,602) | 273913 | 2015-02-11 | SAMN02996813 | PRJNA233565 | BGI-Shenzhen | mammals | |
| view | Arabian camel | Camelus dromedarius (7) | GCA_000767585.1_PRJNA234474_Ca_dromedarius_V1.0 | 2,004,047,047 | 32,572 | 4.19M (132) | 69.13K (7,850) | 9838 | 2014-10-21 | SAMN03000646 | PRJNA234474 | King Abdulaziz City for Science and Technology | mammals | |
| Arabian camel | Camelus dromedarius (7) | GCA_000803125.3_CamDro3 | 2,169,346,739 | 21,069 | 70.37M (11) | 236.39K (2,637) | 9838 | 2019-10-07 | SAMN03252735 | PRJNA269274 | Vetmeduni Vienna | mammals | ||
| Arabian camel | Camelus dromedarius (7) | GCA_001640815.1_ASM164081v1 | 2,084,536,768 | 207,871 | 31.50K (19,666) | 9838 | 2016-05-09 | SAMN04455907 | PRJNA310822 | University of Bristol | mammals | |||
| view | Arabian camel | Camelus dromedarius (7) | GCF_000803125.2_CamDro3 | 2,169,363,382 | 21,070 | 70.37M (11) | 236.39K (2,637) | 9838 | 2019-10-07 | SAMN03252735 | PRJNA269274 | Vetmeduni Vienna | mammals | |
| Arabian camel | Camelus dromedarius (7) | GCA_000803125.1_Cdrom64K | 2,055,063,633 | 35,752 | 1.48M (393) | 9838 | 2014-12-17 | Vetmeduni Vienna | mammals | |||||
| view | Antarctic minke whale | Balaenoptera bonaerensis | GCA_000978805.1_ASM97880v1 | 2,234,641,557 | 421,444 | 20.08K (33,203) | 8.41K (78,739) | 33556 | 2015-03-18 | SAMD00016608 | PRJDB1465 | Division of Biological Science, Graduate School of Science, Kyoto University | mammals | |
| view | ass | Equus asinus (5) | GCA_001305755.1_ASM130575v1 | 2,391,034,547 | 2,166 | 3.78M (186) | 66.74K (9,906) | 9793 | 2015-10-02 | SAMN03010633 | PRJNA259598 | Inner Mongolian Agricultural University | mammals | |
| ass | Equus asinus (5) | GCA_016077325.2_ASM1607732v2 | 2,431,924,055 | 51 | 98.59M (10) | 25.07M (33) | 9793 | 2021-10-14 | SAMN08939908 | PRJNA431818 | Dairy Cattle Research Center, Shandong Academy of Agricultural Sciences | mammals | ||
| view | ass | Equus asinus (5) | GCF_016077325.2_ASM1607732v2 | 2,431,907,375 | 50 | 98.59M (10) | 25.07M (33) | 9793 | 2021-10-14 | SAMN08939908 | PRJNA431818 | Dairy Cattle Research Center, Shandong Academy of Agricultural Sciences | mammals | |
| ass | Equus asinus (5) | GCA_016077325.1_EquAsi1.0 | 2,432,132,968 | 51 | 98.60M (10) | 25.08M (33) | 9793 | 2020-12-15 | Dairy Cattle Research Center, Shandong Academy of Agricultural Sciences | mammals | ||||
| Bank vole | Myodes glareolus (5) | GCA_001305785.1_ASM130578v1 | 3,443,072,068 | 367,242 | 364.54K (2,415) | 1.59K (364,896) | 447135 | 2015-10-02 | SAMN03863713 | PRJNA290429 | University of Liverpool | mammals | ||
| Bank vole | Myodes glareolus (5) | GCA_004368595.1_ASM436859v1 | 2,396,225,068 | 50,926 | 1.59M (413) | 164.88K (3,570) | 447135 | 2019-03-26 | SAMN05860961 | PRJNA335935 | Lund University | mammals | ||
| Bank vole | Myodes glareolus (5) | GCA_902806735.1_Bank_vole1_10x | 2,323,042,649 | 635 | 20.65M (34) | 74.95K (9,161) | 447135 | 2020-02-22 | SAMEA5971946 | PRJEB34572 | LIV | mammals | ||
| Bank vole | Myodes glareolus (5) | GCA_902806745.1_Bank_vole2_10x | 2,280,515,051 | 923 | 10.96M (64) | 73.18K (9,255) | 447135 | 2020-02-22 | SAMEA5971950 | PRJEB34572 | LIV | mammals | ||
| view | bank vole | Myodes glareolus (5) | GCF_902806735.1_Bank_vole1_10x | 2,323,059,002 | 636 | 20.65M (34) | n/a | n/a | n/a | mammals | ||||
| European woodmouse | Apodemus sylvaticus | GCA_001305905.1_ASM130590v1 | 3,758,143,898 | 559,629 | 245.98K (3,805) | 1.21K (460,037) | 10129 | 2015-10-02 | SAMN03863808 | PRJNA290427 | University of Liverpool | mammals | ||
| short-tailed field vole | Microtus agrestis (5) | GCA_001305995.1_ASM130599v1 | 3,124,140,565 | 230,202 | 896.67K (985) | 1.38K (400,356) | 29092 | 2015-10-02 | SAMN03863806 | PRJNA290426 | University of Liverpool | mammals | ||
| short-tailed field vole | Microtus agrestis (5) | GCA_902806755.1_Field_vole2_10x | 2,029,319,752 | 1,366 | 13.35M (45) | 54.97K (10,908) | 29092 | 2020-04-16 | SAMEA6564476 | PRJEB36804 | LIV | mammals | ||
| short-tailed field vole | Microtus agrestis (5) | GCA_902806765.2_Field_vole1_10x | 2,252,702,487 | 51,345 | 692.79K (849) | 44.76K (14,393) | 29092 | 2020-04-16 | SAMEA6564475 | PRJEB36804 | University of Liverpool | mammals | ||
| short-tailed field vole | Microtus agrestis (5) | GCA_902806775.1_Field_vole_promethion_pilon | 2,258,814,014 | 6,993 | 2.94M (185) | 29092 | 2020-02-28 | SAMEA6564477 | PRJEB36805 | LIV | mammals | |||
| short-tailed field vole | Microtus agrestis (5) | GCA_902806765.1_Field_vole1_10x | 2,059,841,704 | 13,587 | 784.16K (717) | 48.20K (12,470) | 29092 | 2020-04-16 | LIV | mammals | ||||
| view | cheetah | Acinonyx jubatus (4) | GCA_001443585.1_aciJub1 | 2,372,536,860 | 14,382 | 3.12M (232) | 35.12K (19,057) | VU | 32536 | 2015-11-13 | SAMN04127588 | PRJNA297632 | Saint Petersburg State University | mammals |
| cheetah | Acinonyx jubatus (4) | GCA_003709585.1_Aci_jub_2 | 4,769,438,765 | 6,438 | 48.50M (29) | 180.01K (7,878) | VU | 32536 | 2018-10-22 | SAMN09699341 | PRJNA482183 | Felidae consortium | mammals | |
| view | cheetah | Acinonyx jubatus (4) | GCF_003709585.1_Aci_jub_2 | 2,384,851,327 | 3,220 | 48.50M (15) | 179.92K (3,937) | VU | 32536 | 2018-10-22 | SAMN09699341 | PRJNA482183 | Felidae consortium | mammals |
| Alpine marmot | Marmota marmota marmota (7) | GCA_001458135.2_marMar | 2,506,852,125 | 14,031 | 31.34M (25) | 66.55K (10,658) | 9994 | 2019-12-18 | SAMEA3214822 | PRJEB8272 | MRC NATIONAL INSTITUTE FOR MEDICAL RESEARCH | mammals | ||
| Alpine marmot | Marmota marmota marmota (7) | GCA_001458135.1_marMar2.1 | 2,510,587,379 | 14,543 | 31.34M (25) | 9994 | 2015-11-20 | MRC NATIONAL INSTITUTE FOR MEDICAL RESEARCH | mammals | |||||
| view | Alpine marmot | Marmota marmota marmota (7) | GCF_001458135.1_marMar2.1 | 2,510,587,379 | 14,543 | 31.34M (25) | 66.49K (10,673) | 9994 | 2015-11-20 | SAMEA3214822 | PRJEB8272 | MRC NATIONAL INSTITUTE FOR MEDICAL RESEARCH | mammals | |
| Egyptian rousette | Rousettus aegyptiacus (7) | GCA_001466805.2_Raegyp2.0 | 1,910,233,862 | 2,489 | 2.01M (297) | 1.49M (393) | 9407 | 2016-03-17 | SAMN04287759 | PRJNA303181 | Boston University School of Medicine | mammals | ||
| view | Egyptian rousette | Rousettus aegyptiacus (7) | GCA_004024865.1_RouAeg_v1_BIUU | 1,972,131,931 | 221,754 | 125.33K (4,059) | 100.26K (5,215) | 9407 | 2019-01-15 | SAMN07678121 | PRJNA399428 | Broad Institute | mammals | |
| Egyptian rousette | Rousettus aegyptiacus (7) | GCA_014176215.1_mRouAeg1.p | 1,893,618,717 | 30 | 113.81M (7) | 22.00M (25) | 9407 | 2020-08-07 | SAMN14734550 | PRJNA628585 | Bat1K | mammals | ||
| Egyptian rousette | Rousettus aegyptiacus (7) | GCA_015472805.1_rouAeg_1.0 | 1,898,981,941 | 4,947 | 37.19M (17) | 120.63K (4,253) | 9407 | 2020-10-30 | SAMD00256191 | PRJDB10312 | Comparative Genomics Laboratory, Center for Information Biology, National Institute of Genetics | mammals | ||
| view | Egyptian rousette | Rousettus aegyptiacus (7) | GCF_014176215.1_mRouAeg1.p | 1,893,602,072 | 29 | 113.81M (7) | 22.00M (25) | 9407 | 2020-08-07 | SAMN14734550 | PRJNA628585 | Bat1K | mammals | |
| bats | Miniopterus natalensis (2) | GCA_001595765.1_Mnat.v1 | 1,803,099,001 | 1,269 | 4.32M (118) | 29.78K (17,067) | 291302 | 2016-03-22 | SAMN03652541 | PRJNA283550 | University of California, San Francisco | mammals | ||
| view | bats | Miniopterus natalensis (2) | GCF_001595765.1_Mnat.v1 | 1,803,099,001 | 1,269 | 4.32M (118) | 29.78K (17,067) | 291302 | 2016-03-22 | SAMN03652541 | PRJNA283550 | University of California, San Francisco | mammals | |
| view | southeastern Asian house mouse | Mus musculus castaneus (2) | GCA_001624445.1_CAST_EiJ_v1 | 2,653,990,650 | 2,977 | 133.75M (9) | 11.64K (56,169) | 10091 | 2016-04-26 | SAMN04489822 | PRJNA310854 | Wellcome Trust Sanger Institute | mammals | |
| view | eastern European house mouse | Mus musculus musculus (2) | GCA_001624775.1_PWK_PhJ_v1 | 2,559,987,392 | 3,140 | 128.39M (9) | 5.11K (134,052) | 39442 | 2016-04-26 | SAMN04489829 | PRJNA310854 | Wellcome Trust Sanger Institute | mammals | |
| view | western European house mouse | Mus musculus domesticus (2) | GCA_001624835.1_WSB_EiJ_v1 | 2,689,657,557 | 2,239 | 133.18M (9) | 11.78K (55,447) | 10092 | 2016-04-26 | SAMN04489831 | PRJNA310854 | Wellcome Trust Sanger Institute | mammals | |
| view | western wild mouse | Mus spretus (3) | GCA_001624865.1_SPRET_EiJ_v1 | 2,625,587,472 | 5,404 | 131.95M (9) | 17.89K (37,989) | 10096 | 2016-04-26 | SAMN04489830 | PRJNA310854 | Wellcome Trust Sanger Institute | mammals | |
| view | even-toed ungulates | Giraffa tippelskirchi (2) | GCA_001651235.1_ASM165123v1 | 2,705,072,464 | 513,177 | 212.16K (3,486) | 47.89K (15,474) | 439328 | 2016-05-20 | SAMN04526126 | PRJNA313910 | Pennsylvania State University | mammals | |
| even-toed ungulates | Giraffa tippelskirchi (2) | GCA_013496395.1_ASM1349639v1 | 2,490,075,762 | 75,681 | 160.34M (7) | 25.03K (29,061) | 439328 | 2020-07-24 | SAMN09604854 | PRJNA479821 | University of California Davis | mammals | ||
| view | okapi | Okapia johnstoni (2) | GCA_001660835.1_ASM166083v1 | 2,878,133,036 | 837,179 | 111.54K (6,512) | 39.57K (18,816) | EN | 86973 | 2016-06-08 | SAMN04526128 | PRJNA313910 | Pennsylvania State University | mammals |
| okapi | Okapia johnstoni (2) | GCA_021018685.1_ASM2101868v1 | 2,621,100,252 | 42,423 | 3.62M (230) | 95.17K (7,876) | EN | 86973 | 2021-12-01 | SAMN08712243 | PRJNA438286 | Northwestern Polytechnical University | mammals | |
| desert woodrat | Neotoma lepida | GCA_001675575.1_ASM167557v1 | 2,353,855,022 | 119,373 | 151.69K (2,677) | 9.58K (62,182) | 56216 | 2016-06-23 | SAMN04893622 | PRJNA319537 | University of Utah | mammals | ||
| view | Transcaucasian mole vole | Ellobius lutescens (2) | GCA_001685075.1_ASM168507v1 | 2,353,188,398 | 58,423 | 242.12K (2,674) | 11.65K (57,713) | 39086 | 2016-07-14 | SAMN04317027 | PRJNA305123 | Erasmus medical center (ErasmusMC) | mammals | |
| Transcaucasian mole vole | Ellobius lutescens (2) | GCA_001685115.1_ASM168511v1 | 2,191,766,689 | 413,500 | 13.22K (48,045) | 6.46K (97,630) | 39086 | 2016-07-14 | SAMN04317028 | PRJNA305123 | Erasmus medical center (ErasmusMC) | mammals | ||
| view | Northern mole vole | Ellobius talpinus | GCA_001685095.1_ETalpinus_0.1 | 2,265,966,243 | 350,460 | 15.25K (43,138) | 8.26K (80,379) | 329620 | 2016-07-14 | SAMN04317029 | PRJNA305123 | Erasmus medical center (ErasmusMC) | mammals | |
| view | Malayan pangolin | Manis javanica (4) | GCA_001685135.1_ManJav1.0 | 2,547,379,330 | 80,669 | 204.73K (3,399) | 38.92K (16,963) | CR | 9974 | 2016-07-14 | SAMN02935387 | PRJNA256023 | The International Pangolin Research Consortium | mammals |
| Malayan pangolin | Manis javanica (4) | GCA_014570535.1_YNU_ManJav_2.0 | 2,438,961,198 | 17,968 | 13.85M (54) | 83.96K (7,689) | CR | 9974 | 2020-09-15 | SAMN11464811 | PRJNA529512 | Yunnan University | mammals | |
| view | Malayan pangolin | Manis javanica (4) | GCF_014570535.1_YNU_ManJav_2.0 | 2,438,977,774 | 17,969 | 13.85M (54) | 83.96K (7,689) | CR | 9974 | 2020-09-15 | SAMN11464811 | PRJNA529512 | Yunnan University | mammals |
| rodents | Phodopus sungorus (2) | GCA_001707965.1_Psun0.5 | 2,003,225,912 | 1,462,128 | 2.39K (238,638) | 10044 | 2016-08-18 | SAMN05191964 | PRJNA318271 | University of Chicago | mammals | |||
| view | leopard | Panthera pardus (2) | GCA_001857705.1_PanPar1.0 | 2,578,002,243 | 50,376 | 21.70M (39) | 20.99K (34,310) | VU | 9691 | 2016-11-16 | SAMN04347630 | PRJNA306701 | Ulsan National Institute of Science and Technology | mammals |
| view | leopard | Panthera pardus (2) | GCF_001857705.1_PanPar1.0 | 2,578,019,207 | 50,377 | 21.70M (39) | 20.99K (34,311) | VU | 9691 | 2016-11-16 | SAMN04347630 | PRJNA306701 | Ulsan National Institute of Science and Technology | mammals |
| African hunting dog | Lycaon pictus (3) | GCA_001883655.1_LycPicKen1.0 | 2,356,716,622 | 813 | 64.19M (14) | 2.69K (216,566) | EN | 9622 | 2016-12-01 | SAMN04312209 | PRJNA304992 | Smithsonian Institution | mammals | |
| view | African hunting dog | Lycaon pictus (3) | GCA_001887905.1_LycPicSAfr1.0 | 2,358,143,818 | 803 | 63.24M (15) | 5.55K (113,633) | EN | 9622 | 2016-12-01 | SAMN04312208 | PRJNA304992 | Smithsonian Institution | mammals |
| African hunting dog | Lycaon pictus (3) | GCA_004216515.1_sis1-161031-pseudohap | 2,137,698,293 | 1,127 | 7.49M (76) | 61.23K (10,359) | EN | 9622 | 2019-02-20 | SAMN09917439 | PRJNA488046 | Stanford University | mammals | |
| view | Chinese rufous horseshoe bat | Rhinolophus sinicus (4) | GCA_001888835.1_ASM188883v1 | 2,073,344,508 | 63,439 | 3.75M (161) | 37.80K (15,841) | 89399 | 2016-12-04 | SAMN04038064 | PRJNA294852 | SKLEC & IECR | mammals | |
| view | great roundleaf bat | Hipposideros armiger (2) | GCA_001890085.1_ASM189008v1 | 2,236,564,388 | 7,570 | 2.33M (272) | 39.86K (13,915) | 186990 | 2016-12-06 | SAMN03177460 | PRJNA267039 | SKLEC & IECR | mammals | |
| view | great roundleaf bat | Hipposideros armiger (2) | GCF_001890085.1_ASM189008v1 | 2,236,581,172 | 7,571 | 2.33M (272) | 39.86K (13,915) | 186990 | 2016-12-06 | SAMN03177460 | PRJNA267039 | SKLEC & IECR | mammals | |
| American beaver | Castor canadensis (5) | GCA_001984765.1_C.can_genome_v1.0 | 2,518,306,565 | 21,157 | 317.71K (2,073) | 273.95K (2,431) | 51338 | 2017-02-04 | SAMN06187566 | PRJNA359140 | Hospital for Sick Children | mammals | ||
| view | American beaver | Castor canadensis (5) | GCA_004027675.1_CasCan_v1_BIUU | 2,761,481,163 | 832,147 | 55.72K (13,511) | 49.37K (15,313) | 51338 | 2019-01-16 | SAMN07678136 | PRJNA399431 | Broad Institute | mammals | |
| American beaver | Castor canadensis (5) | GCA_009822645.1_ASM982264v1 | 3,133,828,374 | 243,841 | 26.15M (31) | 86.94K (9,866) | 51338 | 2019-12-31 | SAMN10409246 | PRJNA505050 | Institute of Zoology, Chinese Academy of Sciences | mammals | ||
| American beaver | Castor canadensis (5) | GCA_900168385.1_bgp_v1 | 4,167,116,470 | 629,174 | 295.26K (3,570) | 2.70K (252,787) | 51338 | 2017-05-01 | SAMEA101510668 | PRJEB19765 | OREGON STATE UNIVERSITY | mammals | ||
| view | American beaver | Castor canadensis (5) | GCF_001984765.1_C.can_genome_v1.0 | 2,518,306,565 | 21,157 | 317.71K (2,073) | 273.95K (2,431) | 51338 | 2017-02-04 | SAMN06187566 | PRJNA359140 | Hospital for Sick Children | mammals | |
| view | lesser panda | Ailurus fulgens styani | GCA_002007465.1_ASM200746v1 | 2,342,939,051 | 11,589 | 2.98M (215) | 99.58K (6,772) | EN | 424585 | 2017-02-28 | SAMN04169031 | PRJNA298932 | Institute of Zoology, Chinese Academy of Sciences | mammals |
| koala | Phascolarctos cinereus (3) | GCA_002099425.1_phaCin_unsw_v4.1 | 3,192,565,135 | 1,906 | 11.59M (85) | VU | 38626 | 2017-04-18 | SAMN06198159 | PRJNA359763 | The Earlham Institute | mammals | ||
| koala | Phascolarctos cinereus (3) | GCA_900166895.1_phaCin_tgac_v2.0 | 3,603,908,365 | 796,464 | 798.27K (1,246) | 126.88K (7,804) | VU | 38626 | 2018-05-04 | SAMEA91939168 | PRJEB19483 | KOALA GENOME CONSORTIUM | mammals | |
| view | koala | Phascolarctos cinereus (3) | GCF_002099425.1_phaCin_unsw_v4.1 | 3,192,581,492 | 1,907 | 11.59M (85) | VU | 38626 | 2017-04-18 | SAMN06198159 | PRJNA359763 | The Earlham Institute | mammals | |
| view | white-tailed deer | Odocoileus virginianus texanus (2) | GCA_002102435.1_Ovir.te_1.0 | 2,380,489,210 | 17,025 | 850.72K (758) | 122.02K (5,324) | 9880 | 2017-04-20 | SAMN05363940 | PRJNA317745 | Baylor College of Medicine | mammals | |
| view | white-tailed deer | Odocoileus virginianus texanus (2) | GCF_002102435.1_Ovir.te_1.0 | 2,380,505,687 | 17,026 | 850.72K (758) | 122.02K (5,324) | 9880 | 2017-04-20 | SAMN05363940 | PRJNA317745 | Baylor College of Medicine | mammals | |
| grey whale | Eschrichtius robustus (3) | GCA_002189225.1_ASM218922v1 | 2,849,453,582 | 57,203 | 187.46K (4,089) | 10.07K (63,792) | 9764 | 2017-06-09 | SAMN06837692 | PRJNA384396 | Purdue University | mammals | ||
| grey whale | Eschrichtius robustus (3) | GCA_002738545.1_EschrichtiusRobustus1.0 | 2,922,979,301 | 1,213,011 | 10.67K (80,700) | 2.66K (198,066) | 9764 | 2017-10-31 | SAMN07276959 | PRJNA391859 | Laboratory of postgenomic studies, Engelhardt Institute of Molecular Biology, Russian Academy of Sciences | mammals | ||
| view | grey whale | Eschrichtius robustus (3) | GCA_004363415.1_EscRob_v1_BIUU | 2,617,572,198 | 1,036,148 | 94.41K (7,799) | 68.56K (10,748) | 9764 | 2019-03-22 | SAMN07678123 | PRJNA399463 | Broad Institute | mammals | |
| red deer | Cervus elaphus hippelaphus | GCA_002197005.1_CerEla1.0 | 3,438,623,608 | 11,479 | 107.36M (13) | 7.94K (64,528) | 46360 | 2017-06-19 | SAMN05196248 | PRJNA324173 | National Agricultural Research and Innovation Centre | mammals | ||
| Hawaiian monk seal | Neomonachus schauinslandi (4) | GCA_002201575.2_ASM220157v2 | 2,419,460,046 | 8,095 | 150.81M (7) | 181.06K (3,875) | EN | 29088 | 2021-10-20 | SAMN06841387 | PRJNA384558 | Johns Hopkins University | mammals | |
| view | Hawaiian monk seal | Neomonachus schauinslandi (4) | GCF_002201575.2_ASM220157v2 | 2,419,443,398 | 8,094 | 150.81M (7) | 181.06K (3,875) | EN | 29088 | 2021-10-20 | SAMN06841387 | PRJNA384558 | Johns Hopkins University | mammals |
| view | Hawaiian monk seal | Neomonachus schauinslandi (4) | GCA_002201575.1_ASM220157v1 | 2,400,917,536 | 7,872 | 29.52M (27) | 112.70K (6,246) | EN | 29088 | 2017-06-20 | Johns Hopkins University | mammals | ||
| view | Hawaiian monk seal | Neomonachus schauinslandi (4) | GCF_002201575.1_ASM220157v1 | 2,400,934,290 | 7,873 | 29.52M (27) | 112.70K (6,246) | EN | 29088 | 2017-06-20 | Johns Hopkins University | mammals | ||
| view | aoudad | Ammotragus lervia | GCA_002201775.1_ALER1.0 | 2,650,836,958 | 77,320 | 1.30M (604) | 52.02K (13,468) | VU | 9899 | 2017-06-20 | SAMN06233879 | Northwest A&F University | mammals | |
| Mongolian gerbil | Meriones unguiculatus (4) | GCA_002204375.1_MunDraft-v1.0 | 2,523,107,715 | 68,792 | 374.69K (1,538) | 46.55K (11,954) | 10047 | 2017-06-21 | SAMN06897401 | PRJNA385619 | Lucigen Corp. | mammals | ||
| view | Mongolian gerbil | Meriones unguiculatus (4) | GCA_004026785.1_MerUng_v1_BIUU | 2,637,041,433 | 785,187 | 100.88K (5,504) | 69.84K (8,477) | 10047 | 2019-01-16 | SAMN07678137 | PRJNA399432 | Broad Institute | mammals | |
| view | Mongolian gerbil | Meriones unguiculatus (4) | GCA_008131255.1_ASM813125v1 | 2,537,531,842 | 309,090 | 500.04K (871) | 58.69K (12,341) | 10047 | 2019-08-30 | SAMN11651137 | PRJNA543000 | BGI | mammals | |
| view | Mongolian gerbil | Meriones unguiculatus (4) | GCF_002204375.1_MunDraft-v1.0 | 2,523,124,066 | 68,793 | 374.69K (1,538) | 46.55K (11,954) | 10047 | 2017-06-21 | SAMN06897401 | PRJNA385619 | Lucigen Corp. | mammals | |
| fat sand rat | Psammomys obesus (3) | GCA_002215935.2_ASM221593v2 | 2,365,774,835 | 35,640 | 10.47M (62) | 76.39K (8,754) | 48139 | 2020-02-10 | SAMN06061930 | PRJNA355058 | Department of Zoology, University of Oxford, UK | mammals | ||
| fat sand rat | Psammomys obesus (3) | GCA_907164565.1_mPsaObe1.curated_primary_1811 | 2,364,980,841 | 11,459 | 20.18M (34) | 77.21K (9,129) | 48139 | 2021-06-02 | SAMEA8556771 | PRJEB44074 | WELLCOME TRUST SANGER INSTITUTE | mammals | ||
| view | fat sand rat | Psammomys obesus (3) | GCA_002215935.1_ASM221593v1 | 2,311,471,749 | 96,427 | 76.40K (8,752) | 48139 | 2017-7-7 | Department of Zoology, University of Oxford, UK | mammals | ||||
| view | sea otter | Enhydra lutris kenyoni (3) | GCA_002288905.2_ASM228890v2 | 2,455,260,235 | 6,770 | 38.75M (20) | 244.55K (2,958) | EN | 391180 | 2017-09-11 | SAMN07211055 | PRJNA388419 | BC Cancer Agency | mammals |
| view | sea otter | Enhydra lutris kenyoni (3) | GCF_002288905.1_ASM228890v2 | 2,455,276,666 | 6,771 | 38.75M (20) | 244.53K (2,959) | EN | 391180 | 2017-09-11 | SAMN07211055 | PRJNA388419 | BC Cancer Agency | mammals |
| sea otter | Enhydra lutris kenyoni (3) | GCA_002288905.1_ASM228890v1 | 2,425,577,858 | 29,591 | 244.55K (2,958) | EN | 391180 | 2017-9-11 | BC Cancer Agency | mammals | ||||
| beluga whale | Delphinapterus leucas (7) | GCA_002288925.3_ASM228892v3 | 2,362,782,543 | 5,905 | 31.18M (21) | 196.69K (3,617) | 9749 | 2019-08-29 | SAMN06216270 | PRJNA360851 | BC Cancer Agency | mammals | ||
| beluga whale | Delphinapterus leucas (7) | GCA_009917725.1_GSC_bbay_1.0 | 2,422,275,766 | 51,177 | 1.36M (535) | 76.76K (8,960) | 9749 | 2020-01-07 | SAMN12242088 | PRJNA553680 | National Institute of Standards and Technology | mammals | ||
| beluga whale | Delphinapterus leucas (7) | GCA_009917745.1_GSC_cook_1.0 | 2,389,897,611 | 25,931 | 3.01M (231) | 141.06K (4,850) | 9749 | 2020-01-07 | SAMN12238539 | PRJNA553680 | National Institute of Standards and Technology | mammals | ||
| view | beluga whale | Delphinapterus leucas (7) | GCF_002288925.2_ASM228892v3 | 2,362,774,659 | 5,905 | 31.18M (21) | 196.69K (3,617) | 9749 | 2019-08-29 | SAMN06216270 | PRJNA360851 | BC Cancer Agency | mammals | |
| beluga whale | Delphinapterus leucas (7) | GCA_002288925.1_ASM228892v1 | 2,326,779,436 | 35,369 | 159.14K (4,468) | 9749 | 2017-9-11 | BC Cancer Agency | mammals | |||||
| view | beluga whale | Delphinapterus leucas (7) | GCA_002288925.2_ASM228892v2 | 2,358,506,062 | 6,971 | 19.89M (33) | 159.14K (4,468) | 9749 | 2017-09-11 | BC Cancer Agency | mammals | |||
| large Japanese field mouse | Apodemus speciosus | GCA_002335545.1_Aspe_assembly01 | 3,494,287,372 | 336,124 | 49.03K (16,498) | 4.00K (123,963) | 105296 | 2017-09-12 | SAMD00084465 | PRJDB5914 | University of the Ryukyus | mammals | ||
| view | Daurian ground squirrel | Spermophilus dauricus | GCA_002406435.1_ASM240643v1 | 3,106,271,744 | 360,804 | 1.76M (493) | 34.85K (24,748) | 99837 | 2017-09-28 | SAMN07711139 | PRJNA215874 | BGI-shenzhen | mammals | |
| view | Pere David's deer | Elaphurus davidianus (2) | GCA_002443075.1_Milu1.0 | 2,584,693,296 | 194,812 | 2.84M (252) | 59.95K (12,424) | 43332 | 2017-10-04 | SAMN03020601 | PRJNA256236 | Nanjing Normal University | mammals | |
| Pere David's deer | Elaphurus davidianus (2) | GCA_021018665.1_miluL | 2,524,808,978 | 46,350 | 3.04M (223) | 32.71K (22,564) | 43332 | 2021-12-01 | SAMN07270940 | PRJNA438286 | Northwestern Polytechnical University | mammals | ||
| plains viscacha rat | Tympanoctomys barrerae | GCA_002564285.1_Tym_barrerae_AO245_v1 | 2,651,634,209 | 1,558,800 | 4.70K (142,287) | 4.18K (163,478) | 61882 | 2017-10-17 | SAMN06642005 | PRJNA380259 | McMaster University | mammals | ||
| viscacha rat | Octomys mimax | GCA_002564305.1_Oct_mimax_AO248_v1 | 2,591,288,717 | 1,257,804 | 4.87K (142,998) | 4.48K (157,407) | 135583 | 2017-10-17 | SAMN06642006 | PRJNA380259 | McMaster University | mammals | ||
| view | Sumatran rhinoceros | Dicerorhinus sumatrensis sumatrensis | GCA_002844835.1_ASM284483v1 | 2,949,863,658 | 1,061,589 | 614.50K (1,268) | 89.45K (8,673) | CR | 310712 | 2017-12-19 | SAMN07833945 | PRJNA415733 | Marshall University Genomic Core Facility | mammals |
| Hispaniolan solenodon | Solenodon paradoxus woodi | GCA_002901085.1_ASM290108v1 | 2,049,415,269 | 40,482 | 110.92K (5,328) | 89.12K (6,669) | 1906353 | 2018-01-26 | SAMN07314178 | PRJNA368679 | University of Puerto Rico - Mayaguez Campus | mammals | ||
| common vampire bat | Desmodus rotundus (7) | GCA_002940915.1_ASM294091v1 | 2,079,315,015 | 31,125 | 26.87M (26) | 9430 | 2018-2-23 | University of Copenhagen | mammals | |||||
| view | common vampire bat | Desmodus rotundus (7) | GCA_002940915.2_ASM294091v2 | 2,063,791,738 | 29,800 | 26.87M (26) | 80.25K (6,951) | 9430 | 2018-02-23 | SAMN07783852 | PRJNA414273 | University of Copenhagen | mammals | |
| view | common vampire bat | Desmodus rotundus (7) | GCF_002940915.1_ASM294091v2 | 2,063,808,397 | 29,801 | 26.87M (26) | 80.25K (6,951) | 9430 | 2018-02-23 | SAMN07783852 | PRJNA414273 | University of Copenhagen | mammals | |
| view | hippopotamus | Hippopotamus amphibius (4) | GCA_002995585.1_ASM299558v1 | 2,425,746,322 | 128,772 | 110.75K (6,045) | 34.06K (19,086) | VU | 9833 | 2018-03-13 | SAMN07206988 | PRJNA389773 | Senckenberg Gesellschaft fuer Naturforschung | mammals |
| hippopotamus | Hippopotamus amphibius (4) | GCA_004027065.2_HipAmp_v2_BIUU_UCD | 2,733,493,772 | 910,835 | 4.44M (171) | 76.61K (9,640) | VU | 9833 | 2019-07-15 | SAMN07678089 | PRJNA399399 | Broad Institute | mammals | |
| view | hippopotamus | Hippopotamus amphibius (4) | GCA_004027065.1_HipAmp_v1_BIUU | 2,677,915,672 | 967,869 | 86.53K (8,449) | VU | 9833 | 2019-1-16 | Broad Institute | mammals | |||
| striped hyena | Hyaena hyaena (3) | GCA_003009895.1_ASM300989v1 | 2,374,716,107 | 5,760 | 2.00M (332) | 311.20K (2,234) | 95912 | 2018-03-19 | SAMN07212965 | PRJNA390068 | Potsdam University | mammals | ||
| view | striped hyena | Hyaena hyaena (3) | GCA_004023945.1_HyaHya_v1_BIUU | 2,445,474,026 | 350,223 | 66.49K (10,586) | 51.68K (13,695) | 95912 | 2019-01-15 | SAMN07678047 | PRJNA399363 | Broad Institute | mammals | |
| view | striped hyena | Hyaena hyaena (3) | GCF_003009895.1_ASM300989v1 | 2,374,733,219 | 5,761 | 2.00M (332) | 311.20K (2,234) | 95912 | 2018-03-19 | SAMN07212965 | PRJNA390068 | Potsdam University | mammals | |
| Yangtze finless porpoise | Neophocaena asiaeorientalis asiaeorientalis (5) | GCA_003031525.2_Neophocaena_asiaeorientalis_V1 | 2,284,609,912 | 13,695 | 6.34M (103) | 86.00K (7,730) | EN | 1706337 | 2018-04-03 | SAMN05831577 | PRJNA343136 | Nanjing normal university | mammals | |
| Yangtze finless porpoise | Neophocaena asiaeorientalis asiaeorientalis (5) | GCA_020395145.1_ASM2039514v1 | 2,323,587,710 | 23,924 | 1.70M (407) | 49.85K (13,971) | EN | 1706337 | 2021-10-08 | SAMN08512128 | PRJNA433603 | Northwestern Polytechnical University | mammals | |
| view | Yangtze finless porpoise | Neophocaena asiaeorientalis asiaeorientalis (5) | GCF_003031525.2_Neophocaena_asiaeorientalis_V1 | 2,284,626,297 | 13,696 | 6.34M (103) | 86.00K (7,730) | EN | 1706337 | 2018-04-03 | SAMN05831577 | PRJNA343136 | Nanjing normal university | mammals |
| view | Yangtze finless porpoise | Neophocaena asiaeorientalis asiaeorientalis (5) | GCA_003031525.1_Neophocaena_asiaeorientalis_V1 | 2,284,611,699 | 13,698 | 6.34M (103) | 86.00K (7,730) | EN | 1706337 | 2018-04-03 | Nanjing normal university | mammals | ||
| view | Yangtze finless porpoise | Neophocaena asiaeorientalis asiaeorientalis (5) | GCF_003031525.1_Neophocaena_asiaeorientalis_V1 | 2,284,628,084 | 13,699 | 6.34M (103) | 86.00K (7,730) | EN | 1706337 | 2018-04-03 | Nanjing normal university | mammals | ||
| ass | Equus asinus asinus | GCA_003033725.1_ASM303372v1 | 2,321,045,832 | 9,021 | 15.14M (43) | 134.07K (4,816) | 83772 | 2018-04-04 | SAMN02179859 | PRJNA205517 | Centre for GeoGenetics | mammals | ||
| harbor porpoise | Phocoena phocoena (3) | GCA_003071005.2_ASM307100v2 | 2,391,782,435 | 13,487 | 28.30M (28) | 2.84K (219,354) | 9742 | 2020-11-10 | SAMN08000480 | PRJNA417595 | University of Potsdam | mammals | ||
| view | harbor porpoise | Phocoena phocoena (3) | GCA_004363495.1_PhoPho_v1_BIUU | 2,701,010,810 | 1,331,158 | 115.97K (6,441) | 89.11K (8,515) | 9742 | 2019-03-22 | SAMN07678060 | PRJNA399454 | Broad Institute | mammals | |
| harbor porpoise | Phocoena phocoena (3) | GCA_003071005.1_ASM307100v1 | 2,441,140,962 | 142,029 | 27.50M (29) | 2.77K (226,913) | 9742 | 2018-04-24 | University of Potsdam | mammals | ||||
| argali | Ovis ammon (2) | GCA_003121645.1_O_ammon_KGZ_v1.0 | 2,643,433,589 | 41,955 | 72.29M (12) | 151.57K (5,037) | 30527 | 2018-05-11 | SAMN06233880 | Northwest A&F University | mammals | |||
| argali | Ovis ammon (2) | GCA_006410595.1_AGL | 2,659,657,073 | 240,203 | 5.62M (127) | 46.56K (14,698) | 30527 | 2019-06-24 | SAMN08714503 | PRJNA438286 | Northwestern Polytechnical University | mammals | ||
| red fox | Vulpes vulpes (2) | GCA_003160815.1_VulVul2.2 | 2,421,551,259 | 82,423 | 12.47M (55) | 55.45K (12,033) | 9627 | 2018-05-25 | SAMN06553695 | PRJNA378561 | University of Illinois at Urbana-Champaign | mammals | ||
| view | red fox | Vulpes vulpes (2) | GCF_003160815.1_VulVul2.2 | 2,421,568,072 | 82,424 | 12.47M (55) | 55.45K (12,033) | 9627 | 2018-05-25 | SAMN06553695 | PRJNA378561 | University of Illinois at Urbana-Champaign | mammals | |
| bharal | Pseudois nayaur | GCA_003182575.1_ASM318257v1 | 2,584,167,189 | 214,772 | 21.39K (34,328) | 20.98K (35,038) | 59542 | 2018-05-31 | SAMN06233878 | Northwest A&F University | mammals | |||
| Siberian ibex | Capra sibirica (2) | GCA_003182615.2_ASM318261v2 | 2,733,031,394 | 85,609 | 15.19M (54) | 376.58K (2,131) | 72544 | 2018-10-30 | SAMN06233877 | Northwest A&F University | mammals | |||
| Indo-pacific bottlenose dolphin | Tursiops aduncus (2) | GCA_003227395.1_ASM322739v1 | 2,503,928,010 | 16,249 | 1.24M (532) | 206.06K (3,351) | 79784 | 2018-06-14 | SAMN06289673 | PRJNA369596 | Ewha Womans University | mammals | ||
| Indo-pacific bottlenose dolphin | Tursiops aduncus (2) | GCA_011057625.1_ASM1105762v1 | 2,480,473,881 | 106,568 | 250.68K (2,642) | 8.73K (73,516) | 79784 | 2020-03-02 | SAMN13745611 | PRJNA598135 | Museum and Institute of Zoology | mammals | ||
| dingo | Canis lupus dingo (6) | GCA_003254725.2_ASM325472v2 | 2,349,862,946 | 159 | 64.25M (14) | 40.72M (20) | 286419 | 2020-09-11 | SAMN09397198 | PRJNA475652 | James Cook University | mammals | ||
| view | dingo | Canis lupus dingo (6) | GCF_012295265.1_UNSW_AlpineDingo_1.0 | 2,398,209,015 | 477 | 64.75M (15) | 23.11M (36) | 286419 | 2020-04-15 | SAMN14395261 | PRJNA613141 | University of New South Wales | mammals | |
| dingo | Canis lupus dingo (6) | GCA_003254725.1_ASM325472v1 | 2,439,831,507 | 2,444 | 34.45M (22) | 5.39M (142) | 286419 | 2018-06-18 | James Cook University | mammals | ||||
| dingo | Canis lupus dingo (6) | GCA_012295265.1_UNSW_AlpineDingo_1.0 | 2,398,209,015 | 477 | 64.75M (15) | 23.11M (36) | 286419 | 2020-04-15 | SAMN14395261 | PRJNA613141 | University of New South Wales | mammals | ||
| northern fur seal | Callorhinus ursinus (2) | GCA_003265705.1_ASM326570v1 | 2,706,852,204 | 14,229 | 31.51M (23) | 133.02K (5,909) | VU | 34884 | 2018-06-26 | SAMN09379881 | PRJNA475116 | Canada's Genomics Enterprise | mammals | |
| view | northern fur seal | Callorhinus ursinus (2) | GCF_003265705.1_ASM326570v1 | 2,706,868,872 | 14,230 | 31.51M (23) | 133.02K (5,909) | VU | 34884 | 2018-06-26 | SAMN09379881 | PRJNA475116 | Canada's Genomics Enterprise | mammals |
| view | puma | Puma concolor (3) | GCA_003327715.1_PumCon1.0 | 2,432,949,531 | 2,174 | 100.53M (8) | 27.19K (24,311) | 9696 | 2018-07-19 | SAMN08662999 | PRJNA437459 | Broad Institute | mammals | |
| puma | Puma concolor (3) | GCA_004123975.1_Pco_k61 | 2,591,702,724 | 152,272 | 193.87K (3,635) | 6.27K (112,733) | 9696 | 2019-01-31 | SAMN08196697 | PRJNA422772 | Duke University | mammals | ||
| view | puma | Puma concolor (3) | GCF_003327715.1_PumCon1.0 | 2,432,966,684 | 2,175 | 100.53M (8) | 27.19K (24,311) | 9696 | 2018-07-19 | SAMN08662999 | PRJNA437459 | Broad Institute | mammals | |
| steppe mouse | Mus spicilegus | GCA_003336285.1_MUSP714 | 2,496,083,520 | 37,536 | 2.20M (335) | 30.92K (23,208) | 10103 | 2018-07-23 | SAMN08141584 | PRJNA421365 | Oklahoma State Universtiy | mammals | ||
| American black bear | Ursus americanus (3) | GCA_003344425.1_ASM334442v1 | 2,588,393,916 | 111,495 | 189.90K (3,807) | 27.25K (26,482) | 9643 | 2018-07-27 | SAMN04908966 | PRJNA319796 | Jackson Laboratory | mammals | ||
| American black bear | Ursus americanus (3) | GCA_020975775.1_gsc_jax_bbear_1.0 | 2,351,948,976 | 2,213 | 13.88M (43) | 9643 | 2021-11-24 | SAMN22511336 | PRJNA319796 | Jackson Laboratory | mammals | |||
| view | American black bear (UA15103 2021) | Ursus americanus (3) | GCF_020975775.1_gsc_jax_bbear_1.0 | 2,351,964,450 | 2,213 | 13.88M (43) | 9643 | 2021-11-24 | SAMN22511336 | PRJNA319796 | Jackson Laboratory | mammals | ||
| view | hybrid cattle | Bos indicus x Bos taurus (11) | GCA_003369685.2_UOA_Angus_1 | 2,580,764,822 | 1,435 | 102.76M (11) | 37.06M (23) | 30522 | 2018-11-30 | SAMN08473802 | PRJNA432857 | University of Adelaide | mammals | |
| hybrid cattle | Bos indicus x Bos taurus (11) | GCA_003369695.2_UOA_Brahman_1 | 2,680,969,395 | 1,251 | 104.47M (11) | 26.76M (32) | 30522 | 2018-11-30 | SAMN08473802 | PRJNA432857 | University of Adelaide | mammals | ||
| hybrid cattle | Bos indicus x Bos taurus (11) | GCA_012069665.1_cow.Unzip_primary | 2,735,468,733 | 1,690 | 40.46M (21) | 30522 | 2020-04-06 | SAMN08473802 | PRJNA604814 | PacBio | mammals | |||
| hybrid cattle | Bos indicus x Bos taurus (11) | GCA_012070425.1_cow.Unzip_haplotigs | 2,386,439,937 | 5,364 | 1.22M (520) | 30522 | 2020-04-06 | SAMN08473802 | PRJNA604813 | PacBio | mammals | |||
| hybrid cattle | Bos indicus x Bos taurus (11) | GCA_012070445.1_cow.phase1_contigs | 2,737,559,693 | 1,690 | 40.47M (21) | 30522 | 2020-04-06 | SAMN08473802 | PRJNA604823 | PacBio | mammals | |||
| view | hybrid cattle | Bos indicus x Bos taurus (11) | GCF_003369695.1_UOA_Brahman_1 | 2,680,953,056 | 1,250 | 104.47M (11) | 26.76M (32) | 30522 | 2018-11-30 | SAMN08473802 | PRJNA432857 | University of Adelaide | mammals | |
| Arctic ground squirrel | Urocitellus parryii (2) | GCA_003426925.1_ASM342692v1 | 2,520,505,282 | 15,884 | 3.96M (175) | 91.01K (6,919) | 9999 | 2018-08-24 | SAMN09469529 | PRJNA477386 | UAF | mammals | ||
| view | Arctic ground squirrel | Urocitellus parryii (2) | GCF_003426925.1_ASM342692v1 | 2,520,505,282 | 15,884 | 3.96M (175) | 91.01K (6,919) | 9999 | 2018-08-24 | SAMN09469529 | PRJNA477386 | UAF | mammals | |
| lesser dawn bat | Eonycteris spelaea | GCA_003508835.1_Espe.v1 | 1,966,861,576 | 4,469 | 8.00M (70) | 58065 | 2018-09-07 | SAMN08225740 | PRJNA427241 | Duke-NUS Medical School | mammals | |||
| Indo-pacific humpbacked dolphin | Sousa chinensis (3) | GCA_003521335.2_S_chinensis_fine_genome_map | 2,339,085,850 | 20,903 | 9.01M (78) | 182.70K (3,883) | VU | 103600 | 2019-02-01 | SAMN08903183 | PRJNA449414 | Shantou university | mammals | |
| Indo-pacific humpbacked dolphin | Sousa chinensis (3) | GCA_007760645.1_ASM776064v1 | 2,338,882,461 | 23,368 | 19.44M (39) | 113.77K (6,070) | VU | 103600 | 2019-07-31 | SAMN10523266 | PRJNA508467 | BGI-SZ | mammals | |
| Indo-pacific humpbacked dolphin | Sousa chinensis (3) | GCA_003521335.1_ASM352133v1 | 2,275,477,722 | 64,905 | 165.55K (3,765) | VU | 103600 | 2018-9-10 | Shantou university | mammals | ||||
| brown bear | Ursus arctos horribilis (4) | GCA_003584765.2_ASM358476v2 | 2,328,642,862 | 6,672 | 36.71M (21) | 314.84K (2,191) | 116960 | 2018-09-20 | SAMN09907428 | PRJNA487641 | Canada's Genomic Enterprise | mammals | ||
| brown bear | Ursus arctos horribilis (4) | GCA_003584765.1_ASM358476v1 | 2,328,642,862 | 6,672 | 36.71M (21) | 314.84K (2,191) | 116960 | 2018-09-20 | Canada's Genomic Enterprise | mammals | ||||
| view | yellow-bellied marmot (SJ_83 v2.1 2019) | Marmota flaviventris (6) | GCF_003676075.3_GSC_YBM_2.1 | 2,579,539,323 | 33,524 | 11.41M (62) | n/a | n/a | n/a | mammals | ||||
| yellow-bellied marmot | Marmota flaviventris (6) | GCA_003676075.1_ASM367607v1 | 2,582,142,248 | 32,915 | 17.18M (45) | 93162 | 2018-10-22 | Canada's Genomic Enterprise | mammals | |||||
| yellow-bellied marmot | Marmota flaviventris (6) | GCA_003676075.2_GSC_YBM_2.0 | 2,581,339,348 | 33,623 | 11.41M (62) | 143.68K (5,019) | 93162 | 2019-05-24 | SAMN10078668 | PRJNA491472 | Canada's Genomic Enterprise | mammals | ||
| view | yellow-bellied marmot | Marmota flaviventris (6) | GCF_003676075.1_ASM367607v1 | 2,582,142,248 | 32,915 | 17.18M (45) | 130.36K (5,527) | 93162 | 2018-10-22 | Canada's Genomic Enterprise | mammals | |||
| view | yellow-bellied marmot | Marmota flaviventris (6) | GCF_003676075.2_GSC_YBM_2.0 | 2,581,355,786 | 33,624 | 11.41M (62) | 143.68K (5,019) | 93162 | 2019-05-24 | SAMN10078668 | PRJNA491472 | Canada's Genomic Enterprise | mammals | |
| Pacific white-sided dolphin | Lagenorhynchus obliquidens (2) | GCA_003676395.1_ASM367639v1 | 2,334,450,779 | 5,421 | 28.37M (22) | 255.78K (2,823) | 90247 | 2018-10-23 | SAMN09386610 | PRJNA475306 | Canada's Genomic Enterprise | mammals | ||
| view | Pacific white-sided dolphin | Lagenorhynchus obliquidens (2) | GCF_003676395.1_ASM367639v1 | 2,334,467,171 | 5,422 | 28.37M (22) | 255.78K (2,823) | 90247 | 2018-10-23 | SAMN09386610 | PRJNA475306 | Canada's Genomic Enterprise | mammals | |
| mule deer | Odocoileus hemionus sitkensis | GCA_003697985.1_ASM369798v1 | 2,324,921,134 | 358,334 | 9.68K (69,436) | 9.49K (70,478) | 9878 | 2018-10-30 | SAMN09430949 | PRJNA476345 | Canada's Genomic Enterprise | mammals | ||
| American badger | Taxidea taxus jeffersonii | GCA_003697995.1_ASM369799v1 | 2,416,005,247 | 145,161 | 54.56K (12,116) | 37.75K (17,692) | 2282171 | 2018-10-30 | SAMN09519665 | PRJNA478572 | Canada's Genomic Enterprise | mammals | ||
| oldfield mouse | Peromyscus polionotus subgriseus (2) | GCA_003704135.2_HU_Ppol_1.3.3 | 2,645,110,392 | 5,292 | 117.60M (9) | 13.22K (52,261) | 369710 | 2019-04-26 | SAMN10150432 | PRJNA494229 | Harvard University / Howard Hughes Medical Institute | mammals | ||
| oldfield mouse | Peromyscus polionotus subgriseus (2) | GCA_003704135.1_HU_Ppol_1.3 | 2,645,110,400 | 5,292 | 117.60M (9) | 13.22K (52,261) | 369710 | 2018-11-01 | Harvard University / Howard Hughes Medical Institute | mammals | ||||
| Hog deer | Axis porcinus | GCA_003798545.1_ASM379854v1 | 2,676,163,295 | 136,093 | 20.76M (39) | 172.76K (4,294) | EN | 57737 | 2018-11-20 | SAMN09386826 | PRJNA475327 | Novogene Bioinformatics Technology Corporation | mammals | |
| gemsbok | Oryx gazella (2) | GCA_003945745.1_UCDavis_Ogaz_1 | 2,762,920,344 | 31,177 | 1.58M (517) | 19.50K (40,580) | 9958 | 2018-12-14 | SAMN09604855 | PRJNA479821 | University of California Davis | mammals | ||
| gemsbok | Oryx gazella (2) | GCA_006410575.1_GMB | 2,768,889,188 | 56,922 | 1.57M (519) | 19.46K (40,733) | 9958 | 2019-06-24 | SAMN08714510 | PRJNA438286 | Northwestern Polytechnical University | mammals | ||
| view | banded mongoose | Mungos mungo | GCA_004023785.1_MunMun_v1_BIUU | 2,448,211,634 | 312,364 | 236.50K (2,886) | 180.70K (3,832) | 210652 | 2019-01-15 | SAMN07678097 | PRJNA399406 | Broad Institute | mammals | |
| view | jaguar | Panthera onca | GCA_004023805.1_PanOnc_v1_BIUU | 2,504,534,411 | 438,792 | 116.57K (6,057) | 62.84K (11,626) | 9690 | 2019-01-15 | SAMN07678103 | PRJNA399411 | Broad Institute | mammals | |
| view | Arctic fox | Vulpes lagopus (4) | GCA_004023825.1_VulLag_v1_BIUU | 2,688,561,625 | 1,263,345 | 102.05K (6,892) | 73.98K (9,828) | 494514 | 2019-01-15 | SAMN07678118 | PRJNA399424 | Broad Institute | mammals | |
| Arctic fox | Vulpes lagopus (4) | GCA_018345385.1_ASM1834538v1 | 2,345,533,697 | 928 | 131.54M (8) | 33.46M (24) | 494514 | 2021-05-12 | SAMN16815335 | PRJNA678849 | Hebei Normal University of Science and Technology | mammals | ||
| Arctic fox | Vulpes lagopus (4) | GCA_018835635.1_NRM_Vlagopus_v1 | 2,358,711,048 | 3,726 | 132.43M (8) | 101.55K (6,420) | 494514 | 2021-06-10 | SAMN18056818 | PRJNA704825 | Swedish Museum of Natural History | mammals | ||
| view | Arctic fox | Vulpes lagopus (4) | GCF_018345385.1_ASM1834538v1 | 2,345,550,353 | 929 | 131.54M (8) | 33.46M (24) | 494514 | 2021-05-12 | SAMN16815335 | PRJNA678849 | Hebei Normal University of Science and Technology | mammals | |
| view | dwarf mongoose | Helogale parvula | GCA_004023845.1_HelPar_v1_BIUU | 2,392,471,390 | 189,370 | 179.12K (3,602) | 113.57K (5,829) | 210647 | 2019-01-15 | SAMN07678086 | PRJNA399396 | Broad Institute | mammals | |
| view | Northern elephant seal | Mirounga angustirostris (4) | GCA_004023865.1_MirAng_v1_BIUU | 2,407,319,723 | 321,256 | 64.64K (10,757) | 52.83K (13,291) | 9716 | 2019-01-15 | SAMN07678016 | PRJNA399341 | Broad Institute | mammals | |
| view | Northern elephant seal (2021 DNA Zoo) | Mirounga angustirostris (4) | GCF_021288785.1_ASM2128878v2 | 2,366,166,981 | 142,455 | 139.68M (7) | 76.19K (8,919) | 9716 | 2021-12-26 | SAMN13072016 | PRJNA512907 | DNA Zoo | mammals | |
| view | fossa | Cryptoprocta ferox | GCA_004023885.1_CryFer_v1_BIUU | 2,458,846,334 | 464,036 | 173.47K (3,830) | 128.64K (5,252) | VU | 94188 | 2019-01-15 | SAMN07678074 | PRJNA399384 | Broad Institute | mammals |
| view | meerkat | Suricata suricatta (3) | GCA_004023905.1_SurSur_v1_BIUU | 2,471,813,441 | 349,868 | 186.74K (3,579) | 148.49K (4,579) | 37032 | 2019-01-15 | SAMN07678040 | PRJNA399357 | Broad Institute | mammals | |
| meerkat | Suricata suricatta (3) | GCA_006229205.1_meerkat_22Aug2017_6uvM2_HiC | 2,353,578,744 | 63,791 | 141.45M (8) | 75.41K (8,917) | 37032 | 2019-07-03 | SAMN11840572 | PRJNA540846 | DNA Zoo | mammals | ||
| view | meerkat | Suricata suricatta (3) | GCF_006229205.1_meerkat_22Aug2017_6uvM2_HiC | 2,353,578,744 | 63,791 | 141.45M (8) | 75.41K (8,917) | 37032 | 2019-07-03 | SAMN11840572 | PRJNA540846 | DNA Zoo | mammals | |
| view | black-footed cat | Felis nigripes | GCA_004023925.1_FelNig_v1_BIUU | 2,428,424,918 | 590,124 | 18.63K (35,821) | 16.01K (42,635) | VU | 61379 | 2019-01-15 | SAMN07678084 | PRJNA399394 | Broad Institute | mammals |
| view | western spotted skunk | Spilogale gracilis | GCA_004023965.1_SpiGra_v1_BIUU | 2,463,318,012 | 422,009 | 85.97K (8,237) | 63.05K (11,351) | 30551 | 2019-01-15 | SAMN07678050 | PRJNA399437 | Broad Institute | mammals | |
| view | California sea lion | Zalophus californianus (8) | GCA_004024565.1_ZalCal_v1_BIUU | 2,519,860,747 | 571,996 | 132.38K (5,281) | 90.57K (7,984) | 9704 | 2019-01-15 | SAMN07678053 | PRJNA399369 | Broad Institute | mammals | |
| California sea lion | Zalophus californianus (8) | GCA_009762295.2_mZalCal1.alt.v2 | 1,970,935,876 | 3,096 | 1.32M (437) | 9704 | 2020-06-12 | SAMN12368149 | PRJNA559674 | Vertebrate Genomes Project | mammals | |||
| California sea lion | Zalophus californianus (8) | GCA_009762305.2_mZalCal1.pri.v2 | 2,409,685,310 | 47 | 147.12M (7) | 32.63M (23) | 9704 | 2020-07-14 | SAMN12368149 | PRJNA559673 | Vertebrate Genomes Project | mammals | ||
| California sea lion | Zalophus californianus (8) | GCA_900631625.1_zalCal2.2 | 2,372,352,887 | 10,422 | 143.42M (7) | 97.66K (7,181) | 9704 | 2018-12-07 | SAMEA5145493 | PRJEB30031 | LMU | mammals | ||
| view | California sea lion | Zalophus californianus (8) | GCF_009762305.2_mZalCal1.pri.v2 | 2,409,685,272 | 47 | 147.12M (7) | 32.63M (23) | 9704 | 2020-07-14 | SAMN12368149 | PRJNA559673 | Vertebrate Genomes Project | mammals | |
| view | California sea lion | Zalophus californianus (8) | GCA_009762295.1_mZalCal1.alt | 1,970,798,971 | 3,093 | 1.32M (437) | 9704 | 2019-12-17 | Vertebrate Genomes Project | mammals | ||||
| view | California sea lion | Zalophus californianus (8) | GCA_009762305.1_mZalCal1.pri | 2,408,658,503 | 43 | 146.93M (7) | 60.55M (14) | 9704 | 2019-12-18 | Vertebrate Genomes Project | mammals | |||
| view | Asian palm civet | Paradoxurus hermaphroditus | GCA_004024585.1_ParHer_v1_BIUU | 2,477,229,103 | 438,125 | 71.82K (8,704) | 62.87K (10,106) | 71117 | 2019-01-15 | SAMN07678048 | PRJNA399364 | Broad Institute | mammals | |
| view | giant otter | Pteronura brasiliensis | GCA_004024605.1_PteBra_v1_BIUU | 2,602,275,310 | 644,728 | 119.02K (5,906) | 90.88K (7,780) | EN | 9672 | 2019-01-15 | SAMN07678049 | PRJNA399365 | Broad Institute | mammals |
| view | ratel | Mellivora capensis | GCA_004024625.1_MelCap_v1_BIUU | 3,091,173,380 | 2,068,312 | 59.14K (12,829) | 50.21K (15,366) | 9664 | 2019-01-15 | SAMN07678094 | PRJNA399403 | Broad Institute | mammals | |
| view | Stephens's kangaroo rat | Dipodomys stephensi | GCA_004024685.1_DipSte_v1_BIUU | 2,346,418,196 | 1,269,643 | 36.81K (16,981) | 30.71K (20,402) | VU | 323379 | 2019-01-15 | SAMN07678080 | PRJNA399390 | Broad Institute | mammals |
| Siberian musk deer | Moschus moschiferus (3) | GCA_004024705.2_MosMos_v2_BIUU_UCD | 3,069,608,437 | 1,072,499 | 11.73M (78) | 34.78K (23,554) | VU | 68415 | 2019-07-15 | SAMN07678096 | PRJNA399405 | Broad Institute | mammals | |
| Siberian musk deer | Moschus moschiferus (3) | GCA_011751665.1_IMAU_Mmos_1.0 | 2,703,124,251 | 13,392 | 7.53M (105) | 72.48K (9,827) | VU | 68415 | 2020-03-25 | SAMN12872837 | PRJNA574937 | Inner Mongolia Agricultura University | mammals | |
| view | Siberian musk deer | Moschus moschiferus (3) | GCA_004024705.1_MosMos_v1_BIUU | 2,966,355,811 | 1,175,703 | 47.48K (16,940) | VU | 68415 | 2019-1-15 | Broad Institute | mammals | |||
| view | Chacoan peccary | Catagonus wagneri (2) | GCA_004024745.2_CatWag_v2_BIUU_UCD | 2,640,067,814 | 1,183,730 | 19.20M (43) | 65.97K (10,972) | EN | 51154 | 2019-07-15 | SAMN07678067 | PRJNA399378 | Broad Institute | mammals |
| view | Chacoan peccary | Catagonus wagneri (2) | GCA_004024745.1_CatWag_v1_BIUU | 2,593,589,281 | 1,230,162 | 91.72K (7,860) | EN | 51154 | 2019-1-15 | Broad Institute | mammals | |||
| view | meadow jumping mouse | Zapus hudsonius | GCA_004024765.1_ZapHud_v1_BIUU | 2,611,189,839 | 1,158,100 | 26.35K (24,540) | 23.35K (28,152) | 160400 | 2019-01-15 | SAMN07678139 | PRJNA399434 | Broad Institute | mammals | |
| view | South African ground squirrel | Xerus inauris | GCA_004024805.1_XerIna_v1_BIUU | 2,601,418,404 | 577,370 | 83.86K (8,399) | 64.05K (10,993) | 234690 | 2019-01-15 | SAMN07678119 | PRJNA399425 | Broad Institute | mammals | |
| view | stripe-headed round-eared bat | Tonatia saurophila | GCA_004024845.1_TonSau_v1_BIUU | 2,105,886,965 | 249,810 | 165.56K (3,525) | 141.65K (4,127) | 171122 | 2019-01-15 | SAMN07678031 | PRJNA399356 | Broad Institute | mammals | |
| view | Asiatic tapir | Tapirus indicus | GCA_004024905.1_TapInd_v1_BIUU | 2,425,203,111 | 280,135 | 308.93K (2,188) | 225.79K (3,061) | EN | 9802 | 2019-01-15 | SAMN07678113 | PRJNA399421 | Broad Institute | mammals |
| view | eastern mole | Scalopus aquaticus | GCA_004024925.1_ScaAqu_v1_BIUU | 2,068,871,057 | 640,296 | 94.88K (6,185) | 72.42K (8,139) | 71119 | 2019-01-15 | SAMN07678045 | PRJNA399361 | Broad Institute | mammals | |
| view | gracile shrew mole | Uropsilus gracilis | GCA_004024945.1_UroGra_v1_BIUU | 2,112,710,047 | 723,835 | 55.03K (9,717) | 43.62K (12,579) | 182669 | 2019-01-15 | SAMN07678046 | PRJNA399362 | Broad Institute | mammals | |
| Java mouse-deer | Tragulus javanicus (3) | GCA_004024965.2_ASM402496v2 | 2,589,955,488 | 1,082,489 | 14.08M (49) | 80.23K (8,598) | 9849 | 2019-07-15 | SAMN07678116 | PRJNA399456 | Broad Institute | mammals | ||
| view | Java mouse-deer | Tragulus javanicus (3) | GCA_004024965.1_TraJav_v1_BIUU | 2,582,625,763 | 1,156,990 | 86.67K (7,807) | 9849 | 2019-1-15 | Broad Institute | mammals | ||||
| view | even-toed ungulates | Saiga tatarica | GCA_004024985.1_SaiTat_v1_BIUU | 2,876,186,568 | 1,772,199 | 6.45K (119,404) | 6.41K (122,152) | CR | 34875 | 2019-01-15 | SAMN07678151 | PRJNA399418 | Broad Institute | mammals |
| view | Brazilian free-tailed bat | Tadarida brasiliensis | GCA_004025005.1_TadBra_v1_BIUU | 2,709,928,648 | 1,067,615 | 24.31K (25,996) | 22.62K (28,353) | 9438 | 2019-01-15 | SAMN07678131 | PRJNA399430 | Broad Institute | mammals | |
| view | Brazilian tapir | Tapirus terrestris | GCA_004025025.1_TapTer_v1_BIUU | 2,571,458,752 | 803,506 | 186.38K (3,790) | 164.19K (4,276) | VU | 9801 | 2019-01-15 | SAMN07678114 | PRJNA399422 | Broad Institute | mammals |
| view | hispid cotton rat | Sigmodon hispidus | GCA_004025045.1_SigHis_v1_BIUU | 2,730,600,022 | 883,546 | 101.37K (7,354) | 67.98K (11,141) | 42415 | 2019-01-15 | SAMN07678138 | PRJNA399433 | Broad Institute | mammals | |
| view | Greater cane rat | Thryonomys swinderianus | GCA_004025085.1_ThrSwi_v1_BIUU | 2,662,148,533 | 1,889,641 | 21.52K (31,098) | 18.95K (35,725) | 10169 | 2019-01-15 | SAMN07678129 | PRJNA399470 | Broad Institute | mammals | |
| view | southern tamandua | Tamandua tetradactyla (3) | GCA_004025105.1_TamTet_v1_BIUU | 3,849,374,830 | 2,144,204 | 19.79K (45,977) | 18.65K (49,527) | 48850 | 2019-01-15 | SAMN07678112 | PRJNA399420 | Broad Institute | mammals | |
| view | placentals | Tolypeutes matacus | GCA_004025125.1_TolMat_v1_BIUU | 4,115,028,163 | 2,925,507 | 10.22K (92,513) | 9.44K (105,483) | 183749 | 2019-01-15 | SAMN07678115 | PRJNA399423 | Broad Institute | mammals | |
| hoary bamboo rat | Rhizomys pruinosus (2) | GCA_004026225.1_RhiPru_v1_BIUU | 3,937,265,448 | 4,150,536 | 2.63K (376,357) | 2.63K (377,334) | 53275 | 2019-01-16 | SAMN07678150 | PRJNA399452 | Broad Institute | mammals | ||
| hoary bamboo rat | Rhizomys pruinosus (2) | GCA_009823505.1_RhiPru_1.0 | 3,711,971,808 | 15,764 | 2.20M (489) | 103.29K (9,781) | 53275 | 2019-12-31 | SAMN12815341 | PRJNA573514 | Chinese Academy of Sciences | mammals | ||
| view | Schreibers' long-fingered bat | Miniopterus schreibersii | GCA_004026525.1_MinSch_v1_BIUU | 1,775,846,775 | 177,620 | 108.71K (4,781) | 82.54K (6,368) | VU | 9433 | 2019-01-16 | SAMN07678147 | PRJNA399366 | Broad Institute | mammals |
| view | Antillean ghost-faced bat | Mormoops blainvillei | GCA_004026545.1_MorMeg_v1_BIUU | 2,111,750,309 | 205,259 | 156.29K (3,693) | 142.68K (4,104) | 118852 | 2019-01-16 | SAMN07678133 | PRJNA399472 | Broad Institute | mammals | |
| view | reindeer | Rangifer tarandus (2) | GCA_004026565.1_RanTarSib_v1_BIUU | 2,897,299,934 | 1,360,739 | 89.06K (8,915) | 77.67K (10,302) | VU | 9870 | 2019-01-16 | SAMN07678109 | PRJNA399416 | Broad Institute | mammals |
| view | greater bulldog bat | Noctilio leporinus | GCA_004026585.1_NocLep_v1_BIUU | 2,098,501,394 | 298,222 | 191.49K (2,920) | 135.65K (4,194) | 94963 | 2019-01-16 | SAMN07678134 | PRJNA399473 | Broad Institute | mammals | |
| view | muskrat | Ondatra zibethicus | GCA_004026605.1_OndZib_v1_BIUU | 2,562,752,769 | 565,356 | 89.09K (7,754) | 73.75K (9,587) | 10060 | 2019-01-16 | SAMN07678059 | PRJNA399451 | Broad Institute | mammals | |
| view | common pipistrelle | Pipistrellus pipistrellus (3) | GCA_004026625.1_PipPip_v1_BIUU | 2,090,670,443 | 726,104 | 33.99K (15,278) | 26.71K (20,197) | 59474 | 2019-01-16 | SAMN07678120 | PRJNA399427 | Broad Institute | mammals | |
| common pipistrelle | Pipistrellus pipistrellus (3) | GCA_903992515.1_mPipPip1.1_alternate_haplotype | 1,579,816,813 | 10,447 | 230.23K (1,928) | 229.98K (1,929) | 59474 | 2020-08-04 | SAMEA994724 | PRJEB39565 | SC | mammals | ||
| common pipistrelle | Pipistrellus pipistrellus (3) | GCA_903992545.1_mPipPip1.1 | 1,763,439,233 | 323 | 94.93M (6) | 4.45M (108) | 59474 | 2020-08-06 | SAMEA994724 | PRJEB39564 | SC | mammals | ||
| view | Little tube-nosed bat | Murina aurata feae | GCA_004026665.1_MurFea_v1_BIUU | 2,331,551,382 | 880,177 | 26.05K (23,840) | 23.40K (26,925) | 1453894 | 2019-01-16 | SAMN07678148 | PRJNA399367 | Broad Institute | mammals | |
| view | narwhal | Monodon monoceros (6) | GCA_004026685.1_MonMon_M_v1_BIUU | 2,472,545,502 | 644,873 | 86.77K (8,168) | 67.02K (10,490) | 40151 | 2019-01-16 | SAMN07678024 | PRJNA399349 | Broad Institute | mammals | |
| narwhal | Monodon monoceros (6) | GCA_004027045.1_MonMon_v1_BIUU | 2,546,711,041 | 882,704 | 88.92K (8,228) | 70.97K (10,323) | 40151 | 2019-01-16 | SAMN07678023 | PRJNA399349 | Broad Institute | mammals | ||
| narwhal | Monodon monoceros (6) | GCA_005125345.1_ASM512534v1 | 2,350,881,526 | 21,006 | 1.48M (464) | 10.04K (63,739) | 40151 | 2019-05-03 | SAMN10519625 | PRJNA508363 | University of Copenhagen | mammals | ||
| narwhal | Monodon monoceros (6) | GCA_005190385.2_NGI_Narwhal_1 | 2,355,591,342 | 6,973 | 107.57M (9) | 255.33K (2,676) | 40151 | 2019-05-06 | SAMN10872456 | PRJNA520934 | The Narwhal Genome Initiative | mammals | ||
| view | narwhal | Monodon monoceros (6) | GCF_005190385.1_NGI_Narwhal_1 | 2,355,574,979 | 6,972 | 107.57M (9) | 255.33K (2,676) | 40151 | 2019-05-06 | SAMN10872456 | PRJNA520934 | The Narwhal Genome Initiative | mammals | |
| view | Talazac's shrew tenrec | Microgale talazaci | GCA_004026705.1_MicTal_v1_BIUU | 3,236,147,583 | 788,895 | 65.14K (12,271) | 56.95K (14,134) | 176115 | 2019-01-16 | SAMN07678058 | PRJNA399450 | Broad Institute | mammals | |
| view | southern grasshopper mouse | Onychomys torridus (3) | GCA_004026725.1_OnyTor_v1_BIUU | 3,202,219,269 | 2,261,735 | 20.88K (35,645) | 18.29K (41,931) | 38674 | 2019-01-16 | SAMN07678022 | PRJNA399348 | Broad Institute | mammals | |
| southern grasshopper mouse | Onychomys torridus (3) | GCA_903995425.1_mOncTor1.1 | 2,468,394,440 | 2,949 | 112.72M (9) | 2.28M (308) | 38674 | 2020-08-21 | SAMEA104026389 | PRJEB39770 | SC | mammals | ||
| view | southern grasshopper mouse | Onychomys torridus (3) | GCF_903995425.1_mOncTor1.1 | 2,468,394,440 | 2,949 | 112.72M (9) | 2.28M (308) | 38674 | 2020-08-21 | SAMEA104026389 | PRJEB39770 | SC | mammals | |
| view | giant anteater | Myrmecophaga tridactyla | GCA_004026745.1_MyrTri_v1_BIUU | 3,547,273,050 | 1,621,408 | 41.26K (22,180) | 36.43K (25,227) | VU | 71006 | 2019-01-16 | SAMN07678098 | PRJNA399407 | Broad Institute | mammals |
| view | bats | Micronycteris hirsuta | GCA_004026765.1_MicHir_v1_BIUU | 2,314,654,405 | 550,090 | 68.87K (8,795) | 62.96K (9,798) | 148065 | 2019-01-16 | SAMN07678146 | PRJNA399354 | Broad Institute | mammals | |
| view | red bat | Lasiurus borealis | GCA_004026805.1_LasBor_v1_BIUU | 2,857,590,849 | 518,900 | 38.54K (18,686) | 35.16K (20,680) | 258930 | 2019-01-16 | SAMN07678027 | PRJNA399352 | Broad Institute | mammals | |
| view | Nilgiri tahr | Hemitragus hylocrius | GCA_004026825.1_HemHyl_v1_BIUU | 2,715,042,536 | 469,163 | 85.34K (9,258) | 66.55K (11,861) | 330464 | 2019-01-16 | SAMN07678087 | PRJNA399397 | Broad Institute | mammals | |
| view | yellow-spotted hyrax | Heterohyrax brucei | GCA_004026845.1_HetBruBak_v1_BIUU | 3,618,151,652 | 967,933 | 67.90K (14,115) | 62.84K (15,385) | 77598 | 2019-01-16 | SAMN07678088 | PRJNA399398 | Broad Institute | mammals | |
| view | snowshoe hare | Lepus americanus | GCA_004026855.1_LepAme_v1_BIUU | 3,123,271,264 | 1,592,829 | 16.73K (45,191) | 15.06K (51,725) | 48086 | 2019-01-16 | SAMN07678042 | PRJNA399359 | Broad Institute | mammals | |
| view | crested porcupine | Hystrix cristata | GCA_004026905.1_HysCri_v1_BIUU | 2,470,917,678 | 1,136,598 | 64.77K (10,348) | 57.10K (11,814) | 10137 | 2019-01-16 | SAMN07678090 | PRJNA399401 | Broad Institute | mammals | |
| view | bighorn sheep | Ovis canadensis | GCA_004026945.1_OviCan_v1_BIUU | 2,863,658,823 | 1,048,136 | 69.40K (11,415) | 55.97K (14,306) | 37174 | 2019-01-16 | SAMN07678102 | PRJNA399410 | Broad Institute | mammals | |
| view | dassie-rat | Petromus typicus | GCA_004026965.1_PetTyp_v1_BIUU | 2,389,366,989 | 910,679 | 35.77K (16,938) | 29.92K (20,963) | 10183 | 2019-01-16 | SAMN07678021 | PRJNA399347 | Broad Institute | mammals | |
| view | bats | Myotis myotis (3) | GCA_004026985.1_MyoMyo_v1_BIUU | 2,294,472,406 | 1,045,197 | 21.82K (27,248) | 19.32K (31,447) | 51298 | 2019-01-16 | SAMN07678038 | PRJNA399444 | Broad Institute | mammals | |
| bats | Myotis myotis (3) | GCA_014108235.1_mMyoMyo1.p | 2,002,797,876 | 93 | 94.45M (7) | 12.51M (41) | 51298 | 2020-08-07 | SAMN14734277 | PRJNA628559 | Bat1K | mammals | ||
| view | bats | Myotis myotis (3) | GCF_014108235.1_mMyoMyo1.p | 2,002,797,769 | 93 | 94.45M (7) | 12.51M (41) | 51298 | 2020-08-07 | SAMN14734277 | PRJNA628559 | Bat1K | mammals | |
| view | hazel dormouse | Muscardinus avellanarius | GCA_004027005.1_MusAve_v1_BIUU | 2,527,147,110 | 466,805 | 59.01K (12,037) | 44.29K (16,126) | 39082 | 2019-01-16 | SAMN07678014 | PRJNA399340 | Broad Institute | mammals | |
| view | nutria | Myocastor coypus | GCA_004027025.1_MyoCoy_v1_BIUU | 2,903,175,784 | 1,669,667 | 35.98K (21,157) | 28.45K (27,183) | 10157 | 2019-01-16 | SAMN07678020 | PRJNA399346 | Broad Institute | mammals | |
| view | Sowerby's beaked whale | Mesoplodon bidens | GCA_004027085.1_MesBid_v1_BIUU | 2,797,694,783 | 1,801,720 | 33.53K (21,694) | 28.96K (25,790) | 48745 | 2019-01-16 | SAMN07678145 | PRJNA399476 | Broad Institute | mammals | |
| view | social tuco-tuco | Ctenomys sociabilis | GCA_004027165.1_CteSoc_v1_BIUU | 2,834,814,551 | 807,571 | 49.07K (15,899) | 37.56K (20,986) | CR | 43321 | 2019-01-16 | SAMN07678051 | PRJNA399368 | Broad Institute | mammals |
| view | Fat dormouse | Glis glis | GCA_004027185.1_GliGli_v1_BIUU | 2,462,087,207 | 433,430 | 30.34K (22,644) | 26.06K (26,480) | 41261 | 2019-01-16 | SAMN07678015 | PRJNA399435 | Broad Institute | mammals | |
| view | northern gundi | Ctenodactylus gundi | GCA_004027205.1_CteGun_v1_BIUU | 2,322,471,743 | 860,073 | 354.55K (1,820) | 218.54K (3,042) | 10166 | 2019-01-16 | SAMN07678018 | PRJNA399344 | Broad Institute | mammals | |
| view | Patagonian cavy | Dolichotis patagonum | GCA_004027295.1_DolPat_v1_BIUU | 3,289,614,431 | 1,905,764 | 31.03K (22,098) | 27.98K (25,336) | 29091 | 2019-01-16 | SAMN07678081 | PRJNA399391 | Broad Institute | mammals | |
| black rhinoceros | Diceros bicornis (2) | GCA_004027315.2_DicBicMic_v2_BIUU_UCD | 3,060,207,893 | 1,981,226 | 14.66M (54) | 91.00K (8,779) | CR | 9805 | 2019-07-15 | SAMN07678078 | PRJNA399388 | Broad Institute | mammals | |
| view | black rhinoceros | Diceros bicornis (2) | GCA_004027315.1_DicBicMic_v1_BIUU | 3,020,704,222 | 2,022,658 | 115.50K (6,876) | CR | 9805 | 2019-1-16 | Broad Institute | mammals | |||
| view | bats | Macroglossus sobrinus | GCA_004027375.1_MacSob_v1_BIUU | 1,897,644,983 | 171,985 | 453.40K (1,154) | 338.39K (1,573) | 326083 | 2019-01-16 | SAMN07678028 | PRJNA399443 | Broad Institute | mammals | |
| view | Cantor's roundleaf bat | Hipposideros galeritus | GCA_004027415.1_HipGal_v1_BIUU | 2,440,750,851 | 840,200 | 37.98K (17,178) | 33.70K (19,815) | 58069 | 2019-01-16 | SAMN07678026 | PRJNA399442 | Broad Institute | mammals | |
| view | Jamaican fruit-eating bat | Artibeus jamaicensis (4) | GCA_004027435.1_ArtJam_v1_BIUU | 2,424,784,351 | 794,376 | 35.35K (16,717) | 32.37K (18,729) | 9417 | 2019-01-16 | SAMN07678132 | PRJNA399471 | Broad Institute | mammals | |
| Jamaican fruit-eating bat | Artibeus jamaicensis (4) | GCA_014825515.1_WHU_Ajam_v2 | 2,207,601,705 | 56,739 | 2.59M (219) | 374.93K (1,580) | 9417 | 2020-09-30 | SAMN12273914 | PRJNA554589 | College of Life Sciences at Wuhan University | mammals | ||
| view | Jamaican fruit-eating bat | Artibeus jamaicensis (4) | GCF_014825515.1_WHU_Ajam_v2 | 2,207,618,356 | 56,740 | 2.59M (219) | 374.93K (1,580) | 9417 | 2020-09-30 | SAMN12273914 | PRJNA554589 | College of Life Sciences at Wuhan University | mammals | |
| view | capybara | Hydrochoerus hydrochaeris (3) | GCA_004027455.1_HydHyd_v1_BIUU | 2,734,590,088 | 655,342 | 202.22K (3,717) | 148.45K (5,131) | 10149 | 2019-01-16 | SAMN07678143 | PRJNA399400 | Broad Institute | mammals | |
| capybara | Hydrochoerus hydrochaeris (3) | GCA_014189835.1_Capy_1.0 | 2,482,213,986 | 1,001,378 | 7.75K (81,710) | 7.19K (87,423) | 10149 | 2020-08-11 | SAMD00144944 | PRJDB7394 | Saitou Laboratory, Division of Population Genetics, Genetics, National Institute of Genetics | mammals | ||
| capybara | Hydrochoerus hydrochaeris (3) | GCA_015741225.1_Hydrochoerus_hydrochaeris_HiC | 2,590,838,763 | 343,877 | 71.05M (15) | 78.81K (8,795) | 10149 | 2020-12-04 | SAMN15801460 | PRJNA512907 | DNA Zoo | mammals | ||
| view | tailed tailless bat | Anoura caudifer | GCA_004027475.1_AnoCau_v1_BIUU | 2,206,589,520 | 337,255 | 185.02K (3,282) | 143.42K (4,323) | 27642 | 2019-01-16 | SAMN07678033 | PRJNA399350 | Broad Institute | mammals | |
| view | even-toed ungulates | Beatragus hunteri | GCA_004027495.1_BeaHun_v1_BIUU | 2,697,255,800 | 535,889 | 69.30K (11,525) | 57.44K (13,952) | CR | 59527 | 2019-01-16 | SAMN07678065 | PRJNA399375 | Broad Institute | mammals |
| pronghorn | Antilocapra americana (4) | GCA_004027515.2_AntAmePen_v2_BIUU_UCD | 2,955,306,661 | 1,585,152 | 18.85M (42) | 61.70K (11,912) | 9891 | 2019-07-15 | SAMN07678063 | PRJNA399373 | Broad Institute | mammals | ||
| pronghorn | Antilocapra americana (4) | GCA_007570785.1_GSC_phorn_1.0 | 2,509,063,228 | 22,443 | 18.74M (38) | 220.43K (3,148) | 9891 | 2019-07-12 | SAMN11091591 | PRJNA526246 | Canada's Genomic Enterprise | mammals | ||
| view | pronghorn | Antilocapra americana (4) | GCA_021018645.1_ASM2101864v1 | 2,669,373,955 | 66,453 | 1.46M (530) | 81.55K (9,212) | 9891 | 2021-12-01 | SAMN08712244 | PRJNA438286 | Northwestern Polytechnical University | mammals | |
| view | pronghorn | Antilocapra americana (4) | GCA_004027515.1_AntAmePen_v1_BIUU | 2,899,768,642 | 1,643,131 | 70.32K (10,303) | 9891 | 2019-1-16 | Broad Institute | mammals | ||||
| view | Egyptian spiny mouse | Acomys cahirinus | GCA_004027535.1_AcoCah_v1_BIUU | 2,306,070,819 | 371,342 | 65.41K (10,133) | 42.48K (15,859) | 10068 | 2019-01-16 | SAMN07678032 | PRJNA399339 | Broad Institute | mammals | |
| view | hog-nosed bat | Craseonycteris thonglongyai | GCA_004027555.1_CraTho_v1_BIUU | 2,272,093,077 | 1,224,256 | 25.76K (22,222) | 23.22K (25,352) | 208972 | 2019-01-16 | SAMN07678039 | PRJNA399445 | Broad Institute | mammals | |
| view | Gambian giant pouched rat | Cricetomys gambianus | GCA_004027575.1_CriGam_v1_BIUU | 2,397,721,602 | 1,102,952 | 110.05K (5,340) | 80.76K (7,273) | 10085 | 2019-01-16 | SAMN07678025 | PRJNA399436 | Broad Institute | mammals | |
| view | pacarana | Dinomys branickii | GCA_004027595.1_DinBra_v1_BIUU | 2,688,563,719 | 1,158,438 | 77.92K (9,284) | 64.81K (11,195) | 108858 | 2019-01-16 | SAMN07678079 | PRJNA399389 | Broad Institute | mammals | |
| view | insectivores | Crocidura indochinensis | GCA_004027635.1_CroInd_v1_BIUU | 3,082,217,326 | 2,415,412 | 4.93K (122,073) | 4.93K (127,392) | 876679 | 2019-01-16 | SAMN07678044 | PRJNA399360 | Broad Institute | mammals | |
| view | woodland dormouse | Graphiurus murinus | GCA_004027655.1_GraMur_v1_BIUU | 2,815,014,629 | 1,267,939 | 28.46K (21,033) | 22.14K (29,676) | 51346 | 2019-01-16 | SAMN07678085 | PRJNA399395 | Broad Institute | mammals | |
| view | Montane guinea pig | Cavia tschudii | GCA_004027695.1_CavTsc_v1_BIUU | 3,077,352,510 | 1,368,179 | 91.44K (8,528) | 64.81K (12,214) | 143287 | 2019-01-16 | SAMN07678017 | PRJNA399343 | Broad Institute | mammals | |
| view | Seba's short-tailed bat | Carollia perspicillata | GCA_004027735.1_CarPer_v1_BIUU | 2,689,411,905 | 1,925,339 | 10.74K (50,317) | 10.34K (53,521) | 40233 | 2019-01-16 | SAMN07678055 | PRJNA399439 | Broad Institute | mammals | |
| view | Brown-throated sloth | Bradypus variegatus | GCA_004027775.1_BraVar_v1_BIUU | 1,502,475,299 | 1,771,805 | 1.90K (138,004) | 1.90K (138,478) | 9355 | 2019-01-16 | SAMN07678054 | PRJNA399370 | Broad Institute | mammals | |
| view | northern white rhinoceros | Ceratotherium simum cottoni (2) | GCA_004027795.1_CerCot_v1_BIUU | 2,666,617,437 | 942,426 | 23.00K (32,993) | 21.20K (35,976) | 310713 | 2019-01-16 | SAMN07678069 | PRJNA399457 | Broad Institute | mammals | |
| view | southern two-toed sloth | Choloepus didactylus (4) | GCA_004027855.1_ChoDid_v1_BIUU | 3,390,661,301 | 2,532,333 | 7.29K (112,825) | 7.17K (117,573) | 27675 | 2019-01-16 | SAMN07678073 | PRJNA399383 | Broad Institute | mammals | |
| southern two-toed sloth | Choloepus didactylus (4) | GCA_015220235.1_mChoDid1.pri | 3,214,702,604 | 146 | 146.18M (9) | 20.99M (45) | 27675 | 2020-11-03 | SAMN12612024 | PRJNA561937 | Vertebrate Genomes Project | mammals | ||
| southern two-toed sloth | Choloepus didactylus (4) | GCA_015220265.1_mChoDid1.alt | 3,180,649,806 | 11,980 | 513.10K (1,655) | 512.74K (1,655) | 27675 | 2020-11-02 | SAMN12612024 | PRJNA561938 | Vertebrate Genomes Project | mammals | ||
| view | southern two-toed sloth | Choloepus didactylus (4) | GCF_015220235.1_mChoDid1.pri | 3,214,702,648 | 146 | 146.18M (9) | 20.99M (45) | 27675 | 2020-11-03 | SAMN12612024 | PRJNA561937 | Vertebrate Genomes Project | mammals | |
| view | mountain beaver | Aplodontia rufa | GCA_004027875.1_AplRuf_v1_BIUU | 3,005,535,537 | 1,279,526 | 37.81K (19,816) | 33.24K (22,822) | 51342 | 2019-01-16 | SAMN07678037 | PRJNA399342 | Broad Institute | mammals | |
| view | Gobi jerboa | Orientallactaga bullata | GCA_004027895.1_AllBul_v1_BIUU | 3,093,575,781 | 1,284,382 | 36.31K (21,056) | 30.65K (25,318) | 1041416 | 2019-01-16 | SAMN07678035 | PRJNA399447 | Broad Institute | mammals | |
| view | Desmarest's hutia | Capromys pilorides | GCA_004027915.1_CapPil_v1_BIUU | 3,023,850,356 | 2,352,358 | 4.08K (146,403) | 4.08K (149,937) | 34842 | 2019-01-16 | SAMN07678066 | PRJNA399377 | Broad Institute | mammals | |
| view | Screaming hairy armadillo | Chaetophractus vellerosus | GCA_004027955.1_ChaVel_v1_BIUU | 5,335,596,729 | 7,677,333 | 1.61K (572,240) | 1.61K (575,071) | 340076 | 2019-01-16 | SAMN07678071 | PRJNA399381 | Broad Institute | mammals | |
| Steller sea lion | Eumetopias jubatus (2) | GCA_004028035.1_ASM402803v1 | 2,418,246,527 | 7,471 | 14.02M (54) | 242.37K (2,995) | 34886 | 2019-01-15 | SAMN09402722 | PRJNA475770 | Canada's Genomic Enterprise | mammals | ||
| view | Steller sea lion | Eumetopias jubatus (2) | GCF_004028035.1_ASM402803v1 | 2,418,263,165 | 7,472 | 14.02M (54) | 34886 | 2019-01-15 | SAMN09402722 | PRJNA475770 | Canada's Genomic Enterprise | mammals | ||
| mule deer | Odocoileus hemionus hemionus | GCA_004115125.1_UofA_Ohem_1.0 | 2,343,701,333 | 16,208 | 838.76K (751) | 113.30K (5,445) | 9877 | 2019-01-30 | SAMN07977136 | PRJNA417092 | University of Alberta | mammals | ||
| view | pale spear-nosed bat | Phyllostomus discolor (8) | GCA_004115245.1_mPhyDis1_v1.h | 2,050,602,545 | 10,835 | 933.67K (602) | 933.67K (602) | 89673 | 2019-01-28 | Vertebrate Genomes Project | mammals | |||
| pale spear-nosed bat | Phyllostomus discolor (8) | GCA_004115245.2_mPhyDis1.alti.v3 | 2,051,656,167 | 10,857 | 931.87K (603) | 931.87K (603) | 89673 | 2020-05-11 | SAMN09948786 | PRJNA489142 | Vertebrate Genomes Project | mammals | ||
| pale spear-nosed bat | Phyllostomus discolor (8) | GCA_004126475.3_mPhyDis1.pri.v3 | 2,108,849,533 | 78 | 171.74M (6) | 6.89M (94) | 89673 | 2020-05-12 | SAMN09948786 | PRJNA489141 | Vertebrate Genomes Project | mammals | ||
| pale spear-nosed bat | Phyllostomus discolor (8) | GCA_014049915.1_MPI-CBG_DAmar_mPhyDis1.p_v1.0 | 2,094,526,522 | 42 | 171.08M (6) | 15.51M (32) | 89673 | 2020-08-03 | SAMN14734468 | PRJNA628578 | Bat1K | mammals | ||
| view | pale spear-nosed bat | Phyllostomus discolor (8) | GCF_004126475.2_mPhyDis1.pri.v3 | 2,108,832,841 | 77 | 171.74M (6) | 6.89M (94) | 89673 | 2020-05-12 | SAMN09948786 | PRJNA489141 | Vertebrate Genomes Project | mammals | |
| view | pale spear-nosed bat | Phyllostomus discolor (8) | GCF_004126475.1_mPhyDis1_v1.p | 2,117,764,065 | 141 | 110.24M (6) | 6.89M (94) | 89673 | 2019-02-07 | Vertebrate Genomes Project | mammals | |||
| humpback whale | Megaptera novaeangliae | GCA_004329385.1_megNov1 | 2,265,788,366 | 2,558 | 9.14M (79) | 12.32K (52,140) | 9773 | 2019-03-06 | SAMN10585801 | PRJNA509641 | Arizona Cancer Evolution Center (ACE) | mammals | ||
| harbor seal | Phoca vitulina (2) | GCA_004348235.1_GSC_HSeal_1.0 | 2,363,587,482 | 5,542 | 41.02M (18) | 283.89K (2,463) | 9720 | 2019-02-11 | SAMN10150265 | PRJNA494181 | Canada's Genome Enterprise (CGEN) | mammals | ||
| view | harbor seal | Phoca vitulina (2) | GCF_004348235.1_GSC_HSeal_1.0 | 2,363,596,144 | 5,541 | 41.02M (18) | 283.89K (2,463) | 9720 | 2019-02-11 | SAMN10150265 | PRJNA494181 | Canada's Genome Enterprise (CGEN) | mammals | |
| view | Indus River dolphin | Platanista minor | GCA_004363435.1_PlaMin_v1_BIUU | 2,671,072,510 | 1,098,790 | 23.93K (31,965) | 20.88K (37,102) | 48752 | 2019-03-22 | SAMN07678149 | PRJNA399467 | Broad Institute | mammals | |
| view | North Pacific right whale | Eubalaena japonica | GCA_004363455.1_EubJap_v1_BIUU | 2,693,575,300 | 1,353,963 | 39.81K (18,050) | 34.87K (20,862) | EN | 302098 | 2019-03-22 | SAMN07678124 | PRJNA399464 | Broad Institute | mammals |
| view | Pacific pocket mouse | Perognathus longimembris pacificus (3) | GCA_004363475.1_PerLonPac_v1_BIUU | 2,601,695,796 | 2,409,818 | 24.71K (23,202) | 17.69K (34,664) | 214514 | 2019-03-22 | SAMN07678105 | PRJNA399459 | Broad Institute | mammals | |
| view | Pacific pocket mouse (PPM17 2022 San Diego Zoo) | Perognathus longimembris pacificus (3) | GCF_023159225.1_ASM2315922v1 | 2,212,099,196 | 6,180 | 72.68M (11) | n/a | n/a | n/a | mammals | ||||
| view | boutu | Inia geoffrensis | GCA_004363515.1_IniGeo_v1_BIUU | 2,596,281,358 | 1,213,610 | 26.71K (21,180) | 24.57K (23,854) | EN | 9725 | 2019-03-22 | SAMN07678125 | PRJNA399465 | Broad Institute | mammals |
| view | punctate agouti | Dasyprocta punctata | GCA_004363535.1_DasPun_v1_BIUU | 3,012,098,298 | 986,664 | 43.70K (17,174) | 38.65K (19,800) | 34846 | 2019-03-22 | SAMN07678076 | PRJNA399386 | Broad Institute | mammals | |
| view | Hispaniolan solenodon | Solenodon paradoxus | GCA_004363575.1_SolPar_v1_BIUU | 2,109,877,870 | 176,618 | 407.68K (1,301) | 236.85K (2,341) | 79805 | 2019-03-22 | SAMN07678062 | PRJNA399371 | Broad Institute | mammals | |
| view | pygmy sperm whale | Kogia breviceps | GCA_004363705.1_KogBre_v1_BIUU | 2,759,698,159 | 1,252,072 | 28.81K (25,050) | 26.20K (27,952) | 27615 | 2019-03-22 | SAMN07678126 | PRJNA399466 | Broad Institute | mammals | |
| franciscana | Pontoporia blainvillei (2) | GCA_004363935.1_PonBla_v1_BIUU | 1,685,099,017 | 1,885,058 | 2.54K (134,453) | 2.54K (135,108) | VU | 48723 | 2019-03-22 | SAMN07678127 | PRJNA399468 | Broad Institute | mammals | |
| franciscana | Pontoporia blainvillei (2) | GCA_011754075.1_ASM1175407v1 | 2,011,747,776 | 493,481 | 6.93K (85,936) | 5.89K (100,714) | VU | 48723 | 2020-03-25 | SAMN02649573 | PRJNA239019 | Universidade do Vale do Itajai (UNIVALI) | mammals | |
| view | Cuvier's beaked whale | Ziphius cavirostris | GCA_004364475.1_ZipCav_v1_BIUU | 3,150,417,206 | 3,758,276 | 3.61K (165,383) | 3.61K (168,657) | 9760 | 2019-03-22 | SAMN07678128 | PRJNA399469 | Broad Institute | mammals | |
| view | aardvark | Orycteropus afer | GCA_004365145.1_OryAfe_v1_BIUU | 4,687,958,587 | 2,675,444 | 22.96K (53,163) | 20.35K (60,639) | 9818 | 2019-03-22 | SAMN07678101 | PRJNA399461 | Broad Institute | mammals | |
| view | Lowland paca | Cuniculus paca | GCA_004365215.1_CunPac_v1_BIUU | 3,399,583,187 | 3,768,450 | 3.89K (159,388) | 3.89K (162,485) | 108852 | 2019-03-22 | SAMN07678075 | PRJNA399385 | Broad Institute | mammals | |
| view | large tree shrew | Tupaia tana | GCA_004365275.1_TupTan_v1_BIUU | 3,648,908,809 | 3,883,620 | 2.97K (217,216) | 2.97K (223,788) | 70687 | 2019-03-22 | SAMN07678117 | PRJNA399462 | Broad Institute | mammals | |
| white-footed mouse | Peromyscus leucopus (4) | GCA_004664715.2_UCI_PerLeu_2.1 | 2,475,164,510 | 1,856 | 114.27M (9) | 3.49M (198) | 10041 | 2020-10-02 | SAMN03488028 | PRJNA281425 | University of California Irvine | mammals | ||
| view | white-footed mouse | Peromyscus leucopus (4) | GCF_004664715.2_UCI_PerLeu_2.1 | 2,475,180,836 | 1,857 | 114.27M (9) | 3.49M (198) | 10041 | 2020-10-02 | SAMN03488028 | PRJNA281425 | University of California Irvine | mammals | |
| white-footed mouse | Peromyscus leucopus (4) | GCA_004664715.1_Pero_0.1 | 2,474,055,010 | 1,762 | 4.48M (162) | 4.10M (172) | 10041 | 2019-04-05 | University of California Irvine | mammals | ||||
| view | white-footed mouse | Peromyscus leucopus (4) | GCF_004664715.1_Pero_0.1 | 2,474,071,336 | 1,763 | 4.48M (162) | 4.10M (172) | 10041 | 2019-04-05 | University of California Irvine | mammals | |||
| Tree pangolin | Phataginus tricuspis | GCA_004765945.1_ManTri_v1_BIUU | 3,013,399,831 | 2,116,242 | 25.24K (28,315) | 23.75K (30,303) | EN | 358128 | 2019-04-09 | SAMN07678093 | PRJNA399460 | Broad Institute | mammals | |
| rodents | Grammomys surdaster (2) | GCA_004785775.1_NIH_TR_1.0 | 2,412,664,998 | 23,656 | 8.09M (85) | 51.73K (13,729) | 491861 | 2019-04-12 | SAMN11172698 | PRJNA526040 | NIH Sequencing Center | mammals | ||
| view | rodents | Grammomys surdaster (2) | GCF_004785775.1_NIH_TR_1.0 | 2,412,664,998 | 23,656 | 8.09M (85) | 51.73K (13,729) | 491861 | 2019-04-12 | SAMN11172698 | PRJNA526040 | NIH Sequencing Center | mammals | |
| Himalayan marmot | Marmota himalayana | GCA_005280165.1_ASM528016v1 | 2,471,704,417 | 4,363 | 1.50M (483) | 102.16K (6,711) | 93163 | 2019-05-10 | SAMN07661221 | PRJNA407692 | Xian Jiaotong University Health Science Center | mammals | ||
| Amur leopard cat | Prionailurus bengalensis euptilurus (2) | GCA_005406085.2_Prionailurus_bengalensis_euptilurus_v03 | 2,421,863,388 | 49,228 | 214.46K (3,344) | 20.43K (32,004) | 300877 | 2020-09-15 | SAMD00153258 | PRJDB7724 | Kyoto City Zoo | mammals | ||
| Amur leopard cat | Prionailurus bengalensis euptilurus (2) | GCA_005406085.1_Prionailurus_bengalensis_euptilurus_v01 | 2,435,348,619 | 65,356 | 152.60K (4,671) | 21.45K (30,581) | 300877 | 2019-04-18 | Kyoto City Zoo | mammals | ||||
| Vancouver Island marmot | Marmota vancouverensis | GCA_005458795.1_GSC_VIM_1.0 | 2,504,036,567 | 23,916 | 1.59M (457) | 11.50K (61,199) | CR | 93167 | 2019-05-16 | SAMN09425912 | PRJNA476112 | Canada's Genomic Enterprise | mammals | |
| domestic yak | Bos grunniens (2) | GCA_005887515.2_BosGru3.0 | 2,832,776,395 | 414 | 114.39M (11) | 44.72M (20) | 30521 | 2019-06-10 | SAMN11569574 | PRJNA540974 | Lanzhou University | mammals | ||
| domestic yak | Bos grunniens (2) | GCA_005887515.1_LU_Bosgru_v3.0 | 2,832,776,395 | 414 | 114.39M (11) | 44.72M (20) | 30521 | 2019-06-10 | Lanzhou University | mammals | ||||
| white-lipped deer | Cervus albirostris | GCA_006408465.1_WLD | 2,692,225,130 | 171,874 | 3.77M (218) | 39.63K (18,227) | VU | 1088058 | 2019-06-24 | SAMN08714477 | PRJNA438286 | Northwestern Polytechnical University | mammals | |
| black muntjac | Muntiacus crinifrons (3) | GCA_006408485.1_BMJ | 2,681,196,170 | 21,054 | 1.31M (570) | 8.27K (94,300) | VU | 71854 | 2019-06-24 | SAMN08714476 | PRJNA438286 | Northwestern Polytechnical University | mammals | |
| black muntjac | Muntiacus crinifrons (3) | GCA_020226055.1_ASM2022605v1 | 2,548,844,227 | 5,860 | 632.08M (2) | 3.94M (189) | VU | 71854 | 2021-10-05 | SAMN15339011 | PRJNA640966 | Northwestern Polytechnical University | mammals | |
| black muntjac | Muntiacus crinifrons (3) | GCA_020276665.1_ASM2027666v1 | 2,489,495,709 | 836 | 646.57M (2) | 25.23M (33) | VU | 71854 | 2021-10-05 | SAMN15339010 | PRJNA640966 | Northwestern Polytechnical University | mammals | |
| topi | Damaliscus lunatus | GCA_006408505.1_CTB | 3,127,764,384 | 92,109 | 1.17M (799) | 38.84K (22,103) | 9929 | 2019-06-24 | SAMN08714481 | PRJNA438286 | Northwestern Polytechnical University | mammals | ||
| Reeves' muntjac | Muntiacus reevesi (4) | GCA_006408525.1_CIJ | 2,601,888,952 | 200,261 | 1.22M (520) | 72.38K (10,341) | 9886 | 2019-06-24 | SAMN08714475 | PRJNA438286 | Northwestern Polytechnical University | mammals | ||
| Reeves' muntjac | Muntiacus reevesi (4) | GCA_008787405.2_UCB_Mree_1.1 | 2,579,575,442 | 29,705 | 94.10M (7) | 225.14K (3,207) | 9886 | 2019-10-07 | SAMN11611988 | PRJNA542137 | University of California, Berkeley | mammals | ||
| Reeves' muntjac | Muntiacus reevesi (4) | GCA_020226045.1_ASM2022604v1 | 2,494,014,298 | 460 | 113.32M (7) | 18.60M (38) | 9886 | 2021-10-05 | SAMN15339013 | PRJNA640966 | Northwestern Polytechnical University | mammals | ||
| Reeves' muntjac | Muntiacus reevesi (4) | GCA_008787405.1_UCB_Mree_1.0 | 2,579,575,442 | 29,705 | 94.10M (7) | 225.14K (3,207) | 9886 | 2019-10-07 | University of California, Berkeley | mammals | ||||
| hartebeest | Alcelaphus buselaphus | GCA_006408545.1_HBT | 3,882,338,275 | 539,659 | 12.03K (101,431) | 889 (351,971) | 59517 | 2019-06-24 | SAMN08714483 | PRJNA438286 | Northwestern Polytechnical University | mammals | ||
| giraffe | Giraffa camelopardalis | GCA_006408565.1_GFE | 2,473,180,627 | 78,945 | 3.15M (221) | 25.06K (29,026) | VU | 9894 | 2019-06-24 | SAMN08714473 | PRJNA438286 | Northwestern Polytechnical University | mammals | |
| springbok | Antidorcas marsupialis | GCA_006408585.1_SGB | 3,024,612,899 | 94,522 | 694.90K (1,300) | 42.75K (19,543) | 59523 | 2019-06-24 | SAMN08714490 | PRJNA438286 | Northwestern Polytechnical University | mammals | ||
| brindled gnu | Connochaetes taurinus | GCA_006408615.1_BWD | 2,644,042,816 | 78,350 | 366.22K (2,060) | 70.61K (10,786) | 9927 | 2019-06-24 | SAMN08714482 | PRJNA438286 | Northwestern Polytechnical University | mammals | ||
| Grant's gazelle | Nanger granti | GCA_006408635.1_GTG | 3,032,779,593 | 62,189 | 528.46K (1,844) | 7.45K (82,532) | 27591 | 2019-06-24 | SAMN08714487 | PRJNA438286 | Northwestern Polytechnical University | mammals | ||
| even-toed ungulates | Tragulus kanchil (2) | GCA_006408655.1_LMD | 3,053,423,192 | 185,856 | 243.50K (3,803) | 13.85K (41,592) | 1088131 | 2019-06-24 | SAMN08714472 | PRJNA438286 | Northwestern Polytechnical University | mammals | ||
| Kirk's dik-dik | Madoqua kirkii | GCA_006408675.1_KDD | 2,648,126,871 | 216,116 | 27.73K (26,803) | 27.72K (26,810) | 66434 | 2019-06-24 | SAMN08714488 | PRJNA438286 | Northwestern Polytechnical University | mammals | ||
| impala | Aepyceros melampus | GCA_006408695.1_IMP | 2,631,303,056 | 24,102 | 344.54K (2,451) | 82.46K (9,285) | 9897 | 2019-06-24 | SAMN08714480 | PRJNA438286 | Northwestern Polytechnical University | mammals | ||
| bush duiker | Sylvicapra grimmia | GCA_006408735.1_CMD | 3,145,094,493 | 22,324 | 583.33K (1,658) | 9.72K (76,069) | 119562 | 2019-06-24 | SAMN08714508 | PRJNA438286 | Northwestern Polytechnical University | mammals | ||
| Thomson's gazelle | Eudorcas thomsonii | GCA_006408755.1_TMG | 2,904,272,043 | 123,308 | 1.58M (484) | 137.48K (5,693) | 69308 | 2019-06-24 | SAMN08714486 | PRJNA438286 | Northwestern Polytechnical University | mammals | ||
| African buffalo | Syncerus caffer (4) | GCA_006408785.2_ASM640878v2 | 2,929,436,968 | 148,371 | 2.32M (382) | 52.32K (15,319) | 9970 | 2021-12-01 | SAMN08714496 | PRJNA438286 | Northwestern Polytechnical University | mammals | ||
| African buffalo | Syncerus caffer (4) | GCA_902500845.1_africanbuffalo | 2,652,966,730 | 3,265 | 69.16M (13) | 2.02M (401) | 9970 | 2019-11-26 | SAMEA5988689 | PRJEB34511 | ABER | mammals | ||
| African buffalo | Syncerus caffer (4) | GCA_902825105.1_synceruscaffer | 2,652,966,730 | 3,265 | 69.16M (13) | 2.02M (401) | 9970 | 2020-04-02 | SAMEA6520500 | PRJEB36586 | UNIVERSITY OF EDINBURGH | mammals | ||
| African buffalo | Syncerus caffer (4) | GCA_006408785.1_ABF | 2,929,427,825 | 148,371 | 2.32M (382) | 52.32K (15,319) | 9970 | 2019-06-24 | Northwestern Polytechnical University | mammals | ||||
| muntjak | Muntiacus muntjak (3) | GCA_006409035.1_CMJ | 2,703,710,594 | 383,561 | 1.26M (273) | 23.47K (33,169) | 9888 | 2019-06-24 | SAMN08714474 | PRJNA438286 | Northwestern Polytechnical University | mammals | ||
| muntjak | Muntiacus muntjak (3) | GCA_008782695.1_UCB_Mmun_1.0 | 2,573,529,099 | 25,651 | 682.45M (2) | 215.53K (3,442) | 9888 | 2019-10-07 | SAMN11611925 | PRJNA542135 | University of California, Berkeley | mammals | ||
| muntjak | Muntiacus muntjak (3) | GCA_008931205.1_ASM893120v1 | 2,657,603,429 | 170,618 | 1.35M (254) | 41.65K (18,554) | 9888 | 2019-10-09 | SAMN09604853 | PRJNA479821 | University of California Davis | mammals | ||
| bushbuck | Tragelaphus scriptus | GCA_006410495.1_BUB | 2,873,326,854 | 237,860 | 890.55K (879) | 28.35K (26,133) | 66440 | 2019-06-24 | SAMN08714495 | PRJNA438286 | Northwestern Polytechnical University | mammals | ||
| Przewalski's gazelle | Procapra przewalskii | GCA_006410515.1_PLG | 2,692,986,855 | 274,130 | 5.52M (133) | 10.40K (68,816) | EN | 157668 | 2019-06-24 | SAMN08714485 | PRJNA438286 | Northwestern Polytechnical University | mammals | |
| gerenuk | Litocranius walleri | GCA_006410535.1_GRK | 2,979,336,167 | 79,667 | 3.13M (282) | 62.35K (13,320) | 69311 | 2019-06-24 | SAMN08714484 | PRJNA438286 | Northwestern Polytechnical University | mammals | ||
| Alpine ibex | Capra ibex | GCA_006410555.1_IBX | 2,701,356,656 | 55,914 | 61.91M (16) | 380.98K (2,089) | 72542 | 2019-06-24 | SAMN08714504 | PRJNA438286 | Northwestern Polytechnical University | mammals | ||
| suni | Neotragus moschatus | GCA_006410615.1_SUN | 2,675,729,750 | 218,204 | 952.09K (662) | 59.28K (10,954) | 66442 | 2019-06-24 | SAMN08714493 | PRJNA438286 | Northwestern Polytechnical University | mammals | ||
| Harvey's duiker | Cephalophus harveyi | GCA_006410635.1_HVD | 2,816,643,069 | 85,160 | 365.47K (2,293) | 61.37K (12,817) | 129224 | 2019-06-24 | SAMN08714507 | PRJNA438286 | Northwestern Polytechnical University | mammals | ||
| waterbuck | Kobus ellipsiprymnus | GCA_006410655.1_DFW | 2,895,340,485 | 88,848 | 779.55K (1,111) | 26.17K (28,900) | 9962 | 2019-06-24 | SAMN08714511 | PRJNA438286 | Northwestern Polytechnical University | mammals | ||
| klipspringer | Oreotragus oreotragus | GCA_006410675.1_KSP | 3,247,632,364 | 24,892 | 339.39K (3,115) | 42.13K (20,129) | 66444 | 2019-06-24 | SAMN08714489 | PRJNA438286 | Northwestern Polytechnical University | mammals | ||
| Maxwell's duiker | Philantomba maxwellii | GCA_006410695.1_MXD | 3,145,938,691 | 25,633 | 383.90K (2,441) | 11.38K (58,824) | 907741 | 2019-06-24 | SAMN08714509 | PRJNA438286 | Northwestern Polytechnical University | mammals | ||
| view | sea otter | Enhydra lutris nereis | GCA_006410715.1_ASM641071v1/enhLutNer1 | 2,425,597,608 | 55,496 | 9.76M (68) | 23.47K (29,689) | EN | 1049777 | 2019-06-24 | SAMN09238016 | PRJNA472597 | UCLA | mammals |
| steenbok | Raphicerus campestris | GCA_006410735.1_SNB | 3,137,860,433 | 57,517 | 537.16K (1,462) | 25.05K (29,538) | 59544 | 2019-06-24 | SAMN08714491 | PRJNA438286 | Northwestern Polytechnical University | mammals | ||
| bongo | Tragelaphus eurycerus (2) | GCA_006410755.1_BNG | 2,962,040,965 | 1,539,703 | 12.57K (64,049) | 1.97K (350,234) | 69297 | 2019-06-24 | SAMN08714502 | PRJNA438286 | Northwestern Polytechnical University | mammals | ||
| lesser kudu | Tragelaphus imberbis | GCA_006410775.1_LEK | 4,038,235,010 | 272,415 | 1.78M (570) | 12.86K (62,445) | 9947 | 2019-06-24 | SAMN08714498 | PRJNA438286 | Northwestern Polytechnical University | mammals | ||
| greater kudu | Tragelaphus strepsiceros (2) | GCA_006410795.1_GTK | 2,867,754,166 | 320,432 | 511.48K (1,639) | 33.65K (23,621) | 9946 | 2019-06-24 | SAMN08714497 | PRJNA438286 | Northwestern Polytechnical University | mammals | ||
| royal antelope | Neotragus pygmaeus | GCA_006410875.1_RAL | 2,895,867,692 | 354,089 | 363.89K (1,428) | 30.75K (21,047) | 1027985 | 2019-06-24 | SAMN08714492 | PRJNA438286 | Northwestern Polytechnical University | mammals | ||
| Bohar reedbuck | Redunca redunca | GCA_006410935.1_BHR | 2,724,978,760 | 534,502 | 423.41K (1,625) | 39.28K (17,725) | 59556 | 2019-06-24 | SAMN08714512 | PRJNA438286 | Northwestern Polytechnical University | mammals | ||
| Sitatunga | Tragelaphus spekii | GCA_006411015.1_STG | 3,725,951,127 | 1,769,205 | 46.43K (8,914) | 9.48K (80,079) | 69298 | 2019-06-24 | SAMN08714499 | PRJNA438286 | Northwestern Polytechnical University | mammals | ||
| mountain nyala | Tragelaphus buxtoni | GCA_006411685.1_MTN | 3,267,488,234 | 2,910,462 | 7.37K (105,045) | 1.29K (535,926) | EN | 69296 | 2019-06-24 | SAMN08714501 | PRJNA438286 | Northwestern Polytechnical University | mammals | |
| eland | Tragelaphus oryx | GCA_006416875.1_CME | 2,837,493,372 | 4,043,025 | 1.26K (576,459) | 1.26K (576,459) | 9945 | 2019-06-24 | SAMN08714500 | PRJNA438286 | Northwestern Polytechnical University | mammals | ||
| oribi | Ourebia ourebi | GCA_006417275.1_ORB | 2,524,866,914 | 3,508,661 | 1.26K (541,478) | 1.26K (541,478) | 59536 | 2019-06-24 | SAMN08714494 | PRJNA438286 | Northwestern Polytechnical University | mammals | ||
| Chinese forest musk deer | Moschus berezovskii (3) | GCA_006459085.1_FMD | 2,818,010,997 | 77,520 | 2.51M (326) | 57.71K (13,666) | EN | 68408 | 2019-06-25 | SAMN10822789 | PRJNA438286 | Northwestern Polytechnical University | mammals | |
| Chinese forest musk deer | Moschus berezovskii (3) | GCA_006461545.1_NPU_MBRE_1.0 | 3,835,628,252 | 125,813 | 213.46K (4,608) | 24.70K (35,615) | EN | 68408 | 2019-06-25 | SAMN08714479 | PRJNA438286 | Northwestern Polytechnical University | mammals | |
| Chinese water deer | Hydropotes inermis (2) | GCA_006459105.1_NPU_HINE_1.0 | 2,530,176,423 | 22,246 | 13.82M (55) | 131.45K (5,612) | VU | 9883 | 2019-06-25 | SAMN10176374 | PRJNA438286 | Northwestern Polytechnical University | mammals | |
| Chinese water deer | Hydropotes inermis (2) | GCA_020226075.1_ASM2022607v1 | 2,540,444,434 | 1,712 | 74.97M (14) | 131.41K (5,613) | VU | 9883 | 2021-10-05 | SAMN15339014 | PRJNA640966 | Northwestern Polytechnical University | mammals | |
| alpine musk deer | Moschus chrysogaster | GCA_006461725.1_NPU_MCHR_1.0 | 4,972,482,505 | 127,198 | 100.43K (11,680) | 3.77K (160,977) | EN | 68412 | 2019-06-25 | SAMN08714478 | PRJNA438286 | Northwestern Polytechnical University | mammals | |
| pig | Sus scrofa scrofa (2) | GCA_006511355.2_NSME_pig_1.2 | 2,479,330,878 | 21 | 142.37M (7) | 595.00K (1,051) | 415978 | 2021-04-09 | SAMN08035066 | PRJNA418771 | University of Messina | mammals | ||
| pig | Sus scrofa scrofa (2) | GCA_006511355.1_NSME_pig_1 | 2,502,318,605 | 613 | 139.00M (8) | 52.15M (15) | 415978 | 2019-07-03 | University of Messina | mammals | ||||
| North American porcupine | Erethizon dorsatum | GCA_006547115.1_GSC_porc_1.0 | 2,436,547,097 | 15,915 | 16.68M (42) | 118.74K (6,007) | 34844 | 2019-07-01 | SAMN10984256 | PRJNA523436 | Canada's Genomic Enterprise | mammals | ||
| long-finned pilot whale | Globicephala melas (2) | GCA_006547405.1_ASM654740v1 | 2,333,871,032 | 6,637 | 18.10M (42) | 332.80K (2,096) | 9731 | 2019-07-01 | SAMN11083132 | PRJNA525909 | Canada's Genomic Enterprise | mammals | ||
| view | long-finned pilot whale | Globicephala melas (2) | GCF_006547405.1_ASM654740v1 | 2,333,870,982 | 6,637 | 18.10M (42) | 332.80K (2,096) | 9731 | 2019-07-01 | SAMN11083132 | PRJNA525909 | Canada's Genomic Enterprise | mammals | |
| sable antelope | Hippotragus niger niger | GCA_006942125.1_SCBI_HNig_1.0 | 2,595,326,149 | 15,557 | 4.59M (168) | 45.50K (16,800) | 82127 | 2019-07-12 | SAMN07620900 | PRJNA403773 | Saint-Petersburg State University | mammals | ||
| root vole | Microtus oeconomus | GCA_007455595.1_ASM745559v1 | 2,306,554,743 | 562,436 | 114.77K (5,556) | 51.22K (13,221) | 64717 | 2019-07-25 | SAMN12142104 | PRJNA551187 | Groningen Institute for Evolutionary Life Sciences | mammals | ||
| Common vole | Microtus arvalis | GCA_007455615.1_ASM745561v1 | 2,620,579,938 | 1,081,432 | 52.88K (11,870) | 34.80K (19,923) | 47230 | 2019-07-25 | SAMN12142102 | PRJNA551185 | Groningen Institute for Evolutionary Life Sciences | mammals | ||
| view | Canada lynx | Lynx canadensis (6) | GCA_007474575.1_mLynCan4_v1.alt | 1,415,234,291 | 15,033 | 130.15K (3,063) | 130.12K (3,064) | 61383 | 2019-07-25 | Vertebrate Genomes Project | mammals | |||
| Canada lynx | Lynx canadensis (6) | GCA_007474575.2_mLynCan4.alt.v2 | 1,416,309,019 | 15,041 | 130.16K (3,065) | 130.15K (3,065) | 61383 | 2020-06-12 | SAMN09948483 | PRJNA489108 | Vertebrate Genomes Project | mammals | ||
| Canada lynx | Lynx canadensis (6) | GCA_007474595.2_mLynCan4.pri.v2 | 2,407,827,299 | 55 | 147.28M (7) | 7.50M (94) | 61383 | 2020-07-14 | SAMN09948483 | PRJNA489107 | Vertebrate Genomes Project | mammals | ||
| view | Canada lynx | Lynx canadensis (6) | GCF_007474595.2_mLynCan4.pri.v2 | 2,407,810,255 | 54 | 147.28M (7) | 7.50M (94) | 61383 | 2020-07-14 | SAMN09948483 | PRJNA489107 | Vertebrate Genomes Project | mammals | |
| Canada lynx | Lynx canadensis (6) | GCA_007474595.1_mLynCan4_v1.p | 2,408,900,816 | 67 | 146.11M (7) | 7.50M (94) | 61383 | 2019-07-26 | Vertebrate Genomes Project | mammals | ||||
| view | Canada lynx | Lynx canadensis (6) | GCF_007474595.1_mLynCan4_v1.p | 2,408,883,772 | 66 | 146.11M (7) | 7.50M (94) | 61383 | 2019-07-26 | Vertebrate Genomes Project | mammals | |||
| Eurasian elk | Alces alces (2) | GCA_007570765.1_GSC_moose_1.0 | 2,743,737,413 | 48,219 | 4.13M (183) | 45.09K (16,420) | 9852 | 2019-07-12 | SAMN11091360 | PRJNA526240 | Canada's Genomic Enterprise | mammals | ||
| Eurasian elk | Alces alces (2) | GCA_015832495.1_NRM_Aalces_1_0.fsa | 2,486,551,692 | 8,371 | 1.70M (443) | 70.00K (9,830) | 9852 | 2020-12-08 | SAMN16402102 | PRJNA668262 | Swedish Museum of Natural History | mammals | ||
| Tasmanian wolf | Thylacinus cynocephalus (3) | GCA_007646695.1_UniMelb_Thylacine_Refassem_1 | 3,095,956,865 | 19,549 | 1.92M (499) | 461 (815,151) | 9275 | 2019-07-30 | SAMN06049672 | PRJNA354646 | The University of Melbourne | mammals | ||
| California mouse | Peromyscus californicus insignis (3) | GCA_007827085.1_PCal_1.0 | 2,401,349,449 | 34,400 | 97.44M (9) | 32.48K (21,601) | 564181 | 2019-08-02 | University of Maryland | mammals | ||||
| California mouse | Peromyscus californicus insignis (3) | GCA_007827085.2_ASM782708v2 | 2,561,163,842 | 34,124 | 113.66M (9) | 32.64K (22,972) | 564181 | 2020-03-25 | SAMN10698868 | PRJNA513219 | University of Maryland | mammals | ||
| gayal | Bos frontalis (2) | GCA_007844835.1_NRC_Mithun_1 | 3,002,445,034 | 5,015 | 1.00M (900) | 28.71K (29,339) | 30520 | 2019-08-05 | SAMN02689702 | PRJNA241403 | NRC on Mithun ICAR | mammals | ||
| gayal | Bos frontalis (2) | GCA_017311355.1_CVASU_Gayal_001 | 2,795,315,450 | 1,262,134 | 9.65K (76,337) | 30520 | 2021-03-09 | SAMN16965583 | PRJNA655910 | Bangladesh Livestock Research Institute; Chittagong Veterinary and Animal Sciences University | mammals | |||
| springhare | Pedetes capensis | GCA_007922755.1_PedCap_v1_BIUU | 2,850,076,812 | 673,563 | 74.43K (9,923) | 54.01K (14,356) | 10023 | 2019-08-08 | SAMN07678104 | PRJNA399412 | Broad Institute | mammals | ||
| pallid bat | Antrozous pallidus | GCA_007922775.1_AntPal_v1_BIUU | 2,597,469,403 | 902,551 | 13.96K (40,776) | 13.44K (42,767) | 9440 | 2019-08-08 | SAMN07678034 | PRJNA399351 | Broad Institute | mammals | ||
| evening bat | Nycticeius humeralis | GCA_007922795.1_NycHum_v1_BIUU | 2,779,565,143 | 1,676,240 | 15.10K (40,515) | 14.27K (43,612) | 27670 | 2019-08-08 | SAMN07678030 | PRJNA399355 | Broad Institute | mammals | ||
| California big-eared bat | Macrotus californicus | GCA_007922815.1_MacCal_v1_BIUU | 2,161,582,626 | 1,128,787 | 16.93K (21,311) | 16.39K (22,835) | 9419 | 2019-08-08 | SAMN07678130 | PRJNA399440 | Broad Institute | mammals | ||
| gray wolf | Canis lupus (3) | GCA_007922845.1_UniMelb_Wolf_Refassem_1 | 2,342,421,267 | 765 | 64.18M (14) | 842 (451,482) | 9612 | 2019-08-08 | SAMN03366711 | PRJNA541172 | The University of Melbourne | mammals | ||
| gray wolf | Canis lupus (3) | GCA_905319845.1_mCanLor1.1_alternate_haplotype | 1,446,594,657 | 5,536 | 719.35K (583) | 719.35K (583) | 9612 | 2021-03-21 | SAMEA7532739 | PRJEB43199 | WELLCOME SANGER INSTITUTE | mammals | ||
| gray wolf | Canis lupus (3) | GCA_905319855.2_mCanLor1.2 | 2,447,463,909 | 82 | 65.78M (15) | 34.38M (25) | 9612 | 2021-03-26 | SAMEA7532739 | PRJEB43200 | WELLCOME SANGER INSTITUTE | mammals | ||
| southern multimammate mouse | Mastomys coucha (2) | GCA_008632895.1_UCSF_Mcou_1 | 2,507,168,619 | 27 | 118.62M (8) | 30.48K (22,478) | 35658 | 2019-09-24 | SAMN07635206 | PRJNA406979 | University of California, San Francisco | mammals | ||
| view | southern multimammate mouse | Mastomys coucha (2) | GCF_008632895.1_UCSF_Mcou_1 | 2,507,184,835 | 28 | 118.62M (8) | 30.48K (22,478) | 35658 | 2019-09-24 | SAMN07635206 | PRJNA406979 | University of California, San Francisco | mammals | |
| view | Blue whale | Balaenoptera musculus (6) | GCA_008658375.1_mBalMus1_alternate | 1,876,085,767 | 12,574 | 270.33K (2,122) | EN | 9771 | 2019-09-23 | G10K | mammals | |||
| Blue whale | Balaenoptera musculus (6) | GCA_008658375.2_mBalMus1.alt.v2 | 1,835,388,607 | 10,996 | 275.58K (2,048) | 275.58K (2,048) | EN | 9771 | 2020-09-30 | SAMN12287136 | PRJNA554523 | G10K | mammals | |
| Blue whale | Balaenoptera musculus (6) | GCA_009873245.3_mBalMus1.pri.v3 | 2,374,868,944 | 106 | 110.31M (9) | 6.32M (103) | EN | 9771 | 2020-10-02 | SAMN12287136 | PRJNA554522 | G10K | mammals | |
| view | Blue whale | Balaenoptera musculus (6) | GCF_009873245.2_mBalMus1.pri.v3 | 2,374,868,943 | 106 | 110.31M (9) | 6.32M (103) | EN | 9771 | 2020-10-02 | SAMN12287136 | PRJNA554522 | G10K | mammals |
| Blue whale | Balaenoptera musculus (6) | GCA_009873245.1_mBalMus1_primary | 2,380,012,584 | 129 | 110.47M (9) | 5.96M (110) | EN | 9771 | 2020-01-14 | G10K | mammals | |||
| view | Blue whale | Balaenoptera musculus (6) | GCA_009873245.2_mBalMus1.v2 | 2,380,012,384 | 130 | 110.47M (9) | 5.96M (110) | EN | 9771 | 2020-02-03 | G10K | mammals | ||
| vaquita | Phocoena sinus (3) | GCA_008692025.1_mPhoSin1.pri | 2,371,540,524 | 65 | 115.47M (8) | 20.22M (39) | CR | 42100 | 2019-09-26 | SAMN12325353 | PRJNA557831 | Vertebrate Genomes Project | mammals | |
| view | vaquita | Phocoena sinus (3) | GCA_008692045.1_mPhoSin1.alt | 995,426,950 | 9,469 | 137.87K (2,148) | 137.87K (2,148) | CR | 42100 | 2019-09-24 | SAMN12325353 | PRJNA557832 | Vertebrate Genomes Project | mammals |
| view | vaquita | Phocoena sinus (3) | GCF_008692025.1_mPhoSin1.pri | 2,371,524,154 | 64 | 115.47M (8) | 20.22M (39) | CR | 42100 | 2019-09-26 | SAMN12325353 | PRJNA557831 | Vertebrate Genomes Project | mammals |
| spotted hyena | Crocuta crocuta | GCA_008692635.1_BGI_CrCroc_1.0 | 2,348,377,234 | 24,679 | 7.24M (105) | 97.87K (6,667) | 9678 | 2019-10-07 | SAMN12283067 | PRJNA554753 | BGI | mammals | ||
| lion | Panthera leo (4) | GCA_008795835.1_PanLeo1.0 | 2,406,807,619 | 8,060 | 136.05M (8) | 286.70K (2,481) | VU | 9689 | 2019-10-07 | SAMN12375718 | PRJNA556895 | Stanford University | mammals | |
| lion | Panthera leo (4) | GCA_012313985.1_BGI_AfriLion_1.1 | 2,353,845,564 | 240,216 | 23.05K (29,663) | VU | 9689 | 2020-04-15 | SAMN14446495 | PRJNA615082 | BGI | mammals | ||
| lion | Panthera leo (4) | GCA_018350215.1_P.leo_Ple1_pat1.1 | 2,297,552,363 | 53 | 147.40M (7) | 77.78M (11) | VU | 9689 | 2021-05-13 | SAMN17054329 | PRJNA684340 | Texas A&M University | mammals | |
| view | lion | Panthera leo (4) | GCF_018350215.1_P.leo_Ple1_pat1.1 | 2,297,568,983 | 54 | 147.40M (7) | 77.78M (11) | VU | 9689 | 2021-05-13 | SAMN17054329 | PRJNA684340 | Texas A&M University | mammals |
| Fin whale | Balaenoptera physalus (2) | GCA_008795845.1_Baphy | 2,462,774,868 | 62,302 | 871.02K (803) | 4.49K (129,632) | VU | 9770 | 2019-10-01 | SAMN02192672 | PRJNA72723 | Korea Ocean Research & Development Institute | mammals | |
| dzo | Bos grunniens x Bos taurus (2) | GCA_009493645.1_ARS_UNL_BGru_maternal_1.0_p | 2,677,172,352 | 485 | 104.38M (11) | 72.34M (13) | 331036 | 2019-11-04 | SAMN12153487 | PRJNA551500 | University of Nebraska - Lincoln | mammals | ||
| dzo | Bos grunniens x Bos taurus (2) | GCA_009493655.1_ARS_UNL_Btau-highland_paternal_1.0_alt | 2,668,877,089 | 342 | 104.39M (11) | 71.68M (14) | 331036 | 2019-11-04 | SAMN12153487 | PRJNA552915 | University of Nebraska - Lincoln | mammals | ||
| Asiatic black bear | Ursus thibetanus thibetanus | GCA_009660055.1_ASM966005v1 | 2,373,600,990 | 24,973 | 26.80M (27) | 145.97K (4,841) | VU | 441215 | 2019-11-13 | SAMN12818422 | PRJNA573607 | Northwestern Polytechnical University | mammals | |
| mountain goat | Oreamnos americanus | GCA_009758055.1_ASM975805v1 | 2,506,012,843 | 3,212 | 66.62M (13) | 24.51K (28,926) | 34873 | 2019-12-16 | SAMN10593834 | PRJNA510081 | Trent University | mammals | ||
| Mountain hare | Lepus timidus | GCA_009760805.1_CIBIO-ISEM_LeTim_1.1 | 2,703,257,108 | 4,205 | 116.27M (9) | 18.46K (32,945) | 62621 | 2019-12-17 | SAMN12621015 | PRJNA561582 | CIBIO | mammals | ||
| lesser short-nosed fruit bat | Cynopterus brachyotis | GCA_009793145.1_ASM979314v1 | 1,758,935,687 | 48,006 | 251.28K (1,873) | 16.63K (29,118) | 58060 | 2019-12-23 | SAMN10857275 | PRJNA518751 | National University of Singapore | mammals | ||
| ermine | Mustela erminea (3) | GCA_009829155.1_mMusErm1.Pri | 2,445,217,281 | 94 | 130.15M (8) | 36.33M (19) | 36723 | 2020-01-03 | SAMN12611999 | PRJNA561931 | Vertebrate Genomes Project | mammals | ||
| view | ermine | Mustela erminea (3) | GCA_009829165.1_mMusErm1.alt | 1,640,216,494 | 3,327 | 1.00M (504) | 36723 | 2020-01-03 | SAMN12611999 | PRJNA561930 | Vertebrate Genomes Project | mammals | ||
| view | ermine | Mustela erminea (3) | GCF_009829155.1_mMusErm1.Pri | 2,445,217,270 | 94 | 130.15M (8) | 36.33M (19) | 36723 | 2020-01-03 | SAMN12611999 | PRJNA561931 | Vertebrate Genomes Project | mammals | |
| Northern American river otter | Lontra canadensis (2) | GCA_010015895.1_GSC_riverotter_1.0 | 2,405,748,306 | 7,023 | 18.46M (39) | 691.97K (1,029) | 76717 | 2020-01-27 | SAMN13049247 | PRJNA578111 | Canada's Genomic Enterprise | mammals | ||
| view | Northern American river otter | Lontra canadensis (2) | GCF_010015895.1_GSC_riverotter_1.0 | 2,405,748,306 | 7,023 | 18.46M (39) | 691.97K (1,029) | 76717 | 2020-01-27 | SAMN13049247 | PRJNA578111 | Canada's Genomic Enterprise | mammals | |
| great gerbil | Rhombomys opimus | GCA_010120015.1_ASM1012001v1 | 2,376,008,858 | 6,389 | 3.61M (189) | 56.88K (10,621) | 186474 | 2020-02-04 | SAMN10089360 | PRJNA491814 | University of Oslo | mammals | ||
| Yarkand deer | Cervus hanglu yarkandensis | GCA_010411085.1_CEY_v1 | 2,594,114,534 | 17,927 | 77.69M (13) | 268.66K (2,752) | 84702 | 2020-02-12 | SAMN12710658 | PRJNA564362 | Institute of Special Wild Economic Animals and Plants, Chinese Academy of Agricultural Sciences | mammals | ||
| black rat | Rattus rattus (3) | GCA_011064425.1_Rrattus_CSIRO_v1 | 2,382,770,976 | 2,172 | 158.82M (6) | 1.64M (371) | 10117 | 2020-03-04 | SAMN12855339 | PRJNA574245 | CSIRO | mammals | ||
| black rat | Rattus rattus (3) | GCA_011800105.1_ASM1180010v1 | 2,250,262,423 | 6,805 | 145.85M (6) | 31.54K (19,634) | 10117 | 2020-04-01 | SAMN14087596 | PRJNA607436 | Max Planck Institute for the Science of Human History | mammals | ||
| view | black rat | Rattus rattus (3) | GCF_011064425.1_Rrattus_CSIRO_v1 | 2,382,787,281 | 2,173 | 158.82M (6) | 1.64M (371) | 10117 | 2020-03-04 | SAMN12855339 | PRJNA574245 | CSIRO | mammals | |
| view | common brushtail | Trichosurus vulpecula (3) | GCA_011100635.1_mTriVul1.pri | 3,359,347,793 | 212 | 442.56M (4) | 4.31M (218) | 9337 | 2020-03-10 | SAMN12629507 | PRJNA562014 | Vertebrate Genomes Project | mammals | |
| view | common brushtail | Trichosurus vulpecula (3) | GCA_011100645.1_mTriVul1.alt | 2,591,928,569 | 12,133 | 551.02K (1,310) | 551.02K (1,310) | 9337 | 2020-03-09 | SAMN12629507 | PRJNA562013 | Vertebrate Genomes Project | mammals | |
| view | common brushtail | Trichosurus vulpecula (3) | GCF_011100635.1_mTriVul1.pri | 3,359,347,707 | 212 | 442.56M (4) | 4.31M (218) | 9337 | 2020-03-10 | SAMN12629507 | PRJNA562014 | Vertebrate Genomes Project | mammals | |
| Gunnison's prairie dog | Cynomys gunnisoni | GCA_011316645.1_ASM1131664v1 | 2,674,371,627 | 12,628 | 824.61K (911) | 687.76K (1,095) | 45479 | 2020-03-16 | SAMN12831216 | PRJNA573923 | Smithsonian Herndon Data Center | mammals | ||
| Leadbeater's possum | Gymnobelideus leadbeateri | GCA_011680675.1_LBP_v1 | 3,469,281,398 | 12,502 | 502.50K (2,092) | 500.78K (2,098) | CR | 38618 | 2020-03-23 | SAMN13475009 | PRJNA593327 | Deakin University | mammals | |
| view | African grass rat | Arvicanthis niloticus (4) | GCA_011750645.1_mArvNil1.mat | 2,486,141,644 | 1,610 | 80.18M (11) | 8.92M (75) | 61156 | 2020-03-25 | SAMN12611849 | PRJNA561936 | Vertebrate Genomes Project | mammals | |
| view | African grass rat | Arvicanthis niloticus (4) | GCA_011762505.1_mArvNil1.pat.X | 2,496,777,707 | 1,596 | 82.69M (11) | 11.14M (56) | 61156 | 2020-03-27 | SAMN12611849 | PRJNA608735 | Vertebrate Genomes Project | mammals | |
| view | African grass rat | Arvicanthis niloticus (4) | GCA_011762545.1_mArvNil1.pat | 2,517,706,780 | 1,740 | 79.93M (10) | 11.14M (56) | 61156 | 2020-03-25 | SAMN12611849 | PRJNA561935 | Vertebrate Genomes Project | mammals | |
| view | African grass rat | Arvicanthis niloticus (4) | GCF_011762505.1_mArvNil1.pat.X | 2,496,761,438 | 1,595 | 82.69M (11) | 11.14M (56) | 61156 | 2020-03-27 | SAMN12611849 | PRJNA608735 | Vertebrate Genomes Project | mammals | |
| hoary bat | Aeorestes cinereus (2) | GCA_011751065.1_L.cinereus_Cryan_1219_p1.0 | 2,149,060,452 | 2,536 | 35.08M (19) | 120.64K (5,188) | 257879 | 2020-03-25 | SAMN13850695 | PRJNA601154 | United States Geological Survey | mammals | ||
| hoary bat | Aeorestes cinereus (2) | GCA_011751095.1_L.cinereus_Cryan_1219_p1.0 | 2,118,430,019 | 2,537 | 34.12M (19) | 120.60K (5,140) | 257879 | 2020-03-25 | SAMN13850695 | PRJNA604040 | United States Geological Survey | mammals | ||
| Southern elephant seal | Mirounga leonina (2) | GCA_011800145.1_KU_Mleo_1.0 | 2,417,303,335 | 1,114 | 54.23M (16) | 197.95K (3,623) | 9715 | 2020-03-31 | SAMN13282320 | PRJNA587380 | Earth Biogenome Project | mammals | ||
| view | Southern elephant seal | Mirounga leonina (2) | GCF_011800145.1_KU_Mleo_1.0 | 2,417,320,305 | 1,115 | 54.23M (16) | 197.91K (3,624) | 9715 | 2020-03-31 | SAMN13282320 | PRJNA587380 | Earth Biogenome Project | mammals | |
| gray seal | Halichoerus grypus (2) | GCA_012393455.1_Tufts_HGry_1.1 | 2,338,260,283 | 6,881 | 1.03M (637) | 1.01M (652) | 9711 | 2020-04-15 | SAMN13022322 | PRJNA577240 | Cummings School of Veterinary Medicine at Tufts University | mammals | ||
| view | gray seal | Halichoerus grypus (2) | GCF_012393455.1_Tufts_HGry_1.1 | 2,338,243,510 | 6,880 | 1.03M (637) | 1.01M (652) | 9711 | 2020-04-15 | SAMN13022322 | PRJNA577240 | Cummings School of Veterinary Medicine at Tufts University | mammals | |
| sable | Martes zibellina | GCA_012583365.1_ASM1258336v1 | 2,420,676,913 | 15,810 | 5.20M (134) | 62.20K (9,825) | 36722 | 2020-04-20 | SAMN10226813 | PRJNA495455 | Novogene | mammals | ||
| Eastern roe deer | Capreolus pygargus | GCA_012922965.1_ASM1292296v1 | 2,607,832,873 | 92,048 | 6.07M (126) | 80.31K (9,379) | 48560 | 2020-04-28 | SAMN11098812 | PRJNA526434 | Northwestern Polytechnical University | mammals | ||
| llama | Lama glama chaku | GCA_013239585.1_ASM1323958v1 | 2,035,800,238 | 56,962 | 3.27M (182) | 111.52K (5,429) | 273914 | 2020-06-02 | SAMN08141935 | PRJNA421373 | Shanxi Agricultural University | mammals | ||
| guanaco | Lama guanicoe cacsilensis | GCA_013239625.1_ASM1323962v1 | 2,050,533,365 | 55,231 | 14.79M (43) | 343.81K (1,710) | 273908 | 2020-06-02 | SAMN08242136 | PRJNA427644 | Shanxi Agricultural University | mammals | ||
| vicugna | Vicugna vicugna mensalis | GCA_013265495.1_ASM1326549v1 | 2,026,803,740 | 12,405 | 6.16M (93) | 340.84K (1,725) | 273917 | 2020-06-02 | SAMN08274813 | PRJNA427832 | Shanxi Agricultural University | mammals | ||
| rabbit | Oryctolagus cuniculus cuniculus | GCA_013371645.1_OryCun3.0 | 2,780,373,160 | 1,091 | 140.39M (8) | 1.88M (418) | EN | 568996 | 2020-06-24 | SAMN15208106 | PRJNA635554 | Uppsala University | mammals | |
| Steller's sea cow | Hydrodamalis gigas | GCA_013391785.1_H_Gigas_1.0 | 1,239,941,981 | 998,083 | 1.43K (264,972) | 1.34K (281,195) | 63631 | 2020-07-08 | SAMN15314634 | PRJNA484555 | National Research Center Kurchatov Institute | mammals | ||
| black rhinoceros | Diceros bicornis minor (3) | GCA_013634535.1_ASM1363453v1 | 2,331,669,150 | 4,262 | 28.52M (23) | 6.04K (103,580) | CR | 77932 | 2020-07-24 | SAMN14912225 | PRJNA632573 | University of Venda | mammals | |
| black rhinoceros | Diceros bicornis minor (3) | GCA_020826835.1_mDicBic1.pat.decon | 3,044,793,931 | 1,199 | 59.08M (19) | 27.23M (33) | CR | 77932 | 2021-11-10 | SAMN22047685 | PRJNA773943 | Vertebrate Genomes Project | mammals | |
| Kuhl's pipistrelle | Pipistrellus kuhlii (2) | GCA_014108245.1_mPipKuh1.p | 1,775,705,730 | 203 | 80.24M (7) | 10.59M (43) | 59472 | 2020-08-07 | SAMN14734388 | PRJNA628567 | Bat1K | mammals | ||
| view | Kuhl's pipistrelle | Pipistrellus kuhlii (2) | GCF_014108245.1_mPipKuh1.p | 1,775,688,541 | 202 | 80.24M (7) | 10.59M (43) | 59472 | 2020-08-07 | SAMN14734388 | PRJNA628567 | Bat1K | mammals | |
| Pallas's mastiff bat | Molossus molossus (2) | GCA_014108415.1_mMolMol1.p | 2,315,585,093 | 61 | 110.67M (9) | 22.17M (30) | 27622 | 2020-08-07 | SAMN14734448 | PRJNA628574 | Bat1K | mammals | ||
| view | Pallas's mastiff bat | Molossus molossus (2) | GCF_014108415.1_mMolMol1.p | 2,315,568,481 | 60 | 110.67M (9) | 22.17M (30) | 27622 | 2020-08-07 | SAMN14734448 | PRJNA628574 | Bat1K | mammals | |
| gaur | Bos gaurus (2) | GCA_014182915.2_ARS_UOA_Gaur_1.1 | 2,717,349,581 | 635 | 104.47M (11) | 13.34M (61) | VU | 9904 | 2020-08-14 | SAMN05558794 | PRJNA325061 | USDA, ARS, USMARC | mammals | |
| gaur | Bos gaurus (2) | GCA_014182915.1_ARS_UOA_Gaur_1 | 2,717,349,581 | 635 | 104.47M (11) | 13.34M (61) | VU | 9904 | 2020-08-14 | USDA, ARS, USMARC | mammals | |||
| Sumatran rhinoceros | Dicerorhinus sumatrensis harrissoni | GCA_014189135.1_NRM_Dsumatrensis_v1.fasta | 2,442,452,479 | 1,781 | 54.48M (16) | 70.89K (9,606) | CR | 310711 | 2020-08-14 | SAMN15164313 | PRJNA638009 | Swedish Museum of Natural History | mammals | |
| Asiatic elephant | Elephas maximus | GCA_014332765.1_ASM1433276v1 | 3,128,770,357 | 6,948 | 2.77M (336) | 76.23K (11,304) | EN | 9783 | 2020-08-28 | SAMN14648705 | PRJNA622303 | University of Utah | mammals | |
| Bonin flying fox | Pteropus pselaphon | GCA_014363405.1_P_pselaphon_scaffold_01 | 1,933,220,355 | 7,513 | 770.41K (723) | 394.96K (1,364) | EN | 1496133 | 2020-08-23 | SAMD00237435 | PRJDB10275 | Environmental Genomics Office, Center for Enviromental Biology and Ecosystem Studies, National Institute for Environmental Studies | mammals | |
| Japanese black bear | Ursus thibetanus japonicus | GCA_014364545.1_U_thibetanus_scaffold_01 | 2,211,141,772 | 35,282 | 117.20K (5,438) | 39.75K (16,003) | VU | 378754 | 2020-08-23 | SAMD00233067 | PRJDB10066 | Environmental Genomics Office, Center for Environmental Biology and Ecosystem Studies, National Institute for Environmental Studies | mammals | |
| Asiatic mouflon | Ovis orientalis | GCA_014523465.1_CAU_Oori_1.0 | 2,652,567,896 | 128 | 103.69M (8) | 42.16M (23) | 469796 | 2020-09-11 | SAMN15835291 | PRJNA529571 | INSTITUTE OF ZOOLOGY, CHINESE ACADEMY OF SCIENCES | mammals | ||
| woodchuck | Marmota monax (4) | GCA_014533835.1_Woodchuck_1.0 | 2,736,982,772 | 8,860 | 1.09M (644) | 9995 | 2020-09-15 | SAMN13176033 | PRJNA587092 | Johns Hopkins University | mammals | |||
| view | woodchuck | Marmota monax (4) | GCA_901343595.1_MONAX5 | 2,626,060,708 | 48,534 | 892.19K (804) | 189.55K (3,885) | 9995 | 2019-09-13 | SAMEA91498168 | PRJEB19462 | CNAG | mammals | |
| view | woodchuck (LI92 2021) | Marmota monax (4) | GCF_021218885.1_Marmota_monax_Labrador192_V1.0 | 2,638,778,829 | 3,335 | 11.52M (60) | 9995 | 2021-12-15 | SAMN21332666 | PRJNA761405 | Hospital for Sick Children | mammals | ||
| white-tailed deer | Odocoileus virginianus | GCA_014726795.1_Odo_v1 | 2,520,982,601 | 2,905 | 17.10M (42) | 6.00M (127) | 9874 | 2020-09-24 | SAMN08105892 | PRJNA420098 | New England Biolabs | mammals | ||
| scimitar-horned oryx | Oryx dammah (3) | GCA_014754425.2_SCBI_Odam_1.1 | 2,707,165,964 | 9,088 | 100.40M (11) | 374.34K (2,073) | 59534 | 2020-09-25 | SAMN14518290 | PRJNA622505 | Smithsonian Conservation Biology Institute | mammals | ||
| scimitar-horned oryx | Oryx dammah (3) | GCA_014754425.1_SCBI_Odam_1.0 | 2,717,521,354 | 10,447 | 100.40M (11) | 373.37K (2,086) | 59534 | 2020-09-25 | Smithsonian Conservation Biology Institute | mammals | ||||
| bats | Sturnira hondurensis (4) | GCA_014824575.2_WHU_Shon_v2.1 | 2,096,623,354 | 26,068 | 10.16M (52) | 2.14M (273) | 192404 | 2020-09-30 | SAMN12282880 | PRJNA554734 | College of Life Sciences at Wuhan University | mammals | ||
| view | bats | Sturnira hondurensis (4) | GCF_014824575.2_WHU_Shon_v2.1 | 2,096,623,354 | 26,068 | 10.16M (52) | 2.14M (273) | 192404 | 2020-09-30 | SAMN12282880 | PRJNA554734 | College of Life Sciences at Wuhan University | mammals | |
| bats | Sturnira hondurensis (4) | GCA_014824575.1_WHU_Shon_v2 | 2,098,361,935 | 27,486 | 10.16M (52) | 2.14M (273) | 192404 | 2020-09-30 | College of Life Sciences at Wuhan University | mammals | ||||
| view | bats | Sturnira hondurensis (4) | GCF_014824575.1_WHU_Shon_v2 | 2,098,361,935 | 27,486 | 10.16M (52) | 2.14M (273) | 192404 | 2020-09-30 | College of Life Sciences at Wuhan University | mammals | |||
| reed vole | Microtus fortis | GCA_014885135.1_M_Fortis_MF-2015_v1 | 2,189,480,006 | 10,530 | 9.99M (65) | 90.68K (6,516) | 100897 | 2020-10-13 | SAMN07276871 | PRJNA391843 | Shanghai Institute for Biological Sciences, Chinese Academy of Sciences | mammals | ||
| Iberian mole | Talpa occidentalis (2) | GCA_014898055.1_MPIMG_talOcc4 | 2,098,003,508 | 4,424 | 119.79M (8) | 2.61M (211) | 50954 | 2020-10-19 | SAMN10160270 | PRJNA494291 | Max Planck Institute for Molecular Genetics | mammals | ||
| view | Iberian mole | Talpa occidentalis (2) | GCF_014898055.1_MPIMG_talOcc4 | 2,098,020,470 | 4,425 | 119.79M (8) | 2.61M (211) | 50954 | 2020-10-19 | SAMN10160270 | PRJNA494291 | Max Planck Institute for Molecular Genetics | mammals | |
| jaguarundi | Puma yagouaroundi (2) | GCA_014898765.1_PumYag | 2,473,123,098 | 10,947 | 49.27M (15) | 100.21K (7,154) | 1608482 | 2020-10-20 | SAMN14930875 | PRJNA633021 | Felidae consortium | mammals | ||
| view | jaguarundi | Puma yagouaroundi (2) | GCF_014898765.1_PumYag | 2,473,139,798 | 10,948 | 49.27M (15) | 100.21K (7,154) | 1608482 | 2020-10-20 | SAMN14930875 | PRJNA633021 | Felidae consortium | mammals | |
| reindeer | Rangifer tarandus granti | GCA_014898785.1_LSU_RangTar_1.0 | 2,537,222,158 | 17,179 | 9.35M (79) | 231.34K (3,149) | VU | 191431 | 2020-10-21 | SAMN15639372 | PRJNA648372 | Louisiana State University | mammals | |
| lechwe | Kobus leche leche | GCA_014926565.1_Klec_v1.0 | 2,771,252,237 | 57,712 | 3.23M (252) | 66.92K (11,112) | 91880 | 2020-10-23 | SAMN13832371 | PRJNA599106 | Kunming Institute of Zoology | mammals | ||
| dugong | Dugong dugon (2) | GCA_015147995.1_D_dugong_scaffold_01 | 2,620,890,670 | 116,852 | 31.10K (25,148) | 19.05K (40,250) | VU | 29137 | 2020-08-31 | SAMD00237432 | PRJDB10190 | Environmental Genomics Office, Center for Environmental Biology and Ecosystem Studies, National Institute for Environmental Studies | mammals | |
| Leschenault's rousette | Rousettus leschenaultii | GCA_015472975.1_rouLes_1.0 | 1,918,041,062 | 8,141 | 32.72M (16) | 40.48K (13,548) | 9408 | 2020-10-30 | SAMD00237936 | PRJDB10312 | Comparative Genomics Laboratory, Center for Information Biology, National Institute of Genetics | mammals | ||
| Australian echidna | Tachyglossus aculeatus (4) | GCA_015598185.1_mTacAcu1 | 2,168,405,530 | 318,768 | 38.57M (18) | 25.01K (19,795) | 9261 | 2020-11-19 | SAMN12991080 | PRJNA576333 | BGI | mammals | ||
| Australian echidna | Tachyglossus aculeatus (4) | GCA_015852505.1_mTacAcu1.pri | 2,213,020,595 | 311 | 63.38M (10) | 19.86M (36) | 9261 | 2020-12-09 | SAMN12634963 | PRJNA607237 | Vertebrate Genomes Project | mammals | ||
| Australian echidna | Tachyglossus aculeatus (4) | GCA_015852515.1_mTacAcu1.alt | 1,885,160,879 | 3,482 | 948.18K (510) | 944.52K (511) | 9261 | 2020-12-08 | SAMN12634963 | PRJNA607238 | G10K | mammals | ||
| view | Australian echidna | Tachyglossus aculeatus (4) | GCF_015852505.1_mTacAcu1.pri | 2,213,004,214 | 310 | 63.38M (10) | 19.86M (36) | 9261 | 2020-12-09 | SAMN12634963 | PRJNA607237 | Vertebrate Genomes Project | mammals | |
| kinkajou | Potos flavus | GCA_015708855.1_Pflavus_platanus500 | 2,208,185,899 | 15,702 | 3.56M (175) | 20.85K (29,513) | 29067 | 2020-12-01 | SAMN13795725 | PRJNA600180 | Smithsonian Herndon Data Center | mammals | ||
| raccoon | Procyon lotor | GCA_015708975.1_Plotor_platanus500 | 2,251,279,544 | 49,251 | 1.45M (416) | 12.04K (49,425) | 9654 | 2020-12-01 | SAMN08536241 | PRJNA600180 | Smithsonian Herndon Data Center | mammals | ||
| brush rabbit | Sylvilagus bachmani | GCA_015711505.1_Sylvilagus_bachmani_HiC | 2,686,383,908 | 524,013 | 110.46M (11) | 58.37K (12,875) | 365149 | 2020-12-04 | SAMN15801470 | PRJNA512907 | DNA Zoo | mammals | ||
| view | yellow-footed antechinus | Antechinus flavipes | GCA_016432865.1_AdamAnt | 3,192,697,873 | 487 | 636.72M (3) | 51.84M (16) | 38775 | 2021-01-06 | SAMN16807749 | PRJNA565840 | Nanjing Normal University | mammals | |
| roan antelope | Hippotragus equinus | GCA_016433095.1_ASM1643309v1 | 2,603,424,346 | 16,880 | 8.36M (93) | 237.16K (3,204) | 37186 | 2020-12-29 | SAMN16987477 | PRJNA682311 | CIBIO, University of Porto | mammals | ||
| Agile Gracile Mouse Opossum | Gracilinanus agilis (2) | GCA_016433145.1_AgileGrace | 3,701,017,385 | 60,713 | 683.52M (3) | 73.17K (13,336) | 191870 | 2021-01-06 | SAMN16807781 | PRJNA565840 | Nanjing Normal University | mammals | ||
| view | Agile Gracile Mouse Opossum | Gracilinanus agilis (2) | GCF_016433145.1_AgileGrace | 3,701,033,721 | 60,714 | 683.52M (3) | 73.17K (13,336) | 191870 | 2021-01-06 | SAMN16807781 | PRJNA565840 | Nanjing Normal University | mammals | |
| leopard cat | Prionailurus bengalensis (4) | GCA_016509475.2_Fcat_Pben_1.1_paternal_pri | 2,435,702,060 | 83 | 148.59M (7) | 82.62M (11) | 37029 | 2021-01-06 | SAMN16486448 | PRJNA682572 | Texas A&M University | mammals | ||
| leopard cat | Prionailurus bengalensis (4) | GCA_018119505.1_PriBen1.0 | 2,488,910,774 | 37,203 | 996.68K (696) | 16.82K (35,675) | 37029 | 2021-04-21 | SAMN15671325 | PRJNA649572 | Felidae consortium | mammals | ||
| view | leopard cat | Prionailurus bengalensis (4) | GCF_016509475.1_Fcat_Pben_1.1_paternal_pri | 2,435,718,761 | 84 | 148.59M (7) | 82.62M (11) | 37029 | 2021-01-06 | SAMN16486448 | PRJNA682572 | Texas A&M University | mammals | |
| carnivores | Prionailurus bengalensis (4) | GCA_016509475.1_Fcat_Pben_1.0_paternal_pri | 2,435,702,060 | 83 | 94.62M (9) | 82.62M (11) | 2782171 | 2021-01-06 | Texas A&M University | mammals | ||||
| brown antechinus | Antechinus stuartii | GCA_016696395.1_USYD_AStu_M | 3,307,090,682 | 30,796 | 72.73M (14) | 77.88K (12,150) | 9283 | 2021-01-15 | SAMN16204884 | PRJNA664282 | University of Sydney | mammals | ||
| rodents | Hystrix brachyura | GCA_016801275.1_DSBC_Hbra_1.0 | 2,257,332,368 | 151,118 | 2.98M (208) | 29.44K (22,012) | 143286 | 2021-02-02 | SAMN10059123 | PRJNA490787 | DNA Stories Bioinformatics Center | mammals | ||
| Indian pangolin | Manis crassicaudata | GCA_016801295.1_DSBC_Mcra_1.0 | 2,124,325,914 | 422,412 | 14.16K (38,581) | 7.45K (68,286) | EN | 1496684 | 2021-02-02 | SAMN10059124 | PRJNA490788 | DNA Stories Bioinformatics Center | mammals | |
| caracal | Caracal caracal | GCA_016801355.1_CarCar1.0 | 2,420,801,777 | 9,020 | 2.09M (333) | 32.92K (20,256) | 61394 | 2021-02-02 | SAMN15096300 | PRJNA637064 | Felidae consortium | mammals | ||
| Common warthog | Phacochoerus africanus (3) | GCA_016906955.1_ROS_Pafr_v1 | 2,435,099,834 | 195 | 141.89M (6) | 10.60M (71) | 41426 | 2021-02-19 | SAMN15809474 | PRJNA656957 | The Roslin Institute | mammals | ||
| Common warthog | Phacochoerus africanus (3) | GCA_019331625.1_CAU-W | 2,416,669,379 | 19,367 | 13.75M (53) | 212.10K (3,008) | 41426 | 2021-07-23 | SAMN17293408 | PRJNA691462 | China Agricultural University | mammals | ||
| view | common warthog (WHEZ1 2021) | Phacochoerus africanus (3) | GCF_016906955.1_ROS_Pafr_v1 | 2,435,083,091 | 194 | 141.89M (6) | n/a | n/a | n/a | mammals | ||||
| aardwolf | Proteles cristata cristata | GCA_017311185.1_Proteles_cristatus_TS307_19_07_2019 | 2,388,965,834 | 5,669 | 1.31M (516) | 1.26M (536) | 2793304 | 2021-03-09 | SAMN16929441 | PRJNA681015 | CNRS | mammals | ||
| Ganges River dolphin | Platanista gangetica | GCA_017311385.1_HRRL_Platanista_gangetica_1.0 | 2,238,863,808 | 1,309,164 | 3.09K (207,385) | EN | 118798 | 2021-03-09 | SAMN16703806 | PRJNA675309 | Chittagong Veterinary and Animal Sciences University; University of Chittagong (HRRL) | mammals | ||
| bat-eared fox | Otocyon megalotis megalotis | GCA_017311455.1_Otocyon_megalotis_TS305_17_09_2019 | 2,374,659,532 | 11,079 | 728.07K (920) | 718.01K (934) | 2793302 | 2021-03-09 | SAMN16929439 | PRJNA681015 | CNRS | mammals | ||
| black-lipped pika | Ochotona curzoniae (2) | GCA_017591425.1_NIBS_Ocur_1.0 | 2,086,130,860 | 2,214 | 33.88M (21) | 29.56M (23) | 130825 | 2021-03-26 | SAMN13876228 | PRJNA601872 | National Institute of Biological Sciences, Beijing | mammals | ||
| view | black-lipped pika | Ochotona curzoniae (2) | GCF_017591425.1_NIBS_Ocur_1.0 | 2,086,129,077 | 2,214 | 33.88M (21) | 29.56M (23) | 130825 | 2021-03-26 | SAMN13876228 | PRJNA601872 | National Institute of Biological Sciences, Beijing | mammals | |
| giraffe | Giraffa camelopardalis rothschildi | GCA_017591445.1_ASM1759144v1 | 2,441,480,433 | 2,096 | 158.23M (7) | 11.32M (61) | VU | 2740528 | 2021-03-30 | SAMN14677183 | PRJNA627604 | Northwestern Polytechnical University | mammals | |
| domestic pig | Sus scrofa domesticus (2) | GCA_017957985.1_ASM1795798v1 | 2,510,037,796 | 253 | 138.97M (8) | 51.01M (15) | 9825 | 2021-04-15 | SAMN14543579 | PRJNA613163 | Chinese Academy of Agricultural Sciences | mammals | ||
| domestic pig | Sus scrofa domesticus (2) | GCA_020567905.1_ASM2056790v1 | 2,440,945,073 | 120 | 139.03M (7) | 26.07M (29) | 9825 | 2021-10-26 | SAMN12123497 | PRJNA531381 | Hunan Agricultural university | mammals | ||
| fishing cat | Prionailurus viverrinus (3) | GCA_018119265.1_PriViv1.0 | 2,445,563,378 | 10,331 | 3.07M (225) | 33.72K (19,200) | VU | 61388 | 2021-04-21 | SAMN15669430 | PRJNA649563 | Felidae consortium | mammals | |
| view | fishing cat (Anna 2022 U Missouri) | Prionailurus viverrinus (3) | GCF_022837055.1_UM_Priviv_1.0 | 2,461,562,329 | 192 | 144.91M (7) | VU | n/a | n/a | n/a | mammals | |||
| creeping vole | Microtus oregoni (2) | GCA_018167655.1_Mior012 | 3,017,107,361 | 2,147 | 34.83M (28) | 111838 | 2021-04-26 | SAMN18478481 | PRJNA505851 | Oklahoma State Universtiy | mammals | |||
| view | creeping vole | Microtus oregoni (2) | GCF_018167655.1_Mior012 | 3,017,107,361 | 2,147 | 34.83M (28) | 111838 | 2021-04-26 | SAMN18478481 | PRJNA505851 | Oklahoma State Universtiy | mammals | ||
| Kordofan giraffe | Giraffa camelopardalis antiquorum | GCA_018282235.1_ASM1828223v1 | 2,463,975,216 | 10,445 | 27.50M (25) | 228.44K (3,139) | VU | 439324 | 2021-05-05 | SAMN15027847 | PRJNA635165 | Senckenberg Nature Research Society | mammals | |
| beefalo | Bos taurus x Bison bison (2) | GCA_018282365.1_ARS-UCSC_bison1.0 | 2,651,593,212 | 774 | 87.75M (12) | 68.47M (14) | 297284 | 2021-05-06 | SAMN16780309 | PRJNA677946 | USDA ARS | mammals | ||
| beefalo | Bos taurus x Bison bison (2) | GCA_018282465.1_ARS_Simm1.0 | 2,861,703,644 | 1,314 | 102.50M (12) | 70.61M (15) | 297284 | 2021-05-06 | SAMN16780309 | PRJNA677947 | USDA ARS | mammals | ||
| Geoffroy's cat | Leopardus geoffroyi (2) | GCA_018350155.1_O.geoffroyi_Oge1_pat1.0 | 2,426,370,816 | 46 | 152.61M (7) | 104.47M (9) | 46844 | 2021-05-13 | SAMN19729386 | PRJNA684599 | Texas A&M University | mammals | ||
| view | Geoffroy's cat | Leopardus geoffroyi (2) | GCF_018350155.1_O.geoffroyi_Oge1_pat1.0 | 2,426,387,554 | 47 | 152.61M (7) | 104.47M (9) | 46844 | 2021-05-13 | SAMN19729386 | PRJNA684599 | Texas A&M University | mammals | |
| tiger | Panthera tigris (4) | GCA_018350195.2_P.tigris_Pti1_mat1.1 | 2,408,678,698 | 74 | 146.94M (7) | 74.39M (12) | EN | 9694 | 2021-05-13 | SAMN17054330 | PRJNA684344 | Texas A&M University | mammals | |
| view | tiger | Panthera tigris (4) | GCF_018350195.1_P.tigris_Pti1_mat1.1 | 2,408,695,688 | 75 | 146.94M (7) | 74.39M (12) | EN | 9694 | 2021-05-13 | SAMN17054330 | PRJNA684344 | Texas A&M University | mammals |
| carnivores | Panthera tigris (4) | GCA_018350195.1_P.tigris_Pti1_mat1.0 | 2,408,678,698 | 74 | 146.94M (7) | 74.39M (12) | EN | 235915 | 2021-05-13 | Texas A&M University | mammals | |||
| spectacled bear | Tremarctos ornatus | GCA_018398825.1_TreOrn1.0 | 2,232,736,945 | 12,402 | 21.12M (30) | 23.52K (26,657) | VU | 9638 | 2021-05-19 | SAMN09225636 | PRJNA472085 | University of California, Santa Cruz | mammals | |
| Iriomote cat | Prionailurus iriomotensis | GCA_018403415.1_P_iriomotensis_scaffold_01 | 2,382,008,360 | 57,170 | 102.08K (6,839) | 27.85K (24,923) | 37030 | 2021-03-31 | SAMD00283121 | PRJDB11287 | Environmental Genomics Office Center for Environmetal Biology and Ecosystem Studies, National Institute for Environmental Studies | mammals | ||
| greater Indian rhinoceros | Rhinoceros unicornis (3) | GCA_018403435.2_R_unicornis_scaffold_02 | 2,375,051,758 | 7,615 | 663.63K (1,035) | VU | 9809 | 2021-08-25 | SAMD00283119 | PRJDB11285 | Environmental Genomics Office Center for Environmetal Biology and Ecosystem Studies, National Institute for Environmental Studies | mammals | ||
| greater Indian rhinoceros | Rhinoceros unicornis (3) | GCA_019022865.1_ASM1902286v1 | 2,523,368,007 | 5,872 | 27.29M (27) | 139.64K (4,960) | VU | 9809 | 2021-06-24 | SAMN17775827 | PRJNA687817 | University of copenhagen | mammals | |
| greater Indian rhinoceros | Rhinoceros unicornis (3) | GCA_018403435.1_R_unicornis_scaffold_01 | 2,416,856,684 | 93,041 | 92.44K (7,477) | 44.16K (15,550) | VU | 9809 | 2021-03-31 | Environmental Genomics Office Center for Environmetal Biology and Ecosystem Studies, National Institute for Environmental Studies | mammals | |||
| banner-tailed kangaroo rat | Dipodomys spectabilis (2) | GCA_019054845.1_ASM1905484v1 | 2,844,766,008 | 2,026 | 9.61M (69) | 105255 | 2021-06-29 | SAMN19232064 | PRJNA730493 | Auburn University | mammals | |||
| view | banner-tailed kangaroo rat | Dipodomys spectabilis (2) | GCF_019054845.1_ASM1905484v1 | 2,844,766,008 | 2,026 | 9.61M (69) | 105255 | 2021-06-29 | SAMN19232064 | PRJNA730493 | Auburn University | mammals | ||
| least weasel | Mustela nivalis (2) | GCA_019141135.1_MusNiv_alt1.0 | 2,500,964,999 | 31,995 | 24.87M (29) | 195.31K (3,747) | 36239 | 2021-07-06 | SAMN18043446 | PRJNA704796 | CIBIO-InBIO | mammals | ||
| least weasel | Mustela nivalis (2) | GCA_019141155.1_MusNiv_Pri1.0 | 2,501,179,699 | 31,995 | 24.90M (29) | 195.93K (3,746) | 36239 | 2021-07-06 | SAMN18043446 | PRJNA704797 | CIBIO-InBIO | mammals | ||
| view | greater spear-nosed bat (2021 Texas Tech U) | Phyllostomus hastatus (3) | GCF_019186645.2_TTU_PhHast_1.1 | 2,089,223,459 | 534 | 39.16M (18) | 31.53M (20) | 9423 | 2021-07-09 | SAMN19371543 | PRJNA733208 | Texas Tech University | mammals | |
| greater spear-nosed bat | Phyllostomus hastatus (3) | GCA_019186645.1_TTU_PhHast_1 | 2,089,300,398 | 545 | 39.16M (18) | 31.53M (20) | 9423 | 2021-07-09 | Texas Tech University | mammals | ||||
| water vole | Microtus richardsoni | GCA_019206885.1_ASM1920688v1 | 2,537,622,786 | 1,647,445 | 12.44K (48,629) | 11.06K (57,462) | 111840 | 2021-07-13 | SAMN10536510 | PRJNA509068 | IRIDIAN GENOMES | mammals | ||
| even-toed ungulates | Cervus canadensis (2) | GCA_019320065.1_ASM1932006v1 | 2,526,629,436 | 186 | 77.65M (13) | 914.58K (803) | 1574408 | 2021-07-26 | SAMN15814149 | PRJNA657053 | Iowa State University | mammals | ||
| view | even-toed ungulates | Cervus canadensis (2) | GCF_019320065.1_ASM1932006v1 | 2,526,613,007 | 185 | 77.65M (13) | 914.58K (803) | 1574408 | 2021-07-26 | SAMN15814149 | PRJNA657053 | Iowa State University | mammals | |
| Malayan tiger | Panthera tigris jacksoni | GCA_019348595.1_Maltig1.0 | 2,424,644,036 | 10,077 | 21.30M (29) | 102.50K (6,878) | EN | 419130 | 2021-07-26 | SAMN17816862 | PRJNA548814 | Stanford University | mammals | |
| monito del monte | Dromiciops gliroides (3) | GCA_019393635.1_mDroGli1.pri | 3,303,217,110 | 18 | 670.78M (3) | 38.23M (27) | 33562 | 2021-08-03 | SAMN18857598 | PRJNA728141 | Vertebrate Genomes Project | mammals | ||
| monito del monte | Dromiciops gliroides (3) | GCA_019395325.1_mDroGli1.alt | 2,818,512,018 | 9,926 | 490.19K (1,666) | 490.19K (1,666) | 33562 | 2021-07-29 | SAMN18857598 | PRJNA728142 | Vertebrate Genomes Project | mammals | ||
| view | monito del monte | Dromiciops gliroides (3) | GCF_019393635.1_mDroGli1.pri | 3,303,199,800 | 17 | 670.78M (3) | 38.23M (27) | 33562 | 2021-08-03 | SAMN18857598 | PRJNA728141 | Vertebrate Genomes Project | mammals | |
| insectivores | Galemys pyrenaicus | GCA_019455555.1_Gpyr_1.0 | 1,828,347,170 | 12,306 | 8.50M (66) | 64.54K (8,046) | EN | 202257 | 2021-08-05 | SAMN18106611 | PRJNA705855 | Institute of Evolutionary Biology (CSIC-UPF) | mammals | |
| even-toed ungulates | Addax nasomaculatus | GCA_019593525.1_ASM1959352v1 | 2,795,170,309 | 86,923 | 20.76M (37) | 17.03K (42,125) | CR | 59515 | 2021-08-13 | SAMN19946357 | PRJNA742532 | University of Potsdam | mammals | |
| African soft-furred rat | Mastomys natalensis (2) | GCA_019843795.1_ASM1984379v1 | 2,485,459,324 | 320,461 | 16.56K (42,019) | 11.39K (61,334) | 10112 | 2021-09-01 | SAMN16477138 | PRJNA669840 | University of Pennsylvania | mammals | ||
| delectable soft-furred mouse | Praomys delectorum | GCA_019843815.1_ASM1984381v1 | 2,406,247,807 | 247,307 | 22.33K (30,957) | 13.91K (48,285) | 119565 | 2021-09-01 | SAMN16477137 | PRJNA669840 | University of Pennsylvania | mammals | ||
| common thicket rat | Grammomys dolichurus | GCA_019843835.1_ASM1984383v1 | 2,089,776,775 | 509,072 | 5.81K (114,577) | 5.40K (124,794) | 491754 | 2021-09-01 | SAMN16477139 | PRJNA669840 | University of Pennsylvania | mammals | ||
| Allen's wood mouse | Hylomyscus alleni | GCA_019843855.1_ASM1984385v1 | 2,183,244,924 | 583,570 | 4.57K (135,744) | 4.20K (148,958) | 34858 | 2021-09-01 | SAMN16477136 | PRJNA669840 | University of Pennsylvania | mammals | ||
| Mount Data shrew rat | Rhynchomys soricoides | GCA_019843965.1_ASM1984396v1 | 2,183,375,489 | 14,193 | 7.86M (77) | 79.77K (7,881) | 1217597 | 2021-09-01 | SAMN16477141 | PRJNA669840 | University of Pennsylvania | mammals | ||
| mesic four-striped grass rat | Rhabdomys dilectus | GCA_019844195.1_ASM1984419v1 | 2,257,796,536 | 30,953 | 2.32M (252) | 27.27K (24,377) | 996586 | 2021-09-01 | SAMN16477140 | PRJNA669840 | University of Pennsylvania | mammals | ||
| reindeer | Rangifer tarandus caribou | GCA_019903745.1_ULRtarCaribou_2 | 2,584,922,709 | 13,341 | 29.23M (28) | 167.69K (4,181) | VU | 86327 | 2021-09-08 | SAMN19775459 | PRJNA739179 | Laval Univeristy | mammals | |
| jungle cat | Felis chaus | GCA_019924945.1_FelChav1.0 | 2,428,304,365 | 53 | 148.55M (7) | 91.19M (9) | 61376 | 2021-09-14 | SAMN17103467 | PRJNA686007 | Texas A&M University | mammals | ||
| Dama gazelle | Nanger dama ruficollis | GCA_019969365.1_SCBI_Ndam_1.0 | 3,008,822,536 | 36,680 | 156.27M (9) | 270.76K (3,100) | CR | 67941 | 2021-09-14 | SAMN18578434 | PRJNA718892 | Smithsonian Conservation Biology Institute | mammals | |
| gray squirrel | Neosciurus carolinensis (5) | GCA_020004445.1_ASM2000444v1 | 3,527,038,434 | 511,233 | 1.02M (825) | 33.02K (25,892) | 30640 | 2021-09-15 | SAMN11605339 | PRJNA541329 | Novartis AG | mammals | ||
| gray squirrel | Neosciurus carolinensis (5) | GCA_902685475.1_mSciCar1.1_alternate_haplotype | 2,057,949,030 | 9,508 | 492.51K (1,082) | 492.51K (1,082) | 30640 | 2019-11-26 | SAMEA994726 | PRJEB35385 | SC | mammals | ||
| gray squirrel | Neosciurus carolinensis (5) | GCA_902686445.2_mSciCar1.2 | 2,815,413,801 | 753 | 148.23M (8) | 13.98M (52) | 30640 | 2020-07-31 | SAMEA994726 | PRJEB35386 | SC | mammals | ||
| view | gray squirrel | Neosciurus carolinensis (5) | GCF_902686445.1_mSciCar1.2 | 2,815,397,268 | 752 | 148.23M (8) | n/a | n/a | n/a | mammals | ||||
| gray squirrel | Neosciurus carolinensis (5) | GCA_902686445.1_mSciCar1.1 | 2,815,397,268 | 752 | 148.23M (8) | 13.98M (52) | 30640 | 2019-11-26 | SC | mammals | ||||
| American mink | Neogale vison (3) | GCA_020171115.1_ASM_NN_V1 | 2,681,198,719 | 182 | 220.35M (6) | 452646 | 2021-09-29 | SAMN19764019 | PRJNA741394 | Dalhousie University | mammals | |||
| view | American mink | Neogale vison (3) | GCA_900108605.1_NNQGG.v01 | 2,447,189,291 | 7,175 | 6.81M (103) | 32.34K (20,101) | 452646 | 2018-01-02 | SAMEA4493372 | PRJEB15663 | Center for Quantitative Genetics and Genomics | mammals | |
| view | American mink | Neogale vison (3) | GCF_020171115.1_ASM_NN_V1 | 2,681,215,271 | 183 | 220.35M (6) | 452646 | 2021-09-29 | SAMN19764019 | PRJNA741394 | Dalhousie University | mammals | ||
| Gongshanensis muntjac | Muntiacus gongshanensis | GCA_020226025.1_ASM2022602v1 | 2,475,743,641 | 314 | 24.47M (30) | 24.23M (31) | 145526 | 2021-10-04 | SAMN15339012 | PRJNA640966 | Northwestern Polytechnical University | mammals | ||
| Tayra | Eira barbara (2) | GCA_020311275.1_ASM2031127v1 | 2,469,724,418 | 14,563 | 42.54M (17) | 285.06K (2,553) | 204263 | 2021-10-05 | SAMN19323876 | PRJNA732553 | Leibniz Institute for Zoo and Wildlife Research (IZW) | mammals | ||
| Tayra | Eira barbara (2) | GCA_020311295.1_ASM2031129v1 | 2,467,579,543 | 14,563 | 42.54M (17) | 284.02K (2,563) | 204263 | 2021-10-05 | SAMN19323876 | PRJNA732552 | Leibniz Institute for Zoo and Wildlife Research (IZW) | mammals | ||
| water vole | Microtus richardsoni arvicoloides | GCA_020387435.1_ASM2038743v1 | 2,362,086,622 | 31,632 | 2.30M (278) | 38.58K (17,599) | 2821547 | 2021-10-08 | SAMN16621608 | PRJNA673719 | The Ohio State University | mammals | ||
| montane vole | Microtus montanus | GCA_020392405.1_ASM2039240v1 | 2,335,504,509 | 13,074 | 2.72M (138) | 2.90K (166,204) | 88450 | 2021-10-08 | SAMN16625814 | PRJNA673873 | The Ohio State University | mammals | ||
| southern flying squirrel | Glaucomys volans | GCA_020662805.1_ASM2066280v1 | 2,582,196,772 | 61,855 | 452.49K (1,592) | 75.53K (9,453) | 64683 | 2021-10-28 | SAMN18810840 | PRJNA723289 | Wildlife Research and Monitoring Section | mammals | ||
| fox squirrel | Sciurus niger | GCA_020740815.1_VCOM_Snig_1.0 | 2,985,236,946 | 32,830 | 183.78K (4,370) | 182.34K (4,407) | 34861 | 2021-11-04 | SAMN20094673 | PRJNA744496 | Edward Via College of Osteopathic Medicine | mammals | ||
| view | eastern quoll | Dasyurus viverrinus | GCA_020854095.1_UniMelb_DasViv_v1.0 | 3,139,221,772 | 76 | 628.49M (3) | 13.75M (72) | EN | 9279 | 2021-11-12 | SAMN21032600 | PRJNA758704 | The University of Melbourne | mammals |
| mule deer | Odocoileus hemionus | GCA_020976825.1_BYU_Ohem_2021 | 2,609,301,826 | 5,513 | 72.14M (14) | 28.57M (26) | 9872 | 2021-11-30 | SAMN20587837 | PRJNA752226 | Brigham Young University | mammals | ||
| Bengal tiger | Panthera tigris tigris (2) | GCA_021130815.1_PanTigT.MC.v3 | 2,406,136,656 | 1,052 | 145.48M (7) | 4.41M (153) | EN | 74535 | 2021-12-09 | SAMN19312021 | PRJNA732096 | SciGenom Research Foundation | mammals | |
| Bengal tiger | Panthera tigris tigris (2) | GCA_021131075.1_PanTigT.SI.v4 | 2,534,330,400 | 3,808 | 147.30M (7) | 2.14M (222) | EN | 74535 | 2021-12-09 | SAMN19312022 | PRJNA732096 | SciGenom Research Foundation | mammals | |
| view | bobcat (2022 UCLA) | Lynx rufus (3) | GCF_022079265.1_mLynRuf1.p | 2,439,239,374 | 75 | 142.13M (7) | n/a | n/a | n/a | mammals | ||||
| view | brown bear (2022 WashU) | Ursus arctos (2) | GCF_023065955.1_UrsArc1.0 | 2,474,258,672 | 902 | 70.08M (15) | n/a | n/a | n/a | mammals | ||||
| wolverine | Gulo gulo (2) | GCA_900006375.2_Gulo_2.2_annotated | 2,423,180,524 | 47,417 | 178.27K (3,880) | 3.66K (172,738) | 48420 | 2018-12-06 | SAMEA3522159 | PRJEB10674 | Uppsala University | mammals | ||
| wolverine | Gulo gulo (2) | GCA_900006375.1_Gulo_2.2 | 2,423,180,524 | 47,417 | 178.27K (3,880) | 48420 | 2018-7-1 | Uppsala University | mammals | |||||
| view | Ryukyu mouse | Mus caroli (3) | GCA_900094665.2_CAROLI_EIJ_v1.1 | 2,553,112,587 | 3,162 | 122.63M (9) | 30.92K (21,590) | 10089 | 2017-04-28 | SAMEA3367631 | PRJEB14895 | EBI | mammals | |
| view | Ryukyu mouse | Mus caroli (3) | GCF_900094665.1_CAROLI_EIJ_v1.1 | 2,553,128,900 | 3,163 | 122.63M (9) | 30.92K (21,591) | 10089 | 2017-04-28 | SAMEA3367631 | PRJEB14895 | EBI | mammals | |
| Ryukyu mouse | Mus caroli (3) | GCA_900094665.1_CAROLI_EIJ_v1 | 2,501,003,384 | 26 | 145.28M (8) | 10089 | 2017-1-11 | EBI | mammals | |||||
| shrew mouse | Mus pahari (3) | GCA_900095145.2_PAHARI_EIJ_v1.1 | 2,475,012,951 | 2,581 | 111.41M (9) | 29.46K (22,850) | 10093 | 2017-04-28 | SAMEA3367645 | PRJEB14896 | EBI | mammals | ||
| view | shrew mouse | Mus pahari (3) | GCF_900095145.1_PAHARI_EIJ_v1.1 | 2,475,012,951 | 2,581 | 111.41M (9) | 29.46K (22,850) | 10093 | 2017-04-28 | SAMEA3367645 | PRJEB14896 | EBI | mammals | |
| shrew mouse | Mus pahari (3) | GCA_900095145.1_PAHARI_EIJ_v1 | 2,426,045,288 | 29 | 111.41M (9) | 10093 | 2017-1-11 | EBI | mammals | |||||
| common wombat | Vombatus ursinus (3) | GCA_900497805.2_bare-nosed_wombat_genome_assembly | 3,486,580,222 | 15,415 | 28.50M (36) | 113.05K (8,744) | 29139 | 2018-12-10 | SAMEA4791334 | PRJEB27783 | MRC Institute of Genetics and Molecular Medicine, University of Edinburgh | mammals | ||
| view | common wombat | Vombatus ursinus (3) | GCF_900497805.2_bare-nosed_wombat_genome_assembly | 3,486,597,218 | 15,416 | 28.50M (36) | 113.05K (8,744) | 29139 | 2018-12-10 | SAMEA4791334 | PRJEB27783 | MRC Institute of Genetics and Molecular Medicine, University of Edinburgh | mammals | |
| common wombat | Vombatus ursinus (3) | GCA_900497805.1_WM_v1.0 | 3,616,511,693 | 15,415 | 29.40M (36) | 29139 | 2018-08-31 | MRC Institute of Genetics and Molecular Medicine, University of Edinburgh | mammals | |||||
| antarctic fur seal | Arctocephalus gazella (2) | GCA_900500725.1_ArcGazv1.4 | 2,313,485,084 | 6,169 | 6.21M (108) | 538.75K (1,232) | 37190 | 2018-08-22 | SAMEA4666125 | PRJEB26995 | LMU | mammals | ||
| antarctic fur seal | Arctocephalus gazella (2) | GCA_900642305.1_arcGaz3 | 2,313,585,684 | 5,180 | 139.18M (7) | 537.42K (1,237) | 37190 | 2019-02-08 | SAMEA4666125 | PRJEB30577 | LMU | mammals | ||
| Spanish lynx | Lynx pardinus | GCA_900661375.1_LYPA1.0 | 2,413,208,909 | 41,700 | 1.52M (425) | 99.54K (6,849) | EN | 191816 | 2019-03-28 | SAMEA3862495 | PRJEB12609 | CNAG | mammals | |
| rodents | Peromyscus nudipes | GCA_902168325.1_Pnud_10x_v1 | 2,440,382,953 | 179,791 | 38.25K (23,030) | 19.83K (36,006) | 162314 | 2019-08-20 | SAMEA5777200 | PRJEB33530 | UNIVERSITY OF NEW HAMPSHIRE | mammals | ||
| Aztec mouse | Peromyscus aztecus | GCA_902168405.1_Pazt_10x_v1 | 2,488,400,533 | 202,228 | 34.92K (24,968) | 19.24K (38,305) | 57100 | 2019-08-22 | SAMEA5777989 | PRJEB33530 | UNIVERSITY OF NEW HAMPSHIRE | mammals | ||
| plateau mouse | Peromyscus melanophrys | GCA_902168415.1_Pmel_10x_v1 | 2,403,713,740 | 178,386 | 32.30K (24,186) | 15.78K (44,600) | 246392 | 2019-08-20 | SAMEA5777993 | PRJEB33530 | UNIVERSITY OF NEW HAMPSHIRE | mammals | ||
| Texas deermouse | Peromyscus attwateri | GCA_902168425.1_Patt_10x_v1 | 2,494,792,707 | 171,913 | 40.05K (23,601) | 20.48K (36,413) | 97206 | 2019-08-20 | SAMEA5777987 | PRJEB33530 | UNIVERSITY OF NEW HAMPSHIRE | mammals | ||
| European polecat | Mustela putorius (10) | GCA_902207235.1_polecat_10x_lmp_bionano | 2,473,818,944 | 14,833 | 25.83M (32) | 5.34M (126) | 9668 | 2019-08-07 | SAMEA5818864 | PRJEB33767 | EI | mammals | ||
| European polecat | Mustela putorius (10) | GCA_902460175.1_polecat_10x_ | 2,456,594,132 | 26,253 | 5.26M (129) | 143.08K (4,916) | 9668 | 2019-08-28 | SAMEA5818864 | PRJEB34121 | EI | mammals | ||
| European polecat | Mustela putorius (10) | GCA_902460185.1_polecat_10x_bionano_ | 2,480,474,418 | 25,834 | 10.84M (67) | 143.08K (4,916) | 9668 | 2019-08-28 | SAMEA5818864 | PRJEB34125 | EI | mammals | ||
| European polecat | Mustela putorius (10) | GCA_902460195.1_polecat_w2rap_k224_ | 2,751,514,980 | 929,245 | 255.13K (2,680) | 155.91K (4,507) | 9668 | 2019-08-28 | SAMEA5818864 | PRJEB34119 | EI | mammals | ||
| European polecat | Mustela putorius (10) | GCA_902460205.1_polecat_10x_lmp_ | 2,464,261,309 | 15,013 | 14.73M (53) | 5.34M (126) | 9668 | 2019-08-28 | SAMEA5818864 | PRJEB34122 | EI | mammals | ||
| Eurasian river otter | Lutra lutra (4) | GCA_902653095.1_mLutLut1.1_alternate_haplotype | 1,081,484,062 | 8,506 | 174.90K (1,412) | 9657 | 2019-12-09 | SAMEA994731 | PRJEB35338 | SC | mammals | |||
| Eurasian river otter | Lutra lutra (4) | GCA_902655055.2_mLutLut1.2 | 2,438,458,878 | 44 | 149.00M (7) | 30.40M (23) | 9657 | 2020-07-31 | SAMEA994731 | PRJEB35339 | SC | mammals | ||
| view | Eurasian river otter | Lutra lutra (4) | GCF_902655055.1_mLutLut1.2 | 2,438,458,878 | 44 | 149.00M (7) | n/a | n/a | n/a | mammals | ||||
| Eurasian river otter | Lutra lutra (4) | GCA_902655055.1_mLutLut1.1 | 2,438,442,342 | 43 | 149.00M (7) | 30.40M (23) | 9657 | 2020-01-11 | SC | mammals | ||||
| view | Eurasian red squirrel | Sciurus vulgaris (3) | GCA_902685485.1_mSciVul1.1_alternate_haplotype | 1,366,022,868 | 10,655 | 193.05K (2,033) | 192.95K (2,033) | 55149 | 2019-11-26 | SAMEA994733 | PRJEB35379 | SC | mammals | |
| Eurasian red squirrel | Sciurus vulgaris (3) | GCA_902686455.2_mSciVul1.2 | 2,878,607,543 | 639 | 153.87M (8) | 16.33M (51) | 55149 | 2020-07-31 | SAMEA994733 | PRJEB35380 | SC | mammals | ||
| view | Eurasian red squirrel | Sciurus vulgaris (3) | GCA_902686455.1_mSciVul1.1 | 2,878,591,032 | 638 | 153.87M (8) | 16.33M (51) | 55149 | 2019-11-26 | SC | mammals | |||
| cactus mouse | Peromyscus eremicus | GCA_902702925.1_Peer1.7.4 | 2,713,541,378 | 6,808 | 119.96M (9) | 64.29K (10,881) | 42410 | 2019-11-26 | SAMEA5799953 | PRJEB33593 | UNIVERSITY OF NEW HAMPSHIRE | mammals | ||
| reindeer | Rangifer tarandus tarandus | GCA_902712895.1_Rtarandus_v2.1 | 2,490,329,208 | 2,302 | 20.75M (34) | 195.71K (3,660) | VU | 86329 | 2021-09-21 | SAMEA6417239 | PRJEB35834 | institute of clinical molecular biology (Kiel) | mammals | |
| Indian flying fox | Pteropus giganteus (2) | GCA_902729225.1_Ma_sr-lr_union100 | 1,985,219,947 | 16,113 | 18.87M (32) | 255.76K (2,141) | 143291 | 2020-04-15 | SAMEA5634742 | PRJEB32728 | CIRI-Inserm-U1111 | mammals | ||
| view | Indian flying fox | Pteropus giganteus (2) | GCF_902729225.1_Ma_sr-lr_union100 | 1,985,219,947 | 16,113 | 18.87M (32) | 255.76K (2,141) | 143291 | 2020-04-15 | SAMEA5634742 | PRJEB32728 | CIRI-Inserm-U1111 | mammals | |
| Southern African pygmy mouse | Mus minutoides (4) | GCA_902729475.2_Mus_minutoides_I6164_v1 | 2,672,390,815 | 17,731 | 6.56M (114) | 74.17K (9,201) | 10105 | 2020-09-25 | SAMEA6377510 | PRJEB35625 | INSTITUT DES SCIENCES DE L'EVOLUTION DE MONTPELLIER, UNIVERSITE DE MONTPELLIER, CNRS-EPHE-IRD-UM | mammals | ||
| Southern African pygmy mouse | Mus minutoides (4) | GCA_902729485.2_Mus_minutoides_I2396_v1 | 2,834,285,774 | 66,350 | 1.07M (654) | 103.65K (6,965) | 10105 | 2020-09-25 | SAMEA6377509 | PRJEB35625 | INSTITUT DES SCIENCES DE L'EVOLUTION DE MONTPELLIER, UNIVERSITE DE MONTPELLIER, CNRS-EPHE-IRD-UM | mammals | ||
| Southern African pygmy mouse | Mus minutoides (4) | GCA_902729475.1_Mus_minutoides_I6164_v1 | 2,619,676,278 | 2,888 | 6.71M (110) | 75.53K (8,875) | 10105 | 2020-09-25 | INSTITUT DES SCIENCES DE L'EVOLUTION DE MONTPELLIER, UNIVERSITE DE MONTPELLIER, CNRS-EPHE-IRD-UM | mammals | ||||
| Southern African pygmy mouse | Mus minutoides (4) | GCA_902729485.1_Mus_minutoides_I2396_v1 | 2,419,477,202 | 6,956 | 1.38M (483) | 115.76K (5,322) | 10105 | 2020-09-25 | INSTITUT DES SCIENCES DE L'EVOLUTION DE MONTPELLIER, UNIVERSITE DE MONTPELLIER, CNRS-EPHE-IRD-UM | mammals | ||||
| snow sheep | Ovis nivicola lydekkeri | GCA_903231385.1_OvNiv1.0 | 2,618,977,458 | 7,157 | 2.01M (398) | 1.77M (438) | 1867112 | 2020-06-16 | SAMEA6833340 | PRJEB38329 | LMU Munich | mammals | ||
| Eurasian water vole | Arvicola amphibius (5) | GCA_903992525.1_mArvAmp1.1_alternate_haplotype | 1,764,008,884 | 16,368 | 147.92K (3,751) | 147.87K (3,752) | 1047088 | 2020-08-04 | SAMEA994740 | PRJEB39549 | SC | mammals | ||
| Eurasian water vole | Arvicola amphibius (5) | GCA_903992535.2_mArvAmp1.2 | 2,297,766,297 | 215 | 158.92M (7) | 5.39M (127) | 1047088 | 2021-05-15 | SAMEA994740 | PRJEB39550 | Wellcome Sanger Institute | mammals | ||
| view | Eurasian water vole | Arvicola amphibius (5) | GCF_903992535.2_mArvAmp1.2 | 2,297,766,297 | 215 | 158.92M (7) | 5.39M (127) | 1047088 | 2021-05-15 | SAMEA994740 | PRJEB39550 | Wellcome Sanger Institute | mammals | |
| Eurasian water vole | Arvicola amphibius (5) | GCA_903992535.1_mArvAmp1.1 | 2,297,765,997 | 216 | 138.66M (7) | 5.39M (127) | 1047088 | 2020-08-06 | SC | mammals | ||||
| view | Eurasian water vole | Arvicola amphibius (5) | GCF_903992535.1_mArvAmp1.1 | 2,297,765,997 | 216 | 138.66M (7) | 5.39M (127) | 1047088 | 2020-08-06 | SC | mammals | |||
| golden spiny mouse | Acomys russatus | GCA_903995435.1_mAcoRus1.1 | 2,301,522,284 | 623 | 66.48M (14) | 4.45M (145) | 60746 | 2020-08-21 | SAMEA104026431 | PRJEB39768 | SC | mammals | ||
| raccoon dog | Nyctereutes procyonoides | GCA_905146905.1_NYPRO_anot_genome | 2,387,080,870 | 810 | 53.96M (17) | 35.08M (24) | 34880 | 2021-02-14 | SAMEA7690874 | PRJEB41734 | Senckenber Biodiversity and Climate Research Centre Frankfurt | mammals | ||
| water buffalo | Bubalus bubalis bubalis | GCA_905249985.1_Buffalo_MAGs | 10,613,571,626 | 600,286 | 33.67K (72,483) | 33.10K (74,143) | 391902 | 2021-07-07 | SAMEA8110765 | PRJEB43196 | GUANGXI UNIVERSITY | mammals | ||
| rodents | Acomys dimidiatus | GCA_907164435.1_mAcoDim1_REL_1905 | 2,302,401,611 | 18,302 | 124.37M (8) | 33.04K (20,276) | 60744 | 2021-07-06 | SAMEA8478151 | PRJEB44012 | WELLCOME TRUST SANGER INSTITUTE | mammals | ||
| Kemp's spiny mouse | Acomys kempi | GCA_907164505.1_mAcoKem2_REL_1905 | 2,162,154,686 | 19 | 125.23M (8) | 33.62K (19,128) | 83762 | 2021-07-06 | SAMEA8478152 | PRJEB44012 | WELLCOME TRUST SANGER INSTITUTE | mammals | ||
| crested rat | Lophiomys imhausi | GCA_907164525.1_mLopImh1.curated_primary_1811 | 2,920,431,132 | 37,524 | 6.44M (125) | 35.79K (22,485) | 248799 | 2021-06-03 | SAMEA8491833 | PRJEB44074 | WELLCOME TRUST SANGER INSTITUTE | mammals | ||
| Percival's spiny mouse | Acomys percivali | GCA_907169655.1_mAcoPer2_REL_1905 | 2,302,049,166 | 22,442 | 126.27M (8) | 26.48K (25,322) | 83527 | 2021-07-06 | SAMEA8478153 | PRJEB44012 | WELLCOME TRUST SANGER INSTITUTE | mammals | ||
| red deer | Cervus elaphus (3) | GCA_910593805.1_mCerEla1.1_alternate_haplotype | 2,903,978,491 | 4,021 | 2.26M (369) | 2.24M (371) | 9860 | 2021-07-07 | SAMEA7523520 | PRJEB45837 | WELLCOME SANGER INSTITUTE | mammals | ||
| red deer | Cervus elaphus (3) | GCA_910594005.1_mCerEla1.1 | 2,886,619,877 | 145 | 83.47M (13) | 68.74M (17) | 9860 | 2021-07-07 | SAMEA7523520 | PRJEB45838 | WELLCOME SANGER INSTITUTE | mammals | ||
| view | red deer | Cervus elaphus (3) | GCF_910594005.1_mCerEla1.1 | 2,886,603,524 | 144 | 83.47M (13) | 68.74M (17) | 9860 | 2021-07-07 | SAMEA7523520 | PRJEB45838 | WELLCOME SANGER INSTITUTE | mammals | |
| Dama gazelle | Nanger dama | GCA_917880005.1_ORGONE_02 | 2,695,171,530 | 1,847 | 37.13M (25) | 37.13M (25) | CR | 67940 | 2021-11-18 | SAMEA9955968 | PRJEB47547 | IBE (Institut de Biologia Evolutiva) | mammals | |
| view | Eurasian badger | Meles meles (4) | GCF_922984935.1_mMelMel3.1_paternal_haplotype | 2,738,694,446 | 538 | 132.96M (8) | 75.21M (12) | 9662 | 2021-12-19 | SAMEA7524400 | PRJEB49353 | WELLCOME SANGER INSTITUTE | mammals | |
| view | plains zebra (Etosha38 2022 UCLA) | n/a | GCF_021613505.1_UCLA_HA_Equagga_1.0 | 2,500,930,762 | 12,507 | 122.56M (9) | n/a | n/a | n/a | mammals | ||||
| chicken | Gallus gallus (15) | GCA_000002315.5_GRCg6a | 1,065,348,650 | 463 | 20.79M (12) | 17.49M (19) | 9031 | 2018-03-27 | SAMN02981218 | PRJNA13342 | Genome Reference Consortium | birds | ||
| chicken | Gallus gallus (15) | GCA_002798355.1_Ogye1.0 | 1,021,022,236 | 1,822 | 90.11M (4) | 639.81K (451) | 9031 | 2017-12-05 | SAMN07713967 | PRJNA412424 | Hanyang University | birds | ||
| chicken | Gallus gallus (15) | GCA_016699485.1_bGalGal1.mat.broiler.GRCg7b | 1,053,332,251 | 214 | 90.86M (4) | 18.83M (18) | 9031 | 2021-01-19 | SAMN15960293 | PRJNA660757 | Vertebrate Genomes Project | birds | ||
| view | chicken | Gallus gallus (15) | GCF_016699485.2_bGalGal1.mat.broiler.GRCg7b | 1,053,332,251 | 214 | 90.86M (4) | 18.83M (18) | 9031 | 2021-01-19 | SAMN15960293 | PRJNA660757 | Vertebrate Genomes Project | birds | |
| view | white leghorn X broiler chicken (leghorn haplotype v2 VGP 2021) | Gallus gallus (15) | GCF_016700215.2_bGalGal1.pat.whiteleghornlayer.GRCg7w | 1,050,511,239 | 276 | 90.56M (4) | n/a | n/a | n/a | birds | ||||
| view | chicken | Gallus gallus (15) | GCF_016700215.1_bGalGal1.pat.whiteleghornlayer.GRCg7w | 953,182,234 | 255 | 90.56M (4) | 19.68M (15) | 9031 | 2021-01-19 | SAMN15960293 | PRJNA660758 | Vertebrate Genomes Project | birds | |
| turkey | Meleagris gallopavo (10) | GCA_000146605.4_Turkey_5.1 | 1,115,474,681 | 185,175 | 3.90M (80) | 27.08K (11,316) | 9103 | 2019-10-21 | SAMN02981253 | PRJNA42129 | Turkey Genome Consortium | birds | ||
| view | turkey | Meleagris gallopavo (10) | GCA_905368555.1_MGAL_WU_HG_1.0 | 1,001,818,376 | 151 | 70.34M (5) | 26.55M (12) | 9103 | 2021-03-26 | SAMEA7852930 | PRJEB42643 | Plant Sciences | birds | |
| view | turkey | Meleagris gallopavo (10) | GCF_000146605.3_Turkey_5.1 | 1,115,474,681 | 185,175 | 3.90M (80) | 27.08K (11,316) | 9103 | 2014-11-24 | SAMN02981253 | PRJNA42129 | Turkey Genome Consortium | birds | |
| zebra finch | Taeniopygia guttata (28) | GCA_000151805.2_Taeniopygia_guttata-3.2.4 | 1,232,118,738 | 37,095 | 8.24M (37) | 38.64K (8,015) | 59729 | 2013-02-08 | SAMN02981239 | PRJNA17289 | Washington University Genome Sequencing Center | birds | ||
| zebra finch | Taeniopygia guttata (28) | GCA_002008985.2_Tgut_diploid_1.0 | 1,982,686,095 | 3,347 | 4.30M (119) | 59729 | 2017-02-28 | SAMN02981239 | PRJNA368994 | Pacific Biosciences | birds | |||
| zebra finch | Taeniopygia guttata (28) | GCA_003957525.2_bTaeGut1.4.alt | 887,567,949 | 1,646 | 3.56M (64) | 3.56M (64) | 59729 | 2021-04-28 | SAMN02981239 | PRJNA489099 | Vertebrate Genomes Project | birds | ||
| zebra finch | Taeniopygia guttata (28) | GCA_003957565.4_bTaeGut1.4.pri | 1,056,271,264 | 199 | 70.98M (6) | 8.96M (32) | 59729 | 2021-05-04 | SAMN02981239 | PRJNA489098 | Vertebrate Genomes Project | birds | ||
| zebra finch | Taeniopygia guttata (28) | GCA_008822105.2_bTaeGut2.pat.W.v2 | 1,068,988,109 | 205 | 70.88M (6) | 4.38M (63) | 59729 | 2020-02-12 | SAMN09946140 | PRJNA555095 | Vertebrate Genomes Project | birds | ||
| view | zebra finch | Taeniopygia guttata (28) | GCA_008822115.3_bTaeGut2.mat.v3 | 995,952,786 | 206 | 71.67M (5) | 5.53M (55) | 59729 | 2020-02-21 | SAMN09946140 | PRJNA489100 | Vertebrate Genomes Project | birds | |
| view | zebra finch | Taeniopygia guttata (28) | GCA_008822125.1_bTaeGut2pat | 1,047,569,904 | 202 | 71.34M (5) | 4.44M (61) | 59729 | 2019-10-03 | SAMN09946140 | PRJNA489101 | Vertebrate Genomes Project | birds | |
| view | zebra finch | Taeniopygia guttata (28) | GCA_009859025.1_bTaeGut2.p.v1.alt | 947,919,714 | 4,677 | 1.02M (240) | 1.02M (240) | 59729 | 2020-01-13 | SAMN09946140 | PRJNA489187 | Vertebrate Genomes Project | birds | |
| view | zebra finch | Taeniopygia guttata (28) | GCA_009859065.2_bTaeGut2.pri.v2 | 1,106,297,559 | 541 | 71.64M (6) | 4.02M (69) | 59729 | 2020-04-01 | SAMN09946140 | PRJNA489186 | Vertebrate Genomes Project | birds | |
| view | zebra finch | Taeniopygia guttata (28) | GCF_003957565.2_bTaeGut1.4.pri | 1,056,271,262 | 199 | 70.98M (6) | 8.96M (32) | 59729 | 2021-05-04 | SAMN02981239 | PRJNA489098 | Vertebrate Genomes Project | birds | |
| view | zebra finch | Taeniopygia guttata (28) | GCA_003957525.1_bTaeGut1_v1.h | 965,644,423 | 5,336 | 3.00M (76) | 3.00M (76) | 59729 | 2018-12-20 | Vertebrate Genomes Project | birds | |||
| view | zebra finch | Taeniopygia guttata (28) | GCA_003957565.2_bTaeGut1_v1.p | 1,058,012,133 | 135 | 70.43M (6) | 12.00M (22) | 59729 | 2019-05-16 | Vertebrate Genomes Project | birds | |||
| budgerigar | Melopsittacus undulatus (6) | GCA_000238935.1_Melopsittacus_undulatus_6.3 | 1,117,355,426 | 25,211 | 10.61M (28) | 55.63K (5,477) | 13146 | 2012-01-02 | SAMN02981360 | PRJNA72527 | The Genome Institute, Washington University at St. Louis | birds | ||
| view | budgerigar | Melopsittacus undulatus (6) | GCA_012275265.1_bMelUnd1.mat | 1,169,393,027 | 930 | 75.85M (7) | 16.11M (18) | 13146 | 2020-04-13 | SAMN12623090 | PRJNA561964 | Vertebrate Genomes Project | birds | |
| view | budgerigar | Melopsittacus undulatus (6) | GCA_012275275.1_bMelUnd1.pat | 1,124,753,724 | 330 | 99.20M (4) | 12.47M (24) | 13146 | 2020-04-13 | SAMN12623090 | PRJNA561963 | Vertebrate Genomes Project | birds | |
| view | budgerigar | Melopsittacus undulatus (6) | GCA_012275295.1_bMelUnd1.mat.Z | 1,171,635,651 | 865 | 104.09M (5) | 16.64M (19) | 13146 | 2020-04-13 | SAMN12623090 | PRJNA612327 | G10K | birds | |
| view | budgerigar | Melopsittacus undulatus (6) | GCF_012275295.1_bMelUnd1.mat.Z | 1,171,617,451 | 864 | 104.09M (5) | 16.64M (19) | 13146 | 2020-04-13 | SAMN12623090 | PRJNA612327 | G10K | birds | |
| view | budgerigar | Melopsittacus undulatus (6) | GCF_000238935.1_Melopsittacus_undulatus_6.3/melUnd1 | 1,117,373,619 | 25,212 | 10.61M (28) | 55.63K (5,477) | 13146 | 2012-01-02 | The Genome Institute, Washington University at St. Louis | birds | |||
| Collared flycatcher | Ficedula albicollis (3) | GCA_000247815.2_FicAlb1.5 | 1,118,343,587 | 21,428 | 6.54M (48) | 410.96K (771) | 59894 | 2013-06-27 | SAMN02981387 | PRJNA75089 | Uppsala University | birds | ||
| view | collared flycatcher | Ficedula albicollis (3) | GCF_000247815.1_FicAlb1.5 | 1,118,343,587 | 21,428 | 6.54M (48) | 410.96K (771) | 59894 | 2013-06-27 | SAMN02981387 | PRJNA75089 | Uppsala University | birds | |
| medium ground-finch | Geospiza fortis (2) | GCA_000277835.1_GeoFor_1.0 | 1,065,292,181 | 27,239 | 5.26M (54) | 30.52K (9,806) | 48883 | 2012-07-25 | SAMN00839579 | PRJNA156703 | Beijing Genomics Institute | birds | ||
| view | medium ground-finch | Geospiza fortis (2) | GCF_000277835.1_GeoFor_1.0/geoFor1 | 1,065,292,181 | 27,239 | 5.26M (54) | 30.52K (9,806) | 48883 | 2012-07-25 | SAMN00839579 | PRJNA156703 | Beijing Genomics Institute | birds | |
| Tibetan ground-tit | Pseudopodoces humilis (2) | GCA_000331425.1_PseHum1.0 | 1,042,980,823 | 5,405 | 16.34M (16) | 165.26K (1,794) | 181119 | 2013-01-11 | SAMN02981490 | PRJNA175930 | Beijing Genomics Institute (BGI)-Shenzhen | birds | ||
| view | Tibetan ground-tit | Pseudopodoces humilis (2) | GCF_000331425.1_PseHum1.0 | 1,042,997,632 | 5,406 | 16.34M (16) | 165.26K (1,794) | 181119 | 2013-01-11 | SAMN02981490 | PRJNA175930 | Beijing Genomics Institute (BGI)-Shenzhen | birds | |
| Puerto Rican parrot | Amazona vittata (2) | GCA_000332375.2_ASM33237v2 | 1,446,649,664 | 62,712 | 101.03K (3,056) | 29.31K (10,197) | CR | 241585 | 2020-08-28 | SAMN02981494 | PRJNA171587 | Puerto Rican Parrot Genome Project | birds | |
| Puerto Rican parrot | Amazona vittata (2) | GCA_000332375.1_AV1 | 1,175,404,042 | 182,974 | 19.24K (16,505) | 6.90K (47,687) | CR | 241585 | 2013-01-22 | Puerto Rican Parrot Genome Project | birds | |||
| rock pigeon | Columba livia (4) | GCA_000337935.2_Cliv_2.1 | 1,108,534,737 | 15,057 | 14.23M (17) | 26.63K (12,119) | 8932 | 2017-12-13 | SAMN02981415 | PRJNA167554 | BGI | birds | ||
| rock pigeon | Columba livia (4) | GCA_001887795.1_colLiv2 | 1,018,016,946 | 60 | 24.54M (11) | 27.71K (10,891) | 8932 | 2016-12-02 | SAMN02981415 | PRJNA347893 | Royal Veterinary College | birds | ||
| view | rock pigeon | Columba livia (4) | GCF_000337935.1_Cliv_1.0 | 1,107,989,085 | 14,923 | 3.15M (82) | 26.58K (12,141) | 8932 | 2013-02-11 | SAMN02981415 | PRJNA167554 | BGI | birds | |
| rock pigeon | Columba livia (4) | GCA_000337935.1_Cliv_1.0 | 1,107,971,856 | 14,922 | 3.15M (82) | 8932 | 2013-2-11 | BGI | birds | |||||
| peregrine falcon | Falco peregrinus (6) | GCA_000337955.1_F_peregrinus_v1.0 | 1,171,955,363 | 7,020 | 3.94M (90) | 28.64K (12,168) | 8954 | 2013-02-05 | SAMN02981425 | PRJNA159791 | BGI | birds | ||
| peregrine falcon | Falco peregrinus (6) | GCA_001887755.1_falPer2 | 1,112,064,469 | 34 | 26.78M (12) | 33.99K (9,833) | 8954 | 2016-12-02 | SAMN02981425 | PRJNA347893 | Royal Veterinary College | birds | ||
| peregrine falcon | Falco peregrinus (6) | GCA_012488915.1_Fperegrinus_1.0 | 1,183,345,687 | 26,817 | 194.74K (1,643) | 88.64K (3,608) | 8954 | 2020-04-08 | SAMD00156794 | PRJDB7811 | Environmental Genomics Office, Center for Enviromental Biology and Ecosystem Studies, National Institute for Environmental Studies | birds | ||
| view | peregrine falcon | Falco peregrinus (6) | GCF_000337955.1_F_peregrinus_v1.0 | 1,171,973,431 | 7,021 | 3.94M (90) | 28.64K (12,168) | 8954 | 2013-02-05 | SAMN02981425 | PRJNA159791 | BGI | birds | |
| Saker falcon | Falco cherrug (4) | GCA_000337975.1_F_cherrug_v1.0 | 1,174,811,715 | 5,863 | 4.15M (84) | 31.33K (10,949) | EN | 345164 | 2013-02-05 | SAMN02981426 | PRJNA168071 | BGI | birds | |
| view | Saker falcon | Falco cherrug (4) | GCF_000337975.1_F_cherrug_v1.0 | 1,174,811,715 | 5,863 | 4.15M (84) | 31.33K (10,949) | EN | 345164 | 2013-02-05 | SAMN02981426 | PRJNA168071 | BGI | birds |
| mallard | Anas platyrhynchos (11) | GCA_000355885.1_BGI_duck_1.0 | 1,105,035,747 | 78,487 | 1.23M (268) | 26.11K (11,206) | 8839 | 2013-04-26 | SAMN00011637 | PRJNA46621 | State Key Laboratory for Agrobiotechnology, China Agricultural University, Beijing | birds | ||
| mallard | Anas platyrhynchos (11) | GCA_002224895.1_ASM222489v1 | 1,265,073,014 | 18,550 | 2.49M (124) | 38.79K (7,760) | 8839 | 2017-07-25 | SAMN07337762 | PRJNA392350 | BGI | birds | ||
| mallard | Anas platyrhynchos (11) | GCA_003850225.1_IASCAAS_PekingDuck_PBH1.5 | 1,126,159,488 | 2,149 | 76.13M (5) | 36.81K (8,050) | 8839 | 2018-11-29 | SAMN10245527 | PRJNA496533 | Institute of Animal Sciences (IAS), Chinese Academy of Agricultural Sciences (CAAS) | birds | ||
| view | mallard | Anas platyrhynchos (11) | GCA_008746955.1_CAU_Wild1.0 | 1,211,992,756 | 1,665 | 77.63M (5) | 11.47M (33) | 8839 | 2019-10-07 | SAMN12287667 | PRJNA554956 | China Agricultural University | birds | |
| mallard | Anas platyrhynchos (11) | GCA_015476345.1_ZJU1.0 | 1,188,516,685 | 755 | 76.27M (5) | 5.68M (57) | 8839 | 2020-11-23 | SAMN15588841 | PRJNA636121 | Zhejiang University | birds | ||
| view | mallard | Anas platyrhynchos (11) | GCF_015476345.1_ZJU1.0 | 1,188,533,289 | 756 | 76.27M (5) | 5.68M (57) | 8839 | 2020-11-23 | SAMN15588841 | PRJNA636121 | Zhejiang University | birds | |
| white-throated sparrow | Zonotrichia albicollis (3) | GCA_000385455.1_Zonotrichia_albicollis-1.0.1 | 1,052,600,561 | 6,018 | 4.87M (52) | 112.75K (2,385) | 44394 | 2013-04-30 | SAMN02981528 | PRJNA197293 | White-throated sparrow consortium | birds | ||
| white-throated sparrow | Zonotrichia albicollis (3) | GCA_002850735.1_WTSP-SWSv1 | 1,017,281,565 | 110,046 | 32.86K (7,607) | 10.90K (23,825) | 44394 | 2018-01-03 | SAMN05726874 | PRJNA341682 | Georgia Institute of Technology | birds | ||
| view | white-throated sparrow | Zonotrichia albicollis (3) | GCF_000385455.1_Zonotrichia_albicollis-1.0.1 | 1,052,600,561 | 6,018 | 4.87M (52) | 112.75K (2,385) | 44394 | 2013-04-30 | SAMN02981528 | PRJNA197293 | White-throated sparrow consortium | birds | |
| Scarlet macaw | Ara macao (2) | GCA_000400545.1_SMACv1.0 | 1,035,921,044 | 282,947 | 6.37K (45,208) | 176014 | 2013-05-20 | SAMN02981465 | PRJNA175470 | Texas A&M University | birds | |||
| Scarlet macaw | Ara macao (2) | GCA_000400695.1_SMACv1.1 | 1,204,700,227 | 192,790 | 15.97K (21,024) | 4.40K (61,489) | 176014 | 2013-06-26 | SAMN03000706 | PRJNA189648 | Texas A&M University | birds | ||
| Japanese quail | Coturnix japonica (6) | GCA_000511605.2_Coja_2.0a | 898,141,602 | 9,499 | 3.85M (68) | 32.12K (7,398) | 93934 | 2016-06-29 | SAMD00009971 | PRJDB1146 | Tokyo University of Agriculture | birds | ||
| Japanese quail | Coturnix japonica (6) | GCA_001577835.2_Coturnix_japonica_2.1 | 927,640,260 | 2,011 | 2.98M (86) | 511.22K (515) | 93934 | 2016-03-01 | SAMN03989050 | PRJNA292031 | McDonnell Genome Institute - Washington University School of Medicine | birds | ||
| view | Japanese quail | Coturnix japonica (6) | GCF_001577835.2_Coturnix_japonica_2.1 | 927,656,957 | 2,012 | 2.98M (86) | 511.22K (515) | 93934 | 2016-03-01 | SAMN03989050 | PRJNA292031 | McDonnell Genome Institute - Washington University School of Medicine | birds | |
| Japanese quail | Coturnix japonica (6) | GCA_000511605.1_Coja_1.0 | 531,959,683 | 5,876 | 108.81K (1,435) | 93934 | 2013-7-26 | Tokyo University of Agriculture | birds | |||||
| Japanese quail | Coturnix japonica (6) | GCA_001577835.1_Coturnix_japonica_2.0 | 927,640,260 | 2,011 | 82.19M (4) | 93934 | 2016-3-1 | McDonnell Genome Institute - Washington University School of Medicine | birds | |||||
| view | Japanese quail | Coturnix japonica (6) | GCF_001577835.1_Coturnix_japonica_2.0 | 927,656,957 | 2,012 | 2.98M (86) | 511.22K (515) | 93934 | 2016-03-01 | McDonnell Genome Institute - Washington University School of Medicine | birds | |||
| Common canary | Serinus canaria (5) | GCA_000534875.1_SCA1 | 1,152,083,301 | 304,399 | 17.82M (13) | 53.88K (5,339) | 9135 | 2014-01-15 | SAMEA3138919 | PRJEB1766 | MPI MOLGEN | birds | ||
| Common canary | Serinus canaria (5) | GCA_007115625.1_cibio_Scana_2019 | 1,071,655,236 | 3,536 | 79.05M (5) | 90.87K (3,125) | 9135 | 2019-07-18 | SAMN12017177 | PRJNA548289 | CIBIO-InBIO | birds | ||
| view | Common canary | Serinus canaria (5) | GCF_007115625.1_cibio_Scana_2019 | 1,071,655,231 | 3,536 | 79.05M (5) | 90.87K (3,125) | 9135 | 2019-07-18 | SAMN12017177 | PRJNA548289 | CIBIO-InBIO | birds | |
| black grouse | Lyrurus tetrix tetrix | GCA_000586395.1_tetTet1 | 657,025,294 | 971,998 | 1.03K (189,939) | 162951 | 2014-03-08 | SAMN01814332 | PRJNA179551 | Uppsala University | birds | |||
| northern bobwhite | Colinus virginianus (5) | GCA_000599465.2_ASM59946v2 | 1,254,146,751 | 42,369 | 2.04M (150) | 56.07K (5,091) | 9014 | 2017-07-13 | SAMN02981558 | PRJNA188411 | Texas A&M University | birds | ||
| northern bobwhite | Colinus virginianus (5) | GCA_000599485.1_NB1.0 | 1,042,054,936 | 374,224 | 6.26K (44,287) | 6.03K (46,272) | 9014 | 2014-03-20 | SAMN02981558 | PRJNA188411 | Texas A&M University | birds | ||
| view | northern bobwhite | Colinus virginianus (5) | GCA_008692595.2_Cv_LA_2.0 | 948,540,911 | 6,035 | 66.83M (5) | 106.82K (2,337) | 9014 | 2021-04-29 | SAMN09044008 | PRJNA454855 | Louisiana State University | birds | |
| northern bobwhite | Colinus virginianus (5) | GCA_000599465.1_NB1.1 | 1,171,855,925 | 220,307 | 45.46K (6,889) | 9014 | 2014-3-20 | Texas A&M University | birds | |||||
| northern bobwhite | Colinus virginianus (5) | GCA_008692595.1_Cv_LA_1.0 | 866,267,420 | 1,512 | 66.81M (4) | 136.67K (1,855) | 9014 | 2019-10-07 | Louisiana State University | birds | ||||
| little egret | Egretta garzetta (2) | GCA_000687185.1_ASM68718v1 | 1,206,484,573 | 11,790 | 3.07M (113) | 29.02K (11,667) | 188379 | 2014-05-09 | SAMN02596466 | PRJNA232959 | College of Medicine and Forensics, Xi'an Jiaotong University | birds | ||
| view | little egret | Egretta garzetta (2) | GCF_000687185.1_ASM68718v1 | 1,206,501,934 | 11,791 | 3.07M (113) | 29.02K (11,667) | 188379 | 2014-05-09 | SAMN02596466 | PRJNA232959 | College of Medicine and Forensics, Xi'an Jiaotong University | birds | |
| Barn owl | Tyto alba (4) | GCA_000687205.1_ASM68720v1 | 1,120,143,088 | 62,122 | 52.82K (5,943) | 17.23K (18,680) | 56313 | 2014-05-08 | SAMN02339894 | PRJNA212909 | BGI | birds | ||
| Barn owl | Tyto alba (4) | GCA_018691265.1_T.alba_DEE_v4.0 | 1,249,867,532 | 70 | 36.03M (13) | 17.96M (24) | 56313 | 2021-06-03 | SAMN17526497 | PRJNA694551 | University of Lausanne | birds | ||
| view | Barn owl | Tyto alba (4) | GCF_018691265.1_T.alba_DEE_v4.0 | 1,249,867,532 | 70 | 36.03M (13) | 17.96M (24) | 56313 | 2021-06-03 | SAMN17526497 | PRJNA694551 | University of Lausanne | birds | |
| American flamingo | Phoenicopterus ruber ruber (3) | GCA_000687265.1_ASM68726v1 | 1,132,184,511 | 76,189 | 38.07K (8,592) | 20.26K (16,707) | 9218 | 2014-05-08 | SAMN02339890 | PRJNA212904 | BGI | birds | ||
| view | American flamingo | Phoenicopterus ruber ruber (3) | GCA_009819775.1_bPhoRub2.pri | 1,246,226,932 | 90 | 85.47M (5) | 14.70M (26) | 9218 | 2019-12-31 | SAMN12614931 | PRJNA561888 | Vertebrate Genomes Project | birds | |
| view | American flamingo | Phoenicopterus ruber ruber (3) | GCA_009819805.1_bPhoRub2.alt | 1,167,509,893 | 3,529 | 1.42M (244) | 9218 | 2019-12-23 | SAMN12614931 | PRJNA561889 | G10K | birds | ||
| White-tailed tropicbird | Phaethon lepturus (2) | GCA_000687285.1_ASM68728v1 | 1,152,958,507 | 66,785 | 47.90K (6,817) | 22.94K (14,707) | 97097 | 2014-05-08 | SAMN02339888 | PRJNA212902 | BGI | birds | ||
| view | White-tailed tropicbird | Phaethon lepturus (2) | GCF_000687285.1_ASM68728v1 | 1,152,958,507 | 66,785 | 47.90K (6,817) | 22.94K (14,707) | 97097 | 2014-05-08 | SAMN02339888 | PRJNA212902 | BGI | birds | |
| Dalmatian pelican | Pelecanus crispus (2) | GCA_000687375.1_ASM68737v1 | 1,160,924,693 | 63,982 | 43.36K (7,852) | 21.68K (16,160) | 36300 | 2014-05-09 | SAMN02339887 | PRJNA212901 | BGI | birds | ||
| view | Dalmatian pelican | Pelecanus crispus (2) | GCF_000687375.1_ASM68737v1 | 1,160,924,693 | 63,982 | 43.36K (7,852) | 21.68K (16,160) | 36300 | 2014-05-09 | SAMN02339887 | PRJNA212901 | BGI | birds | |
| Red-legged seriema | Cariama cristata (4) | GCA_000690535.1_ASM69053v1 | 1,132,245,425 | 53,474 | 55.20K (5,958) | 24.64K (13,705) | 54380 | 2014-05-12 | SAMN02318733 | PRJNA212889 | BGI | birds | ||
| view | Red-legged seriema | Cariama cristata (4) | GCA_009819485.1_bCarCri1.alt | 930,239,327 | 2,840 | 1.88M (130) | 1.88M (130) | 54380 | 2019-12-23 | SAMN12614807 | PRJNA561893 | Vertebrate Genomes Project | birds | |
| view | Red-legged seriema | Cariama cristata (4) | GCA_009819825.1_bCarCri1.pri | 1,215,245,693 | 110 | 30.18M (14) | 13.51M (28) | 54380 | 2019-12-31 | SAMN12614807 | PRJNA561892 | Vertebrate Genomes Project | birds | |
| view | Red-legged seriema | Cariama cristata (4) | GCF_000690535.1_ASM69053v1 | 1,132,245,425 | 53,474 | 55.20K (5,958) | 24.64K (13,705) | 54380 | 2014-05-12 | SAMN02318733 | PRJNA212889 | BGI | birds | |
| speckled mousebird | Colius striatus (2) | GCA_000690715.1_ASM69071v1 | 1,075,931,597 | 70,188 | 46.06K (6,512) | 25.86K (12,120) | 57412 | 2014-05-13 | SAMN02324230 | PRJNA212892 | BGI | birds | ||
| view | speckled mousebird | Colius striatus (2) | GCF_000690715.1_ASM69071v1 | 1,075,931,597 | 70,188 | 46.06K (6,512) | 25.86K (12,120) | 57412 | 2014-05-13 | SAMN02324230 | PRJNA212892 | BGI | birds | |
| sunbittern | Eurypyga helias (2) | GCA_000690775.1_ASM69077v1 | 1,088,019,637 | 62,699 | 47.24K (6,386) | 24.40K (12,843) | 54383 | 2014-05-13 | SAMN02324546 | PRJNA212893 | BGI | birds | ||
| view | sunbittern | Eurypyga helias (2) | GCF_000690775.1_ASM69077v1 | 1,088,019,637 | 62,699 | 47.24K (6,386) | 24.40K (12,843) | 54383 | 2014-05-13 | SAMN02324546 | PRJNA212893 | BGI | birds | |
| Northern fulmar | Fulmarus glacialis (2) | GCA_000690835.1_ASM69083v1 | 1,141,395,646 | 57,389 | 47.21K (7,016) | 25.93K (13,102) | 30455 | 2014-05-13 | SAMN02324803 | PRJNA212894 | BGI | birds | ||
| view | Northern fulmar | Fulmarus glacialis (2) | GCF_000690835.1_ASM69083v1 | 1,141,395,646 | 57,389 | 47.21K (7,016) | 25.93K (13,102) | 30455 | 2014-05-13 | SAMN02324803 | PRJNA212894 | BGI | birds | |
| red-throated loon | Gavia stellata (2) | GCA_000690875.1_ASM69087v1 | 1,129,677,294 | 61,830 | 45.53K (7,094) | 24.32K (13,686) | 37040 | 2014-05-13 | SAMN02324832 | PRJNA212895 | BGI | birds | ||
| view | red-throated loon | Gavia stellata (2) | GCF_000690875.1_ASM69087v1 | 1,129,694,867 | 61,831 | 45.52K (7,095) | 24.32K (13,686) | 37040 | 2014-05-13 | SAMN02324832 | PRJNA212895 | BGI | birds | |
| white-tailed eagle | Haliaeetus albicilla (4) | GCA_000691405.1_ASM69140v1 | 1,133,549,865 | 50,905 | 57.32K (5,758) | 25.14K (13,445) | 8969 | 2014-05-15 | SAMN02333670 | PRJNA212896 | BGI | birds | ||
| white-tailed eagle | Haliaeetus albicilla (4) | GCA_004320185.1_Haliaeetus_albicilla_ver1.0 | 1,196,539,455 | 35,313 | 120.76K (2,640) | 53.80K (6,146) | 8969 | 2019-02-16 | SAMD00156790 | PRJDB7806 | Environmental Genomics Office, Center for Enviromental Biology and Ecosystem Studies, National Institute for Environmental Studies | birds | ||
| white-tailed eagle | Haliaeetus albicilla (4) | GCA_013398555.1_ASM1339855v1 | 1,222,690,830 | 6,418 | 4.55M (78) | 134.90K (2,625) | 8969 | 2020-07-10 | SAMN12253999 | PRJNA545868 | B10K Consortium | birds | ||
| view | white-tailed eagle | Haliaeetus albicilla (4) | GCF_000691405.1_ASM69140v1 | 1,133,549,865 | 50,905 | 57.32K (5,758) | 25.14K (13,445) | 8969 | 2014-05-15 | SAMN02333670 | PRJNA212896 | BGI | birds | |
| cuckoo roller | Leptosomus discolor (2) | GCA_000691785.1_ASM69178v1 | 1,136,244,952 | 57,160 | 62.64K (5,157) | 24.73K (13,631) | 188344 | 2014-05-23 | SAMN02333687 | PRJNA212897 | BGI | birds | ||
| view | cuckoo roller | Leptosomus discolor (2) | GCF_000691785.1_ASM69178v1 | 1,136,244,952 | 57,160 | 62.64K (5,157) | 24.73K (13,631) | 188344 | 2014-05-23 | SAMN02333687 | PRJNA212897 | BGI | birds | |
| carmine bee-eater | Merops nubicus (4) | GCA_000691845.1_ASM69184v1 | 1,062,961,556 | 53,499 | 48.09K (6,132) | 24.68K (12,573) | 57421 | 2014-05-16 | SAMN02338310 | PRJNA212898 | BGI | birds | ||
| view | carmine bee-eater | Merops nubicus (4) | GCA_009819585.1_bMerNub1.alt | 1,122,486,764 | 3,296 | 1.97M (156) | 57421 | 2019-12-23 | SAMN12621035 | PRJNA561895 | Vertebrate Genomes Project | birds | ||
| view | carmine bee-eater | Merops nubicus (4) | GCA_009819595.1_bMerNub1.pri | 1,149,356,202 | 109 | 49.13M (9) | 12.37M (26) | 57421 | 2019-12-31 | SAMN12621035 | PRJNA561894 | Vertebrate Genomes Project | birds | |
| view | carmine bee-eater | Merops nubicus (4) | GCF_000691845.1_ASM69184v1 | 1,062,961,556 | 53,499 | 48.09K (6,132) | 24.68K (12,573) | 57421 | 2014-05-16 | SAMN02338310 | PRJNA212898 | BGI | birds | |
| American crow | Corvus brachyrhynchos (2) | GCA_000691975.1_ASM69197v1 | 1,091,312,783 | 10,547 | 6.95M (49) | 29.09K (10,509) | 85066 | 2014-06-02 | SAMN02297499 | PRJNA212869 | BGI | birds | ||
| view | American crow | Corvus brachyrhynchos (2) | GCF_000691975.1_ASM69197v1 | 1,091,312,783 | 10,547 | 6.95M (49) | 29.09K (10,509) | 85066 | 2014-06-02 | SAMN02297499 | PRJNA212869 | BGI | birds | |
| golden-collared manakin | Manacus vitellinus (9) | GCA_000692015.2_ASM69201v2 | 1,145,854,002 | 92,755 | 2.56M (124) | 43.70K (6,945) | 328815 | 2014-08-01 | SAMN02299332 | PRJNA212872 | BGI | birds | ||
| golden-collared manakin | Manacus vitellinus (9) | GCA_001715985.3_ASM171598v3 | 1,072,328,541 | 3,619 | 17.88M (16) | 290.58K (984) | 328815 | 2019-07-03 | SAMN02299332 | PRJNA335611 | Smithsonian Institution National Museum of Natural History | birds | ||
| view | golden-collared manakin | Manacus vitellinus (9) | GCF_001715985.3_ASM171598v3 | 1,072,328,541 | 3,619 | 17.88M (16) | 290.58K (984) | 328815 | 2019-07-03 | SAMN02299332 | PRJNA335611 | Smithsonian Institution National Museum of Natural History | birds | |
| golden-collared manakin | Manacus vitellinus (9) | GCA_001715985.1_ASM171598v1 | 1,213,420,527 | 15,315 | 16.64M (19) | 328815 | 2016-8-29 | Smithsonian Institution National Museum of Natural History | birds | |||||
| hoatzin | Opisthocomus hoazin (2) | GCA_000692075.1_ASM69207v1 | 1,203,712,246 | 10,256 | 2.94M (122) | 28.18K (11,760) | 30419 | 2014-05-19 | SAMN02302474 | PRJNA212873 | BGI | birds | ||
| view | hoatzin | Opisthocomus hoazin (2) | GCF_000692075.1_ASM69207v1 | 1,203,712,246 | 10,256 | 2.94M (122) | 28.18K (11,760) | 30419 | 2014-05-19 | SAMN02302474 | PRJNA212873 | BGI | birds | |
| Macqueen's bustard | Chlamydotis macqueenii (4) | GCA_000695195.1_ASM69519v1 | 1,086,566,339 | 59,693 | 45.22K (6,888) | 21.64K (14,968) | VU | 187382 | 2014-06-02 | SAMN02324157 | PRJNA212891 | BGI | birds | |
| Macqueen's bustard | Chlamydotis macqueenii (4) | GCA_011799995.1_REN_Cmacq_1.0 | 1,325,814,780 | 3,116 | 3.89M (110) | 60.94K (5,734) | VU | 187382 | 2020-03-31 | SAMN11607796 | PRJNA473697 | International Fund for Houbara Conservation | birds | |
| Macqueen's bustard | Chlamydotis macqueenii (4) | GCA_011800025.1_REN_Cmacq_2.0 | 1,206,946,485 | 5,856 | 3.05M (125) | 88.94K (3,811) | VU | 187382 | 2020-03-31 | SAMN11607797 | PRJNA473697 | International Fund for Houbara Conservation | birds | |
| view | Macqueen's bustard | Chlamydotis macqueenii (4) | GCF_000695195.1_ASM69519v1 | 1,086,566,339 | 59,693 | 45.22K (6,888) | 21.64K (14,968) | VU | 187382 | 2014-06-02 | SAMN02324157 | PRJNA212891 | BGI | birds |
| brown roatelo | Mesitornis unicolor (2) | GCA_000695765.1_ASM69576v1 | 1,087,290,853 | 67,520 | 47.10K (6,540) | 22.74K (14,204) | VU | 54374 | 2014-06-02 | SAMN02339298 | PRJNA212899 | BGI | birds | |
| view | brown roatelo | Mesitornis unicolor (2) | GCF_000695765.1_ASM69576v1 | 1,087,290,853 | 67,520 | 47.10K (6,540) | 22.74K (14,204) | VU | 54374 | 2014-06-02 | SAMN02339298 | PRJNA212899 | BGI | birds |
| rifleman | Acanthisitta chloris (4) | GCA_000695815.1_ASM69581v1 | 1,035,876,403 | 53,875 | 64.47K (4,486) | 20.60K (14,654) | 57068 | 2014-05-27 | SAMN02318032 | PRJNA212877 | BGI | birds | ||
| rifleman | Acanthisitta chloris (4) | GCA_016880875.1_bAcaChl1.alt | 827,793,803 | 2,879 | 1.75M (124) | 1.75M (124) | 57068 | 2021-02-10 | SAMN16442762 | PRJNA561955 | Vertebrate Genomes Project | birds | ||
| view | rifleman | Acanthisitta chloris (4) | GCA_016904835.1_bAcaChl1.pri | 1,077,387,582 | 206 | 40.83M (8) | 16.68M (17) | 57068 | 2021-02-17 | SAMN16442762 | PRJNA561954 | Vertebrate Genomes Project | birds | |
| view | rifleman | Acanthisitta chloris (4) | GCF_000695815.1_ASM69581v1 | 1,035,876,403 | 53,875 | 64.47K (4,486) | 20.60K (14,654) | 57068 | 2014-05-27 | SAMN02318032 | PRJNA212877 | BGI | birds | |
| golden eagle | Aquila chrysaetos canadensis (3) | GCA_000696035.1_AquilaChrysaetos1 | 1,548,476,395 | 42,881 | 1.75M (258) | 16.35K (21,098) | 216574 | 2014-05-30 | SAMN02371870 | PRJNA222866 | Purdue University | birds | ||
| view | golden eagle | Aquila chrysaetos canadensis (3) | GCA_000766835.1_Aquila_chrysaetos-1.0.2/aquChr2 | 1,192,725,744 | 1,141 | 9.23M (40) | 172.33K (2,004) | 216574 | 2014-10-14 | SAMN03079786 | PRJNA256103 | The Genome Institute - Washington University School of Medicine | birds | |
| Kea | Nestor notabilis (2) | GCA_000696875.1_ASM69687v1 | 1,053,559,886 | 42,180 | 61.48K (4,935) | 26.55K (11,852) | EN | 176057 | 2014-06-05 | SAMN02339299 | PRJNA212900 | BGI | birds | |
| view | Kea | Nestor notabilis (2) | GCF_000696875.1_ASM69687v1 | 1,053,559,886 | 42,180 | 61.48K (4,935) | 26.55K (11,852) | EN | 176057 | 2014-06-05 | SAMN02339299 | PRJNA212900 | BGI | birds |
| African ostrich | Struthio camelus australis (2) | GCA_000698965.1_ASM69896v1 | 1,225,025,301 | 6,914 | 3.59M (101) | 35.00K (10,064) | 441894 | 2014-06-06 | SAMN02316164 | PRJNA212875 | BGI | birds | ||
| view | African ostrich | Struthio camelus australis (2) | GCF_000698965.1_ASM69896v1 | 1,225,041,896 | 6,915 | 3.59M (101) | 35.00K (10,064) | 441894 | 2014-06-06 | SAMN02316164 | PRJNA212875 | BGI | birds | |
| Downy woodpecker | Dryobates pubescens (4) | GCA_000699005.1_ASM69900v1 | 1,167,323,935 | 31,254 | 2.09M (168) | 24.81K (12,352) | 118200 | 2014-06-06 | SAMN02314405 | PRJNA212874 | BGI | birds | ||
| Downy woodpecker | Dryobates pubescens (4) | GCA_014839825.1_bDryPub1.alt | 1,082,594,729 | 1,342 | 2.19M (110) | 2.19M (110) | 118200 | 2020-09-30 | SAMN12629497 | PRJNA561992 | Vertebrate Genomes Project | birds | ||
| view | Downy woodpecker | Dryobates pubescens (4) | GCA_014839835.1_bDryPub1.pri | 1,187,956,536 | 181 | 38.72M (11) | 19.15M (20) | 118200 | 2020-10-02 | SAMN12629497 | PRJNA561991 | Vertebrate Genomes Project | birds | |
| view | Downy woodpecker | Dryobates pubescens (4) | GCF_000699005.1_ASM69900v1 | 1,167,323,935 | 31,254 | 2.09M (168) | 24.81K (12,352) | 118200 | 2014-06-06 | SAMN02314405 | PRJNA212874 | BGI | birds | |
| Anna's hummingbird | Calypte anna (8) | GCA_000699085.1_ASM69908v1 | 1,105,676,412 | 54,736 | 4.05M (81) | 26.74K (11,601) | 9244 | 2014-06-06 | SAMN02265252 | PRJNA212866 | BGI | birds | ||
| Anna's hummingbird | Calypte anna (8) | GCA_002021895.1_Canna_diploid_1.0 | 2,021,121,536 | 5,971 | 2.05M (212) | 9244 | 2017-02-28 | SAMN02265252 | PRJNA368994 | Pacific Biosciences | birds | |||
| view | Anna's hummingbird | Calypte anna (8) | GCA_003957555.2_bCalAnn1_v1.p | 1,059,706,240 | 160 | 74.08M (4) | 14.52M (21) | 9244 | 2019-05-16 | SAMN02265252 | PRJNA489139 | Vertebrate Genomes Project | birds | |
| view | Anna's hummingbird | Calypte anna (8) | GCA_003957575.1_bCalAnn1_v1.h | 952,083,371 | 3,803 | 1.46M (168) | 1.46M (168) | 9244 | 2018-12-20 | SAMN02265252 | PRJNA489140 | Vertebrate Genomes Project | birds | |
| view | Anna's hummingbird | Calypte anna (8) | GCF_003957555.1_bCalAnn1_v1.p | 1,059,687,259 | 159 | 74.08M (4) | 14.52M (21) | 9244 | 2019-05-16 | SAMN02265252 | PRJNA489139 | Vertebrate Genomes Project | birds | |
| Adelie penguin | Pygoscelis adeliae (4) | GCA_000699105.1_ASM69910v1 | 1,216,600,033 | 19,264 | 5.12M (72) | 22.20K (15,871) | 9238 | 2014-06-06 | SAMN02596601 | PRJNA235983 | BGI | birds | ||
| Adelie penguin | Pygoscelis adeliae (4) | GCA_003264635.1_ASM326463v1 | 1,209,911,007 | 1,783 | 5.23M (71) | 22.34K (15,717) | 9238 | 2018-06-25 | SAMN06701103 | PRJNA382168 | Center for Bioinformatics and Integrative Biology | birds | ||
| Adelie penguin | Pygoscelis adeliae (4) | GCA_003264665.1_ASM326466v1 | 1,209,911,879 | 1,783 | 5.23M (71) | 22.34K (15,721) | 9238 | 2018-06-25 | SAMN06701102 | PRJNA382168 | Center for Bioinformatics and Integrative Biology | birds | ||
| view | Adelie penguin | Pygoscelis adeliae (4) | GCF_000699105.1_ASM69910v1 | 1,216,617,519 | 19,265 | 5.12M (72) | 22.20K (15,872) | 9238 | 2014-06-06 | SAMN02596601 | PRJNA235983 | BGI | birds | |
| emperor penguin | Aptenodytes forsteri (2) | GCA_000699145.1_ASM69914v1 | 1,254,347,440 | 10,672 | 5.07M (71) | 31.73K (11,116) | 9233 | 2014-06-06 | SAMN02596600 | PRJNA235982 | BGI | birds | ||
| view | emperor penguin | Aptenodytes forsteri (2) | GCF_000699145.1_ASM69914v1 | 1,254,347,440 | 10,672 | 5.07M (71) | 31.73K (11,116) | 9233 | 2014-06-06 | SAMN02596600 | PRJNA235982 | BGI | birds | |
| yellow-throated sandgrouse | Pterocles gutturalis (4) | GCA_000699245.1_ASM69924v1 | 1,069,324,295 | 58,607 | 49.53K (6,164) | 26.45K (12,048) | 240206 | 2014-06-09 | SAMN02339892 | PRJNA212906 | BGI | birds | ||
| view | yellow-throated sandgrouse | Pterocles gutturalis (4) | GCA_009769505.1_bPteGut1.alt | 1,037,717,354 | 1,958 | 1.15M (248) | 240206 | 2019-12-19 | SAMN12623217 | PRJNA561959 | Vertebrate Genomes Project | birds | ||
| view | yellow-throated sandgrouse | Pterocles gutturalis (4) | GCA_009769525.1_bPteGut1.pri | 1,127,422,757 | 89 | 43.26M (8) | 12.13M (37) | 240206 | 2019-12-23 | SAMN12623217 | PRJNA561958 | Vertebrate Genomes Project | birds | |
| view | yellow-throated sandgrouse | Pterocles gutturalis (4) | GCF_000699245.1_ASM69924v1 | 1,069,324,295 | 58,607 | 49.53K (6,164) | 26.45K (12,048) | 240206 | 2014-06-09 | SAMN02339892 | PRJNA212906 | BGI | birds | |
| great crested grebe | Podiceps cristatus | GCA_000699545.1_ASM69954v1 | 1,134,922,578 | 82,923 | 30.09K (11,042) | 17.41K (19,471) | 345573 | 2014-06-11 | SAMN02339891 | PRJNA212905 | BGI | birds | ||
| turkey vulture | Cathartes aura | GCA_000699945.1_ASM69994v1 | 1,152,571,117 | 104,141 | 36.36K (8,777) | 15.25K (20,795) | 43455 | 2014-06-11 | SAMN02319050 | PRJNA212890 | BGI | birds | ||
| view | chuck-will's-widow (BGI_N321 v2 2014) | Antrostomus carolinensis (4) | GCF_000700745.2_ASM70074v2 | 1,118,829,799 | 68,881 | 46.38K (6,753) | n/a | n/a | n/a | birds | ||||
| chuck-will's-widow | Antrostomus carolinensis (4) | GCA_000700745.1_ASM70074v1 | 1,119,683,066 | 70,122 | 46.34K (6,762) | 22.16K (14,874) | 279965 | 2014-06-10 | SAMN02318612 | PRJNA212888 | BGI | birds | ||
| view | chuck-will's-widow | Antrostomus carolinensis (4) | GCF_000700745.1_ASM70074v1 | 1,119,683,066 | 70,122 | 46.34K (6,762) | 22.16K (14,874) | 279965 | 2014-06-10 | SAMN02318612 | PRJNA212888 | BGI | birds | |
| bar-tailed trogon | Apaloderma vittatum (2) | GCA_000703405.1_ASM70340v1 | 1,070,836,417 | 54,728 | 56.67K (5,440) | 28.88K (10,934) | 57397 | 2014-06-16 | SAMN02318033 | PRJNA212878 | BGI | birds | ||
| view | bar-tailed trogon | Apaloderma vittatum (2) | GCF_000703405.1_ASM70340v1 | 1,070,836,417 | 54,728 | 56.67K (5,440) | 28.88K (10,934) | 57397 | 2014-06-16 | SAMN02318033 | PRJNA212878 | BGI | birds | |
| white-throated tinamou | Tinamus guttatus (3) | GCA_000705375.2_ASM70537v2 | 1,047,056,493 | 82,514 | 246.27K (1,147) | 29.77K (9,877) | 94827 | 2014-08-05 | SAMN02316659 | PRJNA212876 | BGI | birds | ||
| view | white-throated tinamou | Tinamus guttatus (3) | GCF_000705375.1_ASM70537v2 | 1,047,056,493 | 82,514 | 246.27K (1,147) | 29.77K (9,877) | 94827 | 2014-08-05 | SAMN02316659 | PRJNA212876 | BGI | birds | |
| killdeer | Charadrius vociferus (3) | GCA_000708025.2_ASM70802v2 | 1,219,859,583 | 15,167 | 3.66M (98) | 39.28K (8,892) | 50402 | 2014-08-05 | SAMN02296710 | PRJNA212867 | BGI | birds | ||
| view | killdeer | Charadrius vociferus (3) | GCF_000708025.1_ASM70802v2 | 1,219,859,583 | 15,167 | 3.66M (98) | 39.28K (8,892) | 50402 | 2014-08-05 | SAMN02296710 | PRJNA212867 | BGI | birds | |
| crested ibis | Nipponia nippon (2) | GCA_000708225.1_ASM70822v1 | 1,223,846,297 | 59,554 | 5.21M (66) | 29.12K (12,208) | EN | 128390 | 2014-06-16 | SAMN02596464 | PRJNA232572 | College of Medicine and Forensics, Xi'an Jiaotong University | birds | |
| view | crested ibis | Nipponia nippon (2) | GCF_000708225.1_ASM70822v1 | 1,223,863,029 | 59,555 | 5.21M (66) | 29.12K (12,208) | EN | 128390 | 2014-06-16 | SAMN02596464 | PRJNA232572 | College of Medicine and Forensics, Xi'an Jiaotong University | birds |
| great cormorant | Phalacrocorax carbo (2) | GCA_000708925.1_ASM70892v1 | 1,138,967,842 | 64,312 | 48.43K (6,715) | 17.34K (19,358) | 9209 | 2014-06-17 | SAMN02339889 | PRJNA212903 | BGI | birds | ||
| view | great cormorant | Phalacrocorax carbo (2) | GCF_000708925.1_ASM70892v1 | 1,138,967,842 | 64,312 | 48.43K (6,715) | 17.34K (19,358) | 9209 | 2014-06-17 | SAMN02339889 | PRJNA212903 | BGI | birds | |
| common cuckoo | Cuculus canorus (4) | GCA_000709325.1_ASM70932v1 | 1,153,894,225 | 14,930 | 2.99M (119) | 38.14K (8,811) | 55661 | 2014-06-17 | SAMN02298149 | PRJNA212870 | BGI | birds | ||
| common cuckoo | Cuculus canorus (4) | GCA_017976305.1_bCucCan1.alt | 1,063,845,602 | 1,004 | 3.66M (85) | 3.66M (85) | 55661 | 2021-04-15 | SAMN12629508 | PRJNA562016 | Vertebrate Genomes Project | birds | ||
| view | common cuckoo | Cuculus canorus (4) | GCA_017976375.1_bCucCan1.pri | 1,180,156,273 | 151 | 78.33M (5) | 20.80M (17) | 55661 | 2021-04-15 | SAMN12629508 | PRJNA562015 | Vertebrate Genomes Project | birds | |
| view | common cuckoo | Cuculus canorus (4) | GCF_000709325.1_ASM70932v1 | 1,153,894,225 | 14,930 | 2.99M (119) | 38.14K (8,811) | 55661 | 2014-06-17 | SAMN02298149 | PRJNA212870 | BGI | birds | |
| red-crested turaco | Tauraco erythrolophus (4) | GCA_000709365.1_ASM70936v1 | 1,155,540,733 | 59,587 | 56.33K (5,784) | 22.89K (14,965) | 121530 | 2014-06-25 | SAMN02339893 | PRJNA212908 | BGI | birds | ||
| view | red-crested turaco | Tauraco erythrolophus (4) | GCA_009764505.1_bTauEry1.alt | 1,084,112,861 | 3,476 | 1.23M (250) | 121530 | 2019-12-18 | SAMN12621036 | PRJNA561948 | Vertebrate Genomes Project | birds | ||
| view | red-crested turaco | Tauraco erythrolophus (4) | GCA_009769465.1_bTauEry1.pri | 1,252,271,553 | 140 | 85.56M (6) | 11.93M (29) | 121530 | 2019-12-19 | SAMN12621036 | PRJNA561947 | Vertebrate Genomes Project | birds | |
| view | red-crested turaco | Tauraco erythrolophus (4) | GCF_000709365.1_ASM70936v1 | 1,155,540,733 | 59,587 | 56.33K (5,784) | 22.89K (14,965) | 121530 | 2014-06-25 | SAMN02339893 | PRJNA212908 | BGI | birds | |
| East African grey crowned-crane | Balearica regulorum gibbericeps (4) | GCA_000709895.1_ASM70989v1 | 1,127,605,500 | 53,490 | 52.18K (6,181) | 23.33K (14,476) | EN | 100784 | 2014-06-25 | SAMN02318095 | PRJNA212879 | BGI | birds | |
| view | East African grey crowned-crane | Balearica regulorum gibbericeps (4) | GCA_011004865.1_bBalReg1.alt | 1,042,364,165 | 971 | 2.53M (127) | 2.53M (127) | EN | 100784 | 2020-02-24 | SAMN12615749 | PRJNA561891 | Vertebrate Genomes Project | birds |
| view | East African grey crowned-crane | Balearica regulorum gibbericeps (4) | GCA_011004875.1_bBalReg1.pri | 1,221,051,782 | 105 | 82.58M (5) | 23.33M (14) | EN | 100784 | 2020-03-05 | SAMN12615749 | PRJNA561890 | Vertebrate Genomes Project | birds |
| view | East African grey crowned-crane | Balearica regulorum gibbericeps (4) | GCF_000709895.1_ASM70989v1 | 1,127,622,302 | 53,491 | 52.18K (6,181) | 23.33K (14,477) | EN | 100784 | 2014-06-25 | SAMN02318095 | PRJNA212879 | BGI | birds |
| Rhinoceros hornbill | Buceros rhinoceros silvestris (2) | GCA_000710305.1_ASM71030v1 | 1,065,782,791 | 62,257 | 53.20K (5,769) | 14.59K (21,341) | VU | 175836 | 2014-06-25 | SAMN02318191 | PRJNA212887 | BGI | birds | |
| view | Rhinoceros hornbill | Buceros rhinoceros silvestris (2) | GCF_000710305.1_ASM71030v1 | 1,065,782,791 | 62,257 | 53.20K (5,769) | 14.59K (21,341) | VU | 175836 | 2014-06-25 | SAMN02318191 | PRJNA212887 | BGI | birds |
| bald eagle | Haliaeetus leucocephalus (2) | GCA_000737465.1_Haliaeetus_leucocephalus-4.0 | 1,178,409,481 | 1,023 | 9.15M (40) | 105.49K (3,144) | 52644 | 2014-08-04 | SAMN02664716 | PRJNA237821 | The Bald Eagle Consortium | birds | ||
| view | bald eagle | Haliaeetus leucocephalus (2) | GCF_000737465.1_Haliaeetus_leucocephalus-4.0 | 1,178,409,481 | 1,023 | 9.15M (40) | 105.49K (3,144) | 52644 | 2014-08-04 | SAMN02664716 | PRJNA237821 | The Bald Eagle Consortium | birds | |
| hooded crow | Corvus cornix cornix (11) | GCA_002023255.2_ASM202325v2 | 1,050,110,261 | 145 | 18.37M (18) | 8.91M (33) | 932674 | 2017-04-25 | SAMN02143031 | PRJNA358092 | Uppsala University, Evolutionary Biology Centre | birds | ||
| view | hooded crow | Corvus cornix cornix (11) | GCF_000738735.5_ASM73873v5 | 1,030,881,721 | 47 | 73.73M (5) | 8.55M (33) | 932674 | 2021-02-04 | SAMN02143031 | PRJNA192205 | Uppsala University | birds | |
| hooded crow | Corvus cornix cornix (11) | GCA_000738735.1_Hooded_Crow_genome | 1,049,964,851 | 1,299 | 16.36M (19) | 932674 | 2014-8-12 | Uppsala University | birds | |||||
| hooded crow | Corvus cornix cornix (11) | GCA_000738735.2_ASM73873v2 | 1,042,264,234 | 112 | 21.08M (14) | 97.33K (2,832) | 932674 | 2017-03-08 | Uppsala University | birds | ||||
| view | hooded crow | Corvus cornix cornix (11) | GCF_000738735.2_ASM73873v2 | 1,042,281,180 | 113 | 21.08M (14) | 97.33K (2,832) | 932674 | 2017-03-08 | Uppsala University | birds | |||
| view | chimney swift (M959 v1.1 2014) | Chaetura pelagica (4) | GCF_000747805.2_ChaPel_1.1 | 1,118,724,105 | 18,703 | 3.84M (78) | VU | n/a | n/a | n/a | birds | |||
| chimney swift | Chaetura pelagica (4) | GCA_000747805.1_ChaPel_1.0 | 1,119,188,094 | 19,072 | 3.84M (78) | 30.76K (10,349) | VU | 8897 | 2014-09-04 | SAMN03018471 | PRJNA210808 | BGI | birds | |
| view | chimney swift | Chaetura pelagica (4) | GCF_000747805.1_ChaPel_1.0 | 1,119,188,094 | 19,072 | 3.84M (78) | 30.76K (10,349) | VU | 8897 | 2014-09-04 | SAMN03018471 | PRJNA210808 | BGI | birds |
| Swan goose | Anser cygnoides domesticus (2) | GCA_000971095.1_AnsCyg_PRJNA183603_v1.0 | 1,119,134,887 | 7,592 | 5.20M (64) | 27.61K (11,638) | 381198 | 2015-04-08 | SAMN01830643 | PRJNA183603 | Anser cygnoides Genome consortium | birds | ||
| North Island brown kiwi | Apteryx mantelli mantelli (4) | GCA_001039765.2_AptMant0 | 1,595,295,449 | 326,828 | 3.96M (59) | 16.16K (23,947) | VU | 202946 | 2015-06-23 | SAMEA2560515 | PRJEB6383 | MPI-EVA | birds | |
| view | North Island brown kiwi | Apteryx mantelli mantelli (4) | GCF_001039765.1_AptMant0/aptMan1 | 1,523,972,539 | 24,720 | 5.68M (51) | 17.25K (21,820) | VU | 202946 | 2015-06-21 | SAMEA2560515 | PRJEB6383 | MPI-EVA | birds |
| North Island brown kiwi | Apteryx mantelli mantelli (4) | GCA_001039765.1_AptMant0 | 1,595,278,775 | 326,827 | 3.96M (59) | VU | 202946 | 2015-06-21 | MPI-EVA | birds | ||||
| silver-eye | Zosterops lateralis melanops | GCA_001281735.1_ASM128173v1 | 1,036,003,386 | 2,933 | 3.58M (83) | 34.51K (8,267) | 1220523 | 2015-09-14 | SAMN03389315 | PRJNA277310 | Imperial College London | birds | ||
| blue-fronted amazon | Amazona aestiva (2) | GCA_001420675.1_ASM142067v1 | 1,129,535,839 | 3,232 | 1.28M (255) | 26.17K (11,630) | 12930 | 2015-10-30 | SAMN04014659 | PRJNA294082 | LNCC | birds | ||
| blue-fronted amazon | Amazona aestiva (2) | GCA_017639355.1_Aaes_hic | 1,130,393,257 | 1,498 | 89.05M (5) | 26.17K (11,633) | 12930 | 2021-03-30 | SAMN17376699 | PRJNA679636 | University of Vienna | birds | ||
| ruff | Calidris pugnax (3) | GCA_001431845.1_ASM143184v1 | 1,229,094,286 | 3,753 | 10.06M (33) | 109.24K (3,054) | 198806 | 2015-11-04 | SAMN03491621 | PRJNA281024 | BGI | birds | ||
| ruff | Calidris pugnax (3) | GCA_001458055.1_ruff_EG1 | 1,173,203,933 | 47,740 | 868.21K (297) | 65.14K (4,579) | 198806 | 2015-11-06 | SAMEA3535133 | PRJEB11427 | ED | birds | ||
| view | ruff | Calidris pugnax (3) | GCF_001431845.1_ASM143184v1 | 1,229,094,286 | 3,753 | 10.06M (33) | 109.24K (3,054) | 198806 | 2015-11-04 | SAMN03491621 | PRJNA281024 | BGI | birds | |
| Common starling | Sturnus vulgaris (3) | GCA_001447265.1_Sturnus_vulgaris-1.0 | 1,036,755,994 | 2,361 | 3.42M (89) | 151.87K (1,828) | 9172 | 2015-11-20 | SAMN04029017 | PRJNA293892 | McDonnell Genome Institute - Washington University School of Medicine | birds | ||
| view | Common starling | Sturnus vulgaris (3) | GCF_001447265.1_Sturnus_vulgaris-1.0 | 1,036,755,994 | 2,361 | 3.42M (89) | 151.87K (1,828) | 9172 | 2015-11-20 | SAMN04029017 | PRJNA293892 | McDonnell Genome Institute - Washington University School of Medicine | birds | |
| Great Tit | Parus major (6) | GCA_001522545.3_Parus_major1.1 | 1,020,310,769 | 1,675 | 71.37M (5) | 148.69K (1,868) | 9157 | 2019-01-15 | SAMN03083587 | PRJNA208335 | Animal Breeding and Genomics Centre, Wageningen University | birds | ||
| view | Great Tit | Parus major (6) | GCF_001522545.3_Parus_major1.1 | 1,020,310,769 | 1,675 | 71.37M (5) | 148.69K (1,868) | 9157 | 2019-01-15 | SAMN03083587 | Animal Breeding and Genomics Centre, Wageningen University | birds | ||
| Great Tit | Parus major (6) | GCA_001522545.1_Parus_major1.0.3 | 1,020,292,357 | 1,675 | 71.37M (5) | 9157 | 2016-2-2 | Animal Breeding and Genomics Centre, Wageningen University | birds | |||||
| Great Tit | Parus major (6) | GCA_001522545.2_Parus_major1.1 | 1,020,310,768 | 1,675 | 71.37M (5) | 9157 | 2016-6-30 | Animal Breeding and Genomics Centre, Wageningen University | birds | |||||
| Great Tit | Parus major (6) | GCF_001522545.1_Parus_major1.0.3 | 1,020,309,133 | 1,676 | 71.37M (5) | 9157 | 2016-2-2 | Animal Breeding and Genomics Centre, Wageningen University | birds | |||||
| blue-crowned manakin | Lepidothrix coronata (2) | GCA_001604755.1_Lepidothrix_coronata-1.0 | 1,079,577,334 | 4,612 | 4.97M (70) | 141.85K (2,198) | 321398 | 2016-03-31 | SAMN04274560 | PRJNA300662 | McDonnell Genome Institute | birds | ||
| view | blue-crowned manakin | Lepidothrix coronata (2) | GCF_001604755.1_Lepidothrix_coronata-1.0 | 1,079,577,334 | 4,612 | 4.97M (70) | 141.85K (2,198) | 321398 | 2016-03-31 | SAMN04274560 | PRJNA300662 | McDonnell Genome Institute | birds | |
| greenish warbler | Phylloscopus trochiloides viridanus | GCA_001655095.1_GWvir1.0 | 1,003,330,590 | 158,605 | 20.63K (13,472) | 11.05K (25,657) | 144762 | 2016-06-02 | SAMN02646017 | PRJNA238808 | The University of British Columbia | birds | ||
| birds | Phylloscopus plumbeitarsus | GCA_001655115.1_GWplu1.0 | 997,399,373 | 308,480 | 7.45K (37,245) | 5.09K (54,736) | 56441 | 2016-06-02 | SAMN04545452 | PRJNA314915 | University of British Columbia | birds | ||
| greenish warbler | Phylloscopus trochiloides trochiloides | GCA_001655135.1_GWtro1.0 | 975,891,682 | 504,236 | 3.61K (75,293) | 2.94K (92,264) | 144761 | 2016-06-02 | SAMN04539782 | PRJNA314720 | University of British Columbia | birds | ||
| House sparrow | Passer domesticus | GCA_001700915.1_Passer_domesticus-1.0 | 1,042,720,703 | 2,301 | 6.37M (50) | 51.43K (5,263) | 48849 | 2016-08-31 | SAMN02929199 | PRJNA255814 | Sparrow Genome Consortium | birds | ||
| myrtle warbler | Setophaga coronata coronata (2) | GCA_001746935.2_mywa_2.1 | 1,022,651,334 | 2,109 | 71.39M (5) | 43.58K (5,943) | 1037456 | 2020-12-08 | SAMN05224218 | PRJNA325157 | Cornell University | birds | ||
| myrtle warbler | Setophaga coronata coronata (2) | GCA_001746935.1_mywagenomev1.1 | 1,171,929,618 | 154,686 | 5.52M (56) | 10.79K (24,335) | 1037456 | 2016-09-27 | Cornell University | birds | ||||
| view | greater prairie chicken | Tympanuchus cupido pinnatus | GCA_001870855.1_T_cupido_pinnatus_GPC_3440_v1 | 983,776,544 | 12,186 | 12.14M (23) | 47.48K (5,869) | 211916 | 2016-11-07 | SAMN05433571 | PRJNA330991 | Revive & Restore Heath Hen De-extinction Team | birds | |
| Oriental stork | Ciconia boyciana | GCA_002002965.1_Ciconia_boyciana_ver1.0 | 1,364,945,554 | 505,419 | 13.26K (26,183) | 11.01K (31,946) | EN | 52775 | 2017-02-09 | SAMD00050841 | PRJDB4709 | Laboratory of Ecogenetics, Environmental Biology Division, National Institute for Environmental Studies | birds | |
| Red-crowned crane | Grus japonensis | GCA_002002985.1_Grus_japonensis_ver1.0 | 1,265,634,512 | 357,545 | 8.61K (39,953) | 8.23K (42,052) | VU | 30415 | 2017-02-10 | SAMD00050840 | PRJDB4708 | Laboratory of Ecogenetics, Environmental Biology Division, National Institute for Environmental Studies | birds | |
| Okinawa rail | Hypotaenidia okinawae | GCA_002003005.1_Gallirallus_okinawae_ver1.0 | 1,114,530,436 | 768,680 | 6.25K (48,754) | EN | 547194 | 2017-02-09 | SAMD00050839 | PRJDB4707 | Laboratory of Ecogenetics, Environmental Biology Division, National Institute for Environmental Studies | birds | ||
| band-tailed pigeon | Patagioenas fasciata monilis | GCA_002029285.1_NIATT_ARIZONA | 1,089,149,042 | 9,784 | 19.99M (17) | 17.94K (16,931) | 372326 | 2017-03-15 | SAMN04386172 | PRJNA308039 | University of California, Santa Cruz | birds | ||
| helmeted guineafowl | Numida meleagris (4) | GCA_002078875.2_NumMel1.0 | 1,043,264,150 | 2,466 | 7.87M (41) | 234.93K (1,259) | 8996 | 2017-06-01 | SAMN05969731 | PRJNA352321 | INRA | birds | ||
| helmeted guineafowl | Numida meleagris (4) | GCA_014595935.1_HGFv1 | 1,049,889,730 | 1,127 | 98.08M (4) | 14.17M (23) | 8996 | 2020-09-21 | SAMN15246817 | PRJNA639701 | Kunming Institute of Zoology, Chinese Academy of Sciences | birds | ||
| view | helmeted guineafowl | Numida meleagris (4) | GCF_002078875.1_NumMel1.0 | 1,043,264,150 | 2,466 | 7.87M (41) | 234.93K (1,259) | 8996 | 2017-06-01 | SAMN05969731 | PRJNA352321 | INRA | birds | |
| helmeted guineafowl | Numida meleagris (4) | GCA_002078875.1_NumMel1.0 | 1,043,264,150 | 2,466 | 97.48M (4) | 8996 | 2017-4-5 | INRA | birds | |||||
| Swan goose | Anser cygnoides (3) | GCA_002166845.1_GooseV1.0 | 1,130,276,682 | 1,801 | 5.03M (71) | 35.04K (8,873) | 8845 | 2017-06-02 | SAMN02898389 | PRJNA253976 | Poultry Science Institute | birds | ||
| view | Swan goose | Anser cygnoides (3) | GCA_013030995.1_ASM1303099v1 | 1,113,895,350 | 2,119 | 33.12M (13) | 1.85M (151) | 8845 | 2020-05-11 | SAMN13281505 | PRJNA589208 | Poultry Science Institute | birds | |
| view | swan goose (Sichuan white goose 2017) | Anser cygnoides (3) | GCF_002166845.1_GooseV1.0 | 1,130,293,421 | 1,802 | 5.03M (71) | n/a | n/a | n/a | birds | ||||
| tawny-bellied seedeater | Sporophila hypoxantha | GCA_002167245.1_SpoHypox2.0 | 1,067,760,248 | 5,095 | 7.97M (31) | 1.04M (237) | 256693 | 2017-06-05 | SAMN06754710 | PRJNA382416 | Cornell University | birds | ||
| Pelagic cormorant | Phalacrocorax pelagicus | GCA_002173435.1_ASM217343v1 | 1,210,663,266 | 20,951 | 1.72M (195) | 67.73K (5,290) | 2723871 | 2017-06-06 | SAMN06832911 | PRJNA327123 | UCLA | birds | ||
| double-crested cormorant | Phalacrocorax auritus | GCA_002173455.1_ASM217345v1 | 1,246,050,644 | 27,523 | 1.99M (186) | 97.56K (3,720) | 56069 | 2017-06-06 | SAMN06226698 | PRJNA327123 | UCLA | birds | ||
| Galapagos flightless cormorant | Phalacrocorax harrisi | GCA_002173475.1_Pharrisi_ref_V1 | 1,202,994,831 | 2,651 | 4.65M (75) | 100.24K (3,591) | 473964 | 2017-06-06 | SAMN05301669 | PRJNA327123 | UCLA | birds | ||
| Neotropic cormorant | Phalacrocorax brasilianus | GCA_002174335.1_ASM217433v1 | 1,346,185,690 | 266,364 | 86.91K (3,071) | 35.20K (10,003) | 37046 | 2017-06-06 | SAMN06832916 | PRJNA327123 | UCLA | birds | ||
| Bengalese finch | Lonchura striata domestica (5) | GCA_002197715.1_LonStrDom1 | 1,060,169,204 | 3,015 | 2.95M (103) | 100.44K (2,867) | 299123 | 2017-06-19 | SAMN06283872 | PRJNA369279 | HHMI/UCSF | birds | ||
| Bengalese finch | Lonchura striata domestica (5) | GCA_005870125.1_lonStrDom2 | 1,060,269,806 | 2,015 | 71.98M (6) | 100.42K (2,867) | 299123 | 2019-06-05 | SAMN11521339 | PRJNA369279 | HHMI/UCSF | birds | ||
| view | Bengalese finch | Lonchura striata domestica (5) | GCF_005870125.1_lonStrDom2 | 1,060,269,806 | 2,015 | 71.98M (6) | 100.42K (2,867) | 299123 | 2019-06-05 | SAMN11521339 | PRJNA369279 | HHMI/UCSF | birds | |
| scaled quail | Callipepla squamata | GCA_002218305.1_ASM221830v1 | 1,045,281,893 | 34,302 | 1.04M (278) | 154.13K (1,950) | 9009 | 2017-07-13 | SAMN04255336 | PRJNA301734 | Texas A&M University | birds | ||
| Eastern spot-billed duck | Anas zonorhyncha | GCA_002224875.1_ASM222487v1 | 1,310,797,575 | 20,089 | 2.08M (152) | 33.50K (9,048) | 75864 | 2017-07-25 | SAMN07337763 | PRJNA392350 | BGI | birds | ||
| thick-billed guillemot | Uria lomvia | GCA_002289315.1_UriLom_1.1 | 1,179,358,714 | 9,327 | 15.85M (23) | 24.90K (12,843) | 28711 | 2017-09-11 | SAMN07414775 | PRJNA395774 | Cornell University | birds | ||
| Willow warbler | Phylloscopus trochilus acredula | GCA_002305835.1_ASM230583v1 | 1,066,518,484 | 5,995 | 3.25M (77) | 388.70K (690) | 209779 | 2016-06-08 | SAMN04881205 | PRJNA319295 | Lund University | birds | ||
| northern spotted owl | Strix occidentalis caurina (2) | GCA_002372975.2_StrOccCau_2.0 | 1,254,471,179 | 11,572 | 20.55M (16) | 172.29K (2,073) | 311401 | 2021-04-12 | SAMN05525316 | PRJNA338167 | California Academy of Sciences | birds | ||
| northern spotted owl | Strix occidentalis caurina (2) | GCA_002372975.1_Soccid_v01 | 1,255,541,132 | 8,108 | 3.98M (92) | 159.06K (2,233) | 311401 | 2017-09-26 | California Academy of Sciences | birds | ||||
| Pink-footed goose | Anser brachyrhynchus | GCA_002592135.1_ASM259213v1 | 1,116,992,394 | 2,723 | 4.97M (63) | 97.46K (3,034) | 132585 | 2017-10-19 | SAMN07629812 | PRJNA404647 | Aarhus University, Denmark | birds | ||
| peach-faced lovebird | Agapornis roseicollis | GCA_002631895.1_ASM263189v1 | 1,121,789,902 | 52,900 | 118.35K (2,644) | 28.59K (10,661) | 60468 | 2017-10-23 | SAMN06099614 | PRJNA355979 | North West University | birds | ||
| common mallard | Anas platyrhynchos platyrhynchos | GCA_002743455.1_CAU_duck1.0 | 1,136,415,614 | 21,240 | 74.99M (5) | 88.04K (3,342) | 8840 | 2017-11-03 | SAMN07569716 | PRJNA403935 | China Agricultural University | birds | ||
| bar-tailed godwit | Limosa lapponica baueri | GCA_002844005.1_Godwit_v1 | 1,034,771,378 | 32,319 | 283.01K (649) | 21.26K (8,762) | 1758121 | 2017-12-15 | SAMN05417616 | PRJNA321163 | Universidade Federal do Rio de Janeiro | birds | ||
| Javan myna | Acridotheres javanicus | GCA_002849675.1_ASM284967v1 | 1,051,582,182 | 4,312 | 5.54M (52) | 144.18K (1,824) | VU | 451385 | 2018-01-02 | SAMN07828064 | PRJNA415335 | National University of Singapore | birds | |
| Rose-ringed parakeet | Psittacula krameri | GCA_002870145.1_P.krameri1.0 | 1,417,809,960 | 167,560 | 1.19M (314) | 23.13K (15,383) | 9228 | 2018-01-09 | SAMN06459718 | PRJNA377329 | DICE | birds | ||
| blue tit | Cyanistes caeruleus (2) | GCA_002901205.1_cyaCae2 | 1,186,980,630 | 29,297 | 16.85M (22) | 105.78K (2,815) | 156563 | 2018-01-26 | SAMN03734925 | PRJNA284903 | Dr. Bernd Tmmermann, NGS core facility, MPI Molecular Genetics | birds | ||
| view | blue tit | Cyanistes caeruleus (2) | GCF_002901205.1_cyaCae2 | 1,186,980,630 | 29,297 | 16.85M (22) | 105.78K (2,815) | 156563 | 2018-01-26 | SAMN03734925 | PRJNA284903 | Dr. Bernd Tmmermann, NGS core facility, MPI Molecular Genetics | birds | |
| Chinese bamboo-partridge | Bambusicola thoracicus | GCA_002909625.1_Bthov1.0 | 1,032,295,167 | 163,748 | 13.16K (21,671) | 10.60K (27,381) | 9083 | 2018-01-31 | SAMN07428836 | PRJNA396570 | University of Florida | birds | ||
| willow flycatcher | Empidonax traillii (2) | GCA_003031625.1_ASM303162v1 | 1,123,485,537 | 7,791 | 895.07K (326) | 86.56K (3,503) | 164674 | 2018-04-03 | SAMN08663748 | PRJNA437496 | UCLA | birds | ||
| view | willow flycatcher | Empidonax traillii (2) | GCF_003031625.1_ASM303162v1 | 1,123,485,537 | 7,791 | 895.07K (326) | 86.56K (3,503) | 164674 | 2018-04-03 | SAMN08663748 | PRJNA437496 | UCLA | birds | |
| burrowing owl | Athene cunicularia (2) | GCA_003259725.1_athCun1 | 1,157,069,330 | 445 | 42.15M (6) | 64.09K (5,331) | 194338 | 2018-06-21 | SAMN08961563 | PRJNA431202 | Stefan Boerno's shared submissions | birds | ||
| view | burrowing owl | Athene cunicularia (2) | GCF_003259725.1_athCun1 | 1,157,069,330 | 445 | 42.15M (6) | 64.09K (5,331) | 194338 | 2018-06-21 | SAMN08961563 | PRJNA431202 | Stefan Boerno's shared submissions | birds | |
| Magellanic penguin | Spheniscus magellanicus (4) | GCA_003264535.1_ASM326453v1 | 1,209,851,208 | 1,783 | 5.23M (71) | 22.34K (15,722) | 37081 | 2018-06-25 | SAMN06701111 | PRJNA382168 | Center for Bioinformatics and Integrative Biology | birds | ||
| Magellanic penguin | Spheniscus magellanicus (4) | GCA_003264715.1_ASM326471v1 | 1,209,860,780 | 1,783 | 5.23M (71) | 22.34K (15,721) | 37081 | 2018-06-25 | SAMN06701112 | PRJNA382168 | Center for Bioinformatics and Integrative Biology | birds | ||
| Magellanic penguin | Spheniscus magellanicus (4) | GCA_003264755.1_ASM326475v1 | 1,209,860,343 | 1,783 | 5.23M (71) | 22.34K (15,721) | 37081 | 2018-06-25 | SAMN06701110 | PRJNA382168 | Center for Bioinformatics and Integrative Biology | birds | ||
| Magellanic penguin | Spheniscus magellanicus (4) | GCA_010076225.1_BGI_Smag.V1 | 1,260,229,131 | 13,422 | 12.68M (33) | 101.70K (3,606) | 37081 | 2020-01-31 | SAMN12384882 | PRJNA556735 | BGI-Shenzhen | birds | ||
| Humboldt's penguin | Spheniscus humboldti (4) | GCA_003264545.1_ASM326454v1 | 1,209,857,164 | 1,783 | 5.23M (71) | 22.34K (15,722) | VU | 9240 | 2018-06-25 | SAMN06701109 | PRJNA382168 | Center for Bioinformatics and Integrative Biology | birds | |
| Humboldt's penguin | Spheniscus humboldti (4) | GCA_003264735.1_ASM326473v1 | 1,209,849,151 | 1,783 | 5.23M (71) | 22.34K (15,720) | VU | 9240 | 2018-06-25 | SAMN06701108 | PRJNA382168 | Center for Bioinformatics and Integrative Biology | birds | |
| Humboldt's penguin | Spheniscus humboldti (4) | GCA_010076325.1_BGI_Shum.V1 | 1,239,252,862 | 11,265 | 6.23M (66) | 35.02K (10,607) | VU | 9240 | 2020-01-31 | SAMN12384883 | PRJNA556735 | BGI-Shenzhen | birds | |
| chinstrap penguin | Pygoscelis antarcticus (3) | GCA_003264555.1_ASM326455v1 | 1,209,850,003 | 1,783 | 5.23M (71) | 22.34K (15,721) | 79643 | 2018-06-25 | SAMN06701107 | PRJNA382168 | Center for Bioinformatics and Integrative Biology | birds | ||
| chinstrap penguin | Pygoscelis antarcticus (3) | GCA_003264595.1_ASM326459v1 | 1,209,830,009 | 1,783 | 5.23M (71) | 22.34K (15,719) | 79643 | 2018-06-25 | SAMN06701106 | PRJNA382168 | Center for Bioinformatics and Integrative Biology | birds | ||
| chinstrap penguin | Pygoscelis antarcticus (3) | GCA_010078415.1_BGI_Pant.V1 | 1,260,447,050 | 16,691 | 6.27M (57) | 136.95K (2,559) | 79643 | 2020-01-31 | SAMN12384868 | PRJNA556735 | BGI-Shenzhen | birds | ||
| Gentoo penguin | Pygoscelis papua (3) | GCA_003264615.1_ASM326461v1 | 1,209,909,388 | 1,783 | 5.23M (71) | 22.34K (15,722) | 30457 | 2018-06-25 | SAMN06701104 | PRJNA382168 | Center for Bioinformatics and Integrative Biology | birds | ||
| Gentoo penguin | Pygoscelis papua (3) | GCA_003264685.1_ASM326468v1 | 1,209,810,801 | 1,783 | 5.23M (71) | 22.34K (15,716) | 30457 | 2018-06-25 | SAMN06701105 | PRJNA382168 | Center for Bioinformatics and Integrative Biology | birds | ||
| Gentoo penguin | Pygoscelis papua (3) | GCA_010090195.1_BGI_Ppap.V1 | 1,306,937,499 | 18,750 | 2.79M (121) | 101.33K (3,543) | 30457 | 2020-01-31 | SAMN12384867 | PRJNA556735 | BGI-Shenzhen | birds | ||
| Galapagos penguin | Spheniscus mendiculus (2) | GCA_003264655.1_ASM326465v1 | 1,209,845,584 | 1,783 | 5.23M (71) | 22.34K (15,722) | EN | 156760 | 2018-06-25 | SAMN06701113 | PRJNA382168 | Center for Bioinformatics and Integrative Biology | birds | |
| Galapagos penguin | Spheniscus mendiculus (2) | GCA_010077915.1_BGI_Smen.V1 | 1,298,742,035 | 27,218 | 381.91K (961) | 81.91K (4,363) | EN | 156760 | 2020-01-31 | SAMN12384884 | PRJNA556735 | BGI-Shenzhen | birds | |
| Hawaii amakihi | Chlorodrepanis virens | GCA_003286495.1_ASM328649v1 | 1,086,507,881 | 19,546 | 69.78M (6) | 23.48K (12,609) | 64799 | 2018-07-02 | SAMN02854552 | PRJNA252695 | Smithsonian Institution NZP | birds | ||
| elegant crested-tinamou | Eudromia elegans (2) | GCA_003342815.1_eudEle1 | 955,514,612 | 2,364 | 3.26M (82) | 126.24K (2,183) | 8805 | 2018-07-26 | SAMN08476458 | PRJNA433110 | Harvard University | birds | ||
| elegant crested-tinamou | Eudromia elegans (2) | GCA_013398775.1_ASM1339877v1 | 958,920,152 | 2,568 | 6.28M (50) | 74.84K (3,550) | 8805 | 2020-07-10 | SAMN12253968 | PRJNA545868 | B10K Consortium | birds | ||
| view | lesser rhea | Rhea pennata | GCA_003342835.1_rhePen1 | 1,168,291,008 | 3,019 | 3.90M (87) | 68.14K (5,090) | 8795 | 2018-07-26 | SAMN08476461 | PRJNA433110 | Harvard University | birds | |
| birds | Nothoprocta perdicaria (2) | GCA_003342845.1_notPer1 | 965,904,370 | 2,217 | 3.37M (80) | 95.60K (2,872) | 30464 | 2018-07-26 | SAMN08476459 | PRJNA433110 | Harvard University | birds | ||
| view | birds | Nothoprocta perdicaria (2) | GCF_003342845.1_notPer1 | 965,904,370 | 2,217 | 3.37M (80) | 95.60K (2,872) | 30464 | 2018-07-26 | SAMN08476459 | PRJNA433110 | Harvard University | birds | |
| southern cassowary | Casuarius casuarius (2) | GCA_003342895.1_casCas1 | 1,209,001,349 | 3,184 | 3.70M (95) | 165.72K (2,025) | 8787 | 2018-07-26 | SAMN08476455 | PRJNA433110 | Harvard University | birds | ||
| southern cassowary | Casuarius casuarius (2) | GCA_013396415.1_ASM1339641v1 | 1,204,586,945 | 3,215 | 5.67M (66) | 88.59K (3,680) | 8787 | 2020-07-10 | SAMN12253744 | PRJNA545868 | B10K Consortium | birds | ||
| emu | Dromaius novaehollandiae (7) | GCA_003342905.1_droNov1 | 1,192,237,364 | 2,777 | 3.31M (112) | 172.13K (1,940) | 8790 | 2018-07-26 | SAMN08476457 | PRJNA433110 | Harvard University | birds | ||
| emu | Dromaius novaehollandiae (7) | GCA_013396795.1_ASM1339679v1 | 1,200,670,988 | 3,302 | 4.10M (78) | 86.98K (3,850) | 8790 | 2020-07-10 | SAMN12253764 | PRJNA545868 | B10K Consortium | birds | ||
| view | emu | Dromaius novaehollandiae (7) | GCA_016128335.1_ZJU1.0 | 1,247,468,792 | 802 | 82.72M (5) | 14.09M (26) | 8790 | 2020-12-20 | SAMN15183959 | PRJNA638233 | Zhejiang University | birds | |
| emu | Dromaius novaehollandiae (7) | GCA_020892015.1_emu_female_v2.2_1 | 1,300,616,635 | 283,460 | 29.99K (5,417) | 10.23K (21,858) | 8790 | 2021-11-03 | SAMD00230363 | PRJDB10282 | Tokyo Institute of Technology | birds | ||
| emu | Dromaius novaehollandiae (7) | GCA_020892035.1_emu_female_v2.2_2 | 1,292,560,855 | 283,460 | 29.23K (5,479) | 9.87K (21,701) | 8790 | 2021-11-03 | SAMD00230363 | PRJDB10283 | Tokyo Institute of Technology | birds | ||
| view | emu | Dromaius novaehollandiae (7) | GCF_003342905.1_droNov1 | 1,192,254,075 | 2,778 | 3.31M (112) | 172.13K (1,940) | 8790 | 2018-07-26 | SAMN08476457 | PRJNA433110 | Harvard University | birds | |
| birds | Crypturellus cinnamomeus | GCA_003342915.1_cryCin1 | 1,122,047,781 | 8,086 | 2.40M (129) | 60.62K (5,231) | 889801 | 2018-07-26 | SAMN08476456 | PRJNA433110 | Harvard University | birds | ||
| little spotted kiwi | Apteryx owenii | GCA_003342965.1_aptOwe1 | 1,231,276,503 | 5,096 | 1.62M (201) | 138.40K (2,492) | 8824 | 2018-07-26 | SAMN08476453 | PRJNA433110 | Harvard University | birds | ||
| Great spotted kiwi | Apteryx haastii | GCA_003342985.1_aptHaa1 | 1,221,441,152 | 4,183 | 1.37M (230) | 120.13K (2,900) | VU | 8823 | 2018-07-26 | SAMN08476452 | PRJNA433110 | Harvard University | birds | |
| view | greater rhea | Rhea americana | GCA_003343005.1_rheAme1 | 1,160,836,514 | 2,162 | 3.95M (78) | 88.76K (3,815) | 8797 | 2018-07-26 | SAMN08476460 | PRJNA433110 | Harvard University | birds | |
| Okarito brown kiwi | Apteryx rowi (2) | GCA_003343035.1_aptRow1 | 1,228,902,913 | 4,120 | 1.67M (181) | 129.38K (2,680) | VU | 308060 | 2018-07-26 | SAMN08476454 | PRJNA433110 | Harvard University | birds | |
| view | Okarito brown kiwi | Apteryx rowi (2) | GCF_003343035.1_aptRow1 | 1,228,902,913 | 4,120 | 1.67M (181) | 129.38K (2,680) | VU | 308060 | 2018-07-26 | SAMN08476454 | PRJNA433110 | Harvard University | birds |
| Houbara bustard | Chlamydotis undulata undulata (2) | GCA_003400225.2_REN_Cundu_1.1 | 1,167,170,754 | 9,902 | 3.27M (107) | 90.12K (3,713) | VU | 187383 | 2020-12-15 | SAMN09281226 | PRJNA473697 | International Fund for Houbara Conservation | birds | |
| Houbara bustard | Chlamydotis undulata undulata (2) | GCA_003400225.1_REN_Cundu_1.0 | 1,307,644,940 | 80,662 | 60.75K (2,794) | 42.50K (7,184) | VU | 187383 | 2018-08-16 | International Fund for Houbara Conservation | birds | |||
| hawaiian crow | Corvus hawaiiensis (4) | GCA_003402825.1_Coha_1.0 | 1,497,608,344 | 2,752 | 4.53M (79) | 134902 | 2018-08-16 | SAMN09383001 | PRJNA475267 | University of Hawaii | birds | |||
| hawaiian crow | Corvus hawaiiensis (4) | GCA_020740675.1_bCorHaw1.alt.cur | 628,844,469 | 2,762 | 584.43K (299) | 134902 | 2021-11-03 | SAMN22550278 | PRJNA774316 | Vertebrate Genomes Project | birds | |||
| view | hawaiian crow | Corvus hawaiiensis (4) | GCA_020740725.1_bCorHaw1.pri.cur | 1,151,594,481 | 187 | 76.28M (6) | 23.06M (15) | 134902 | 2021-11-04 | SAMN22550278 | PRJNA774314 | Vertebrate Genomes Project | birds | |
| view | Hawaiian crow (VGP 2021 refseq) | Corvus hawaiiensis (4) | GCF_020740725.1_bCorHaw1.pri.cur | 1,151,611,379 | 188 | 76.28M (6) | n/a | n/a | n/a | birds | ||||
| view | golden pheasant | Chrysolophus pictus | GCA_003413605.1_Chrysolophus_pictus_GenomeV1.0 | 1,023,990,748 | 14,294 | 1.56M (183) | 38.22K (7,891) | 9089 | 2018-08-20 | SAMN02980944 | PRJNA257945 | Inner Mongolia Agricultural University | birds | |
| eastern yellow robin | Eopsaltria australis | GCA_003426825.1_eyr_v1 | 1,228,344,903 | 20,702 | 987.28K (301) | 641.41K (435) | 44318 | 2018-08-23 | SAMN09425179 | PRJNA476023 | Deakin University | birds | ||
| Mikado pheasant | Syrmaticus mikado | GCA_003435085.1_NTU_Smik_1.2 | 1,066,426,119 | 71,281 | 11.32M (29) | 107.96K (2,831) | 9065 | 2018-08-31 | SAMN07211794 | PRJNA389983 | National Taiwan University | birds | ||
| Striped tit-babbler | Mixornis gularis | GCA_003546035.1_ASM354603v1 | 1,036,102,025 | 9,542 | 2.81M (99) | 71.55K (3,928) | 1948886 | 2018-09-11 | SAMN07281160 | PRJNA392017 | National University of Singapore | birds | ||
| Gouldian finch | Chloebia gouldiae | GCA_003676055.1_GouldianFinch | 1,070,785,140 | 18,372 | 17.13M (15) | 137.95K (2,090) | 44316 | 2018-10-23 | SAMN09689584 | PRJNA478907 | CIBIO/InBIO Research Center in Biodiversity and Genetic Resources | birds | ||
| Barn swallow | Hirundo rustica rustica | GCA_003692655.1_Chelidonia | 1,213,743,879 | 364 | 25.95M (12) | 6.12M (52) | 333673 | 2018-10-29 | SAMN09657529 | PRJNA481100 | University of Milan | birds | ||
| Spoon-billed sandpiper | Calidris pygmaea | GCA_003697955.1_ASM369795v1 | 1,178,367,144 | 29,819 | 3.14M (101) | 189.16K (1,695) | CR | 425635 | 2018-10-30 | SAMN09355691 | PRJNA419629 | Adam Mickiewicz University | birds | |
| red bird of paradise | Paradisaea rubra | GCA_003713215.1_ParRub_1.0 | 1,071,261,504 | 4,376 | 3.26M (91) | 415.33K (686) | 39963 | 2018-11-06 | SAMN10096786 | PRJNA491255 | University of Vienna | birds | ||
| Raggiana bird of paradise | Paradisaea raggiana | GCA_003713265.1_ParRag_1.0 | 1,037,508,133 | 6,544 | 882.04K (318) | 96.62K (2,969) | 36268 | 2018-11-06 | SAMN10096787 | PRJNA491255 | University of Vienna | birds | ||
| birds | Diphyllodes magnificus | GCA_003713285.1_DipMag_1.0 | 1,065,979,660 | 3,098 | 6.49M (49) | 241.64K (1,163) | 28716 | 2018-11-06 | SAMN10096783 | PRJNA491255 | University of Vienna | birds | ||
| Lawes's parotia | Parotia lawesii | GCA_003713295.1_ParLaw_1.0 | 1,056,922,331 | 3,976 | 3.07M (91) | 432.03K (662) | 39961 | 2018-11-06 | SAMN10096785 | PRJNA491255 | University of Vienna | birds | ||
| king bird of paradise | Cicinnurus regius | GCA_003713305.1_CicReg_1.0 | 1,059,540,104 | 4,390 | 3.19M (86) | 465.50K (613) | 36263 | 2018-11-06 | SAMN10096784 | PRJNA491255 | University of Vienna | birds | ||
| dark-eyed junco | Junco hyemalis (2) | GCA_003829775.1_ASM382977v1 | 958,315,288 | 4,457 | 71.32M (5) | 80.16K (3,083) | 40217 | 2018-11-26 | SAMN10120167 | PRJNA493001 | National Museum of Natural Sciences | birds | ||
| Wire-tailed manakin | Pipra filicauda (4) | GCA_003945595.2_ASM394559v2 | 1,081,944,082 | 1,768 | 2.59M (122) | 1.68M (172) | 649802 | 2020-12-01 | SAMN08774045 | PRJNA445296 | Smithsonian Institution | birds | ||
| view | Wire-tailed manakin | Pipra filicauda (4) | GCF_003945595.2_ASM394559v2 | 1,081,944,082 | 1,768 | 2.59M (122) | 1.68M (172) | 649802 | 2020-12-01 | SAMN08774045 | PRJNA445296 | Smithsonian Institution | birds | |
| Wire-tailed manakin | Pipra filicauda (4) | GCA_003945595.1_ASM394559v1 | 1,110,963,465 | 3,744 | 1.70M (189) | 1.59M (201) | 649802 | 2018-12-14 | Smithsonian Institution | birds | ||||
| view | Wire-tailed manakin | Pipra filicauda (4) | GCF_003945595.1_ASM394559v1 | 1,110,963,465 | 3,744 | 1.70M (189) | 1.59M (201) | 649802 | 2018-12-14 | Smithsonian Institution | birds | |||
| White-ruffed manakin | Corapipo altera (2) | GCA_003945725.1_ASM394572v1 | 1,095,745,976 | 9,068 | 12.39M (24) | 262.50K (1,171) | 415028 | 2018-12-14 | SAMN10424454 | PRJNA505529 | Smithsonian Institution | birds | ||
| view | White-ruffed manakin | Corapipo altera (2) | GCF_003945725.1_ASM394572v1 | 1,095,745,976 | 9,068 | 12.39M (24) | 262.50K (1,171) | 415028 | 2018-12-14 | SAMN10424454 | PRJNA505529 | Smithsonian Institution | birds | |
| yellow-billed parrot | Amazona collaria | GCA_003947215.1_ASM394721v1 | 1,258,720,284 | 10,638 | 13.27M (23) | 208.91K (1,647) | VU | 241587 | 2018-12-14 | SAMN10023852 | PRJNA490036 | Weill Cornell Medicine | birds | |
| saffron-crested tyrant-manakin | Neopelma chrysocephalum (2) | GCA_003984885.2_ASM398488v2 | 2,285,399,574 | 84,121 | 10.47M (52) | 237.43K (2,609) | 114329 | 2018-12-28 | SAMN08784363 | PRJNA445439 | Smithsonian Institution | birds | ||
| view | saffron-crested tyrant-manakin | Neopelma chrysocephalum (2) | GCF_003984885.1_ASM398488v2 | 1,142,796,179 | 42,063 | 10.52M (26) | 237.03K (1,315) | 114329 | 2018-12-28 | SAMN08784363 | PRJNA445439 | Smithsonian Institution | birds | |
| black-winged stilt | Himantopus leucocephalus | GCA_003993805.1_UO_Hhiman_2.0 | 1,116,806,074 | 1,442 | 99.46M (4) | 36.55K (8,416) | 507594 | 2019-01-04 | SAMN10386166 | PRJNA503940 | University of Otago | birds | ||
| view | Kakapo | n/a | GCA_004011185.1_bStrHab1_v1.h | 285,706,558 | 3,728 | 153.93K (460) | 153.93K (460) | 2489341 | 2019-01-10 | SAMN09948751 | PRJNA489134 | Vertebrate Genomes Project | birds | |
| Pied Avocet | Recurvirostra avosetta | GCA_004023745.1_ASM402374v1 | 1,193,282,475 | 35,873 | 96.78K (3,255) | 10.46K (31,993) | 171275 | 2019-01-15 | SAMN10518521 | PRJNA508229 | ConSERT | birds | ||
| view | Kakapo | Strigops habroptila (4) | GCA_004027225.2_bStrHab1.2.pri | 1,148,615,375 | 90 | 83.24M (6) | 9.45M (40) | CR | 2489341 | 2020-03-04 | SAMN09948751 | PRJNA489135 | Vertebrate Genomes Project | birds |
| view | Kakapo | Strigops habroptila (4) | GCF_004027225.2_bStrHab1.2.pri | 1,148,597,545 | 89 | 83.24M (6) | 9.45M (40) | CR | 2489341 | 2020-03-04 | SAMN09948751 | PRJNA489135 | Vertebrate Genomes Project | birds |
| Kakapo | Strigops habroptila (4) | GCA_004027225.1_bStrHab1_v1.p | 1,165,639,803 | 100 | 83.15M (6) | 9.45M (40) | CR | 2489341 | 2019-01-18 | Vertebrate Genomes Project | birds | |||
| view | Kakapo | Strigops habroptila (4) | GCF_004027225.1_bStrHab1_v1.p | 1,165,621,973 | 99 | 83.15M (6) | 9.45M (40) | CR | 2489341 | 2019-01-18 | Vertebrate Genomes Project | birds | ||
| Ring-necked pheasant | Phasianus colchicus (3) | GCA_004143745.1_ASM414374v1 | 1,017,507,340 | 39,677 | 10.68M (27) | 197.84K (1,390) | 9054 | 2019-02-06 | SAMN08888240 | PRJNA449162 | Shenzhen University | birds | ||
| Ring-necked pheasant | Phasianus colchicus (3) | GCA_015227605.1_ASM1522760v1 | 988,730,982 | 589 | 59.46M (5) | 1.33M (192) | 9054 | 2020-11-04 | SAMN12811331 | PRJNA380312 | Shanghai Jiao Tong University | birds | ||
| view | Ring-necked pheasant | Phasianus colchicus (3) | GCF_004143745.1_ASM414374v1 | 1,017,524,032 | 39,678 | 10.68M (27) | 197.84K (1,390) | 9054 | 2019-02-06 | SAMN08888240 | PRJNA449162 | Shenzhen University | birds | |
| Amami woodcock | Scolopax mira | GCA_004320125.1_Scolopax_mira_ver1.0 | 1,091,292,641 | 40,750 | 124.76K (2,305) | 61.19K (4,687) | VU | 1381582 | 2019-02-15 | SAMD00156786 | PRJDB7801 | Environmental Genomics Office, Center for Enviromental Biology and Ecosystem Studies, National Institute for Environmental Studies | birds | |
| Eurasian sparrowhawk | Accipiter nisus | GCA_004320145.1_Accipiter_nisus_ver1.0 | 1,190,649,881 | 44,975 | 91.24K (3,562) | 35.34K (8,985) | 211598 | 2019-02-16 | SAMD00156791 | PRJDB7807 | Environmental Genomics Office, Center for Enviromental Biology and Ecosystem Studies, National Institute for Environmental Studies | birds | ||
| Okinawa woodpecker | Dendrocopos noguchii | GCA_004320165.1_Dendrocopos_noguchii_ver1.0 | 1,134,561,427 | 154,720 | 20.20K (13,809) | 18.45K (15,031) | CR | 1517798 | 2019-02-16 | SAMD00156787 | PRJDB7802 | Environmental Genomics Office, Center for Enviromental Biology and Ecosystem Studies, National Institute for Environmental Studies | birds | |
| rock ptarmigan | Lagopus muta japonica | GCA_004320205.1_Lagopus_muta_japonica_ver1.0 | 1,002,559,668 | 62,806 | 63.29K (4,428) | 56.23K (4,968) | 1604048 | 2019-02-15 | SAMD00156785 | PRJDB7799 | Environmental Genomics Office, Center for Environmental Biology and Ecosystem Studies, National Institute for Environmental Studies | birds | ||
| Blakiston's fish-owl | Bubo blakistoni | GCA_004320225.1_Bubo_blakistoni_ver1.0 | 1,193,862,756 | 46,772 | 85.18K (3,810) | 65.05K (4,936) | EN | 1564486 | 2019-02-16 | SAMD00160568 | PRJDB7800 | Environmental Genomics Office, Center for Environmental Biology and Ecosystem Studies, National Institute for Environmental Studies | birds | |
| black-necked crane | Grus nigricollis | GCA_004360235.1_ASM436023v1 | 1,230,910,289 | 1,812 | 17.89M (22) | 17.89M (22) | 40817 | 2019-03-22 | SAMN11096029 | PRJNA523951 | Sichuan University | birds | ||
| Indian peafowl | Pavo cristatus (2) | GCA_005519975.1_AIIM_Pcri_1.0 | 1,027,510,962 | 179,332 | 190.30K (1,294) | 103.13K (2,360) | 9049 | 2019-05-20 | SAMN07739105 | PRJNA413288 | DEPARTMENT OF BIOCHEMISTRY, ALL INDIA INSTITUTE OF MEDICAL SCIENCES(AIIMS), NEW DELHI, INDIA | birds | ||
| Gunnison sage-grouse | Centrocercus minimus | GCA_005890655.1_Cmin_1.0 | 1,000,043,310 | 985 | 3.85M (81) | 3.50M (87) | EN | 211967 | 2019-06-14 | SAMN11266852 | PRJNA529426 | U.S. Geological Survey | birds | |
| Canada goose | Branta canadensis | GCA_006130075.1_GSC_cangoose_1.0 | 1,153,386,549 | 14,961 | 15.52M (21) | 220.85K (1,343) | 8853 | 2019-06-05 | SAMN11031539 | PRJNA524684 | Canada's Genomic Enterprise | birds | ||
| Bar-headed goose | Anser indicus | GCA_006229135.1_ASM622913v1 | 1,143,091,872 | 10,527 | 10.09M (35) | 120.38K (2,510) | 8846 | 2019-06-11 | SAMN11890447 | PRJNA542959 | State Key Laboratory of Plateau Ecology and Agriculture, Qinghai University | birds | ||
| little bush moa | Anomalopteryx didiformis (2) | GCA_006937325.1_anoDid_nucDNA_orig | 1,190,759,065 | 1,909 | 3.35M (111) | 824 (321,457) | 8811 | 2019-07-12 | SAMN08482543 | PRJNA433423 | Harvard University | birds | ||
| little bush moa | Anomalopteryx didiformis (2) | GCA_006938045.1_anoDid_nucDNA_mapDamage | 1,189,933,016 | 1,843 | 3.35M (111) | 774 (335,639) | 8811 | 2019-07-12 | SAMN08482543 | PRJNA534317 | Harvard University | birds | ||
| birds | Zosterops borbonicus | GCA_007252995.1_ZoBo_15179_v2.0 | 1,213,662,640 | 27,683 | 1.81M (172) | 20.90K (15,610) | 364589 | 2019-07-22 | SAMN11339519 | PRJNA530916 | University of Montpellier | birds | ||
| pale white-eye | Zosterops pallidus | GCA_007556475.1_ZoPa_MNHNZO2015-572_v1.0 | 1,149,599,252 | 63,344 | 379.82K (767) | 26.33K (12,115) | 43580 | 2019-07-26 | SAMN11339534 | PRJNA530916 | University of Montpellier | birds | ||
| Tree swallow | Tachycineta bicolor | GCA_007636935.1_CLO_TRES_1 | 1,135,351,544 | 92,151 | 34.26K (4,903) | 16.27K (15,730) | 72873 | 2019-07-30 | SAMN12236919 | PRJNA553513 | Cornell University | birds | ||
| Rusty pitohui | Pseudorectes ferrugineus | GCA_008033365.1_NUS_rp_v1 | 995,897,499 | 128,165 | 15.14K (17,664) | 10.77K (24,771) | 1743254 | 2019-08-20 | SAMN09908057 | PRJNA487682 | National University of Singapore | birds | ||
| helmeted honeyeater | Lichenostomus cassidix (2) | GCA_008360975.1_HeHo_1.0 | 1,102,302,466 | 1,912 | 7.97M (34) | 7.67M (35) | 1497555 | 2019-09-09 | Deakin University | birds | ||||
| view | razorbill | Alca torda (3) | GCA_008658355.1_bAlcTor1_alternate | 1,220,378,950 | 3,309 | 1.95M (188) | 28689 | 2019-09-23 | SAMN12292087 | PRJNA554521 | G10K | birds | ||
| view | razorbill | Alca torda (3) | GCA_008658365.1_bAlcTor1_primary | 1,178,492,568 | 95 | 84.53M (4) | 18.22M (23) | 28689 | 2019-10-10 | SAMN12292087 | PRJNA554520 | G10K | birds | |
| razorbill | Alca torda (3) | GCA_013398245.1_ASM1339824v1 | 1,162,045,472 | 39,768 | 240.91K (1,278) | 48.98K (6,645) | 28689 | 2020-07-10 | SAMN12253979 | PRJNA545868 | B10K Consortium | birds | ||
| rufous-capped babbler | Cyanoderma ruficeps | GCA_008694505.1_ASM869450v1 | 1,041,446,934 | 7,756 | 15.64M (16) | 194.31K (1,480) | 181631 | 2019-09-25 | SAMN12816971 | PRJNA573563 | Academia Sinica | birds | ||
| Kentish plover | Charadrius alexandrinus | GCA_008711295.1_ASM871129v1 | 1,231,940,710 | 17,135 | 3.29M (105) | 129.79K (2,650) | 50392 | 2019-09-27 | SAMN12714389 | PRJNA564483 | Sun Yat-sen University | birds | ||
| Eurasian thick-knee | Burhinus oedicnemus | GCA_008921705.1_REN_Boedic_1.0 | 1,228,108,199 | 9,229 | 1.94M (184) | 93.68K (3,668) | 85105 | 2019-10-08 | SAMN11554498 | PRJNA473697 | International Fund for Houbara Conservation | birds | ||
| domestic type | Cairina moschata domestica | GCA_009194515.1_CaiMos1.0 | 1,109,217,119 | 2,942 | 2.42M (119) | 89.13K (3,170) | 1240228 | 2019-11-25 | SAMN08035743 | PRJNA417448 | McDonnell Genome Institute - Washington University School of Medicine | birds | ||
| Regent honeyeater | Anthochaera phrygia | GCA_009430485.1_ANU_Anthochaera_phrygia_1.0 | 815,187,911 | 265,121 | 4.48K (52,563) | 944 (224,144) | CR | 2020318 | 2019-10-31 | SAMN12070213 | PRJNA549051 | The Australian National University | birds | |
| New Caledonian crow | Corvus moneduloides (5) | GCA_009650515.1_UO_Cmon_1.0 | 1,056,558,033 | 2,996 | 4.46M (65) | 331.40K (905) | 1196302 | 2019-11-12 | SAMN12418287 | PRJNA557728 | University of Otago | birds | ||
| New Caledonian crow | Corvus moneduloides (5) | GCA_009650955.1_bCorMon1.pri | 1,112,750,989 | 106 | 74.70M (5) | 11.52M (30) | 1196302 | 2019-11-14 | SAMN12368441 | PRJNA560983 | Vertebrate Genomes Project | birds | ||
| view | New Caledonian crow | Corvus moneduloides (5) | GCA_009651025.1_bCorMon1.alt | 905,198,257 | 894 | 2.56M (105) | 1196302 | 2019-11-12 | SAMN12368441 | PRJNA560982 | Vertebrate Genomes Project | birds | ||
| New Caledonian crow | Corvus moneduloides (5) | GCA_013398675.1_ASM1339867v1 | 1,056,525,328 | 2,993 | 4.46M (65) | 331.40K (905) | 1196302 | 2020-07-10 | SAMN12254009 | PRJNA545868 | B10K Consortium | birds | ||
| view | New Caledonian crow | Corvus moneduloides (5) | GCF_009650955.1_bCorMon1.pri | 1,112,734,094 | 105 | 74.70M (5) | 11.52M (30) | 1196302 | 2019-11-14 | SAMN12368441 | PRJNA560983 | Vertebrate Genomes Project | birds | |
| Akiapolaau | Hemignathus wilsoni | GCA_009690805.1_HemiWil1.0 | 1,032,496,179 | 9,903 | 3.34M (85) | 69.85K (4,163) | EN | 2518271 | 2019-11-22 | SAMN10867508 | PRJNA520783 | Smithsonian Institution | birds | |
| Superb fairywren | Malurus cyaneus samueli | GCA_009741485.1_mCya_1.0 | 1,078,891,882 | 4,330 | 68.11M (6) | 210.41K (1,313) | 2593467 | 2019-12-12 | SAMN12217597 | PRJNA553115 | Australian National University | birds | ||
| view | common yellowthroat | Geothlypis trichas (2) | GCA_009764545.1_bGeoTri1.alt | 976,433,058 | 4,976 | 1.05M (235) | 1.05M (235) | 135433 | 2019-12-18 | SAMN12631222 | PRJNA589704 | G10K | birds | |
| view | common yellowthroat | Geothlypis trichas (2) | GCA_009764595.1_bGeoTri1.pri | 1,078,128,490 | 278 | 72.54M (6) | 3.25M (82) | 135433 | 2019-12-19 | SAMN12631222 | PRJNA589703 | G10K | birds | |
| view | mute swan | Cygnus olor (5) | GCA_009769485.1_bCygOlo1.alt | 814,162,536 | 5,613 | 328.71K (693) | 328.71K (693) | 8869 | 2019-12-19 | Vertebrate Genomes Project | birds | |||
| mute swan | Cygnus olor (5) | GCA_009769485.2_bCygOlo1.alt.v2 | 814,594,871 | 5,626 | 327.09K (694) | 327.09K (694) | 8869 | 2021-03-30 | SAMN12621369 | PRJNA561961 | Vertebrate Genomes Project | birds | ||
| mute swan | Cygnus olor (5) | GCA_009769625.2_bCygOlo1.pri.v2 | 1,134,186,636 | 171 | 81.48M (4) | 8.31M (39) | 8869 | 2021-03-31 | SAMN12621369 | PRJNA561960 | Vertebrate Genomes Project | birds | ||
| view | mute swan | Cygnus olor (5) | GCF_009769625.2_bCygOlo1.pri.v2 | 1,134,186,642 | 171 | 81.48M (4) | 8.31M (39) | 8869 | 2021-03-31 | SAMN12621369 | PRJNA561960 | Vertebrate Genomes Project | birds | |
| view | mute swan | Cygnus olor (5) | GCA_009769625.1_bCygOlo1.pri | 1,135,009,278 | 181 | 81.04M (4) | 7.74M (41) | 8869 | 2019-12-23 | Vertebrate Genomes Project | birds | |||
| view | Abyssinian ground-hornbill | Bucorvus abyssinicus (3) | GCA_009769595.1_bBucAby1.alt | 1,024,138,499 | 3,527 | 954.95K (304) | VU | 153643 | 2019-12-19 | SAMN12614799 | PRJNA561886 | Vertebrate Genomes Project | birds | |
| view | Abyssinian ground-hornbill | Bucorvus abyssinicus (3) | GCA_009769605.1_bBucAby1.pri | 1,132,597,561 | 112 | 40.27M (9) | 12.04M (29) | VU | 153643 | 2019-12-23 | SAMN12614799 | PRJNA561887 | Vertebrate Genomes Project | birds |
| Abyssinian ground-hornbill | Bucorvus abyssinicus (3) | GCA_013398885.1_ASM1339888v1 | 1,102,577,438 | 13,415 | 1.08M (262) | 163.89K (1,888) | VU | 153643 | 2020-07-10 | SAMN12253919 | PRJNA545868 | B10K Consortium | birds | |
| horned lark | Eremophila alpestris peregrina | GCA_009792885.1_CLO_EAlp_1.0 | 1,041,035,471 | 2,714 | 9.42M (30) | 193.82K (1,429) | 2668079 | 2019-12-23 | SAMN12913182 | PRJNA575884 | Cornell University | birds | ||
| birds | Tetrax tetrax | GCA_009806455.1_REN_Tetrax_1.0 | 1,259,185,357 | 18,031 | 389.68K (1,005) | 43.43K (7,505) | 172684 | 2019-12-27 | SAMN11607794 | PRJNA473697 | International Fund for Houbara Conservation | birds | ||
| eastern bluebird | Sialia sialis | GCA_009812075.1_Ss_LA_1.0 | 958,522,825 | 2,785 | 32.31M (9) | 53.98K (4,781) | 172413 | 2019-12-31 | SAMN12412825 | PRJNA557459 | Louisiana State University | birds | ||
| view | Swainson's thrush | Catharus ustulatus (6) | GCA_009819505.1_bCatUst1.alt | 1,128,658,440 | 3,601 | 1.50M (210) | 1.50M (210) | 91951 | 2019-12-23 | Vertebrate Genomes Project | birds | |||
| Swainson's thrush | Catharus ustulatus (6) | GCA_009819505.2_bCatUst1.alt.v2 | 1,128,658,440 | 3,601 | 1.50M (210) | 1.50M (210) | 91951 | 2020-11-05 | SAMN12618602 | PRJNA561934 | Vertebrate Genomes Project | birds | ||
| Swainson's thrush | Catharus ustulatus (6) | GCA_009819885.2_bCatUst1.pri.v2 | 1,131,635,256 | 161 | 68.46M (6) | 4.91M (70) | 91951 | 2020-12-22 | SAMN12618602 | PRJNA561933 | Vertebrate Genomes Project | birds | ||
| view | Swainson's thrush | Catharus ustulatus (6) | GCF_009819885.2_bCatUst1.pri.v2 | 1,131,616,530 | 160 | 68.46M (6) | 4.91M (70) | 91951 | 2020-12-22 | SAMN12618602 | PRJNA561933 | Vertebrate Genomes Project | birds | |
| Swainson's thrush | Catharus ustulatus (6) | GCA_009819885.1_bCatUst1.pri | 1,131,635,156 | 162 | 63.53M (6) | 4.91M (70) | 91951 | 2019-12-31 | Vertebrate Genomes Project | birds | ||||
| view | Common tern | Sterna hirundo (2) | GCA_009819605.1_bSteHir1.pri | 1,229,972,541 | 123 | 85.49M (5) | 22.00M (18) | 108405 | 2019-12-31 | SAMN12369541 | PRJNA558062 | Vertebrate Genomes Project | birds | |
| view | Common tern | Sterna hirundo (2) | GCA_009819645.1_bSteHir1.alt | 1,175,438,911 | 2,235 | 5.65M (63) | 108405 | 2019-12-23 | SAMN12369541 | PRJNA558063 | Vertebrate Genomes Project | birds | ||
| view | blackcap | Sylvia atricapilla (3) | GCA_009819655.1_bSylAtr1.pri | 1,066,786,587 | 189 | 72.98M (5) | 7.35M (40) | 48155 | 2019-12-31 | SAMN12369542 | PRJNA558064 | Vertebrate Genomes Project | birds | |
| view | blackcap | Sylvia atricapilla (3) | GCA_009819715.1_bSylAtr1.alt | 991,486,332 | 3,566 | 1.55M (180) | 1.55M (180) | 48155 | 2019-12-23 | SAMN12369542 | PRJNA558065 | Vertebrate Genomes Project | birds | |
| blackcap | Sylvia atricapilla (3) | GCA_013398435.1_ASM1339843v1 | 1,017,094,937 | 123 | 16.01M (18) | 57.17K (5,107) | 48155 | 2020-07-10 | SAMN12253985 | PRJNA545868 | B10K Consortium | birds | ||
| tufted duck | Aythya fuligula (3) | GCA_009819795.1_bAytFul2.pri | 1,126,988,109 | 104 | 85.91M (4) | 17.82M (19) | 219594 | 2019-12-31 | SAMN12621346 | PRJNA561952 | Vertebrate Genomes Project | birds | ||
| view | tufted duck | Aythya fuligula (3) | GCA_009819845.1_bAytFul2.alt | 1,013,629,683 | 780 | 4.45M (68) | 4.45M (68) | 219594 | 2019-12-23 | SAMN12621346 | PRJNA561953 | Vertebrate Genomes Project | birds | |
| view | tufted duck | Aythya fuligula (3) | GCF_009819795.1_bAytFul2.pri | 1,127,004,725 | 105 | 85.91M (4) | 17.82M (19) | 219594 | 2019-12-31 | SAMN12621346 | PRJNA561952 | Vertebrate Genomes Project | birds | |
| cockatiel | Nymphicus hollandicus | GCA_009823435.1_ASM982343v1 | 1,205,077,083 | 279,754 | 3.63M (8) | 39.00K (5,477) | 13180 | 2019-12-31 | SAMN09580626 | PRJNA479577 | IRIDIAN GENOMES | birds | ||
| lance-tailed manakin | Chiroxiphia lanceolata (3) | GCA_009829145.1_bChiLan1.pri | 1,089,631,598 | 93 | 75.61M (5) | 18.50M (17) | 296741 | 2020-01-03 | SAMN12620979 | PRJNA561943 | Vertebrate Genomes Project | birds | ||
| view | lance-tailed manakin | Chiroxiphia lanceolata (3) | GCA_009829205.1_bChiLan1.alt | 1,054,616,617 | 4,269 | 1.09M (270) | 296741 | 2020-01-03 | SAMN12620979 | PRJNA561944 | Vertebrate Genomes Project | birds | ||
| view | lance-tailed manakin | Chiroxiphia lanceolata (3) | GCF_009829145.1_bChiLan1.pri | 1,089,631,598 | 93 | 75.61M (5) | 18.50M (17) | 296741 | 2020-01-03 | SAMN12620979 | PRJNA561943 | Vertebrate Genomes Project | birds | |
| sun parakeet | Aratinga solstitialis (2) | GCA_009867195.1_ASM986719v1 | 1,214,690,015 | 110,801 | 22.02M (4) | 82.30K (1,603) | EN | 176015 | 2020-01-14 | SAMN06181670 | PRJNA358718 | IRIDIAN GENOMES | birds | |
| sun parakeet | Aratinga solstitialis (2) | GCA_902168055.1_ARATINGA-SOLSTITIALIS-ASSEMBLY-PRJEB33153 | 1,169,445,099 | 1,570 | 16.98M (16) | 236.23K (1,387) | EN | 176015 | 2019-11-14 | SAMEA5743801 | PRJEB33153 | INSTITUT DE BIOLOGIA EVOLUTIVA (CSIC-UPF) | birds | |
| birds | Aratinga weddellii | GCA_009867205.1_ASM986720v1 | 1,114,053,963 | 65,557 | 9.08M (7) | 124.59K (1,511) | 190661 | 2020-01-14 | SAMN09681954 | PRJNA481535 | IRIDIAN GENOMES | birds | ||
| grey parrot | Psittacus erithacus | GCA_009867235.1_ASM986723v1 | 1,118,034,822 | 49,377 | 6.80M (13) | 175.67K (1,116) | EN | 57247 | 2020-01-14 | SAMN12165726 | PRJNA551771 | IRIDIAN GENOMES | birds | |
| Timneh parrot | Psittacus timneh | GCA_009867315.1_ASM986731v1 | 1,103,923,287 | 73,334 | 13.65M (4) | 239.76K (773) | EN | 1549196 | 2020-01-14 | SAMN12165721 | PRJNA547942 | IRIDIAN GENOMES | birds | |
| hyacinth macaw | Anodorhynchus hyacinthinus | GCA_009936445.1_ASM993644v1 | 1,119,461,287 | 73,334 | 3.23M (9) | 88.94K (807) | VU | 51900 | 2020-01-27 | SAMN09689126 | PRJNA481562 | IRIDIAN GENOMES | birds | |
| red-and-green macaw | Ara chloropterus | GCA_010014725.1_ASM1001472v1 | 1,117,846,189 | 330,027 | 33.23M (3) | 1.54M (107) | 176013 | 2020-01-30 | SAMN11250489 | PRJNA528950 | IRIDIAN GENOMES | birds | ||
| blue-and-yellow macaw | Ara ararauna | GCA_010014805.1_ASM1001480v1 | 1,128,178,780 | 70,001 | 2.86M (9) | 128.14K (541) | 9226 | 2020-01-30 | SAMN10247388 | PRJNA497082 | IRIDIAN GENOMES | birds | ||
| maroon-bellied parakeet | Pyrrhura frontalis | GCA_010014865.1_ASM1001486v1 | 1,112,821,352 | 74,778 | 18.21M (4) | 86.23K (1,768) | 211511 | 2020-01-30 | SAMN09681955 | PRJNA481541 | IRIDIAN GENOMES | birds | ||
| birds | Psitteuteles goldiei | GCA_010014875.1_ASM1001487v1 | 1,125,670,205 | 69,999 | 19.09M (4) | 486.42K (324) | 176074 | 2020-01-30 | SAMN10247382 | PRJNA497076 | IRIDIAN GENOMES | birds | ||
| chattering lory | Lorius garrulus | GCA_010014925.1_ASM1001492v1 | 1,091,728,784 | 64,445 | 5.42M (8) | 122.76K (767) | VU | 13114 | 2020-01-30 | SAMN09580627 | PRJNA479580 | IRIDIAN GENOMES | birds | |
| Gray-breasted parakeet | Pyrrhura griseipectus | GCA_010014965.1_ASM1001496v1 | 1,129,186,538 | 75,556 | 4.08M (7) | 57.80K (3,035) | EN | 311890 | 2020-01-30 | SAMN13698507 | PRJNA598107 | IRIDIAN GENOMES | birds | |
| Major Mitchell's cockatoo | Lophochroa leadbeateri | GCA_010015045.1_ASM1001504v1 | 1,069,984,771 | 72,221 | 7.89M (5) | 516.62K (196) | 471713 | 2020-01-30 | SAMN11250505 | PRJNA528955 | IRIDIAN GENOMES | birds | ||
| Blue-throated macaw | Ara glaucogularis (3) | GCA_010015425.1_ASM1001542v1 | 1,135,105,966 | 74,445 | 19.54M (4) | 87.48K (1,069) | CR | 303304 | 2020-01-30 | SAMN10247383 | PRJNA497077 | IRIDIAN GENOMES | birds | |
| Blue-throated macaw | Ara glaucogularis (3) | GCA_013433245.1_TAMU_Btm_v1.0 | 1,139,702,960 | 56 | 63.88M (6) | 11.24M (35) | CR | 303304 | 2020-07-21 | SAMN15376960 | PRJNA642113 | Texas A&M University | birds | |
| military macaw | Ara militaris | GCA_010015965.1_ASM1001596v1 | 1,177,230,593 | 463,224 | 4.05M (5) | 177.52K (391) | VU | 57237 | 2020-01-30 | SAMN11250506 | PRJNA528956 | IRIDIAN GENOMES | birds | |
| jackass penguin | Spheniscus demersus | GCA_010077935.1_BGI_Sdem.V1 | 1,275,043,525 | 15,338 | 15.39M (25) | 109.37K (3,230) | EN | 92683 | 2020-01-31 | SAMN12384881 | PRJNA556735 | BGI-Shenzhen | birds | |
| Erect-crested penguin | Eudyptes sclateri | GCA_010078445.1_BGI_Escl.V1 | 1,211,402,317 | 3,484 | 1.92M (174) | 83.18K (4,160) | EN | 92688 | 2020-01-31 | SAMN12384874 | PRJNA556735 | BGI-Shenzhen | birds | |
| Yellow-eyed penguin | Megadyptes antipodes antipodes | GCA_010078485.1_BGI_Mant.V1 | 1,314,943,623 | 17,379 | 23.32M (17) | 89.50K (3,977) | EN | 2517240 | 2020-01-31 | SAMN12384877 | PRJNA556735 | BGI-Shenzhen | birds | |
| Australian little penguin | Eudyptula novaehollandiae | GCA_010078495.1_BGI_Enov.V1 | 1,353,666,924 | 15,946 | 29.28M (16) | 134.16K (2,855) | 2052820 | 2020-01-31 | SAMN12384878 | PRJNA556735 | BGI-Shenzhen | birds | ||
| Little blue penguin | Eudyptula minor | GCA_010080355.1_BGI_Emin.V1 | 1,462,615,782 | 22,396 | 21.13M (19) | 95.40K (4,142) | 37083 | 2020-01-31 | SAMN12384879 | PRJNA556735 | BGI-Shenzhen | birds | ||
| Royal penguin | Eudyptes schlegeli | GCA_010080425.1_BGI_Esch.V1 | 1,308,180,354 | 17,083 | 1.89M (198) | 42.60K (8,667) | 57240 | 2020-01-31 | SAMN12384870 | PRJNA556735 | BGI-Shenzhen | birds | ||
| White-flippered penguin | Eudyptula albosignata | GCA_010080465.1_BGI_Emin_alb.V1 | 1,370,511,393 | 18,591 | 21.87M (17) | 104.21K (3,639) | 345258 | 2020-01-31 | SAMN12384880 | PRJNA556735 | BGI-Shenzhen | birds | ||
| Northern rockhopper penguin | Eudyptes moseleyi | GCA_010082375.1_BGI_Emos.V1 | 1,301,647,863 | 20,381 | 2.25M (158) | 42.32K (8,700) | EN | 2495534 | 2020-01-31 | SAMN12384871 | PRJNA556735 | BGI-Shenzhen | birds | |
| Macaroni penguin | Eudyptes chrysolophus | GCA_010084205.1_BGI_Echrysol.V1 | 1,365,695,164 | 15,753 | 13.79M (29) | 215.03K (1,751) | VU | 79627 | 2020-01-31 | SAMN12384869 | PRJNA556735 | BGI-Shenzhen | birds | |
| Snares penguin | Eudyptes robustus | GCA_010085315.1_BGI_Erob.V1 | 1,241,676,055 | 62,719 | 367.54K (903) | 83.29K (4,115) | VU | 345251 | 2020-01-31 | SAMN12384876 | PRJNA556735 | BGI-Shenzhen | birds | |
| Fiordland penguin | Eudyptes pachyrhynchus | GCA_010085335.1_BGI_Epac.V1 | 1,295,505,775 | 52,188 | 8.91M (39) | 58.25K (6,233) | 37080 | 2020-01-31 | SAMN12384875 | PRJNA556735 | BGI-Shenzhen | birds | ||
| Rockhopper penguin | Eudyptes chrysocome | GCA_010085355.1_BGI_Echrysoc.V1 | 1,231,062,710 | 3,371 | 1.95M (169) | 80.55K (4,345) | VU | 79626 | 2020-01-31 | SAMN12384872 | PRJNA556735 | BGI-Shenzhen | birds | |
| Southern rockhopper penguin | Eudyptes filholi | GCA_010085365.1_BGI_Echrysoc_fil.V1 | 1,223,976,468 | 2,312 | 6.43M (49) | 86.11K (4,008) | 1419345 | 2020-01-31 | SAMN12384873 | PRJNA556735 | BGI-Shenzhen | birds | ||
| king penguin | Aptenodytes patagonicus | GCA_010087175.1_BGI_Apat.V1 | 1,252,291,219 | 15,968 | 2.91M (122) | 133.46K (2,558) | 9234 | 2020-01-31 | SAMN12384866 | PRJNA556735 | BGI-Shenzhen | birds | ||
| Eurasian eagle-owl | Bubo bubo | GCA_010303855.1_BubBub1.0 | 1,258,069,325 | 35,666 | 8.02M (44) | 37.09K (9,564) | 30461 | 2020-02-04 | SAMN08398466 | PRJNA431699 | GEROMICS | birds | ||
| hawks & eagles | Buteo japonicus | GCA_010312235.1_ButJap1.0 | 1,259,715,124 | 29,199 | 7.47M (53) | 36.72K (9,543) | 224669 | 2020-02-04 | SAMN08398473 | PRJNA431699 | GEROMICS | birds | ||
| common kestrel | Falco tinnunculus | GCA_010332995.1_FalTin1.0 | 1,179,901,403 | 69,109 | 21.23M (17) | 37.05K (9,275) | 100819 | 2020-02-04 | SAMN08398480 | PRJNA431699 | GEROMICS | birds | ||
| Oriental scops-owl | Otus sunia | GCA_010365825.1_OtuSun1.0 | 1,231,433,939 | 108,826 | 18.54M (17) | 52.37K (6,793) | 257818 | 2020-02-04 | SAMN08398467 | PRJNA431699 | GEROMICS | birds | ||
| black-bellied sandgrouse | Pterocles orientalis | GCA_011057875.1_REN_Porient_1.0 | 1,201,761,903 | 15,588 | 1.10M (308) | 48.75K (6,562) | 227169 | 2020-03-02 | SAMN11607795 | PRJNA473697 | International Fund for Houbara Conservation | birds | ||
| song sparrow | Melospiza melodia maxima | GCA_011057915.1_Mmel_1.0 | 978,299,478 | 13,784 | 5.58M (48) | 31.71K (8,155) | 2498840 | 2020-03-02 | SAMN10622322 | PRJNA511035 | UNIVERSITY OF GEORGIA | birds | ||
| freckled duck | Stictonetta naevosa | GCA_011074415.1_BPBGC_Snae_1.0 | 1,132,698,962 | 8,410 | 10.71M (33) | 136.96K (2,155) | 45637 | 2020-03-10 | SAMN13257911 | PRJNA588796 | Brood Parasitic Bird Genomes Consortium | birds | ||
| birds | Heteronetta atricapilla | GCA_011075105.1_BPBGC_Hatr_1.0 | 1,151,880,818 | 8,590 | 23.36M (13) | 151.40K (1,955) | 555264 | 2020-03-10 | SAMN13257443 | PRJNA588796 | Brood Parasitic Bird Genomes Consortium | birds | ||
| birds | Nettapus auritus | GCA_011076525.1_BPBGC_Naur_1.0 | 1,134,546,692 | 8,857 | 26.01M (13) | 105.08K (2,844) | 658922 | 2020-03-10 | SAMN13257464 | PRJNA588796 | Brood Parasitic Bird Genomes Consortium | birds | ||
| ruddy duck | Oxyura jamaicensis (2) | GCA_011077185.1_BPBGC_Ojam_1.0 | 1,147,601,678 | 9,590 | 36.15M (9) | 128.59K (2,313) | 8884 | 2020-03-10 | SAMN13257492 | PRJNA588796 | Brood Parasitic Bird Genomes Consortium | birds | ||
| view | ruddy duck | Oxyura jamaicensis (2) | GCF_011077185.1_BPBGC_Ojam_1.0 | 1,147,585,764 | 9,589 | 36.15M (9) | 128.59K (2,313) | 8884 | 2020-03-10 | SAMN13257492 | PRJNA588796 | Brood Parasitic Bird Genomes Consortium | birds | |
| Golden-fronted woodpecker | Melanerpes aurifrons | GCA_011125475.1_OU_Melaur_1 | 1,309,626,418 | 442 | 16.05M (28) | 371916 | 2020-03-17 | SAMN13719207 | PRJNA598863 | University of Oklahoma | birds | |||
| brown-throated parakeet | Eupsittula pertinax | GCA_011317185.1_ASM1131718v1 | 1,171,654,275 | 75,556 | 9.07M (6) | 70.94K (2,706) | 492513 | 2020-03-16 | SAMN13635021 | PRJNA596746 | IRIDIAN GENOMES | birds | ||
| Black-capped chickadee | Poecile atricapillus (2) | GCA_011421415.1_CUB_Patr_1.0 | 1,047,807,048 | 1,870 | 64.67M (6) | 109.51K (2,589) | 48891 | 2020-03-19 | SAMN13264372 | PRJNA589043 | University of Colorado Boulder | birds | ||
| Black-capped chickadee | Poecile atricapillus (2) | GCA_013398625.1_ASM1339862v1 | 1,047,311,074 | 3,149 | 11.31M (23) | 109.51K (2,589) | 48891 | 2020-07-10 | SAMN12253993 | PRJNA545868 | B10K Consortium | birds | ||
| white-capped parrot | Pionus senilis | GCA_011762725.1_ASM1176272v1 | 1,067,577,099 | 677,776 | 17.61M (4) | 96.46K (1,586) | 30456 | 2020-03-27 | SAMN09688240 | PRJNA481561 | IRIDIAN GENOMES | birds | ||
| Green-cheeked parakeet | Pyrrhura molinae | GCA_011763355.1_ASM1176335v1 | 1,122,251,672 | 66,668 | 4.67M (8) | 82.82K (2,016) | 311895 | 2020-03-27 | SAMN09681958 | PRJNA481548 | IRIDIAN GENOMES | birds | ||
| birds | Pyrrhura perlata | GCA_011763455.1_ASM1176345v1 | 1,111,465,322 | 62,223 | 3.73M (10) | 101.89K (1,325) | VU | 311897 | 2020-03-27 | SAMN09683514 | PRJNA481550 | IRIDIAN GENOMES | birds | |
| Eclectus parrot | Eclectus roratus | GCA_011763535.1_ASM1176353v1 | 1,101,365,900 | 73,334 | 3.06M (11) | 86.91K (1,070) | 176024 | 2020-03-27 | SAMN11250500 | PRJNA528951 | IRIDIAN GENOMES | birds | ||
| birds | Guaruba guarouba | GCA_011800095.1_ASM1180009v1 | 1,151,548,123 | 63,778 | 9.32M (7) | 126.76K (1,456) | VU | 51906 | 2020-03-31 | SAMN12165723 | PRJNA551769 | IRIDIAN GENOMES | birds | |
| birds | Ardeotis arabs | GCA_011801015.1_REN_Aarabs_1.0 | 1,297,600,582 | 148,690 | 47.61K (7,684) | 34.35K (10,594) | 172690 | 2020-03-31 | SAMN11607792 | PRJNA473697 | International Fund for Houbara Conservation | birds | ||
| golden eagle | Aquila chrysaetos japonica | GCA_012057345.1_Achrysaetos_1.0 | 1,196,037,330 | 35,366 | 118.56K (2,716) | 54.77K (5,787) | 335091 | 2020-04-03 | SAMD00161055 | PRJDB7992 | Laboratory of Ecogenetics, Environmental Biology Division, National Institute for Environmental Studies | birds | ||
| birds | Molothrus ater (3) | GCA_012460135.1_BPBGC_Mater_1.0 | 1,087,312,585 | 413 | 52.12M (7) | 13.27M (25) | 84834 | 2020-04-20 | SAMN14074414 | PRJNA606972 | Brood Parasitic Bird Genomes Consortium | birds | ||
| birds | Molothrus ater (3) | GCA_013401155.1_ASM1340115v1 | 1,229,058,992 | 144,198 | 1.95M (170) | 89.16K (3,653) | 84834 | 2020-07-10 | SAMN12254001 | PRJNA545868 | B10K Consortium | birds | ||
| view | birds | Molothrus ater (3) | GCF_012460135.1_BPBGC_Mater_1.0 | 1,087,312,585 | 413 | 52.12M (7) | 13.27M (25) | 84834 | 2020-04-20 | SAMN14074414 | PRJNA606972 | Brood Parasitic Bird Genomes Consortium | birds | |
| Northern goshawk | Accipiter gentilis (3) | GCA_012487025.1_Agentilis_1.0 | 1,179,252,740 | 25,797 | 150.92K (2,152) | 67.03K (4,835) | 8957 | 2020-04-08 | SAMD00156788 | PRJDB7804 | Environmental Genomics Office, Center for Enviromental Biology and Ecosystem Studies, National Institute for Environmental Studies | birds | ||
| mountain hawk-eagle | Nisaetus nipalensis | GCA_012487455.1_Nnipalensis_1.0 | 1,200,029,769 | 38,768 | 116.00K (2,779) | 56.48K (5,603) | 214438 | 2020-04-08 | SAMD00156789 | PRJDB7805 | Environmental Genomics Office, Center for Enviromental Biology and Ecosystem Studies, National Institute for Environmental Studies | birds | ||
| hooded crane | Grus monacha | GCA_012487855.1_Gmonacha_1.0 | 1,182,186,797 | 45,731 | 89.78K (3,342) | 38.53K (8,095) | VU | 40818 | 2020-04-08 | SAMD00156792 | PRJDB7809 | Environmental Genomics Office, Center for Enviromental Biology and Ecosystem Studies, National Institute for Environmental Studies | birds | |
| White-naped crane | Antigone vipio | GCA_012488435.1_Gvipio_1.0 | 1,181,556,295 | 51,019 | 77.16K (3,953) | 32.90K (9,784) | 2717088 | 2020-04-08 | SAMD00156793 | PRJDB7810 | Environmental Genomics Office, Center for Enviromental Biology and Ecosystem Studies, National Institute for Environmental Studies | birds | ||
| monk parakeet | Myiopsitta monachus (2) | GCA_013036005.1_ASM1303600v1 | 1,118,816,385 | 74,445 | 12.83M (6) | 69.91K (2,678) | 176066 | 2020-05-11 | SAMN11250504 | PRJNA528952 | IRIDIAN GENOMES | birds | ||
| view | monk parakeet | Myiopsitta monachus (2) | GCA_017639245.1_MMon_1.0 | 1,168,583,304 | 291 | 75.72M (6) | 22.65M (14) | 176066 | 2021-03-30 | SAMN16846069 | PRJNA679636 | University of Vienna | birds | |
| rufous-bellied thrush | Turdus rufiventris | GCA_013186435.1_ASM1318643v1 | 1,046,948,833 | 11,042 | 4.18M (69) | 34.00K (8,404) | 311356 | 2020-05-28 | SAMN08668864 | PRJNA437639 | LNCC | birds | ||
| birds | Nyctibius grandis (3) | GCA_013368595.1_bNycGra1.alt | 1,041,284,291 | 1,395 | 2.46M (118) | 2.46M (118) | 48427 | 2020-06-23 | SAMN12622411 | PRJNA562021 | Vertebrate Genomes Project | birds | ||
| view | birds | Nyctibius grandis (3) | GCA_013368605.1_bNycGra1.pri | 1,256,414,880 | 191 | 92.36M (6) | 23.23M (13) | 48427 | 2020-06-23 | SAMN12622411 | PRJNA562020 | Vertebrate Genomes Project | birds | |
| birds | Nyctibius grandis (3) | GCA_013399155.1_ASM1339915v1 | 1,154,230,834 | 55,068 | 158.96K (1,654) | 64.96K (4,757) | 48427 | 2020-07-10 | SAMN12253808 | PRJNA545868 | B10K Consortium | birds | ||
| Eurasian coot | Fulica atra | GCA_013372525.1_Fatr_1.0 | 1,167,597,722 | 17,827 | 6.39M (46) | 246.16K (1,314) | 9121 | 2020-06-24 | SAMN14974647 | PRJNA633903 | University of Illinois at Urbana-Champaign | birds | ||
| black swan | Cygnus atratus (11) | GCA_013377495.1_Cygnus_atratus_primary_v1.0 | 1,122,262,644 | 395 | 12.81M (27) | 8868 | 2020-06-30 | SAMN15332785 | PRJNA640810 | The University of Queensland | birds | |||
| black swan | Cygnus atratus (11) | GCA_907166815.1_blackswan2.fasta.gz | 10,535,770,468 | 982,151 | 18.34K (205,248) | 8868 | 2021-08-03 | SAMEA8673268 | PRJEB44719 | THE UNIVERSITY OF QUEENSLAND | birds | |||
| black swan | Cygnus atratus (11) | GCA_907166825.1_blackswan6.fasta.gz | 8,797,591,913 | 659,215 | 20.92K (156,957) | 8868 | 2021-08-03 | SAMEA8673272 | PRJEB44719 | THE UNIVERSITY OF QUEENSLAND | birds | |||
| black swan | Cygnus atratus (11) | GCA_907166835.1_blackswan7.fasta.gz | 11,622,211,570 | 900,400 | 20.63K (209,437) | 8868 | 2021-08-03 | SAMEA8673273 | PRJEB44719 | THE UNIVERSITY OF QUEENSLAND | birds | |||
| black swan | Cygnus atratus (11) | GCA_907166845.1_blackswan3.fasta.gz | 10,384,758,300 | 972,419 | 18.08K (204,685) | 8868 | 2021-08-03 | SAMEA8673269 | PRJEB44719 | THE UNIVERSITY OF QUEENSLAND | birds | |||
| view | black swan | Cygnus atratus (11) | GCF_013377495.1_Cygnus_atratus_primary_v1.0 | 1,122,279,392 | 396 | 12.81M (27) | 8868 | 2020-06-30 | SAMN15332785 | PRJNA640810 | The University of Queensland | birds | ||
| birds | Crypturellus undulatus | GCA_013389825.1_ASM1338982v1 | 1,021,424,416 | 84,860 | 387.77K (653) | 99.50K (2,712) | 48396 | 2020-07-06 | SAMN12253746 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Crypturellus soui | GCA_013389845.1_ASM1338984v1 | 1,043,359,976 | 75,803 | 846.76K (309) | 79.01K (3,512) | 458187 | 2020-07-06 | SAMN12253745 | PRJNA545868 | B10K Consortium | birds | ||
| squirrel cuckoo | Piaya cayana | GCA_013389865.1_ASM1338986v1 | 1,151,257,265 | 134,865 | 133.72K (2,188) | 44.04K (6,945) | 33601 | 2020-07-06 | SAMN12253892 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Geococcyx californianus | GCA_013389885.1_ASM1338988v1 | 1,134,037,073 | 213,604 | 59.47K (4,853) | 47.04K (6,226) | 8947 | 2020-07-06 | SAMN12253751 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Sula dactylatra | GCA_013389905.1_ASM1338990v1 | 1,136,665,023 | 67,870 | 156.24K (1,653) | 38.91K (6,746) | 56068 | 2020-07-06 | SAMN12253860 | PRJNA545868 | B10K Consortium | birds | ||
| Northern long-tailed tit | Aegithalos caudatus | GCA_013389925.1_ASM1338992v1 | 1,013,845,238 | 51,963 | 311.46K (788) | 34.05K (7,883) | 73327 | 2020-07-06 | SAMN12253835 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Fregata magnificens | GCA_013389945.1_ASM1338994v1 | 1,177,430,334 | 97,455 | 145.41K (1,967) | 35.51K (7,797) | 37042 | 2020-07-06 | SAMN12253859 | PRJNA545868 | B10K Consortium | birds | ||
| puerto rican tody | Todus mexicanus | GCA_013389965.1_ASM1338996v1 | 853,262,227 | 322,726 | 12.67K (16,730) | 8.74K (24,568) | 135184 | 2020-07-06 | SAMN12253871 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Dryoscopus gambensis | GCA_013389985.1_ASM1338998v1 | 992,742,094 | 95,402 | 113.11K (1,895) | 29.39K (8,338) | 85069 | 2020-07-06 | SAMN12253866 | PRJNA545868 | B10K Consortium | birds | ||
| green broadbill | Calyptomena viridis | GCA_013390005.1_ASM1339000v1 | 1,056,832,477 | 69,385 | 169.24K (1,530) | 40.19K (6,450) | 135972 | 2020-07-06 | SAMN12253865 | PRJNA545868 | B10K Consortium | birds | ||
| hooded pitta | Pitta sordida | GCA_013390025.1_ASM1339002v1 | 1,088,830,872 | 51,629 | 176.67K (1,418) | 41.70K (6,453) | 9163 | 2020-07-06 | SAMN12253864 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Picathartes gymnocephalus | GCA_013390045.1_ASM1339004v1 | 1,046,995,276 | 102,616 | 110.34K (2,034) | 36.51K (7,388) | VU | 175131 | 2020-07-06 | SAMN12253907 | PRJNA545868 | B10K Consortium | birds | |
| birds | Chloropsis hardwickii | GCA_013390065.1_ASM1339006v1 | 1,054,347,212 | 12,629 | 572.70K (466) | 39.38K (7,240) | 667144 | 2020-07-06 | SAMN12253970 | PRJNA545868 | B10K Consortium | birds | ||
| Whooping crane | Grus americana | GCA_013390085.1_ASM1339008v1 | 1,155,476,187 | 33,501 | 266.48K (1,194) | 46.95K (6,717) | EN | 9117 | 2020-07-06 | SAMN12253918 | PRJNA545868 | B10K Consortium | birds | |
| birds | Tichodroma muraria | GCA_013390105.1_ASM1339010v1 | 910,679,850 | 201,993 | 30.90K (5,844) | 14.90K (13,538) | 237442 | 2020-07-06 | SAMN12253913 | PRJNA545868 | B10K Consortium | birds | ||
| superb lyrebird | Menura novaehollandiae | GCA_013396355.1_ASM1339635v1 | 1,060,480,557 | 4,051 | 2.36M (129) | 85.46K (3,626) | 47692 | 2020-07-10 | SAMN12253747 | PRJNA545868 | B10K Consortium | birds | ||
| boat-billed heron | Cochlearius cochlearius | GCA_013396365.1_ASM1339636v1 | 1,173,743,951 | 3,770 | 1.66M (196) | 62.81K (5,350) | 110676 | 2020-07-10 | SAMN12253750 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Ardeotis kori | GCA_013396375.1_ASM1339637v1 | 1,150,486,959 | 9,399 | 639.94K (481) | 53.37K (5,953) | 89386 | 2020-07-10 | SAMN12253748 | PRJNA545868 | B10K Consortium | birds | ||
| American anhinga | Anhinga anhinga | GCA_013396435.1_ASM1339643v1 | 1,183,194,070 | 10,030 | 337.50K (1,016) | 25.98K (12,875) | 56067 | 2020-07-10 | SAMN12253762 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Lophotis ruficrista | GCA_013396455.1_ASM1339645v1 | 1,111,150,882 | 4,986 | 702.39K (429) | 57.90K (5,557) | 172689 | 2020-07-10 | SAMN12253761 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Smithornis capensis | GCA_013396465.1_ASM1339646v1 | 1,061,320,296 | 7,272 | 1.79M (148) | 67.22K (4,138) | 363769 | 2020-07-10 | SAMN12253759 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Ptilorrhoa leucosticta | GCA_013396485.1_ASM1339648v1 | 1,110,559,233 | 11,358 | 1.21M (223) | 77.64K (3,516) | 449384 | 2020-07-10 | SAMN12253757 | PRJNA545868 | B10K Consortium | birds | ||
| Black-legged seriema | Chunga burmeisteri | GCA_013396505.1_ASM1339650v1 | 1,168,693,490 | 3,579 | 1.41M (226) | 72.52K (4,723) | 1352770 | 2020-07-10 | SAMN12253760 | PRJNA545868 | B10K Consortium | birds | ||
| pygmy drongo | Chaetorhynchus papuensis | GCA_013396525.1_ASM1339652v1 | 1,045,122,515 | 7,933 | 712.20K (402) | 96.57K (2,961) | 254446 | 2020-07-10 | SAMN12253758 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Tachuris rubrigastra | GCA_013396555.1_ASM1339655v1 | 1,059,681,690 | 3,838 | 2.76M (109) | 66.11K (4,508) | 495162 | 2020-07-10 | SAMN12253756 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Rhodinocichla rosea | GCA_013396575.1_ASM1339657v1 | 1,031,972,585 | 5,052 | 2.55M (108) | 29.64K (9,279) | 58203 | 2020-07-10 | SAMN12253755 | PRJNA545868 | B10K Consortium | birds | ||
| Rufous potoo | Nyctibius bracteatus | GCA_013396595.1_ASM1339659v1 | 1,169,290,544 | 12,634 | 380.69K (604) | 33.24K (9,320) | 48426 | 2020-07-10 | SAMN12253753 | PRJNA545868 | B10K Consortium | birds | ||
| Wilson's storm-petrel | Oceanites oceanicus | GCA_013396615.1_ASM1339661v1 | 1,178,378,986 | 8,405 | 406.32K (840) | 28.09K (11,552) | 79653 | 2020-07-10 | SAMN12253754 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Penelope pileata | GCA_013396635.1_ASM1339663v1 | 1,027,970,763 | 12,091 | 732.58K (359) | 84.12K (3,536) | VU | 1118817 | 2020-07-10 | SAMN12253771 | PRJNA545868 | B10K Consortium | birds | |
| birds | Campylorhamphus procurvoides | GCA_013396655.1_ASM1339665v1 | 1,047,499,103 | 16,876 | 1.03M (278) | 152.16K (1,878) | 190295 | 2020-07-10 | SAMN12253772 | PRJNA545868 | B10K Consortium | birds | ||
| red-headed barbet | Eubucco bourcierii | GCA_013396675.1_ASM1339667v1 | 1,237,629,233 | 46,120 | 208.02K (1,366) | 26.55K (11,230) | 91767 | 2020-07-10 | SAMN12253768 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Sakesphorus luctuosus | GCA_013396695.1_ASM1339669v1 | 1,080,150,879 | 25,248 | 564.38K (463) | 84.12K (3,135) | 419690 | 2020-07-10 | SAMN12253769 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Ciccaba nigrolineata | GCA_013396715.1_ASM1339671v1 | 1,188,087,058 | 30,009 | 419.31K (765) | 52.32K (6,393) | 1118524 | 2020-07-10 | SAMN12253770 | PRJNA545868 | B10K Consortium | birds | ||
| variegated antpitta | Grallaria varia | GCA_013396735.1_ASM1339673v1 | 1,056,033,657 | 26,174 | 482.39K (553) | 64.15K (4,452) | 117165 | 2020-07-10 | SAMN12253766 | PRJNA545868 | B10K Consortium | birds | ||
| tawny-throated leaftosser | Sclerurus mexicanus | GCA_013396755.1_ASM1339675v1 | 1,046,918,217 | 13,055 | 1.03M (285) | 128.49K (2,246) | 265632 | 2020-07-10 | SAMN12253767 | PRJNA545868 | B10K Consortium | birds | ||
| amazonian umbrellabird | Cephalopterus ornatus | GCA_013396775.1_ASM1339677v1 | 1,061,560,279 | 26,262 | 292.88K (915) | 75.60K (3,894) | 114276 | 2020-07-10 | SAMN12253765 | PRJNA545868 | B10K Consortium | birds | ||
| great blue turaco | Corythaeola cristata | GCA_013396815.1_ASM1339681v1 | 1,091,055,752 | 36,534 | 102.99K (2,682) | 7.22K (34,485) | 103954 | 2020-07-10 | SAMN12253763 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Psilopogon haemacephalus | GCA_013396835.1_ASM1339683v1 | 1,204,560,348 | 45,061 | 297.14K (871) | 36.27K (8,042) | 2585815 | 2020-07-10 | SAMN12253782 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Hemiprocne comata (3) | GCA_013396855.1_ASM1339685v1 | 1,141,196,188 | 30,279 | 355.68K (822) | 62.39K (4,865) | 243314 | 2020-07-10 | SAMN12253781 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Hemiprocne comata (3) | GCA_020745695.1_bHemCom1.alt.cur | 1,052,608,110 | 2,405 | 1.77M (169) | 1.77M (169) | 243314 | 2021-11-05 | SAMN22588383 | PRJNA774830 | Vertebrate Genomes Project | birds | ||
| view | birds | Hemiprocne comata (3) | GCA_020745705.1_bHemCom1.pri.cur | 1,164,813,063 | 146 | 91.35M (4) | 20.53M (18) | 243314 | 2021-11-05 | SAMN22588383 | PRJNA774831 | Vertebrate Genomes Project | birds | |
| black-whiskered vireo | Vireo altiloquus | GCA_013396875.1_ASM1339687v1 | 1,064,977,253 | 28,485 | 668.06K (450) | 121.57K (2,442) | 34956 | 2020-07-10 | SAMN12253780 | PRJNA545868 | B10K Consortium | birds | ||
| white-winged crossbill | Loxia leucoptera | GCA_013396895.1_ASM1339689v1 | 1,027,807,383 | 26,321 | 614.05K (457) | 96.29K (2,954) | 96539 | 2020-07-10 | SAMN12253777 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Stercorarius parasiticus | GCA_013396915.1_ASM1339691v1 | 1,159,854,254 | 11,280 | 644.60K (511) | 107.05K (3,126) | 54059 | 2020-07-10 | SAMN12253778 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Baryphthengus martii | GCA_013396935.1_ASM1339693v1 | 1,100,876,976 | 37,658 | 225.35K (1,245) | 70.14K (4,339) | 176943 | 2020-07-10 | SAMN12253779 | PRJNA545868 | B10K Consortium | birds | ||
| golden-crowned kinglet | Regulus satrapa | GCA_013396955.1_ASM1339695v1 | 1,011,445,235 | 38,895 | 363.23K (719) | 28.94K (9,252) | 13245 | 2020-07-10 | SAMN12253776 | PRJNA545868 | B10K Consortium | birds | ||
| collared puffbird | Bucco capensis | GCA_013396975.1_ASM1339697v1 | 988,120,178 | 41,629 | 338.47K (638) | 66.97K (3,405) | 135168 | 2020-07-10 | SAMN12253774 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Dicaeum eximium | GCA_013396995.1_ASM1339699v1 | 1,015,048,105 | 16,764 | 1.10M (236) | 117.00K (2,396) | 667154 | 2020-07-10 | SAMN12253792 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Myiagra hebetior | GCA_013397015.1_ASM1339701v1 | 1,049,898,355 | 20,423 | 831.09K (348) | 66.18K (4,463) | VU | 381031 | 2020-07-10 | SAMN12253791 | PRJNA545868 | B10K Consortium | birds | |
| Wedge-rumped storm-petrel | Oceanodroma tethys | GCA_013397025.1_ASM1339702v1 | 1,189,005,779 | 35,945 | 372.49K (886) | 54.51K (6,049) | 79633 | 2020-07-10 | SAMN12253790 | PRJNA545868 | B10K Consortium | birds | ||
| yellow-belllied whistler | Pachycephala philippinensis | GCA_013397055.1_ASM1339705v1 | 1,041,722,788 | 28,049 | 492.78K (550) | 60.66K (4,722) | 449367 | 2020-07-10 | SAMN12253786 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Rhabdornis inornatus | GCA_013397075.1_ASM1339707v1 | 1,038,144,357 | 18,698 | 1.05M (260) | 152.18K (1,902) | 237438 | 2020-07-10 | SAMN12253787 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Sterrhoptilus dennistouni | GCA_013397095.1_ASM1339709v1 | 1,050,381,639 | 31,158 | 955.54K (282) | 50.78K (5,635) | 2585820 | 2020-07-10 | SAMN12253785 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Edolisoma coerulescens | GCA_013397115.1_ASM1339711v1 | 1,042,448,157 | 13,754 | 1.34M (211) | 131.18K (2,154) | 2585810 | 2020-07-10 | SAMN12253783 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Pachyramphus minor | GCA_013397135.1_ASM1339713v1 | 1,054,898,176 | 24,586 | 564.84K (498) | 89.58K (3,347) | 369605 | 2020-07-10 | SAMN12253822 | PRJNA545868 | B10K Consortium | birds | ||
| fairy bluebird | Irena cyanogastra | GCA_013397155.1_ASM1339715v1 | 1,036,547,706 | 29,340 | 552.86K (483) | 128.72K (2,199) | 175120 | 2020-07-10 | SAMN12253784 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Platysteira castanea | GCA_013397175.1_ASM1339717v1 | 1,058,888,301 | 24,360 | 719.15K (383) | 84.60K (3,539) | 1160851 | 2020-07-10 | SAMN12253821 | PRJNA545868 | B10K Consortium | birds | ||
| green hylia | Hylia prasina | GCA_013397195.1_ASM1339719v1 | 1,029,027,164 | 30,799 | 688.80K (388) | 64.12K (4,505) | 208073 | 2020-07-10 | SAMN12253820 | PRJNA545868 | B10K Consortium | birds | ||
| northern cardinal | Cardinalis cardinalis (2) | GCA_013397215.1_ASM1339721v1 | 1,037,930,431 | 39,279 | 451.35K (559) | 90.77K (3,042) | 98964 | 2020-07-10 | SAMN12253819 | PRJNA545868 | B10K Consortium | birds | ||
| northern cardinal | Cardinalis cardinalis (2) | GCA_014549065.1_CCar_1.0 | 1,044,724,463 | 4,762 | 3.64M (73) | 133.92K (2,081) | 98964 | 2020-09-15 | SAMN15394674 | PRJNA642398 | Harvard University | birds | ||
| birds | Lanius ludovicianus | GCA_013397235.1_ASM1339723v1 | 1,040,379,146 | 18,148 | 684.97K (435) | 98.06K (2,924) | 28713 | 2020-07-10 | SAMN12253815 | PRJNA545868 | B10K Consortium | birds | ||
| Carolina wren | Thryothorus ludovicianus | GCA_013397245.1_ASM1339724v1 | 1,031,447,271 | 37,520 | 495.20K (559) | 60.40K (4,601) | 74200 | 2020-07-10 | SAMN12253818 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Burhinus bistriatus | GCA_013397275.1_ASM1339727v1 | 1,208,588,303 | 22,572 | 409.13K (817) | 46.94K (7,428) | 240201 | 2020-07-10 | SAMN12253814 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Polioptila caerulea | GCA_013397295.1_ASM1339729v1 | 1,038,028,908 | 26,442 | 602.92K (452) | 50.94K (5,709) | 66707 | 2020-07-10 | SAMN12253816 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Donacobius atricapilla | GCA_013397315.1_ASM1339731v1 | 1,054,188,209 | 31,620 | 542.86K (532) | 64.87K (4,589) | 237420 | 2020-07-10 | SAMN12253813 | PRJNA545868 | B10K Consortium | birds | ||
| Bali myna | Leucopsar rothschildi (2) | GCA_013397325.1_ASM1339732v1 | 1,019,064,604 | 17,982 | 605.90K (467) | 93.56K (3,075) | CR | 127929 | 2020-07-10 | SAMN12253829 | PRJNA545868 | B10K Consortium | birds | |
| Bali myna | Leucopsar rothschildi (2) | GCA_014363365.1_L_rothschildi_scaffold_01 | 999,682,512 | 13,134 | 220.24K (1,127) | 104.20K (2,490) | CR | 127929 | 2020-08-22 | SAMD00237439 | PRJDB10196 | Environmental Genomics Office, Center for Enviromental Biology and Ecosystem Studies, National Institute for Environmental Studies | birds | |
| white wagtail | Motacilla alba | GCA_013397355.1_ASM1339735v1 | 1,043,123,529 | 21,258 | 683.06K (407) | 87.01K (3,392) | 45807 | 2020-07-10 | SAMN12253824 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Toxostoma redivivum | GCA_013397375.1_ASM1339737v1 | 1,032,473,302 | 24,180 | 747.75K (381) | 88.07K (3,295) | 99882 | 2020-07-10 | SAMN12253839 | PRJNA545868 | B10K Consortium | birds | ||
| crow tit | Sinosuthora webbiana | GCA_013397395.1_ASM1339739v1 | 1,050,295,543 | 31,009 | 970.77K (283) | 78.60K (3,722) | 337173 | 2020-07-10 | SAMN12253833 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Neopipo cinnamomea | GCA_013397415.1_ASM1339741v1 | 1,046,027,905 | 11,198 | 485.96K (507) | 43.15K (6,440) | 456388 | 2020-07-10 | SAMN12253882 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Erythrocercus mccallii | GCA_013397435.1_ASM1339743v1 | 1,030,110,820 | 11,369 | 346.48K (724) | 84.00K (3,310) | 107208 | 2020-07-10 | SAMN12253870 | PRJNA545868 | B10K Consortium | birds | ||
| groove-billed ani | Crotophaga sulcirostris | GCA_013397455.1_ASM1339745v1 | 1,077,958,271 | 4,080 | 1.69M (175) | 83.60K (3,632) | 33598 | 2020-07-10 | SAMN12253881 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Furnarius figulus | GCA_013397465.1_ASM1339746v1 | 1,020,012,445 | 7,874 | 650.94K (375) | 55.55K (4,726) | 463165 | 2020-07-10 | SAMN12253878 | PRJNA545868 | B10K Consortium | birds | ||
| McConnell's flycatcher | Mionectes macconnelli | GCA_013397495.1_ASM1339749v1 | 1,042,002,978 | 4,545 | 1.65M (168) | 72.81K (4,037) | 254557 | 2020-07-10 | SAMN12253879 | PRJNA545868 | B10K Consortium | birds | ||
| Eurasian hoopoe | Upupa epops | GCA_013397515.1_ASM1339751v1 | 972,138,363 | 28,829 | 227.84K (1,084) | 49.41K (5,370) | 57439 | 2020-07-10 | SAMN12253908 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Pterocles burchelli | GCA_013397535.1_ASM1339753v1 | 1,101,016,587 | 6,906 | 594.48K (440) | 43.20K (7,191) | 2585816 | 2020-07-10 | SAMN12253932 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Urocynchramus pylzowi | GCA_013397555.1_ASM1339755v1 | 1,030,914,293 | 14,905 | 858.27K (330) | 53.99K (5,595) | 571890 | 2020-07-10 | SAMN12253909 | PRJNA545868 | B10K Consortium | birds | ||
| satin bowerbird | Ptilonorhynchus violaceus | GCA_013397565.1_ASM1339756v1 | 1,057,848,093 | 21,059 | 1.22M (231) | 120.95K (2,335) | 28724 | 2020-07-10 | SAMN12253905 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Halcyon senegalensis | GCA_013397595.1_ASM1339759v1 | 1,137,736,700 | 3,702 | 2.05M (149) | 95.63K (3,391) | 342381 | 2020-07-10 | SAMN12253930 | PRJNA545868 | B10K Consortium | birds | ||
| galah | Eolophus roseicapilla | GCA_013397615.1_ASM1339761v1 | 1,065,334,762 | 14,367 | 418.39K (643) | 21.73K (12,623) | 176039 | 2020-07-10 | SAMN12253931 | PRJNA545868 | B10K Consortium | birds | ||
| picui ground-dove | Columbina picui | GCA_013397635.1_ASM1339763v1 | 1,097,919,941 | 13,415 | 616.88K (442) | 24.99K (11,181) | 115618 | 2020-07-10 | SAMN12253927 | PRJNA545868 | B10K Consortium | birds | ||
| brown-hooded gull | Chroicocephalus maculipennis | GCA_013397655.1_ASM1339765v1 | 1,151,142,299 | 11,603 | 476.22K (676) | 39.39K (7,682) | 287016 | 2020-07-10 | SAMN12253928 | PRJNA545868 | B10K Consortium | birds | ||
| palm cockatoo | Probosciger aterrimus | GCA_013397665.1_ASM1339766v1 | 1,061,537,285 | 14,498 | 198.46K (1,478) | 32.27K (8,325) | 141839 | 2020-07-10 | SAMN12253926 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Centropus unirufus | GCA_013397695.1_ASM1339769v1 | 1,048,837,197 | 4,902 | 2.06M (138) | 79.47K (3,678) | 1118519 | 2020-07-10 | SAMN12253925 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Calcarius ornatus | GCA_013397715.1_ASM1339771v1 | 1,056,295,845 | 10,673 | 1.24M (220) | 52.43K (5,249) | VU | 198940 | 2020-07-10 | SAMN12253923 | PRJNA545868 | B10K Consortium | birds | |
| birds | Rhagologus leucostigma | GCA_013397725.1_ASM1339772v1 | 1,045,193,615 | 10,891 | 1.44M (203) | 141.35K (2,093) | 156170 | 2020-07-10 | SAMN12253942 | PRJNA545868 | B10K Consortium | birds | ||
| Loria's bird-of-paradise | Cnemophilus loriae | GCA_013397755.1_ASM1339775v1 | 1,043,492,295 | 17,495 | 1.43M (200) | 122.94K (2,325) | 254448 | 2020-07-10 | SAMN12253940 | PRJNA545868 | B10K Consortium | birds | ||
| wattled ploughbill | Eulacestoma nigropectus | GCA_013397775.1_ASM1339777v1 | 1,040,437,550 | 11,293 | 1.16M (239) | 75.92K (4,040) | 461239 | 2020-07-10 | SAMN12253941 | PRJNA545868 | B10K Consortium | birds | ||
| northern chowchilla | Orthonyx spaldingii | GCA_013397795.1_ASM1339779v1 | 1,034,662,073 | 11,336 | 1.30M (221) | 81.41K (3,679) | 38397 | 2020-07-10 | SAMN12253936 | PRJNA545868 | B10K Consortium | birds | ||
| rufous-naped whistler | Aleadryas rufinucha | GCA_013397815.1_ASM1339781v1 | 1,050,107,613 | 33,566 | 367.77K (768) | 90.30K (3,326) | 461220 | 2020-07-10 | SAMN12253938 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Onychorhynchus coronatus | GCA_013397825.1_ASM1339782v1 | 1,072,513,727 | 3,396 | 3.00M (104) | 96.25K (3,098) | 360224 | 2020-07-10 | SAMN12253933 | PRJNA545868 | B10K Consortium | birds | ||
| Fan-tailed berrypecker | Melanocharis versteri | GCA_013397845.1_ASM1339784v1 | 1,030,540,361 | 21,103 | 854.66K (320) | 103.75K (2,820) | 254552 | 2020-07-10 | SAMN12253939 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Struthidea cinerea | GCA_013397865.1_ASM1339786v1 | 1,042,119,318 | 10,902 | 1.10M (256) | 74.27K (4,134) | 181839 | 2020-07-10 | SAMN12253937 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Origma solitaria | GCA_013397895.1_ASM1339789v1 | 1,033,410,747 | 12,172 | 1.26M (228) | 99.12K (2,947) | 720586 | 2020-07-10 | SAMN12253952 | PRJNA545868 | B10K Consortium | birds | ||
| varied sittella | Daphoenositta chrysoptera | GCA_013397915.1_ASM1339791v1 | 1,033,680,849 | 18,800 | 804.29K (373) | 79.48K (3,749) | 254528 | 2020-07-10 | SAMN12253948 | PRJNA545868 | B10K Consortium | birds | ||
| rufous bristle-bird | Dasyornis broadbenti | GCA_013397935.1_ASM1339793v1 | 1,024,798,037 | 11,464 | 1.42M (192) | 67.80K (4,566) | 243059 | 2020-07-10 | SAMN12253949 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Grantiella picta | GCA_013397955.1_ASM1339795v1 | 1,014,521,746 | 15,742 | 1.13M (252) | 100.62K (2,887) | VU | 266360 | 2020-07-10 | SAMN12253950 | PRJNA545868 | B10K Consortium | birds | |
| birds | Machaerirhynchus nigripectus | GCA_013397975.1_ASM1339797v1 | 1,044,536,230 | 18,919 | 998.13K (295) | 76.53K (3,824) | 1160894 | 2020-07-10 | SAMN12253945 | PRJNA545868 | B10K Consortium | birds | ||
| Red-winged fairywren | Malurus elegans | GCA_013397995.1_ASM1339799v1 | 1,013,601,814 | 37,339 | 458.14K (575) | 74.07K (3,743) | 720584 | 2020-07-10 | SAMN12253946 | PRJNA545868 | B10K Consortium | birds | ||
| tit berrypecker | Oreocharis arfaki | GCA_013398015.1_ASM1339801v1 | 1,039,561,598 | 27,748 | 636.48K (453) | 109.60K (2,761) | 979223 | 2020-07-10 | SAMN12253944 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Panurus biarmicus | GCA_013398035.1_ASM1339803v1 | 919,078,602 | 25,824 | 121.82K (1,804) | 18.92K (12,685) | 181101 | 2020-07-10 | SAMN12253962 | PRJNA545868 | B10K Consortium | birds | ||
| blue-capped ifrita | Ifrita kowaldi | GCA_013398055.1_ASM1339805v1 | 1,041,499,962 | 26,084 | 424.49K (692) | 103.03K (2,961) | 461245 | 2020-07-10 | SAMN12253943 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Notiomystis cincta | GCA_013398075.1_ASM1339807v1 | 1,025,225,744 | 38,987 | 154.20K (1,808) | 50.12K (5,771) | VU | 366454 | 2020-07-10 | SAMN12253957 | PRJNA545868 | B10K Consortium | birds | |
| kagu | Rhynochetos jubatus | GCA_013398095.1_ASM1339809v1 | 1,116,409,996 | 13,191 | 965.07K (317) | 91.15K (3,370) | EN | 54386 | 2020-07-10 | SAMN12253954 | PRJNA545868 | B10K Consortium | birds | |
| Eastern shriketit | Falcunculus frontatus | GCA_013398115.1_ASM1339811v1 | 1,042,685,034 | 23,443 | 1.19M (238) | 150.46K (2,033) | 254539 | 2020-07-10 | SAMN12253959 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Aegotheles bennettii | GCA_013398125.1_ASM1339812v1 | 1,089,119,258 | 25,868 | 324.81K (838) | 65.83K (4,457) | 48278 | 2020-07-10 | SAMN12253958 | PRJNA545868 | B10K Consortium | birds | ||
| plains-wanderer | Pedionomus torquatus | GCA_013398155.1_ASM1339815v1 | 1,134,620,722 | 39,814 | 254.65K (1,151) | 36.85K (8,254) | CR | 227192 | 2020-07-10 | SAMN12253960 | PRJNA545868 | B10K Consortium | birds | |
| rufous treecreeper | Climacteris rufus | GCA_013398175.1_ASM1339817v1 | 1,058,972,301 | 15,302 | 863.00K (332) | 72.43K (4,213) | 47695 | 2020-07-10 | SAMN12253953 | PRJNA545868 | B10K Consortium | birds | ||
| Nicobar pigeon | Caloenas nicobarica | GCA_013398195.1_ASM1339819v1 | 1,025,545,389 | 3,685 | 20.89M (16) | 72.34K (4,147) | 187106 | 2020-07-10 | SAMN12253981 | PRJNA545868 | B10K Consortium | birds | ||
| song sparrow | Melospiza melodia (4) | GCA_013398205.1_ASM1339820v1 | 1,061,250,996 | 6,043 | 9.24M (32) | 181.10K (1,688) | 44397 | 2020-07-10 | B10K Consortium | birds | ||||
| oilbird | Steatornis caripensis | GCA_013398225.1_ASM1339822v1 | 1,222,770,580 | 47,435 | 306.64K (1,128) | 38.02K (9,260) | 48435 | 2020-07-10 | SAMN12253980 | PRJNA545868 | B10K Consortium | birds | ||
| Cape sugarbird | Promerops cafer | GCA_013398275.1_ASM1339827v1 | 1,043,743,207 | 27,395 | 1.18M (239) | 128.26K (2,307) | 254652 | 2020-07-10 | SAMN12253977 | PRJNA545868 | B10K Consortium | birds | ||
| black-faced sheathbill | Chionis minor | GCA_013398295.1_ASM1339829v1 | 1,174,003,224 | 17,903 | 592.38K (549) | 128.43K (2,636) | 227182 | 2020-07-10 | SAMN12253976 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Nothoprocta pentlandii | GCA_013398315.1_ASM1339831v1 | 984,657,498 | 5,076 | 1.10M (247) | 45.20K (5,984) | 2585814 | 2020-07-10 | SAMN12253975 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Nothoprocta ornata | GCA_013398335.1_ASM1339833v1 | 978,286,010 | 4,116 | 3.79M (80) | 47.31K (5,659) | 83376 | 2020-07-10 | SAMN12253974 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Nothocercus nigrocapillus | GCA_013398345.1_ASM1339834v1 | 1,019,611,718 | 6,429 | 2.65M (107) | 31.01K (9,059) | 1977171 | 2020-07-10 | SAMN12253973 | PRJNA545868 | B10K Consortium | birds | ||
| scrub jay | Aphelocoma coerulescens | GCA_013398375.1_ASM1339837v1 | 1,060,855,343 | 1,701 | 7.63M (42) | 133.62K (2,227) | VU | 39617 | 2020-07-10 | SAMN12253992 | PRJNA545868 | B10K Consortium | birds | |
| European robin | Erithacus rubecula (5) | GCA_013398395.1_ASM1339839v1 | 979,843,765 | 2,673 | 2.96M (90) | 73.14K (3,855) | 37610 | 2020-07-10 | SAMN12253986 | PRJNA545868 | B10K Consortium | birds | ||
| European robin | Erithacus rubecula (5) | GCA_903797565.2_bEriRub2.2_alternate_haplotype | 912,720,829 | 3,668 | 603.22K (405) | 602.37K (405) | 37610 | 2021-03-21 | SAMEA4760689 | PRJEB38657 | Wellcome Sanger Institute | birds | ||
| view | European robin | Erithacus rubecula (5) | GCA_903797595.2_bEriRub2.2 | 1,086,738,418 | 1,119 | 60.68M (6) | 5.59M (52) | 37610 | 2021-05-03 | SAMEA4760689 | PRJEB38658 | Wellcome Sanger Institute | birds | |
| European robin | Erithacus rubecula (5) | GCA_903797565.1_bEriRub2.1_alternate_haplotype | 912,720,829 | 3,668 | 603.22K (405) | 602.37K (405) | 37610 | 2020-06-11 | SC | birds | ||||
| European robin | Erithacus rubecula (5) | GCA_903797595.1_bEriRub2.1 | 1,086,738,318 | 1,120 | 46.56M (7) | 5.59M (52) | 37610 | 2020-06-27 | SC | birds | ||||
| birds | Pheucticus melanocephalus | GCA_013398405.1_ASM1339840v1 | 1,048,530,562 | 44,782 | 697.37K (344) | 57.80K (4,979) | 371919 | 2020-07-10 | SAMN12253988 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Loxia curvirostra | GCA_013398455.1_ASM1339845v1 | 1,028,271,095 | 15,776 | 3.12M (90) | 211.35K (1,412) | 64802 | 2020-07-10 | SAMN12253984 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Asarcornis scutulata | GCA_013398475.1_ASM1339847v1 | 1,117,983,497 | 9,138 | 5.64M (63) | 91.21K (3,398) | EN | 75869 | 2020-07-10 | SAMN12254003 | PRJNA545868 | B10K Consortium | birds | |
| birds | Vidua chalybeata | GCA_013398495.1_ASM1339849v1 | 1,073,584,019 | 3,351 | 916.47K (350) | 387.57K (812) | 81927 | 2020-07-10 | SAMN12254000 | PRJNA545868 | B10K Consortium | birds | ||
| white-breasted antbird | Rhegmatorhina hoffmannsi (2) | GCA_013398505.2_LSU_RhHo_2.0 | 1,066,555,733 | 8,943 | 72.80M (5) | 24.64K (11,448) | 468512 | 2021-04-30 | SAMN12253983 | PRJNA669390 | Louisiana State University | birds | ||
| white-breasted antbird | Rhegmatorhina hoffmannsi (2) | GCA_013398505.1_ASM1339850v1 | 951,650,392 | 2,328 | 11.81M (25) | 73.81K (3,419) | 468512 | 2020-07-10 | B10K Consortium | birds | ||||
| red-winged blackbird | Agelaius phoeniceus (2) | GCA_013398535.1_ASM1339853v1 | 1,086,309,140 | 42,265 | 1.69M (166) | 78.38K (3,691) | 39638 | 2020-07-10 | SAMN12254002 | PRJNA545868 | B10K Consortium | birds | ||
| red-winged blackbird | Agelaius phoeniceus (2) | GCA_020745825.1_ASM2074582v1 | 1,188,529,604 | 417 | 36.44M (8) | 22.83M (13) | 39638 | 2021-11-05 | SAMN19590559 | PRJNA735624 | Brood Parasitic Bird Genomes Consortium | birds | ||
| Eurasian tree-creeper | Certhia familiaris | GCA_013398575.1_ASM1339857v1 | 1,066,430,070 | 30,287 | 857.73K (322) | 48.85K (5,916) | 73333 | 2020-07-10 | SAMN12253998 | PRJNA545868 | B10K Consortium | birds | ||
| Karoo scrub-robin | Cercotrichas coryphoeus | GCA_013398595.1_ASM1339859v1 | 1,029,849,930 | 6,008 | 954.95K (307) | 55.39K (4,929) | 614051 | 2020-07-10 | SAMN12253994 | PRJNA545868 | B10K Consortium | birds | ||
| black-headed bulbul | Brachypodius atriceps | GCA_013398615.1_ASM1339861v1 | 906,727,256 | 3,820 | 17.54M (14) | 85.41K (2,961) | 182895 | 2020-07-10 | SAMN12253996 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Copsychus sechellarum | GCA_013398635.1_ASM1339863v1 | 1,052,094,435 | 4,021 | 11.09M (30) | 109.08K (2,461) | EN | 797021 | 2020-07-10 | SAMN12254010 | PRJNA545868 | B10K Consortium | birds | |
| great reed warbler | Acrocephalus arundinaceus (2) | GCA_013398685.1_ASM1339868v1 | 1,184,245,996 | 29,468 | 336.46K (932) | 92.56K (3,034) | 39621 | 2020-07-10 | SAMN12254005 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Nesospiza acunhae | GCA_013398715.1_ASM1339871v1 | 1,055,288,411 | 15,602 | 1.03M (273) | 38.57K (7,691) | VU | 381881 | 2020-07-10 | SAMN12254004 | PRJNA545868 | B10K Consortium | birds | |
| birds | Nothocercus julius | GCA_013398735.1_ASM1339873v1 | 1,019,400,681 | 4,965 | 4.06M (66) | 37.65K (7,499) | 2585813 | 2020-07-10 | SAMN12253972 | PRJNA545868 | B10K Consortium | birds | ||
| broad-billed sapayoa | Sapayoa aenigma | GCA_013398745.1_ASM1339874v1 | 1,015,910,493 | 9,986 | 363.56K (669) | 60.16K (4,701) | 239371 | 2020-07-10 | SAMN12253965 | PRJNA545868 | B10K Consortium | birds | ||
| spotted wren-babbler | Elachura formosa | GCA_013398795.1_ASM1339879v1 | 1,013,707,244 | 9,456 | 1.15M (202) | 43.16K (6,397) | 1463973 | 2020-07-10 | SAMN12253967 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Ibidorhyncha struthersii | GCA_013398815.1_ASM1339881v1 | 1,198,770,542 | 22,425 | 514.62K (639) | 64.86K (5,030) | 425643 | 2020-07-10 | SAMN12253964 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Emberiza fucata | GCA_013398835.1_ASM1339883v1 | 1,032,579,516 | 11,220 | 892.25K (284) | 19.69K (13,801) | 337179 | 2020-07-10 | SAMN12253922 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Mohoua ochrocephala | GCA_013398855.1_ASM1339885v1 | 1,038,537,151 | 46,774 | 206.78K (1,306) | 54.22K (5,185) | EN | 874463 | 2020-07-10 | SAMN12253963 | PRJNA545868 | B10K Consortium | birds | |
| birds | Prunella himalayana | GCA_013398875.1_ASM1339887v1 | 1,024,611,247 | 5,623 | 1.82M (161) | 38.30K (7,593) | 670356 | 2020-07-10 | SAMN12253920 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Dromas ardeola | GCA_013398915.1_ASM1339891v1 | 1,192,853,411 | 37,562 | 314.17K (1,019) | 40.99K (7,867) | 458190 | 2020-07-10 | SAMN12253915 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Ceuthmochares aereus | GCA_013398935.1_ASM1339893v1 | 1,120,248,821 | 29,877 | 163.03K (1,803) | 29.27K (10,135) | 1961834 | 2020-07-10 | SAMN12253749 | PRJNA545868 | B10K Consortium | birds | ||
| North Island kokako | Callaeas wilsoni | GCA_013398955.1_ASM1339895v1 | 1,047,533,504 | 40,841 | 133.03K (2,106) | 118.43K (2,384) | 1347786 | 2020-07-10 | SAMN12253743 | PRJNA545868 | B10K Consortium | birds | ||
| veery | Catharus fuscescens | GCA_013398975.1_ASM1339897v1 | 1,041,802,491 | 65,695 | 276.33K (910) | 56.06K (5,037) | 159581 | 2020-07-10 | SAMN12253775 | PRJNA545868 | B10K Consortium | birds | ||
| Asian short-toed lark | Alaudala cheleensis | GCA_013398995.1_ASM1339899v1 | 1,069,224,903 | 65,586 | 398.82K (669) | 96.77K (2,887) | 670337 | 2020-07-10 | SAMN12253773 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Galbula dea | GCA_013399015.1_ASM1339901v1 | 1,006,681,283 | 19,989 | 1.18M (209) | 251.17K (1,016) | 1109041 | 2020-07-10 | SAMN12253812 | PRJNA545868 | B10K Consortium | birds | ||
| Great-tailed grackle | Quiscalus mexicanus | GCA_013399035.1_ASM1339903v1 | 1,041,398,572 | 56,227 | 93.22K (2,950) | 60.53K (4,536) | 64278 | 2020-07-10 | SAMN12253789 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Ramphastos sulfuratus | GCA_013399055.1_ASM1339905v1 | 1,176,906,612 | 95,483 | 85.98K (3,155) | 38.62K (7,205) | 322582 | 2020-07-10 | SAMN12253788 | PRJNA545868 | B10K Consortium | birds | ||
| American pygmy kingfisher | Chloroceryle aenea | GCA_013399075.1_ASM1339907v1 | 1,062,127,307 | 23,709 | 324.84K (910) | 34.84K (8,070) | 176938 | 2020-07-10 | SAMN12253811 | PRJNA545868 | B10K Consortium | birds | ||
| common trumpeter | Psophia crepitans | GCA_013399095.1_ASM1339909v1 | 1,169,253,548 | 14,465 | 468.89K (628) | 58.16K (5,667) | 54359 | 2020-07-10 | SAMN12253810 | PRJNA545868 | B10K Consortium | birds | ||
| magpie goose | Anseranas semipalmata | GCA_013399115.1_ASM1339911v1 | 1,131,429,283 | 11,789 | 628.31K (504) | 53.21K (6,016) | 8851 | 2020-07-10 | SAMN12253809 | PRJNA545868 | B10K Consortium | birds | ||
| sungrebe | Heliornis fulica | GCA_013399135.1_ASM1339913v1 | 1,097,085,761 | 31,355 | 389.53K (735) | 53.46K (5,448) | 54369 | 2020-07-10 | SAMN12253807 | PRJNA545868 | B10K Consortium | birds | ||
| marbled wood quail | Odontophorus gujanensis | GCA_013399175.1_ASM1339917v1 | 977,719,362 | 26,662 | 343.79K (781) | 74.58K (3,724) | 886794 | 2020-07-10 | SAMN12253806 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Dicrurus megarhynchus | GCA_013399195.1_ASM1339919v1 | 1,051,520,678 | 47,015 | 1.07M (274) | 143.78K (2,115) | 450177 | 2020-07-10 | SAMN12253804 | PRJNA545868 | B10K Consortium | birds | ||
| black hawk-eagle | Spizaetus tyrannus | GCA_013399215.1_ASM1339921v1 | 1,184,661,130 | 3,422 | 1.50M (236) | 72.45K (4,785) | 252798 | 2020-07-10 | SAMN12253891 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Rhipidura dahli | GCA_013399225.1_ASM1339922v1 | 1,019,433,115 | 14,637 | 789.31K (359) | 98.06K (3,089) | 667186 | 2020-07-10 | SAMN12253805 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Ciconia maguari (3) | GCA_013399255.1_ASM1339925v1 | 1,200,886,088 | 33,984 | 367.22K (936) | 66.04K (4,991) | 52777 | 2020-07-10 | SAMN12253803 | PRJNA545868 | B10K Consortium | birds | ||
| view | birds | Ciconia maguari (3) | GCA_017639555.1_bCicMag1.pri | 1,239,437,416 | 153 | 85.55M (5) | 23.76M (18) | 52777 | 2021-03-30 | SAMN18353822 | PRJNA715733 | Vertebrate Genomes Project | birds | |
| birds | Ciconia maguari (3) | GCA_017639665.1_bCicMag1.alt | 967,599,765 | 4,278 | 345.89K (815) | 345.89K (815) | 52777 | 2021-03-30 | SAMN18353822 | PRJNA715732 | Vertebrate Genomes Project | birds | ||
| black-tailed trogon | Trogon melanurus | GCA_013399275.1_ASM1339927v1 | 1,107,860,996 | 5,788 | 600.93K (492) | 51.45K (6,117) | 56311 | 2020-07-10 | SAMN12253890 | PRJNA545868 | B10K Consortium | birds | ||
| white-winged piprites | Piprites chloris | GCA_013399295.1_ASM1339929v1 | 1,054,003,917 | 2,249 | 2.87M (107) | 75.89K (4,097) | 114369 | 2020-07-10 | SAMN12253889 | PRJNA545868 | B10K Consortium | birds | ||
| greater painted-snipe | Rostratula benghalensis | GCA_013399305.1_ASM1339930v1 | 1,103,097,556 | 3,517 | 3.40M (86) | 78.72K (3,899) | 118793 | 2020-07-10 | SAMN12253888 | PRJNA545868 | B10K Consortium | birds | ||
| white-bellied storm-petrel | Fregetta grallaria | GCA_013399335.1_ASM1339933v1 | 1,173,305,012 | 16,454 | 342.04K (933) | 15.82K (18,802) | 79628 | 2020-07-10 | SAMN12253887 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Herpetotheres cachinnans | GCA_013399355.1_ASM1339935v1 | 1,175,298,361 | 2,775 | 1.83M (189) | 61.77K (5,630) | 56343 | 2020-07-10 | SAMN12253885 | PRJNA545868 | B10K Consortium | birds | ||
| Western bronze ground-dove | Alopecoenas beccarii | GCA_013399365.1_ASM1339936v1 | 1,115,608,669 | 72,610 | 674.42K (445) | 126.52K (2,483) | 262131 | 2020-07-10 | SAMN12253886 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Nyctiprogne leucopyga | GCA_013399395.1_ASM1339939v1 | 1,115,538,861 | 18,833 | 190.42K (1,513) | 28.89K (9,929) | 382315 | 2020-07-10 | SAMN12253883 | PRJNA545868 | B10K Consortium | birds | ||
| hawks & eagles | Sagittarius serpentarius | GCA_013399415.1_ASM1339941v1 | 1,139,033,624 | 61,483 | 129.67K (2,228) | 36.75K (8,200) | EN | 56258 | 2020-07-10 | SAMN12253901 | PRJNA545868 | B10K Consortium | birds | |
| ruddy turnstone | Arenaria interpres | GCA_013399435.1_ASM1339943v1 | 1,124,618,860 | 46,803 | 181.33K (1,608) | 48.25K (6,140) | 54971 | 2020-07-10 | SAMN12253884 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Anthoscopus minutus | GCA_013399455.1_ASM1339945v1 | 978,848,727 | 97,620 | 108.85K (1,976) | 49.65K (5,172) | 156561 | 2020-07-10 | SAMN12253902 | PRJNA545868 | B10K Consortium | birds | ||
| southern screamer | Chauna torquata | GCA_013399475.1_ASM1339947v1 | 1,162,596,281 | 33,560 | 232.49K (1,344) | 39.55K (7,503) | 30388 | 2020-07-10 | SAMN12253900 | PRJNA545868 | B10K Consortium | birds | ||
| grey go-away-bird | Corythaixoides concolor | GCA_013399495.1_ASM1339949v1 | 1,187,728,577 | 6,661 | 1.11M (317) | 52.68K (6,478) | 103956 | 2020-07-10 | SAMN12253899 | PRJNA545868 | B10K Consortium | birds | ||
| Green crombec | Sylvietta virens | GCA_013399515.1_ASM1339951v1 | 1,028,027,743 | 4,638 | 2.51M (100) | 33.67K (8,708) | 208069 | 2020-07-10 | SAMN12253897 | PRJNA545868 | B10K Consortium | birds | ||
| large-billed tern | Phaetusa simplex | GCA_013399535.1_ASM1339953v1 | 1,151,692,184 | 13,769 | 520.94K (633) | 16.90K (18,904) | 297813 | 2020-07-10 | SAMN12253896 | PRJNA545868 | B10K Consortium | birds | ||
| black-chested snake-eagle | Circaetus pectoralis | GCA_013399555.1_ASM1339955v1 | 1,183,443,218 | 4,190 | 1.30M (270) | 28.95K (11,774) | 321084 | 2020-07-10 | SAMN12253898 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Podilymbus podiceps | GCA_013399565.1_ASM1339956v1 | 1,197,106,122 | 6,096 | 692.27K (482) | 35.81K (9,685) | 9252 | 2020-07-10 | SAMN12253895 | PRJNA545868 | B10K Consortium | birds | ||
| ferruginous pygmy-owl | Glaucidium brasilianum | GCA_013399595.1_ASM1339959v1 | 1,170,141,437 | 3,579 | 1.60M (197) | 74.99K (4,487) | 78217 | 2020-07-10 | SAMN12253894 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Amazona guildingii | GCA_013399615.1_ASM1339961v1 | 1,133,570,109 | 29,878 | 275.65K (1,068) | 61.01K (4,908) | VU | 175529 | 2020-07-10 | SAMN12253802 | PRJNA545868 | B10K Consortium | birds | |
| lesser nighthawk | Chordeiles acutipennis | GCA_013399635.1_ASM1339963v1 | 1,172,521,041 | 9,595 | 630.21K (480) | 40.73K (7,901) | 118183 | 2020-07-10 | SAMN12253893 | PRJNA545868 | B10K Consortium | birds | ||
| Kirtland's warbler | Setophaga kirtlandii | GCA_013399655.1_ASM1339965v1 | 1,045,879,602 | 44,254 | 583.16K (450) | 77.44K (3,499) | 298831 | 2020-07-10 | SAMN12253801 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Mesembrinibis cayennensis | GCA_013399675.1_ASM1339967v1 | 1,196,180,878 | 39,979 | 482.80K (661) | 85.10K (3,887) | 1118748 | 2020-07-10 | SAMN12253800 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Formicarius rufipectus | GCA_013399695.1_ASM1339969v1 | 1,044,275,471 | 11,327 | 836.58K (316) | 79.41K (3,672) | 1118560 | 2020-07-10 | SAMN12253799 | PRJNA545868 | B10K Consortium | birds | ||
| australian brush-turkey | Alectura lathami | GCA_013399715.1_ASM1339971v1 | 1,043,215,352 | 37,168 | 229.40K (1,266) | 18.43K (14,677) | 81907 | 2020-07-10 | SAMN12253796 | PRJNA545868 | B10K Consortium | birds | ||
| Fork-tailed flycatcher | Tyrannus savana | GCA_013399735.1_ASM1339973v1 | 1,055,499,921 | 35,393 | 436.18K (672) | 72.32K (4,130) | 137541 | 2020-07-10 | SAMN12253795 | PRJNA545868 | B10K Consortium | birds | ||
| tawny frogmouth | Podargus strigoides | GCA_013399755.1_ASM1339975v1 | 1,138,406,061 | 158,535 | 176.12K (1,502) | 80.64K (3,567) | 8905 | 2020-07-10 | SAMN12253797 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Semnornis frantzii | GCA_013399775.1_ASM1339977v1 | 1,068,132,104 | 249,644 | 16.36K (14,260) | 8.61K (29,459) | 91796 | 2020-07-10 | SAMN12253798 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Zosterops hypoxanthus | GCA_013399795.1_ASM1339979v1 | 1,051,741,454 | 58,495 | 306.04K (858) | 48.04K (6,087) | 2485327 | 2020-07-10 | SAMN12253794 | PRJNA545868 | B10K Consortium | birds | ||
| Barn swallow | Hirundo rustica (8) | GCA_013399815.1_ASM1339981v1 | 1,043,753,555 | 13,084 | 675.77K (409) | 119.85K (2,361) | 43150 | 2020-07-10 | SAMN12253817 | PRJNA545868 | B10K Consortium | birds | ||
| Barn swallow | Hirundo rustica (8) | GCA_015227805.3_bHirRus1.pri.v3 | 1,105,955,550 | 617 | 76.19M (5) | 2.79M (100) | 43150 | 2021-11-30 | SAMN14675488 | PRJNA636192 | Vertebrate Genomes Project | birds | ||
| Barn swallow | Hirundo rustica (8) | GCA_015227815.3_bHirRus1.alt.v3 | 936,032,861 | 2,476 | 992.69K (253) | 992.69K (253) | 43150 | 2021-11-24 | SAMN14675488 | PRJNA636191 | Vertebrate Genomes Project | birds | ||
| view | Barn swallow | Hirundo rustica (8) | GCF_015227805.1_bHirRus1.pri.v2 | 1,105,955,550 | 617 | 76.19M (5) | 2.79M (100) | 43150 | 2021-03-02 | SAMN14675488 | PRJNA636192 | Vertebrate Genomes Project | birds | |
| Barn swallow | Hirundo rustica (8) | GCA_015227805.1_bHirRus1.pri | 1,104,070,652 | 578 | 76.19M (5) | 2.79M (100) | 43150 | 2020-11-05 | Vertebrate Genomes Project | birds | ||||
| view | Barn swallow | Hirundo rustica (8) | GCA_015227805.2_bHirRus1.pri.v2 | 1,105,955,550 | 617 | 76.19M (5) | 2.79M (100) | 43150 | 2021-03-02 | Vertebrate Genomes Project | birds | |||
| birds | Leptocoma aspasia | GCA_013399835.1_ASM1339983v1 | 1,035,751,609 | 13,985 | 743.44K (377) | 89.25K (3,258) | 2585812 | 2020-07-10 | SAMN12253793 | PRJNA545868 | B10K Consortium | birds | ||
| sharpbill | Oxyruncus cristatus | GCA_013399855.1_ASM1339985v1 | 1,062,467,484 | 12,532 | 1.14M (260) | 75.75K (4,045) | 114331 | 2020-07-10 | SAMN12253832 | PRJNA545868 | B10K Consortium | birds | ||
| Australian magpie | Gymnorhina tibicen | GCA_013399875.1_ASM1339987v1 | 1,052,262,442 | 18,986 | 1.19M (239) | 140.54K (2,040) | 9132 | 2020-07-10 | SAMN12253831 | PRJNA545868 | B10K Consortium | birds | ||
| silver-breasted broadbill | Serilophus lunatus | GCA_013399895.1_ASM1339989v1 | 1,040,370,003 | 11,249 | 848.51K (322) | 89.89K (3,284) | 239386 | 2020-07-10 | SAMN12253830 | PRJNA545868 | B10K Consortium | birds | ||
| blackcap illadopsis | Illadopsis cleaveri | GCA_013399915.1_ASM1339991v1 | 1,054,200,279 | 43,982 | 377.15K (695) | 45.42K (6,221) | 201329 | 2020-07-10 | SAMN12253828 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Cinclus mexicanus | GCA_013399935.1_ASM1339993v1 | 996,999,814 | 62,831 | 213.30K (1,163) | 44.27K (5,853) | 161649 | 2020-07-10 | SAMN12253825 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Ploceus nigricollis | GCA_013399945.1_ASM1339994v1 | 1,035,454,922 | 24,469 | 730.14K (398) | 74.00K (3,882) | 441696 | 2020-07-10 | SAMN12253827 | PRJNA545868 | B10K Consortium | birds | ||
| spotted honeyguide | Indicator maculatus | GCA_013399975.1_ASM1339997v1 | 1,127,548,528 | 28,161 | 462.55K (596) | 65.22K (4,400) | 545262 | 2020-07-10 | SAMN12253826 | PRJNA545868 | B10K Consortium | birds | ||
| Northern wheatear | Oenanthe oenanthe | GCA_013399995.1_ASM1339999v1 | 1,001,836,003 | 33,311 | 507.91K (529) | 45.00K (6,235) | 279966 | 2020-07-10 | SAMN12253823 | PRJNA545868 | B10K Consortium | birds | ||
| garden warbler | Sylvia borin (3) | GCA_013400015.1_ASM1340001v1 | 1,036,635,967 | 31,497 | 729.73K (364) | 55.51K (5,095) | 73324 | 2020-07-10 | SAMN12253842 | PRJNA545868 | B10K Consortium | birds | ||
| view | garden warbler | Sylvia borin (3) | GCA_014839755.1_bSylBor1.pri | 1,045,652,180 | 176 | 72.75M (5) | 31.91M (10) | 73324 | 2020-10-02 | SAMN12618613 | PRJNA561945 | Vertebrate Genomes Project | birds | |
| garden warbler | Sylvia borin (3) | GCA_014839765.1_bSylBor1.alt | 1,032,649,170 | 775 | 4.69M (62) | 73324 | 2020-09-30 | SAMN12618613 | PRJNA561946 | Vertebrate Genomes Project | birds | |||
| black skimmer | Rynchops niger | GCA_013400035.1_ASM1340003v1 | 1,178,085,471 | 17,494 | 523.07K (630) | 57.55K (5,700) | 227184 | 2020-07-10 | SAMN12253840 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Nycticryphes semicollaris | GCA_013400055.1_ASM1340005v1 | 1,126,083,395 | 16,096 | 702.73K (463) | 74.12K (4,199) | 227226 | 2020-07-10 | SAMN12253838 | PRJNA545868 | B10K Consortium | birds | ||
| icterine warbler | Hippolais icterina | GCA_013400075.1_ASM1340007v1 | 1,048,398,027 | 51,503 | 494.14K (531) | 64.76K (4,496) | 68497 | 2020-07-10 | SAMN12253841 | PRJNA545868 | B10K Consortium | birds | ||
| black-winged stilt | Himantopus himantopus | GCA_013400095.1_ASM1340009v1 | 1,196,502,159 | 23,765 | 712.82K (467) | 79.25K (4,206) | 225398 | 2020-07-10 | SAMN12253837 | PRJNA545868 | B10K Consortium | birds | ||
| common scimitar-bill | Rhinopomastus cyanomelas | GCA_013400115.1_ASM1340011v1 | 994,785,294 | 21,664 | 415.86K (614) | 114.80K (2,224) | 113115 | 2020-07-10 | SAMN12253851 | PRJNA545868 | B10K Consortium | birds | ||
| double-banded courser | Rhinoptilus africanus | GCA_013400135.1_ASM1340013v1 | 1,154,870,122 | 30,346 | 382.64K (830) | 52.92K (6,059) | 240209 | 2020-07-10 | SAMN12253852 | PRJNA545868 | B10K Consortium | birds | ||
| Middendorff's grasshopper-warbler | Locustella ochotensis | GCA_013400155.1_ASM1340015v1 | 1,039,556,136 | 10,795 | 653.74K (427) | 58.27K (5,062) | 187437 | 2020-07-10 | SAMN12253834 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Phainopepla nitens | GCA_013400175.1_ASM1340017v1 | 1,027,439,719 | 28,278 | 542.91K (491) | 74.32K (3,649) | 161653 | 2020-07-10 | SAMN12253850 | PRJNA545868 | B10K Consortium | birds | ||
| limpkin | Aramus guarauna | GCA_013400195.1_ASM1340019v1 | 1,170,510,309 | 18,527 | 810.61K (384) | 62.98K (5,294) | 54356 | 2020-07-10 | SAMN12253836 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Cisticola juncidis | GCA_013400215.1_ASM1340021v1 | 1,016,620,075 | 20,420 | 873.78K (314) | 74.14K (3,776) | 52622 | 2020-07-10 | SAMN12253849 | PRJNA545868 | B10K Consortium | birds | ||
| Eurasian golden-oriole | Oriolus oriolus | GCA_013400235.1_ASM1340023v1 | 1,038,866,468 | 22,076 | 716.34K (377) | 97.89K (2,896) | 181099 | 2020-07-10 | SAMN12253845 | PRJNA545868 | B10K Consortium | birds | ||
| wood nuthatch | Sitta europaea | GCA_013400255.1_ASM1340025v1 | 1,020,783,426 | 18,111 | 660.83K (428) | 79.57K (3,647) | 50251 | 2020-07-10 | SAMN12253846 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Rhadina sibilatrix | GCA_013400275.1_ASM1340027v1 | 1,045,321,485 | 50,491 | 335.19K (765) | 38.75K (7,536) | 2585818 | 2020-07-10 | SAMN12253847 | PRJNA545868 | B10K Consortium | birds | ||
| American herring gull | Larus smithsonianus | GCA_013400295.1_ASM1340029v1 | 1,174,553,315 | 117,859 | 82.25K (3,358) | 59.83K (4,770) | 243888 | 2020-07-10 | SAMN12253848 | PRJNA545868 | B10K Consortium | birds | ||
| bohemian waxwing | Bombycilla garrulus | GCA_013400315.1_ASM1340031v1 | 1,032,116,443 | 32,196 | 615.06K (436) | 64.05K (4,377) | 125297 | 2020-07-10 | SAMN12253844 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Eurystomus gularis | GCA_013400335.1_ASM1340033v1 | 1,130,134,188 | 39,629 | 197.89K (1,406) | 57.88K (5,203) | 325343 | 2020-07-10 | SAMN12253862 | PRJNA545868 | B10K Consortium | birds | ||
| short-toed tree-creeper | Certhia brachydactyla | GCA_013400355.1_ASM1340035v1 | 1,028,791,262 | 13,655 | 865.39K (326) | 76.32K (3,956) | 73330 | 2020-07-10 | SAMN12253843 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Thinocorus orbignyianus | GCA_013400375.1_ASM1340037v1 | 1,092,410,525 | 15,363 | 845.40K (352) | 75.63K (4,125) | 161742 | 2020-07-10 | SAMN12253858 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Vidua macroura | GCA_013400395.1_ASM1340039v1 | 1,024,457,306 | 93,444 | 170.49K (1,337) | 37.79K (6,839) | 187451 | 2020-07-10 | SAMN12253861 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Scytalopus superciliaris | GCA_013400415.1_ASM1340041v1 | 1,061,776,118 | 17,518 | 632.02K (439) | 60.03K (4,863) | 312124 | 2020-07-10 | SAMN12253857 | PRJNA545868 | B10K Consortium | birds | ||
| red-whiskered bulbul | Pycnonotus jocosus | GCA_013400435.1_ASM1340043v1 | 1,024,591,993 | 60,582 | 218.12K (1,126) | 53.85K (5,218) | 182897 | 2020-07-10 | SAMN12253855 | PRJNA545868 | B10K Consortium | birds | ||
| red-billed leiothrix | Leiothrix lutea | GCA_013400445.1_ASM1340044v1 | 1,058,758,629 | 17,003 | 297.51K (918) | 27.76K (9,636) | 36275 | 2020-07-10 | SAMN12253856 | PRJNA545868 | B10K Consortium | birds | ||
| pied barbet | Tricholaema leucomelas | GCA_013400475.1_ASM1340047v1 | 1,236,242,119 | 65,168 | 294.02K (897) | 77.27K (3,449) | 240729 | 2020-07-10 | SAMN12253853 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Nicator chloris | GCA_013400495.1_ASM1340049v1 | 1,040,737,262 | 153,465 | 99.49K (2,181) | 56.50K (4,391) | 237433 | 2020-07-10 | SAMN12253854 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Erpornis zantholeuca | GCA_013400515.1_ASM1340051v1 | 1,013,967,273 | 89,074 | 176.06K (1,323) | 45.33K (5,671) | 1112836 | 2020-07-10 | SAMN12253868 | PRJNA545868 | B10K Consortium | birds | ||
| hamerkop | Scopus umbretta | GCA_013400535.1_ASM1340053v1 | 1,091,975,655 | 239,406 | 32.36K (8,733) | 16.16K (18,282) | 33581 | 2020-07-10 | SAMN12253872 | PRJNA545868 | B10K Consortium | birds | ||
| wattled jacana | Jacana jacana | GCA_013400555.1_ASM1340055v1 | 1,085,086,281 | 92,876 | 126.63K (1,928) | 31.22K (8,491) | 54508 | 2020-07-10 | SAMN12253869 | PRJNA545868 | B10K Consortium | birds | ||
| olive warbler | Peucedramus taeniatus | GCA_013400575.1_ASM1340057v1 | 1,037,528,998 | 52,207 | 183.86K (1,345) | 61.98K (4,403) | 135441 | 2020-07-10 | SAMN12253863 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Chloropsis cyanopogon | GCA_013400585.1_ASM1340058v1 | 985,401,841 | 91,329 | 106.72K (2,109) | 24.72K (9,887) | 1218682 | 2020-07-10 | SAMN12253867 | PRJNA545868 | B10K Consortium | birds | ||
| Pallas's sandgrouse | Syrrhaptes paradoxus | GCA_013400615.1_ASM1340061v1 | 1,101,528,155 | 215,209 | 83.87K (3,374) | 33.03K (8,596) | 302527 | 2020-07-10 | SAMN12253880 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Hypocryptadius cinnamomeus | GCA_013400635.1_ASM1340063v1 | 854,293,167 | 214,600 | 39.50K (5,137) | 23.46K (8,839) | 589841 | 2020-07-10 | SAMN12253877 | PRJNA545868 | B10K Consortium | birds | ||
| Crossley's babbler | Mystacornis crossleyi | GCA_013400655.1_ASM1340065v1 | 1,116,797,458 | 247,908 | 36.39K (7,689) | 10.65K (22,560) | 98133 | 2020-07-10 | SAMN12253876 | PRJNA545868 | B10K Consortium | birds | ||
| white-throated Oxylabes | Oxylabes madagascariensis | GCA_013400675.1_ASM1340067v1 | 1,199,250,113 | 388,344 | 17.02K (15,389) | 3.53K (45,029) | 98144 | 2020-07-10 | SAMN12253875 | PRJNA545868 | B10K Consortium | birds | ||
| wattled asity | Neodrepanis coruscans | GCA_013400695.1_ASM1340069v1 | 1,024,462,016 | 352,748 | 18.84K (12,910) | 7.05K (25,954) | 254563 | 2020-07-10 | SAMN12253874 | PRJNA545868 | B10K Consortium | birds | ||
| Brown accentor | Prunella fulvescens | GCA_013400715.1_ASM1340071v1 | 1,044,257,540 | 75,221 | 121.88K (2,212) | 26.70K (9,789) | 670355 | 2020-07-10 | SAMN12253912 | PRJNA545868 | B10K Consortium | birds | ||
| chestnut-crowned babbler | Pomatostomus ruficeps | GCA_013400735.1_ASM1340073v1 | 1,020,560,999 | 126,485 | 71.94K (3,180) | 34.78K (7,407) | 9176 | 2020-07-10 | SAMN12253873 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Pelecanoides urinatrix | GCA_013400755.1_ASM1340075v1 | 1,205,479,880 | 51,720 | 250.26K (1,346) | 93.91K (3,517) | 37079 | 2020-07-10 | SAMN12253911 | PRJNA545868 | B10K Consortium | birds | ||
| Rufous rock-jumper | Chaetops frenatus | GCA_013400775.1_ASM1340077v1 | 1,065,444,583 | 64,684 | 250.30K (1,016) | 34.66K (7,399) | 221966 | 2020-07-10 | SAMN12253910 | PRJNA545868 | B10K Consortium | birds | ||
| magellanic plover | Pluvianellus socialis | GCA_013400795.1_ASM1340079v1 | 1,185,839,265 | 52,986 | 121.95K (2,678) | 48.63K (6,698) | 227228 | 2020-07-10 | SAMN12253906 | PRJNA545868 | B10K Consortium | birds | ||
| lesser coucal | Centropus bengalensis | GCA_013400815.1_ASM1340081v1 | 1,015,638,883 | 9,447 | 1.15M (243) | 34.95K (7,948) | 1463675 | 2020-07-10 | SAMN12253924 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Zapornia atra | GCA_013400835.1_ASM1340083v1 | 1,119,122,118 | 58,849 | 134.19K (2,049) | 44.13K (6,609) | VU | 2585822 | 2020-07-10 | SAMN12253903 | PRJNA545868 | B10K Consortium | birds | |
| red-billed oxpecker | Buphagus erythrorhynchus | GCA_013400855.1_ASM1340085v1 | 1,040,192,226 | 267,835 | 37.41K (6,720) | 13.22K (17,778) | 245048 | 2020-07-10 | SAMN12253904 | PRJNA545868 | B10K Consortium | birds | ||
| African darter | Anhinga rufa | GCA_013400875.1_ASM1340087v1 | 1,014,091,971 | 249,520 | 16.99K (14,951) | 12.30K (20,406) | 317792 | 2020-07-10 | SAMN12253935 | PRJNA545868 | B10K Consortium | birds | ||
| Atlantic yellow-nosed albatross | Thalassarche chlororhynchos | GCA_013400895.1_ASM1340089v1 | 1,087,776,125 | 130,514 | 47.77K (5,031) | 23.40K (11,414) | EN | 54017 | 2020-07-10 | SAMN12253934 | PRJNA545868 | B10K Consortium | birds | |
| spotted pardalote | Pardalotus punctatus | GCA_013400915.1_ASM1340091v1 | 1,032,444,361 | 51,095 | 306.81K (826) | 83.17K (3,334) | 254575 | 2020-07-10 | SAMN12253951 | PRJNA545868 | B10K Consortium | birds | ||
| Little buttonquail | Turnix velox | GCA_013400935.1_ASM1340093v1 | 968,890,544 | 70,421 | 151.07K (1,481) | 44.03K (5,616) | 2529409 | 2020-07-10 | SAMN12253947 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Drymodes brunneopygia | GCA_013400955.1_ASM1340095v1 | 1,058,966,521 | 104,345 | 443.36K (565) | 79.91K (3,314) | 626378 | 2020-07-10 | SAMN12253961 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Atrichornis clamosus | GCA_013400975.1_ASM1340097v1 | 1,047,502,076 | 31,606 | 147.59K (2,018) | 125.28K (2,381) | EN | 449594 | 2020-07-10 | SAMN12253955 | PRJNA545868 | B10K Consortium | birds | |
| birds | Oreotrochilus melanogaster | GCA_013400995.1_ASM1340099v1 | 1,107,792,040 | 56,054 | 167.85K (1,832) | 7.68K (37,300) | 689266 | 2020-07-10 | SAMN12253978 | PRJNA545868 | B10K Consortium | birds | ||
| black-legged kittiwake | Rissa tridactyla | GCA_013401015.1_ASM1340101v1 | 1,192,865,200 | 53,283 | 17.65M (20) | 54.64K (6,014) | VU | 75485 | 2020-07-10 | SAMN12253991 | PRJNA545868 | B10K Consortium | birds | |
| birds | Horornis vulcanius | GCA_013401035.1_ASM1340103v1 | 1,223,573,813 | 408,627 | 15.43K (18,817) | 3.13K (58,833) | 2585811 | 2020-07-10 | SAMN12253956 | PRJNA545868 | B10K Consortium | birds | ||
| common murre | Uria aalge | GCA_013401055.1_ASM1340105v1 | 1,181,532,998 | 52,038 | 11.66M (33) | 23.22K (13,425) | 13746 | 2020-07-10 | SAMN12253989 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Cepphus grylle | GCA_013401065.1_ASM1340106v1 | 1,197,650,647 | 60,011 | 16.19M (23) | 39.69K (8,278) | 28697 | 2020-07-10 | SAMN12253990 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Passerina amoena | GCA_013401095.1_ASM1340109v1 | 1,068,852,817 | 57,198 | 646.72K (401) | 54.91K (5,260) | 142471 | 2020-07-10 | SAMN12253987 | PRJNA545868 | B10K Consortium | birds | ||
| Cory's shearwater | Calonectris borealis | GCA_013401115.1_ASM1340111v1 | 1,166,068,492 | 77,859 | 65.34K (4,779) | 63.03K (5,024) | 1323832 | 2020-07-10 | SAMN12253995 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Cettia cetti | GCA_013401135.1_ASM1340113v1 | 1,051,752,767 | 98,333 | 64.98K (4,548) | 62.88K (4,725) | 68486 | 2020-07-10 | SAMN12254007 | PRJNA545868 | B10K Consortium | birds | ||
| elegant woodcreeper | Xiphorhynchus elegans | GCA_013401175.1_ASM1340117v1 | 1,059,658,982 | 89,575 | 172.27K (1,706) | 62.22K (4,783) | 269412 | 2020-07-10 | SAMN12254008 | PRJNA545868 | B10K Consortium | birds | ||
| streak-breasted scimitar babbler | Pomatorhinus ruficollis | GCA_013401195.1_ASM1340119v1 | 1,065,047,492 | 15,791 | 1.26M (218) | 60.02K (4,760) | 932028 | 2020-07-10 | SAMN12253971 | PRJNA545868 | B10K Consortium | birds | ||
| Inaccessible Island rail | Atlantisia rogersi | GCA_013401215.1_ASM1340121v1 | 1,168,394,043 | 159,311 | 36.90K (8,087) | 36.14K (8,295) | 2478892 | 2020-07-10 | SAMN12254006 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Pteruthius melanotis | GCA_013401235.1_ASM1340123v1 | 1,043,915,671 | 5,183 | 1.87M (167) | 34.18K (8,726) | 357074 | 2020-07-10 | SAMN12253969 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Urocolius indicus | GCA_013401255.1_ASM1340125v1 | 1,109,599,764 | 36,428 | 261.73K (1,168) | 94.42K (3,151) | 458196 | 2020-07-10 | SAMN12253966 | PRJNA545868 | B10K Consortium | birds | ||
| osprey | Pandion haliaetus | GCA_013401275.1_ASM1340127v1 | 1,147,624,024 | 85,775 | 104.05K (2,703) | 23.45K (12,317) | 56262 | 2020-07-10 | SAMN12253917 | PRJNA545868 | B10K Consortium | birds | ||
| birds | Glareola pratincola | GCA_013401295.1_ASM1340129v1 | 1,172,993,239 | 12,282 | 411.63K (771) | 39.90K (7,986) | 43316 | 2020-07-10 | SAMN12253752 | PRJNA545868 | B10K Consortium | birds | ||
| shoebill | Balaeniceps rex | GCA_013401315.1_ASM1340131v1 | 1,181,932,130 | 121,603 | 60.45K (4,645) | 24.55K (10,066) | VU | 33584 | 2020-07-10 | SAMN12253916 | PRJNA545868 | B10K Consortium | birds | |
| short-legged ground-roller | Brachypteracias leptosomus | GCA_013401335.1_ASM1340133v1 | 1,125,912,351 | 70,974 | 130.66K (1,920) | 40.31K (6,318) | VU | 135165 | 2020-07-10 | SAMN12253914 | PRJNA545868 | B10K Consortium | birds | |
| Indigo-banded kingfisher | Ceyx cyanopectus | GCA_013401355.1_ASM1340135v1 | 1,119,293,467 | 381,577 | 25.85K (8,315) | 14.89K (14,472) | 390723 | 2020-07-10 | SAMN12253921 | PRJNA545868 | B10K Consortium | birds | ||
| chipping sparrow | Spizella passerina | GCA_013401375.1_ASM1340137v1 | 1,018,792,982 | 615,194 | 13.07K (16,698) | 9.02K (23,103) | 40210 | 2020-07-10 | SAMN12253929 | PRJNA545868 | B10K Consortium | birds | ||
| view | jackdaw | Coloeus monedula | GCA_013407035.1_ASM1340703v1 | 1,035,863,955 | 41 | 73.78M (5) | 23.26M (15) | 30423 | 2020-07-13 | SAMN14646012 | PRJNA626609 | Univerisity of Munich | birds | |
| common whooper | Cygnus cygnus | GCA_014362685.1_C_cygnus_scaffold_01 | 1,052,375,201 | 25,888 | 71.94K (3,910) | 25.02K (11,023) | 219595 | 2020-08-22 | SAMD00237433 | PRJDB10192 | Environmental Genomics Office, Center for Environmental Biology and Ecosystem Studies, National Institute for Environmental Studies | birds | ||
| Japanese wood-pigeon | Columba janthina nitens | GCA_014362705.1_C_janthina_scaffold_01 | 1,083,634,036 | 15,508 | 187.83K (1,502) | 110.00K (2,530) | 985682 | 2020-08-22 | SAMD00237431 | PRJDB10189 | Environmental Genomics Office, Center for Enviromental Biology and Ecosystem Studies, National Institute for Environmental Studies | birds | ||
| Large-billed crow | Corvus macrorhynchos | GCA_014363025.1_C_macrorhynchos_scaffold_01 | 1,018,435,877 | 16,523 | 133.80K (2,023) | 52.27K (5,217) | 36249 | 2020-08-22 | SAMD00237434 | PRJDB10193 | Environmental Genomics Office, Center for Enviromental Biology and Ecosystem Studies, National Institute for Environmental Studies | birds | ||
| birds | Fratercula cirrhata | GCA_014363165.1_F_cirrhata_scaffold_01 | 1,105,963,355 | 33,379 | 54.95K (5,567) | 19.68K (15,155) | 43311 | 2020-08-22 | SAMD00237436 | PRJDB10194 | Environmental Genomics Office, Center for Enviromental Biology and Ecosystem Studies, National Institute for Environmental Studies | birds | ||
| Steller's sea-eagle | Haliaeetus pelagicus | GCA_014363185.1_H_pelagicus_scaffold_01 | 1,175,967,700 | 14,266 | 179.28K (1,838) | 86.63K (3,845) | VU | 52647 | 2020-08-22 | SAMD00237430 | PRJDB10191 | Environmental Genomics Office, Center for Environmental Biology and Ecosystem Studies, National Institute for Environmental Studies | birds | |
| birds | Phoebastria albatrus | GCA_014363385.1_P_albatrus_scaffold_01 | 1,165,200,156 | 23,454 | 87.99K (3,634) | 43.13K (7,696) | VU | 54023 | 2020-08-22 | SAMD00237437 | PRJDB10276 | Environmental Genomics Office, Center for Enviromental Biology and Ecosystem Studies, National Institute for Environmental Studies | birds | |
| common murre | Uria aalge inornata | GCA_014363425.1_U_aalge_scaffold_01 | 1,040,726,051 | 42,406 | 39.34K (6,605) | 19.43K (13,159) | 444853 | 2020-08-22 | SAMD00237438 | PRJDB10195 | Environmental Genomics Office, Center for Enviromental Biology and Ecosystem Studies, National Institute for Environmental Studies | birds | ||
| birds | Lycocorax pyrrhopterus obiensis (10) | GCA_014706015.1_ASM1470601v1 | 1,107,721,516 | 1,695 | 74.17M (6) | 7.45M (43) | 2767082 | 2020-09-23 | SAMN15881074 | PRJNA604967 | Uppsala University | birds | ||
| birds | Lycocorax pyrrhopterus obiensis (10) | GCA_014706025.1_ASM1470602v1 | 1,106,102,272 | 1,708 | 69.07M (7) | 6.29M (53) | 2767082 | 2020-09-23 | SAMN15881073 | PRJNA604967 | Uppsala University | birds | ||
| birds | Lycocorax pyrrhopterus obiensis (10) | GCA_014706035.1_ASM1470603v1 | 1,099,062,272 | 3,116 | 8.01M (40) | 6.29M (53) | 2767082 | 2020-09-23 | SAMN15881072 | PRJNA604967 | Uppsala University | birds | ||
| birds | Lycocorax pyrrhopterus obiensis (10) | GCA_014706055.1_ASM1470605v1 | 1,099,185,865 | 3,225 | 6.64M (50) | 6.29M (53) | 2767082 | 2020-09-23 | SAMN15881071 | PRJNA604967 | Uppsala University | birds | ||
| birds | Lycocorax pyrrhopterus obiensis (10) | GCA_014706265.1_ASM1470626v1 | 1,097,065,298 | 2,922 | 70.59M (6) | 6.10M (54) | 2767082 | 2020-09-23 | SAMN15881068 | PRJNA604967 | Uppsala University | birds | ||
| Eurasian tree sparrow | Passer montanus (2) | GCA_014805655.1_ASM1480565v1 | 1,039,949,367 | 18,974 | 11.16M (31) | 1.08M (281) | 9160 | 2020-09-30 | SAMN07998528 | PRJNA417520 | Institute of Zoology, Chinese Academy of Sciences | birds | ||
| view | Eurasian tree sparrow | Passer montanus (2) | GCF_014805655.1_ASM1480565v1 | 1,039,966,254 | 18,975 | 11.16M (31) | 1.08M (281) | 9160 | 2020-09-30 | SAMN07998528 | PRJNA417520 | Institute of Zoology, Chinese Academy of Sciences | birds | |
| Pearly parakeet | Pyrrhura lepida | GCA_015163975.1_ASM1516397v1 | 1,144,813,270 | 74,445 | 2.53M (8) | 70.17K (2,256) | VU | 311896 | 2020-11-01 | SAMN09681978 | PRJNA481549 | IRIDIAN GENOMES | birds | |
| gyrfalcon | Falco rusticolus (3) | GCA_015220075.1_bFalRus1.pri | 1,195,847,766 | 133 | 91.09M (6) | 15.32M (24) | 120794 | 2020-11-03 | SAMN12629496 | PRJNA561988 | Vertebrate Genomes Project | birds | ||
| gyrfalcon | Falco rusticolus (3) | GCA_015220155.1_bFalRus1.alt | 516,243,243 | 8,370 | 76.25K (2,120) | 120794 | 2020-11-02 | SAMN12629496 | PRJNA561989 | Vertebrate Genomes Project | birds | |||
| view | gyrfalcon | Falco rusticolus (3) | GCF_015220075.1_bFalRus1.pri | 1,195,847,496 | 133 | 91.09M (6) | 15.32M (24) | 120794 | 2020-11-03 | SAMN12629496 | PRJNA561988 | Vertebrate Genomes Project | birds | |
| Red-fronted tinkerbird | Pogoniulus pusillus (2) | GCA_015220175.1_bPogPus1.alt | 1,101,771,457 | 2,748 | 647.39K (486) | 647.39K (486) | 488313 | 2020-11-02 | SAMN15098508 | PRJNA637954 | Vertebrate Genomes Project | birds | ||
| view | Red-fronted tinkerbird | Pogoniulus pusillus (2) | GCA_015220805.1_bPogPus1.pri | 1,272,358,903 | 253 | 33.99M (13) | 16.79M (25) | 488313 | 2020-11-03 | SAMN15098508 | PRJNA637953 | Vertebrate Genomes Project | birds | |
| northern flicker | Colaptes auratus (2) | GCA_015227895.2_Caur_TTU_1.0 | 1,378,187,165 | 2,369 | 43.95M (11) | 826.96K (281) | 51355 | 2020-11-05 | SAMN14482758 | PRJNA616131 | Texas Tech University | birds | ||
| northern flicker | Colaptes auratus (2) | GCA_015227895.1_Caur_TTU_0.9 | 1,378,187,165 | 2,369 | 43.95M (11) | 826.96K (281) | 51355 | 2020-11-05 | Texas Tech University | birds | ||||
| chaffinch | Fringilla coelebs coelebs (2) | GCA_015532645.2_FrCoel.v2 | 994,865,760 | 3,255 | 69.73M (5) | 66.81K (3,893) | 1471794 | 2021-06-16 | SAMN16636146 | PRJNA674347 | Museo Nacional de Ciencias Naturales | birds | ||
| chaffinch | Fringilla coelebs coelebs (2) | GCA_015532645.1_FrCoel | 907,372,602 | 3,240 | 68.85M (5) | 67.08K (3,516) | 1471794 | 2020-11-17 | Museo Nacional de Ciencias Naturales | birds | ||||
| white wagtail | Motacilla alba alba (3) | GCA_015832195.1_Motacilla_alba_V1.0_pri | 1,072,653,902 | 618 | 72.39M (6) | 8.52M (32) | 1094192 | 2020-12-08 | SAMN16093224 | PRJNA662706 | Uppsala University | birds | ||
| white wagtail | Motacilla alba alba (3) | GCA_015832205.1_Motacilla_alba_V1.0_alt | 797,430,388 | 5,850 | 251.69K (900) | 1094192 | 2020-12-08 | SAMN16093224 | PRJNA662705 | Uppsala University | birds | |||
| view | white wagtail | Motacilla alba alba (3) | GCF_015832195.1_Motacilla_alba_V1.0_pri | 1,072,670,728 | 619 | 72.39M (6) | 8.52M (32) | 1094192 | 2020-12-08 | SAMN16093224 | PRJNA662706 | Uppsala University | birds | |
| birds | Lamprotornis superbus (2) | GCA_015883425.1_CU_Lasu_v1 | 1,067,625,052 | 2,869 | 4.39M (57) | 150.33K (1,828) | 245042 | 2020-12-09 | SAMN16294059 | PRJNA666448 | Columbia University | birds | ||
| Blue-throated parakeet | Pyrrhura cruentata | GCA_016545565.1_ASM1654556v1 | 1,125,645,419 | 70,001 | 11.49M (5) | 100.03K (1,763) | VU | 311901 | 2021-01-06 | SAMN09683515 | PRJNA481551 | IRIDIAN GENOMES | birds | |
| Willow warbler | Phylloscopus trochilus trochilus | GCA_016584745.1_LUNI_Phtr_3 | 1,168,570,690 | 39,596 | 12.45M (24) | 81.64K (3,720) | 209781 | 2021-01-08 | SAMN13496861 | PRJNA550489 | Lund University | birds | ||
| view | green peafowl | Pavo muticus | GCA_016647715.1_ASM1664771v1 | 1,061,110,005 | 2,446 | 2.03M (151) | 161.31K (1,877) | EN | 9050 | 2021-01-15 | SAMN15486085 | PRJNA644939 | Kunming Institute of Zoology, Chinese Academy of Sciences | birds |
| Red-fronted tinkerbird | Pogoniulus pusillus pusillus | GCA_016859755.1_ASM1685975v1 | 1,198,715,191 | 394,268 | 7.21K (37,608) | 2.30K (124,062) | 2517103 | 2021-02-10 | SAMN14819987 | PRJNA630018 | University of Cyprus | birds | ||
| tricolored blackbird | Agelaius tricolor (3) | GCA_017165875.1_TRBL-genome | 1,075,086,955 | 70,522 | 103.91K (2,648) | 87.74K (3,213) | EN | 9191 | 2021-03-04 | SAMN16392922 | PRJNA667954 | UCLA | birds | |
| Northern goshawk | Accipiter gentilis atricapillus | GCA_017309825.1_UBC_NOGO_v1 | 1,245,809,754 | 14,540 | 1.03M (337) | 183.40K (1,892) | 387753 | 2021-03-09 | SAMN17359091 | PRJNA692628 | University of British Columbia | birds | ||
| green heron | Butorides virescens | GCA_017310255.1_ASM1731025v1 | 1,194,621,758 | 29,147 | 222.99K (1,577) | 110671 | 2021-03-09 | SAMN16326460 | PRJNA666735 | Canada's Genomic Enterprise | birds | |||
| Snowy owl | Bubo scandiacus | GCA_017315185.1_ASM1731518v1 | 1,251,897,436 | 10,369 | 19.76M (18) | 196.83K (1,818) | VU | 371907 | 2021-03-09 | SAMN16326210 | PRJNA666618 | Canada's Genomic Enterprise | birds | |
| Whistler's warbler | Phylloscopus whistleri | GCA_017589585.1_ASM1758958v1 | 1,112,484,139 | 1,749 | 3.80M (78) | 274622 | 2021-03-26 | SAMN16704287 | PRJNA646997 | Institute of Zoology, Chinese Academy of Sciences | birds | |||
| white-rumped snowfinch | Onychostruthus taczanowskii (2) | GCA_017590055.1_ASM1759005v1 | 1,033,716,807 | 11,575 | 9.07M (33) | 867.34K (336) | 356909 | 2021-03-26 | SAMN18252883 | PRJNA417520 | Institute of Zoology, Chinese Academy of Sciences | birds | ||
| view | white-rumped snowfinch | Onychostruthus taczanowskii (2) | GCF_017590055.1_ASM1759005v1 | 1,033,733,724 | 11,576 | 9.07M (33) | 867.34K (336) | 356909 | 2021-03-26 | SAMN18252883 | PRJNA417520 | Institute of Zoology, Chinese Academy of Sciences | birds | |
| black-winged snowfinch | Montifringilla adamsi | GCA_017590115.1_ASM1759011v1 | 1,047,401,841 | 15,779 | 10.06M (30) | 466.43K (632) | 356906 | 2021-03-26 | SAMN18252885 | PRJNA417520 | Institute of Zoology, Chinese Academy of Sciences | birds | ||
| rufous-necked snowfinch | Pyrgilauda ruficollis (2) | GCA_017590135.1_ASM1759013v1 | 1,045,967,452 | 24,054 | 9.60M (34) | 660.26K (436) | 221976 | 2021-03-26 | SAMN18252884 | PRJNA417520 | Institute of Zoology, Chinese Academy of Sciences | birds | ||
| view | rufous-necked snowfinch | Pyrgilauda ruficollis (2) | GCF_017590135.1_ASM1759013v1 | 1,045,984,361 | 24,055 | 9.60M (34) | 660.26K (436) | 221976 | 2021-03-26 | SAMN18252884 | PRJNA417520 | Institute of Zoology, Chinese Academy of Sciences | birds | |
| Japanese white-eye | Zosterops japonicus | GCA_017612475.1_CCG_JAWE_1.0 | 1,104,389,468 | 29,442 | 9.69M (29) | 38.08K (7,569) | 36299 | 2021-03-29 | SAMN14609389 | PRJNA625760 | Smithsonian Institution | birds | ||
| Mariana crow | Corvus kubaryi (4) | GCA_017639225.1_C.kubaryi_AGA036_a1.0 | 1,068,123,824 | 1,443 | 17.10M (19) | 211.23K (1,453) | CR | 68294 | 2021-03-30 | SAMN16883221 | PRJNA680657 | United States Geological Survey | birds | |
| Mariana crow | Corvus kubaryi (4) | GCA_017639235.1_C.kubaryi_AGA036_p1.0 | 1,057,484,666 | 1,443 | 17.89M (18) | 211.13K (1,437) | CR | 68294 | 2021-03-30 | SAMN16883221 | PRJNA680658 | United States Geological Survey | birds | |
| Mariana crow | Corvus kubaryi (4) | GCA_018127105.1_ASM1812710v1 | 1,073,474,534 | 60,249 | 66.29K (4,586) | CR | 68294 | 2021-04-22 | SAMN08910264 | PRJNA448444 | Smithsonian Institution | birds | ||
| view | Mariana crow | Corvus kubaryi (4) | GCF_017639235.1_C.kubaryi_AGA036_p1.0 | 1,057,484,666 | 1,443 | 17.89M (18) | 211.13K (1,437) | CR | 68294 | 2021-03-30 | SAMN16883221 | PRJNA680658 | United States Geological Survey | birds |
| birds | Pluvialis apricaria (2) | GCA_017639475.1_bPluApr1.alt | 1,085,787,090 | 1,147 | 2.33M (134) | 2.33M (134) | 670352 | 2021-03-30 | SAMN18353970 | PRJNA715923 | Vertebrate Genomes Project | birds | ||
| view | birds | Pluvialis apricaria (2) | GCA_017639485.1_bPluApr1.pri | 1,247,767,512 | 107 | 87.53M (5) | 15.20M (23) | 670352 | 2021-03-30 | SAMN18353970 | PRJNA715924 | Vertebrate Genomes Project | birds | |
| lesser kestrel | Falco naumanni (4) | GCA_017639645.1_bFalNau1.mat | 1,156,765,323 | 551 | 65.16M (7) | 13.98M (24) | 148594 | 2021-03-30 | SAMN16870685 | PRJNA702665 | Vertebrate Genomes Project | birds | ||
| lesser kestrel | Falco naumanni (4) | GCA_017639655.1_bFalNau1.pat | 1,215,719,661 | 291 | 91.76M (6) | 13.75M (25) | 148594 | 2021-03-30 | SAMN16870685 | PRJNA702666 | Vertebrate Genomes Project | birds | ||
| view | lesser kestrel | Falco naumanni (4) | GCF_017639655.2_bFalNau1.pat | 1,215,719,661 | 291 | 91.76M (6) | 13.75M (25) | 148594 | 2021-03-30 | SAMN16870685 | PRJNA702666 | Vertebrate Genomes Project | birds | |
| Muscovy duck | Cairina moschata | GCA_018104995.1_ASM1810499v1 | 1,118,556,028 | 4,613 | 77.35M (5) | 315.52K (1,013) | 8855 | 2021-04-23 | SAMN16481400 | PRJNA669953 | HUAZHONG Agricultural University | birds | ||
| view | California condor | Gymnogyps californianus | GCA_018139145.1_ASM1813914v1 | 1,240,179,868 | 542 | 85.35M (5) | 17.08M (19) | CR | 33616 | 2021-04-25 | SAMN18477433 | PRJNA718609 | University of California San Francisco | birds |
| Japanese night-heron | Gorsachius goisagi | GCA_018403395.1_G_goisagi_scaffold_01 | 1,188,079,666 | 56,945 | 73.01K (4,272) | 42.98K (7,455) | VU | 1215352 | 2021-03-31 | SAMD00283120 | PRJDB11286 | Environmental Genomics Office Center for Environmetal Biology and Ecosystem Studies, National Institute for Environmental Studies | birds | |
| birds | Certhia americana | GCA_018697195.1_ASM1869719v1 | 1,113,356,413 | 8,309 | 64.36M (6) | 143.07K (2,090) | 186443 | 2021-06-03 | SAMN13974089 | PRJNA604561 | Texas Tech University | birds | ||
| streaked bowerbird | Amblyornis subalaris | GCA_018881555.1_ASM1888155v1 | 1,108,380,980 | 2,426 | 5.79M (51) | 695.83K (394) | 34926 | 2021-06-14 | SAMN14917922 | PRJNA601961 | Swedish Museum of Natural History | birds | ||
| eastern yellow wagtail | Motacilla tschutschensis | GCA_018904545.1_ASM1890454v1 | 1,053,394,660 | 9,349 | 5.48M (50) | 98.16K (2,913) | 662061 | 2021-06-16 | SAMN17241689 | PRJNA690099 | University of Colorado | birds | ||
| view | black-throated flowerpiercer | Diglossa brunneiventris | GCA_019023105.1_LSU_DiBr_2.0 | 1,079,473,785 | 600 | 67.28M (6) | 7.27M (44) | 547948 | 2021-06-24 | SAMN17308174 | PRJNA629984 | Louisiana State University | birds | |
| trumperter swan | Cygnus buccinator | GCA_019232035.1_ASM1923203v1 | 1,183,613,454 | 3,206 | 38.07M (8) | 156.61K (1,982) | 48397 | 2021-07-15 | SAMN17311309 | PRJNA691976 | United States Geological Survey | birds | ||
| Greater sage-grouse | Centrocercus urophasianus (2) | GCA_019232065.1_USGS_Curo_1.0 | 1,010,657,860 | 1,502 | 34.62M (9) | 177.39K (1,618) | 9002 | 2021-07-15 | SAMN20124253 | PRJNA734947 | United States Geological Survey | birds | ||
| view | Greater sage-grouse | Centrocercus urophasianus (2) | GCF_019232065.1_USGS_Curo_1.0 | 1,010,657,860 | 1,502 | 34.62M (9) | 177.39K (1,618) | 9002 | 2021-07-15 | SAMN20124253 | PRJNA734947 | United States Geological Survey | birds | |
| white-tailed ptarmigan | Lagopus leucura (2) | GCA_019238085.1_USGS_WTPT01 | 1,016,020,572 | 7,343 | 36.29M (8) | 214.15K (1,328) | 30410 | 2021-07-15 | SAMN12859112 | PRJNA574481 | United States Geological Survey | birds | ||
| view | white-tailed ptarmigan | Lagopus leucura (2) | GCF_019238085.1_USGS_WTPT01 | 1,016,020,572 | 7,343 | 36.29M (8) | 214.15K (1,328) | 30410 | 2021-07-15 | SAMN12859112 | PRJNA574481 | United States Geological Survey | birds | |
| view | red-legged partridge | Alectoris rufa | GCA_019345075.1_ASM1934507v1 | 1,027,480,606 | 10,598 | 11.58M (25) | 97.17K (2,907) | 9079 | 2021-07-26 | SAMN16083939 | PRJNA662415 | CIBIO/InBIO- University of Porto | birds | |
| view | brown eared-pheasant | Crossoptilon mantchuricum | GCA_019593555.1_cma1 | 1,013,441,081 | 2,408 | 3.63M (85) | 157.49K (1,775) | VU | 9097 | 2021-08-13 | SAMN15899056 | PRJNA659158 | Beijing Normal University | birds |
| red-backed shrike | Lanius collurio | GCA_020086605.1_ASM2008660v1 | 1,205,288,378 | 39,481 | 23.15M (16) | 143.57K (2,215) | 56324 | 2021-09-21 | SAMN15461556 | PRJNA644480 | BGI | birds | ||
| birds | Entomyzon cyanotis | GCA_020137895.1_ASM2013789v1 | 1,031,697,788 | 3,504 | 4.50M (68) | 202.86K (1,453) | 266349 | 2021-09-24 | SAMN07150251 | PRJNA387313 | Harvard University | birds | ||
| grasshopper sparrow | Ammodramus savannarum pratensis | GCA_020466415.1_ASM2046641v1 | 906,668,489 | 12,343 | 68.24M (5) | 68.85K (3,100) | 2860302 | 2021-10-13 | SAMN20250500 | PRJNA747010 | University of Florida | birds | ||
| common swift | Apus apus (2) | GCA_020740585.1_bApuApu2.alt.cur | 1,019,504,970 | 1,697 | 2.36M (119) | 2.36M (119) | 8895 | 2021-11-03 | SAMN22785356 | PRJNA776337 | Vertebrate Genomes Project | birds | ||
| view | common swift | Apus apus (2) | GCA_020740795.1_bApuApu2.pri.cur | 1,100,361,224 | 109 | 115.51M (4) | 25.56M (13) | 8895 | 2021-11-04 | SAMN22785356 | PRJNA776336 | Vertebrate Genomes Project | birds | |
| view | plumbeous ibis | Theristicus caerulescens (2) | GCA_020745775.1_bTheCae1.pri.cur | 1,203,372,763 | 88 | 101.37M (5) | 37.10M (10) | 1118847 | 2021-11-05 | SAMN22550094 | PRJNA774297 | Vertebrate Genomes Project | birds | |
| plumbeous ibis | Theristicus caerulescens (2) | GCA_020745805.1_bTheCae1.alt.cur | 1,041,135,290 | 749 | 4.66M (67) | 4.66M (67) | 1118847 | 2021-11-05 | SAMN22550094 | PRJNA774321 | Vertebrate Genomes Project | birds | ||
| Suruca trogon | Trogon surrucura (2) | GCA_020746095.1_bTroSur1.alt.cur | 997,329,498 | 1,535 | 1.47M (195) | 1.47M (195) | 297711 | 2021-11-05 | SAMN22550082 | PRJNA774296 | Vertebrate Genomes Project | birds | ||
| view | Suruca trogon | Trogon surrucura (2) | GCA_020746105.1_bTroSur1.pri.cur | 1,165,749,515 | 182 | 82.62M (5) | 16.24M (23) | 297711 | 2021-11-05 | SAMN22550082 | PRJNA774295 | Vertebrate Genomes Project | birds | |
| view | South Island takahe | Porphyrio hochstetteri (2) | GCA_020800305.1_bPorHoc1.mat.Z.cur | 1,270,294,353 | 174 | 71.57M (5) | 13.46M (31) | EN | 439704 | 2021-11-08 | SAMN22550412 | PRJNA774331 | Vertebrate Genomes Project | birds |
| view | South Island takahe | Porphyrio hochstetteri (2) | GCA_020801775.1_bPorHoc1.pat.decon | 1,245,128,614 | 178 | 58.90M (7) | 13.73M (28) | EN | 439704 | 2021-11-08 | SAMN22550412 | PRJNA774332 | Vertebrate Genomes Project | birds |
| birds | Riparia riparia | GCA_020917445.1_IEE_cmpg_Riparia_riparia_6505 | 1,093,155,110 | 19,999 | 13.69M (28) | 43.28K (6,566) | 88110 | 2021-11-22 | SAMN20845799 | PRJNA755835 | Institute of Ecology and Evolution, University of Bern | birds | ||
| tawny-flanked prinia | Prinia subflava | GCA_021018805.1_Cam_Psub_1.0 | 1,123,328,946 | 553 | 53.57M (6) | 7.98M (38) | 208062 | 2021-12-02 | SAMN20994451 | PRJNA758068 | University of Missouri | birds | ||
| Xingu scale-backed antbird | Willisornis vidua nigrigula | GCA_021164005.1_ASM2116400v1 | 1,109,653,187 | 21,748 | 11.61M (25) | 132.57K (2,219) | 1676003 | 2021-12-10 | SAMN15760291 | PRJNA655929 | University of Toronto | birds | ||
| Siberian stonechat | Saxicola maurus maurus | GCA_900205225.1_Saxicola_maurus.2 | 1,020,367,763 | 2,819 | 10.04M (24) | 96.28K (2,793) | 1187130 | 2017-09-28 | SAMEA94256668 | PRJEB19453 | UNIVERSITY OF OXFORD | birds | ||
| golden eagle | Aquila chrysaetos chrysaetos (8) | GCA_900496995.4_bAquChr1.4 | 1,233,723,095 | 145 | 46.93M (9) | 21.92M (19) | 223781 | 2021-03-26 | SAMEA994725 | PRJEB27699 | Wellcome Sanger Institute | birds | ||
| golden eagle | Aquila chrysaetos chrysaetos (8) | GCA_902153765.2_bAquChr1.4_alternate_haplotype | 792,810,001 | 3,855 | 630.65K (360) | 630.65K (360) | 223781 | 2021-03-26 | SAMEA994725 | PRJEB33298 | Wellcome Sanger Institute | birds | ||
| view | golden eagle | Aquila chrysaetos chrysaetos (8) | GCF_900496995.4_bAquChr1.4 | 1,233,704,830 | 144 | 46.93M (9) | 21.92M (19) | 223781 | 2021-03-26 | SAMEA994725 | PRJEB27699 | Wellcome Sanger Institute | birds | |
| golden eagle | Aquila chrysaetos chrysaetos (8) | GCA_900496995.1_bAquChr1.1 | 1,228,511,835 | 204 | 44.95M (10) | 24.26M (17) | 223781 | 2018-08-31 | SC | birds | ||||
| golden eagle | Aquila chrysaetos chrysaetos (8) | GCA_900496995.2_bAquChr1.2 | 1,203,454,851 | 142 | 46.93M (9) | 21.92M (19) | 223781 | 2019-07-08 | SC | birds | ||||
| view | golden eagle | Aquila chrysaetos chrysaetos (8) | GCA_902153765.1_bAquChr1.2_alternate_haplotype | 823,060,160 | 3,860 | 659.74K (341) | 640.22K (364) | 223781 | 2019-07-08 | SC | birds | |||
| view | golden eagle | Aquila chrysaetos chrysaetos (8) | GCF_900496995.1_bAquChr1.2 | 1,203,454,851 | 142 | 46.93M (9) | 21.92M (19) | 223781 | 2019-07-08 | SC | birds | |||
| view | birds | Streptopelia turtur (4) | GCA_901699155.2_bStrTur1.2 | 1,178,816,852 | 311 | 81.37M (4) | 3.79M (87) | VU | 177155 | 2021-05-17 | SAMEA994735 | PRJEB32724 | Wellcome Sanger Institute | birds |
| birds | Streptopelia turtur (4) | GCA_901699165.2_bStrTur1.2_alternate_haplotype | 1,035,330,184 | 3,334 | 776.32K (369) | VU | 177155 | 2021-04-15 | SAMEA994735 | PRJEB32725 | Wellcome Sanger Institute | birds | ||
| view | birds | Streptopelia turtur (4) | GCA_901699155.1_bStrTur1.1 | 1,178,928,410 | 357 | 80.15M (4) | 3.79M (87) | VU | 177155 | 2019-06-05 | SC | birds | ||
| view | birds | Streptopelia turtur (4) | GCA_901699165.1_bStrTur1.1_alternate_haplotype | 1,035,214,426 | 3,333 | 776.32K (369) | VU | 177155 | 2019-06-02 | SC | birds | |||
| birds | Camarhynchus parvulus (3) | GCA_901933205.1_STF_HiC | 1,051,609,828 | 1,345 | 70.36M (6) | 16.04M (19) | 87175 | 2019-09-06 | SAMEA5603054 | PRJEB32528 | UPPSALA UNIVERISTY | birds | ||
| view | birds | Camarhynchus parvulus (3) | GCA_902806625.1_Camarhynchus_parvulus_V1.1 | 1,064,016,364 | 1,756 | 71.06M (6) | 15.14M (23) | 87175 | 2020-03-21 | SAMEA6542012 | PRJEB36748 | UPPSALA UNIVERISTY | birds | |
| view | birds | Camarhynchus parvulus (3) | GCF_901933205.1_STF_HiC | 1,051,609,828 | 1,345 | 70.36M (6) | 16.04M (19) | 87175 | 2019-09-06 | SAMEA5603054 | PRJEB32528 | UPPSALA UNIVERISTY | birds | |
| Barn owl | Tyto alba alba (2) | GCA_902150015.1_genome_assembly_l500 | 1,219,191,878 | 21,509 | 4.62M (72) | 141.40K (2,478) | 507980 | 2020-02-10 | SAMEA5733888 | PRJEB33158 | . | birds | ||
| Eurasian skylark | Alauda arvensis | GCA_902810485.1_skylark_genome | 1,028,664,229 | 5,714 | 1.43M (202) | 79.70K (3,635) | 88112 | 2020-03-13 | SAMEA6585484 | PRJEB36048 | UNIVERSITY OF EDINBURGH | birds | ||
| Atlantic puffin | Fratercula arctica | GCA_905066775.2_FratArc_v2 | 1,279,358,051 | 27 | 105.66M (4) | 98.30K (3,328) | VU | 28701 | 2021-07-28 | SAMEA7482542 | PRJEB40926 | University of Oslo | birds | |
| view | Eurasian nightjar | Caprimulgus europaeus (2) | GCA_907165065.1_bCapEur3.1 | 1,177,791,212 | 121 | 82.61M (6) | 30.62M (11) | 111811 | 2021-05-17 | SAMEA7524394 | PRJEB44540 | WELLCOME SANGER INSTITUTE | birds | |
| Eurasian nightjar | Caprimulgus europaeus (2) | GCA_907165095.1_bCapEur3.1_alternate_haplotype | 1,051,868,380 | 2,502 | 763.18K (384) | 763.18K (384) | 111811 | 2021-05-15 | SAMEA7524394 | PRJEB44541 | WELLCOME SANGER INSTITUTE | birds | ||
| Eurasian reed warbler | Acrocephalus scirpaceus scirpaceus | GCA_910950805.1_RW_assembly | 1,075,083,815 | 200 | 74.44M (5) | 12.74M (21) | 126889 | 2021-08-16 | SAMEA8919111 | PRJEB45715 | University of Oslo | birds | ||
| zebrafish | Danio rerio (22) | GCA_000002035.4_GRCz11 | 1,679,186,873 | 1,922 | 4.74M (71) | 854.40K (358) | 7955 | 2017-05-09 | SAMN06930106 | PRJNA11776 | Genome Reference Consortium | fish | ||
| zebrafish | Danio rerio (22) | GCA_000767325.1_WGS31 | 1,411,763,065 | 32,031 | 613.72K (633) | 24.93K (16,539) | 7955 | 2010-05-24 | SAMEA3146315 | PRJNA11776 | Wellcome Trust Sanger Institute | fish | ||
| zebrafish | Danio rerio (22) | GCA_001487895.1_Zebrafish_Genome_Assembly_WGS32 | 1,442,815,812 | 64,482 | 3.09M (118) | 24.36K (14,170) | 7955 | 2015-12-23 | SAMEA3642453 | PRJEB11588 | SC | fish | ||
| zebrafish | Danio rerio (22) | GCA_008692375.1_ASM869237v1 | 1,306,177,993 | 149 | 50.58M (12) | 416.83K (766) | 7955 | 2019-10-07 | SAMN09717249 | PRJNA482893 | Harvard University | fish | ||
| view | zebrafish | Danio rerio (22) | GCA_018400075.1_ASM1840007v1 | 1,338,639,271 | 25 | 54.12M (11) | 1.20M (270) | 7955 | 2021-05-19 | SAMN09710566 | PRJNA482650 | North Carolina State University | fish | |
| view | zebrafish | Danio rerio (22) | GCF_000002035.6_GRCz11/danRer11 | 1,679,203,469 | 1,923 | 4.74M (71) | 854.40K (358) | 7955 | 2017-05-09 | SAMN06930106 | PRJNA11776 | Genome Reference Consortium | fish | |
| bony fishes | Mchenga conophoros | GCA_000150855.1_ASM15085v1 | 73,425,564 | 61,923 | 1.33K (18,513) | 1.07K (22,230) | CR | 35575 | 2008-07-09 | SAMN02743801 | PRJNA29477 | Cichlid Genome Consortium | fish | |
| blue mbuna | Labeotropheus fuelleborni | GCA_000150875.1_ASM15087v1 | 70,858,381 | 58,245 | 1.20K (19,671) | 1.07K (22,983) | 57307 | 2008-07-09 | SAMN02743802 | PRJNA29479 | Cichlid Genome Consortium | fish | ||
| golden mbuna | Melanochromis auratus | GCA_000150895.1_ASM15089v1 | 68,238,634 | 63,297 | 1.06K (21,847) | 977 (24,844) | 27751 | 2008-07-09 | SAMN02743803 | PRJNA29481 | Cichlid Genome Consortium | fish | ||
| bony fishes | Rhamphochromis esox | GCA_000150935.1_ASM15093v1 | 71,295,074 | 55,751 | 1.32K (19,443) | 1.13K (22,198) | VU | 163638 | 2008-07-09 | SAMN02743805 | PRJNA29485 | Cichlid Genome Consortium | fish | |
| Japanese medaka | Oryzias latipes (22) | GCA_000151825.1_ASM15182v1 | 662,701,370 | 82,496 | 25.75K (7,701) | 2.22K (76,122) | 8090 | 2007-04-26 | SAMD00036522 | PRJNA19569 | Medaka genome sequencing project | fish | ||
| Japanese medaka | Oryzias latipes (22) | GCA_000313675.1_ASM31367v1 | 869,801,494 | 7,188 | 6.08M (42) | 9.63K (21,695) | 8090 | 2007-05-09 | SAMD00036523 | PRJNA16702 | Medaka genome sequencing project | fish | ||
| Japanese medaka | Oryzias latipes (22) | GCA_002234675.1_ASM223467v1 | 734,040,372 | 24 | 31.22M (11) | 2.53M (88) | 8090 | 2017-07-27 | SAMN06689957 | PRJNA325079 | The University of Tokyo | fish | ||
| Japanese medaka | Oryzias latipes (22) | GCA_002234695.1_ASM223469v1 | 744,414,398 | 24 | 32.85M (11) | 3.52M (67) | 8090 | 2017-07-27 | SAMN06690114 | PRJNA325194 | The University of Tokyo | fish | ||
| Japanese medaka | Oryzias latipes (22) | GCA_002234715.1_ASM223471v1 | 677,633,405 | 24 | 28.87M (11) | 1.45M (134) | 8090 | 2017-07-27 | SAMN06689975 | PRJNA325193 | The University of Tokyo | fish | ||
| view | Japanese medaka | Oryzias latipes (22) | GCF_002234675.1_ASM223467v1 | 734,057,086 | 25 | 31.22M (11) | 2.53M (88) | 8090 | 2017-07-27 | SAMN06689957 | PRJNA325079 | The University of Tokyo | fish | |
| torafugu | Takifugu rubripes (8) | GCA_000180615.2_FUGU5 | 391,468,268 | 6,834 | 928.94K (113) | 52.88K (1,722) | 31033 | 2011-10-13 | SAMEA3138310 | PRJNA1434 | The Fugu Genome Sequencing Consortium | fish | ||
| torafugu | Takifugu rubripes (8) | GCA_901000725.3_fTakRub1.3 | 384,126,663 | 128 | 16.71M (10) | 3.14M (35) | 31033 | 2021-04-24 | SAMEA104384834 | PRJEB31988 | Wellcome Sanger Institute | fish | ||
| view | torafugu | Takifugu rubripes (8) | GCA_901000745.3_fTakRub1.2_alternate_haplotype | 350,016,965 | 2,012 | 276.38K (350) | 266.40K (360) | 31033 | 2019-06-05 | SAMEA104384834 | PRJEB31989 | SC | fish | |
| view | torafugu | Takifugu rubripes (8) | GCF_901000725.2_fTakRub1.2 | 384,126,662 | 128 | 16.71M (10) | 16.71M (10) | 31033 | 2019-06-05 | SAMEA104384834 | PRJEB31988 | SC | fish | |
| torafugu | Takifugu rubripes (8) | GCA_901000725.1_fTakRub1.1 | 384,110,215 | 127 | 16.71M (10) | 3.14M (35) | 31033 | 2019-04-11 | SC | fish | ||||
| three-spined stickleback | Gasterosteus aculeatus (5) | GCA_000180675.1_ASM18067v1 | 446,610,788 | 16,957 | 83.20K (1,459) | 69293 | 2006-02-01 | SAMN02981227 | PRJNA13579 | fish | ||||
| three-spined stickleback | Gasterosteus aculeatus (5) | GCA_006229165.1_NID | 467,452,432 | 10,242 | 3.72M (33) | 38.09K (3,273) | 69293 | 2019-06-11 | SAMN11077409 | PRJNA525775 | Institute of Ecology and Evolution | fish | ||
| three-spined stickleback | Gasterosteus aculeatus (5) | GCA_006229185.1_BOT | 427,295,814 | 18,433 | 312.21K (336) | 32.54K (3,527) | 69293 | 2019-06-11 | SAMN11077410 | PRJNA525775 | Institute of Ecology and Evolution | fish | ||
| three-spined stickleback | Gasterosteus aculeatus (5) | GCA_006232265.1_BAM | 445,644,378 | 25,430 | 491.02K (227) | 24.68K (4,480) | 69293 | 2019-06-11 | SAMN11077411 | PRJNA525775 | Institute of Ecology and Evolution | fish | ||
| three-spined stickleback | Gasterosteus aculeatus (5) | GCA_006232285.1_SYL | 431,811,987 | 15,853 | 401.65K (256) | 32.25K (3,562) | 69293 | 2019-06-11 | SAMN11077408 | PRJNA525775 | Institute of Ecology and Evolution | fish | ||
| spotted green pufferfish | Tetraodon nigroviridis | GCA_000180735.1_ASM18073v1 | 342,403,326 | 25,773 | 734.04K (102) | 29.05K (2,685) | 99883 | 2004-05-14 | SAMEA3138311 | PRJNA12350 | Genoscope | fish | ||
| Nile tilapia | Oreochromis niloticus (9) | GCA_000188235.2_Orenil1.1 | 927,679,487 | 5,677 | 2.77M (96) | 29.49K (6,912) | 8128 | 2012-02-08 | SAMN00117560 | PRJNA59571 | Broad Institute | fish | ||
| Nile tilapia | Oreochromis niloticus (9) | GCA_001858045.3_O_niloticus_UMD_NMBU | 1,005,664,923 | 2,459 | 38.84M (11) | 2.92M (96) | 8128 | 2018-06-29 | SAMN05859795 | PRJNA344471 | University of Maryland | fish | ||
| Nile tilapia | Oreochromis niloticus (9) | GCA_013350305.1_XX_nile | 993,468,885 | 403 | 40.35M (9) | 2.48M (96) | 8128 | 2020-06-18 | SAMN14256593 | PRJNA609616 | University of Vienna | fish | ||
| view | Nile tilapia | Oreochromis niloticus (9) | GCF_001858045.2_O_niloticus_UMD_NMBU | 1,005,681,550 | 2,460 | 38.84M (11) | 8128 | 2018-06-29 | SAMN05859795 | PRJNA344471 | University of Maryland | fish | ||
| Atlantic cod | Gadus morhua (7) | GCA_000231765.1_GadMor_May2010 | 824,311,139 | 427,427 | 393.17K (428) | 2.31K (64,401) | VU | 8049 | 2011-08-26 | SAMEA3138401 | PRJNA41391 | Genofisk | fish | |
| Atlantic cod | Gadus morhua (7) | GCA_010882105.1_gadMor_Celtic | 684,284,792 | 1,127 | 27.36M (11) | 10.56M (21) | VU | 8049 | 2020-02-21 | SAMN13876601 | PRJNA601905 | CIGENE | fish | |
| Atlantic cod | Gadus morhua (7) | GCA_900302565.1_ASM90030256v1 | 495,065,230 | 52,137 | 16.82K (7,788) | 5.76K (24,599) | VU | 8049 | 2018-03-20 | SAMEA4028801 | PRJEB12469 | CEES | fish | |
| view | Atlantic cod | Gadus morhua (7) | GCA_902167395.1_gadMor3.0_alternate_haplotype | 584,119,146 | 3,592 | 278.68K (621) | 278.23K (622) | VU | 8049 | 2019-07-16 | SAMEA5574046 | PRJEB33454 | SC | fish |
| Atlantic cod | Gadus morhua (7) | GCA_902167405.1_gadMor3.0 | 669,949,713 | 226 | 28.73M (11) | 1.02M (169) | VU | 8049 | 2019-07-16 | SAMEA5574046 | PRJEB33455 | SC | fish | |
| view | Atlantic cod | Gadus morhua (7) | GCF_902167405.1_gadMor3.0 | 669,966,409 | 227 | 28.73M (11) | 1.02M (169) | VU | 8049 | 2019-07-16 | SAMEA5574046 | PRJEB33455 | SC | fish |
| Atlantic salmon | Salmo salar (19) | GCA_000233375.4_ICSASG_v2 | 3,412,113,583 | 829,971 | 592.76K (594) | 36.09K (14,749) | 8030 | 2015-06-10 | SAMN02749551 | PRJNA72713 | International Cooperation to Sequence the Atlantic Salmon Genome | fish | ||
| view | Atlantic salmon | Salmo salar (19) | GCA_905237065.2_Ssal_v3.1 | 2,756,584,103 | 4,011 | 28.06M (33) | 28.06M (33) | 8030 | 2021-04-21 | SAMEA8062739 | PRJEB43080 | NORWEGIAN UNIVERSITY OF LIFE SCIENCES | fish | |
| Atlantic salmon | Salmo salar (19) | GCA_905477595.1_MSS_MAG_01 | 685,672 | 236 | 3.62K (54) | 8030 | 2021-04-15 | SAMEA7494063 | PRJEB40990 | CENTER FOR EVOLUTIONARY HOLOGENOMICS | fish | |||
| view | Atlantic salmon (refseq 2021) | Salmo salar (19) | GCF_905237065.1_Ssal_v3.1 | 2,756,584,103 | 4,011 | 28.06M (33) | 28.06M (33) | 8030 | 2021-04-21 | SAMEA8062739 | PRJEB43080 | NORWEGIAN UNIVERSITY OF LIFE SCIENCES | fish | |
| zebra mbuna | Maylandia zebra (8) | GCA_000238955.5_M_zebra_UMD2a | 957,485,269 | 1,690 | 32.66M (13) | 1.41M (189) | 106582 | 2018-04-10 | SAMN03892560 | PRJNA60369 | Broad Institute | fish | ||
| view | zebra mbuna | Maylandia zebra (8) | GCF_000238955.4_M_zebra_UMD2a | 957,485,262 | 1,690 | 32.66M (13) | 1.41M (189) | 106582 | 2018-04-10 | SAMN03892560 | PRJNA60369 | Broad Institute | fish | |
| zebra mbuna | Maylandia zebra (8) | GCA_000238955.2_MetZeb1.1 | 849,595,388 | 3,725 | 3.70M (62) | 106582 | 2012-7-11 | Broad Institute | fish | |||||
| zebra mbuna | Maylandia zebra (8) | GCA_000238955.3_M_zebra_UMD1 | 859,842,118 | 3,555 | 3.16M (81) | 106582 | 2015-9-22 | University of Maryland | fish | |||||
| bony fishes | Pundamilia nyererei (2) | GCA_000239375.1_PunNye1.0 | 830,133,247 | 7,236 | 2.53M (93) | 22.62K (8,701) | 303518 | 2011-12-22 | SAMN00149614 | PRJNA60367 | Broad Institute | fish | ||
| view | bony fishes | Pundamilia nyererei (2) | GCF_000239375.1_PunNye1.0 | 830,133,247 | 7,236 | 2.53M (93) | 22.62K (8,701) | 303518 | 2011-12-22 | SAMN00149614 | PRJNA60367 | Broad Institute | fish | |
| lyretail cichlid | Neolamprologus brichardi (4) | GCA_000239395.1_NeoBri1.0 | 847,893,845 | 9,098 | 4.43M (50) | 13.05K (13,506) | 32507 | 2011-12-22 | SAMN00139653 | PRJNA60365 | Broad Institute | fish | ||
| lyretail cichlid | Neolamprologus brichardi (4) | GCA_015106995.1_JUI1.scf | 677,492,425 | 75,226 | 15.78K (11,224) | 6.74K (29,556) | 32507 | 2020-10-29 | SAMN12123865 | PRJNA550295 | "CICHLID~X" | fish | ||
| lyretail cichlid | Neolamprologus brichardi (4) | GCA_015107025.1_JUH9.scf | 698,772,456 | 64,719 | 20.61K (8,552) | 8.26K (24,037) | 32507 | 2020-10-29 | SAMN12123864 | PRJNA550295 | "CICHLID~X" | fish | ||
| view | lyretail cichlid | Neolamprologus brichardi (4) | GCF_000239395.1_NeoBri1.0 | 847,910,432 | 9,099 | 4.43M (50) | 13.05K (13,506) | 32507 | 2011-12-22 | SAMN00139653 | PRJNA60365 | Broad Institute | fish | |
| Burton's mouthbrooder | Haplochromis burtoni (6) | GCA_000239415.1_AstBur1.0 | 831,411,547 | 8,001 | 1.19M (181) | 21.89K (8,930) | 8153 | 2011-12-22 | SAMN00139641 | PRJNA60363 | Broad Institute | fish | ||
| Burton's mouthbrooder | Haplochromis burtoni (6) | GCA_015108015.1_IZA1.scf | 675,588,291 | 66,009 | 17.73K (10,674) | 6.58K (30,885) | 8153 | 2020-10-29 | SAMN12123795 | PRJNA550295 | "CICHLID~X" | fish | ||
| Burton's mouthbrooder | Haplochromis burtoni (6) | GCA_015110255.1_JYD5.scf | 625,339,680 | 88,635 | 10.56K (17,271) | 4.60K (42,840) | 8153 | 2020-10-29 | SAMN12123947 | PRJNA550295 | "CICHLID~X" | fish | ||
| Burton's mouthbrooder | Haplochromis burtoni (6) | GCA_018398535.1_NCSU_Asbu1 | 854,572,272 | 7,420 | 1.41M (165) | 47.72K (4,400) | 8153 | 2021-05-19 | SAMN17845830 | PRJNA701062 | Reade Roberts Lab, North Carolina State University | fish | ||
| view | Burton's mouthbrooder | Haplochromis burtoni (6) | GCF_018398535.1_NCSU_Asbu1 | 854,588,855 | 7,421 | 1.41M (165) | 47.72K (4,400) | 8153 | 2021-05-19 | SAMN17845830 | PRJNA701062 | Reade Roberts Lab, North Carolina State University | fish | |
| southern platyfish | Xiphophorus maculatus (5) | GCA_000241075.1_Xiphophorus_maculatus-4.4.2 | 729,662,853 | 20,640 | 1.30M (150) | 22.27K (8,467) | 8083 | 2012-01-06 | SAMN02981361 | PRJNA72525 | The Genome Institute, Washington University at St. Louis | fish | ||
| southern platyfish | Xiphophorus maculatus (5) | GCA_002775205.2_X_maculatus-5.0-male | 704,304,519 | 101 | 31.54M (11) | 9.18M (25) | 8083 | 2017-12-07 | SAMN08025980 | PRJNA72525 | The Genome Institute, Washington University at St. Louis | fish | ||
| view | southern platyfish | Xiphophorus maculatus (5) | GCF_002775205.1_X_maculatus-5.0-male | 704,321,165 | 102 | 31.54M (11) | 9.18M (25) | 8083 | 2017-12-07 | SAMN08025980 | PRJNA72525 | The Genome Institute, Washington University at St. Louis | fish | |
| southern platyfish | Xiphophorus maculatus (5) | GCA_002775205.1_X_maculatus-5.0-male | 704,304,519 | 101 | 31.54M (11) | 8083 | 2017-11-16 | The Genome Institute, Washington University at St. Louis | fish | |||||
| Mexican tetra | Astyanax mexicanus (9) | GCA_000372685.2_Astyanax_mexicanus-2.0 | 1,335,239,194 | 2,415 | 35.38M (16) | 1.77M (198) | 7994 | 2017-09-25 | SAMN02981523 | PRJNA89115 | Washington University School of Medince | fish | ||
| Mexican tetra | Astyanax mexicanus (9) | GCA_004802775.1_Astyanax_mexicanus-1.0.2 | 1,191,242,572 | 10,735 | 1.78M (185) | 14.74K (16,919) | 7994 | 2019-04-22 | SAMN11404277 | PRJNA533584 | Aquatic Genome Models | fish | ||
| view | Mexican tetra | Astyanax mexicanus (9) | GCA_019721115.1_AMEX_1.1 | 1,378,811,567 | 195 | 52.03M (11) | 14.83M (27) | 7994 | 2021-08-25 | SAMN18310656 | PRJNA734455 | GenoFish | fish | |
| view | Mexican tetra | Astyanax mexicanus (9) | GCF_000372685.2_Astyanax_mexicanus-2.0 | 1,335,239,194 | 2,415 | 35.38M (16) | 1.77M (198) | 7994 | 2017-09-25 | SAMN02981523 | PRJNA89115 | Washington University School of Medince | fish | |
| sansaifugu | Takifugu flavidus (3) | GCA_000400755.1_version_1_of_Takifugu_flavidus_genome | 378,032,400 | 34,332 | 315.24K (297) | 8.23K (8,829) | 433684 | 2013-05-30 | SAMN01737183 | PRJNA168966 | IOCAS | fish | ||
| sansaifugu | Takifugu flavidus (3) | GCA_003711565.2_ASM371156v2 | 366,286,831 | 867 | 15.68M (10) | 4.36M (28) | 433684 | 2019-08-16 | SAMN10077091 | PRJNA491395 | Frasergen bioinfomatics | fish | ||
| sansaifugu | Takifugu flavidus (3) | GCA_003711565.1_ASM371156v1 | 366,287,830 | 867 | 15.68M (10) | 4.18M (29) | 433684 | 2018-11-06 | Frasergen bioinfomatics | fish | ||||
| Pacific bluefin tuna | Thunnus orientalis (3) | GCA_000418415.1_Thunnus_orientalis_ver_Ba_1.0 | 684,497,465 | 133,062 | 8.23K (23,876) | 8238 | 2013-06-27 | SAMD00036584 | PRJDA68701 | National Research Institute of Fisheries Science | fish | |||
| Pacific bluefin tuna | Thunnus orientalis (3) | GCA_009176245.1_tuna2 | 786,596,543 | 444 | 7.92M (35) | 5.46M (46) | 8238 | 2019-10-13 | SAMD00166193 | PRJDB8174 | National Research Institute of Fisheries Science, Japan Fisheries Research and Education Agency | fish | ||
| flag rockfish | Sebastes rubrivinctus (3) | GCA_000475215.1_SRub1.0 | 756,296,653 | 68,206 | 30.05K (7,100) | 13.54K (15,750) | 72099 | 2013-10-22 | SAMN02981552 | PRJNA62009 | University of Southern California | fish | ||
| flag rockfish | Sebastes rubrivinctus (3) | GCA_916701395.1_S-rubrivinctus_UW155382 | 774,979,963 | 51,472 | 41.74K (5,205) | 30.39K (7,253) | 72099 | 2021-10-07 | SAMEA7962397 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| flag rockfish | Sebastes rubrivinctus (3) | GCA_916701605.1_S-rubrivinctus_UW156309 | 787,309,355 | 31,438 | 113.40K (2,017) | 85.28K (2,636) | 72099 | 2021-11-13 | SAMEA7962398 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| tiger rockfish | Sebastes nigrocinctus (4) | GCA_000475235.3_ASM47523v3 | 746,044,620 | 15,872 | 116.27K (1,779) | 13.47K (13,685) | 72089 | 2016-12-20 | SAMN02981553 | PRJNA171384 | USC | fish | ||
| tiger rockfish | Sebastes nigrocinctus (4) | GCA_916701185.1_S-nigrocinctus_UW114045 | 804,714,463 | 59,328 | 105.35K (2,147) | 68.98K (3,286) | 72089 | 2021-10-09 | SAMEA7962374 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| tiger rockfish | Sebastes nigrocinctus (4) | GCA_000475235.1_Snig1.0 | 687,549,873 | 138,020 | 12.08K (15,334) | 72089 | 2013-10-22 | USC | fish | |||||
| tiger rockfish | Sebastes nigrocinctus (4) | GCA_000475235.2_ASM47523v2 | 658,975,568 | 97,082 | 12.02K (15,465) | 72089 | 2016-12-20 | USC | fish | |||||
| Amazon molly | Poecilia formosa (6) | GCA_000485575.1_Poecilia_formosa-5.1.2 | 748,923,461 | 3,985 | 1.57M (130) | 57.47K (3,546) | 48698 | 2013-10-28 | SAMN02981564 | PRJNA89109 | Aquatic Genome Models | fish | ||
| Amazon molly | Poecilia formosa (6) | GCA_013036085.2_Poecilia_formosa_haplotype_mexicana | 745,326,098 | 1,796 | 30.63M (12) | 1.89M (113) | 48698 | 2021-03-02 | SAMN14441686 | PRJNA616372 | University of Missouri | fish | ||
| Amazon molly | Poecilia formosa (6) | GCA_013036135.2_Poecilia_formosa_haplotype_latipinna | 674,607,737 | 976 | 25.60M (12) | 1.10M (180) | 48698 | 2021-03-02 | SAMN14441686 | PRJNA616373 | University of Missouri | fish | ||
| view | Amazon molly | Poecilia formosa (6) | GCF_000485575.1_Poecilia_formosa-5.1.2 | 748,923,461 | 3,985 | 1.57M (130) | 57.47K (3,546) | 48698 | 2013-10-28 | SAMN02981564 | PRJNA89109 | Aquatic Genome Models | fish | |
| Amazon molly | Poecilia formosa (6) | GCA_013036085.1_Poecilia_formosa_haplotype_mexicana | 745,198,679 | 1,796 | 30.63M (12) | 1.89M (113) | 48698 | 2020-05-12 | University of Missouri | fish | ||||
| sablefish | Anoplopoma fimbria (2) | GCA_000499045.2_NWFSC_Afim_r7.pbjelly | 784,187,114 | 26,624 | 288.53K (659) | 29.75K (6,303) | 229290 | 2020-10-05 | SAMN02144194 | PRJNA656728 | NOAA, National Marine Fisheries Service, Northwest Fisheries Science Center | fish | ||
| sablefish | Anoplopoma fimbria (2) | GCA_000499045.1_AnoFim1.0 | 699,326,415 | 208,506 | 5.16K (39,740) | 229290 | 2013-11-25 | University of Victoria | fish | |||||
| tongue sole | Cynoglossus semilaevis (2) | GCA_000523025.1_Cse_v1.0 | 470,182,763 | 29,642 | 509.86K (289) | 27.01K (4,681) | 244447 | 2014-01-28 | SAMN02595200 | PRJNA73987 | Beijing Genomics Institute | fish | ||
| view | tongue sole | Cynoglossus semilaevis (2) | GCF_000523025.1_Cse_v1.0 | 470,199,494 | 29,643 | 509.86K (289) | 27.01K (4,682) | 244447 | 2014-01-28 | SAMN02595200 | PRJNA73987 | Beijing Genomics Institute | fish | |
| European seabass | Dicentrarchus labrax (2) | GCA_000689215.1_seabass_V1.0 | 675,917,103 | 25 | 26.44M (10) | 54.13K (3,423) | 13489 | 2014-04-09 | SAMEA3271076 | PRJEB5099 | MPI-PZ | fish | ||
| European seabass | Dicentrarchus labrax (2) | GCA_905237075.1_dlabrax2021 | 695,892,153 | 302 | 29.89M (11) | 12.68M (19) | 13489 | 2021-04-24 | SAMEA8063812 | PRJEB43042 | Hellenic Centre for Marine Research, Institute for Marine Biology, Biotechnology and Aquaculture, Heraklion, Crete, Greece | fish | ||
| bicolor damselfish | Stegastes partitus (2) | GCA_000690725.1_Stegastes_partitus-1.0.2 | 800,491,834 | 5,818 | 411.66K (565) | 43.01K (4,606) | 144197 | 2014-05-13 | SAMN02743342 | PRJNA89147 | Aquatic Genome Models | fish | ||
| view | bicolor damselfish | Stegastes partitus (2) | GCF_000690725.1_Stegastes_partitus-1.0.2 | 800,491,834 | 5,818 | 411.66K (565) | 43.01K (4,606) | 144197 | 2014-05-13 | SAMN02743342 | PRJNA89147 | Aquatic Genome Models | fish | |
| silver pomfret | Pampus argenteus | GCA_000697985.1_PamArg1.0 | 350,448,509 | 298,139 | 1.59K (62,324) | 1.00K (95,978) | 206143 | 2014-06-03 | SAMN02699082 | PRJNA240272 | Kuwait Institute for Scientific Research (KISR) | fish | ||
| fathead minnow | Pimephales promelas (4) | GCA_000700825.1_FHM_SOAPdenovo | 1,219,326,373 | 73,057 | 60.38K (5,505) | 7.47K (28,846) | 90988 | 2014-06-10 | SAMN02418978 | PRJNA227290 | DuPont | fish | ||
| fathead minnow | Pimephales promelas (4) | GCA_000700965.1_FHM_SGA | 957,809,772 | 810,921 | 15.41K (11,491) | 1.67K (106,859) | 90988 | 2014-06-11 | SAMN02418978 | PRJNA227290 | DuPont | fish | ||
| fathead minnow | Pimephales promelas (4) | GCA_016745375.1_EPA_FHM_2.0 | 1,066,412,313 | 910 | 11.95M (23) | 295.77K (903) | 90988 | 2021-01-24 | SAMN12875914 | PRJNA565199 | US EPA | fish | ||
| view | fathead minnow | Pimephales promelas (4) | GCF_016745375.1_EPA_FHM_2.0 | 1,066,429,022 | 911 | 11.95M (23) | 295.77K (903) | 90988 | 2021-01-24 | SAMN12875914 | PRJNA565199 | US EPA | fish | |
| northern pike | Esox lucius (12) | GCA_000721915.3_Eluc_V3 | 904,480,558 | 1,018 | 7.95M (29) | 125.64K (1,991) | 8010 | 2017-01-18 | SAMN02439989 | PRJNA221548 | Ben F Koop, Jong S Leong | fish | ||
| northern pike | Esox lucius (12) | GCA_004634155.1_Eluc_v4 | 940,906,978 | 811 | 37.55M (11) | 3.40M (71) | 8010 | 2019-04-17 | SAMN09690694 | PRJNA221548 | University of Victoria | fish | ||
| northern pike | Esox lucius (12) | GCA_007844535.1_INRA_Eluc_1.0 | 964,671,668 | 5,096 | 794.01K (302) | 8010 | 2019-08-05 | SAMN10736172 | PRJNA514887 | INRA | fish | |||
| view | northern pike | Esox lucius (12) | GCA_011004835.1_fEsoLuc1.alt | 622,571,242 | 3,813 | 244.21K (694) | 243.53K (700) | 8010 | 2020-02-24 | SAMN12623624 | PRJNA561978 | Vertebrate Genomes Project | fish | |
| view | northern pike | Esox lucius (12) | GCA_011004845.1_fEsoLuc1.pri | 918,749,000 | 53 | 37.47M (11) | 22.63M (14) | 8010 | 2020-03-05 | SAMN12623624 | PRJNA561977 | Vertebrate Genomes Project | fish | |
| view | northern pike | Esox lucius (12) | GCF_011004845.1_fEsoLuc1.pri | 918,748,614 | 53 | 37.47M (11) | 22.63M (14) | 8010 | 2020-03-05 | SAMN12623624 | PRJNA561977 | Vertebrate Genomes Project | fish | |
| sheepshead minnow | Cyprinodon variegatus (2) | GCA_000732505.1_C_variegatus-1.0 | 1,035,167,975 | 9,258 | 835.30K (365) | 20.80K (11,158) | 28743 | 2015-10-01 | SAMN02736898 | PRJNA89149 | Aquatic Genome Models | fish | ||
| view | sheepshead minnow | Cyprinodon variegatus (2) | GCF_000732505.1_C_variegatus-1.0 | 1,035,184,475 | 9,259 | 835.30K (365) | 20.80K (11,158) | 28743 | 2015-10-01 | SAMN02736898 | PRJNA89149 | Aquatic Genome Models | fish | |
| black rockcod | Notothenia coriiceps (2) | GCA_000735185.1_NC01 | 636,595,335 | 38,656 | 217.66K (458) | 17.49K (9,130) | 8208 | 2014-07-29 | SAMN02206445 | PRJNA66471 | Antarctic Fish Genome Project | fish | ||
| view | black rockcod | Notothenia coriiceps (2) | GCF_000735185.1_NC01 | 636,613,682 | 38,657 | 217.66K (458) | 17.49K (9,130) | 8208 | 2014-07-29 | SAMN02206445 | PRJNA66471 | Antarctic Fish Genome Project | fish | |
| large yellow croaker | Larimichthys crocea (12) | GCA_000742935.1_ASM74293v1 | 648,390,617 | 10,265 | 495.74K (355) | 25.72K (6,933) | CR | 215358 | 2014-08-22 | SAMN02630636 | PRJNA237858 | Zhejiang Ocean University | fish | |
| large yellow croaker | Larimichthys crocea (12) | GCA_000972845.2_L_crocea_2.0 | 657,939,568 | 9,998 | 27.04M (9) | 277.49K (605) | CR | 215358 | 2018-11-27 | SAMN03092871 | PRJNA245366 | BGI | fish | |
| large yellow croaker | Larimichthys crocea (12) | GCA_003711585.2_ASM371158v2 | 744,270,469 | 2,698 | 29.20M (12) | 1.33M (140) | CR | 215358 | 2019-11-14 | SAMN10077518 | PRJNA491413 | Frasergen bioinfomatics | fish | |
| large yellow croaker | Larimichthys crocea (12) | GCA_003845795.1_LCFGL_HiC_1.0 | 721,257,125 | 1,053 | 27.85M (12) | 2.83M (69) | CR | 215358 | 2018-11-27 | SAMN10434301 | PRJNA505758 | Fujian Fuding Seagull Fishing Food Co. | fish | |
| large yellow croaker | Larimichthys crocea (12) | GCA_004352675.2_ASM435267v2 | 744,100,939 | 2,564 | 28.42M (12) | 1.39M (135) | CR | 215358 | 2020-06-24 | SAMN09701101 | PRJNA480121 | Jimei University | fish | |
| view | large yellow croaker | Larimichthys crocea (12) | GCF_000972845.2_L_crocea_2.0 | 657,939,657 | 9,998 | 27.04M (9) | 27.04M (9) | CR | 215358 | 2018-11-27 | SAMN03092871 | PRJNA245366 | BGI | fish |
| Midas cichlid | Amphilophus citrinellus (2) | GCA_000751415.1_Midas_v5 | 844,902,565 | 6,637 | 1.22M (188) | 23.46K (9,697) | 61819 | 2014-09-07 | SAMEA2698536 | PRJEB6974 | UNIVERSITY OF KONSTANZ | fish | ||
| Midas cichlid | Amphilophus citrinellus (2) | GCA_013435755.1_ASM1343575v1 | 961,230,971 | 1,392 | 37.15M (12) | 3.84M (67) | 61819 | 2020-07-23 | SAMN15430250 | PRJNA643830 | Max Planck Institute of Molecular Cell Biology and Genetics | fish | ||
| Amargosa pupfish | Cyprinodon nevadensis pectoralis | GCA_000776015.1_ASM77601v1 | 1,011,849,000 | 96,516 | 83.17K (3,383) | 1.42K (134,933) | VU | 69242 | 2014-11-13 | SAMN03072616 | PRJNA254053 | University of Colorado, Boulder | fish | |
| giant mudskipper | Periophthalmodon schlosseri | GCA_000787095.1_PS.fa | 679,761,122 | 46,662 | 39.31K (4,620) | 16.95K (11,471) | 1365757 | 2014-12-02 | SAMN03201695 | PRJNA232436 | BGI-Shenzhen | fish | ||
| bony fishes | Periophthalmus magnuspinnatus (4) | GCA_000787105.1_PM.fa | 701,696,780 | 26,060 | 296.16K (577) | 28.25K (6,580) | 409849 | 2014-12-02 | SAMN03201694 | PRJNA232435 | BGI-shenzhen | fish | ||
| view | bony fishes | Periophthalmus magnuspinnatus (4) | GCA_009829125.1_fPerMag1.pri | 752,621,857 | 124 | 32.87M (11) | 2.30M (87) | 409849 | 2020-01-03 | SAMN12629500 | PRJNA561998 | Vertebrate Genomes Project | fish | |
| view | bony fishes | Periophthalmus magnuspinnatus (4) | GCA_009829135.1_fPerMag1.alt | 698,977,026 | 2,799 | 469.97K (406) | 469.97K (406) | 409849 | 2020-01-03 | SAMN12629500 | PRJNA561999 | Vertebrate Genomes Project | fish | |
| view | bony fishes | Periophthalmus magnuspinnatus (4) | GCF_009829125.1_fPerMag1.pri | 752,621,858 | 124 | 32.87M (11) | 2.30M (87) | 409849 | 2020-01-03 | SAMN12629500 | PRJNA561998 | Vertebrate Genomes Project | fish | |
| walking goby | Scartelaos histophorus | GCA_000787155.1_SH.fa | 695,008,792 | 156,044 | 15.11K (11,571) | 8.81K (21,136) | 166764 | 2014-12-02 | SAMN03201693 | PRJNA232437 | BGI-shenzhen | fish | ||
| marbled flounder | Pseudopleuronectes yokohamae | GCA_000787555.1_Pyoko_1.0 | 547,831,023 | 525,502 | 1.99K (69,582) | 245875 | 2014-11-24 | SAMD00021058 | PRJDB3259 | Tohoku university | fish | |||
| great blue-spotted mudskipper | Boleophthalmus pectinirostris (2) | GCA_000788275.1_BP.fa | 955,735,039 | 16,619 | 2.38M (89) | 20.44K (12,344) | 150288 | 2014-12-02 | SAMN03201692 | PRJNA232434 | BGI-shenzhen | fish | ||
| view | great blue-spotted mudskipper | Boleophthalmus pectinirostris (2) | GCF_000788275.1_BP.fa | 955,752,150 | 16,620 | 2.38M (89) | 20.44K (12,345) | 150288 | 2014-12-02 | SAMN03201692 | PRJNA232434 | BGI-shenzhen | fish | |
| mummichog | Fundulus heteroclitus (5) | GCA_000826765.1_Fundulus_heteroclitus-3.0.2 | 1,021,882,034 | 10,179 | 1.25M (221) | 16.69K (14,865) | 8078 | 2015-01-21 | SAMN03277211 | PRJNA177717 | The Genome Institute at Washington University School of Medicine | fish | ||
| mummichog | Fundulus heteroclitus (5) | GCA_011125445.2_MU-UCD_Fhet_4.1 | 1,203,489,213 | 1,030 | 39.34M (14) | 587.97K (608) | 8078 | 2020-08-13 | SAMN13668183 | PRJNA597160 | University of Missouri | fish | ||
| view | mummichog | Fundulus heteroclitus (5) | GCF_011125445.2_MU-UCD_Fhet_4.1 | 1,203,505,739 | 1,031 | 39.34M (14) | 587.97K (608) | 8078 | 2020-08-13 | SAMN13668183 | PRJNA597160 | University of Missouri | fish | |
| mummichog | Fundulus heteroclitus (5) | GCA_011125445.1_MU-UCD_Fhet_4.0 | 1,206,615,001 | 1,038 | 39.35M (14) | 586.24K (610) | 8078 | 2020-03-17 | University of Missouri | fish | ||||
| turquoise killifish | Nothobranchius furzeri (5) | GCA_000878545.1_NotFur1 | 1,022,966,143 | 46,717 | 117.69K (2,489) | 8.60K (32,666) | 105023 | 2015-02-20 | SAMN02750843 | PRJNA221357 | Stanford University | fish | ||
| turquoise killifish | Nothobranchius furzeri (5) | GCA_001465895.2_Nfu_20140520 | 1,242,498,532 | 5,896 | 57.37M (9) | 19.95K (12,600) | 105023 | 2015-12-11 | SAMEA2698544 | PRJEB5837 | LEIBNIZ INSTITUTE FOR AGE RESEARCH - FRITZ LIPMANN | fish | ||
| turquoise killifish | Nothobranchius furzeri (5) | GCA_014300015.1_MPIA_NFZ_2.0 | 1,052,345,740 | 40,229 | 49.93M (9) | 26.00K (10,259) | 105023 | 2020-08-27 | SAMN13746779 | PRJNA599375 | Max Planck Institute for Biology of Ageing | fish | ||
| view | turquoise killifish | Nothobranchius furzeri (5) | GCF_001465895.1_Nfu_20140520 | 1,242,518,059 | 5,897 | 57.37M (9) | 19.95K (12,601) | 105023 | 2015-12-11 | SAMEA2698544 | PRJEB5837 | LEIBNIZ INSTITUTE FOR AGE RESEARCH - FRITZ LIPMANN | fish | |
| common carp | Cyprinus carpio (9) | GCA_000951615.2_common_carp_genome | 1,713,641,436 | 9,377 | 7.83M (48) | 75.08K (6,621) | VU | 7962 | 2014-11-03 | SAMEA2757102 | PRJEB7241 | CHINESE ACADEMY OF FISHERY SCIENCE | fish | |
| common carp | Cyprinus carpio (9) | GCA_001270105.1_ASM127010v1 | 1,380,095,472 | 80,028 | 66.84K (5,709) | 7.87K (51,238) | VU | 7962 | 2015-08-18 | SAMN03856486 | PRJNA73579 | ZF-screens B.V. | fish | |
| common carp | Cyprinus carpio (9) | GCA_004011555.1_German_Mirror_carp_1.0 | 1,414,711,435 | 18,488 | 2.60M (140) | 94.55K (4,046) | VU | 7962 | 2019-01-10 | SAMN10617437 | PRJNA510861 | Chinese Academy of Fishery Sciences | fish | |
| common carp | Cyprinus carpio (9) | GCA_004011575.1_Hunaghe_carp_2.0 | 1,423,633,724 | 143,821 | 1.60M (232) | 59.68K (6,523) | VU | 7962 | 2019-01-10 | SAMN10617435 | PRJNA510861 | Chinese Academy of Fishery Sciences | fish | |
| common carp | Cyprinus carpio (9) | GCA_004011595.1_Hebao_red_carp_1.0 | 1,457,977,772 | 260,608 | 898.64K (399) | 36.31K (10,683) | VU | 7962 | 2019-01-10 | SAMN10617436 | PRJNA510861 | Chinese Academy of Fishery Sciences | fish | |
| view | common carp | Cyprinus carpio (9) | GCF_018340385.1_ASM1834038v1 | 1,680,134,903 | 6,701 | 29.55M (24) | 1.56M (229) | VU | 7962 | 2021-05-12 | SAMN17005855 | PRJNA682709 | Chinese Academy of Fishery Sciences | fish |
| Atlantic herring | Clupea harengus (8) | GCA_000966335.1_ASM96633v1 | 807,695,261 | 6,914 | 1.86M (113) | 22.28K (8,565) | 7950 | 2015-03-30 | SAMN03154066 | PRJNA265919 | BGI | fish | ||
| Atlantic herring | Clupea harengus (8) | GCA_900323705.1_C.harengus | 789,621,745 | 2,438 | 1.97M (106) | 28.41K (6,599) | 7950 | 2018-04-12 | SAMEA104710403 | PRJEB25669 | Amplexa Genetics | fish | ||
| Atlantic herring | Clupea harengus (8) | GCA_900700415.2_Ch_v2.0.2 | 786,308,905 | 1,723 | 29.85M (13) | 1.01M (198) | 7950 | 2019-04-16 | SAMEA5339254 | PRJEB31270 | UPPSALA UNIVERISTY | fish | ||
| Atlantic herring | Clupea harengus (8) | GCA_902175115.3_ChASM_A3 | 790,426,535 | 2,419 | 1.97M (102) | 22.50K (8,401) | 7950 | 2019-08-15 | SAMEA5815659 | PRJEB25669 | Amplexa Genetics | fish | ||
| view | Atlantic herring | Clupea harengus (8) | GCF_900700415.2_Ch_v2.0.2 | 786,325,606 | 1,724 | 29.85M (13) | 1.01M (198) | 7950 | 2019-04-16 | SAMEA5339254 | PRJEB31270 | UPPSALA UNIVERISTY | fish | |
| view | Atlantic herring | Clupea harengus (8) | GCF_900700415.1_Ch_v2.0.2 | 725,686,888 | 27 | 30.02M (12) | 1.15M (170) | 7950 | 2019-04-16 | UPPSALA UNIVERISTY | fish | |||
| Asian bonytongue | Scleropages formosus (11) | GCA_001005745.2_aro_v2 | 708,403,365 | 42,110 | 58.85K (3,326) | 5.01K (40,259) | EN | 113540 | 2015-10-13 | SAMN02592717 | PRJNA232741 | Monash University Malaysia | fish | |
| Asian bonytongue | Scleropages formosus (11) | GCA_001624245.1_ASM162424v1 | 746,544,453 | 14,183 | 1.87M (115) | 63.53K (3,378) | EN | 113540 | 2016-04-20 | SAMN03894453 | PRJNA290061 | BGI-SZ | fish | |
| Asian bonytongue | Scleropages formosus (11) | GCA_001624255.1_ASM162425v1 | 738,407,480 | 10,955 | 1.63M (129) | 60.47K (3,551) | EN | 113540 | 2016-04-20 | SAMN03894452 | PRJNA290062 | BGI-SZ | fish | |
| Asian bonytongue | Scleropages formosus (11) | GCA_001624265.1_ASM162426v1 | 777,342,625 | 4,818 | 5.97M (40) | 30.80K (7,062) | EN | 113540 | 2016-04-20 | SAMN03894411 | PRJNA290065 | BGI-SZ | fish | |
| view | Asian bonytongue | Scleropages formosus (11) | GCA_900964985.2_fSclFor1.1_alternate_haplotype | 751,313,211 | 2,006 | 659.44K (307) | 659.44K (307) | EN | 113540 | 2019-04-11 | SAMEA4872123 | PRJEB31996 | SC | fish |
| view | Asian bonytongue | Scleropages formosus (11) | GCF_900964775.1_fSclFor1.1 | 784,563,014 | 72 | 31.08M (11) | 31.08M (11) | EN | 113540 | 2019-04-11 | SAMEA4872123 | PRJEB31995 | SC | fish |
| barramundi perch | Lates calcarifer (5) | GCA_001010145.1_ASM101014v1 | 589,095,062 | 22,775 | 310.51K (528) | 14.53K (11,729) | 8187 | 2015-05-18 | SAMN03466679 | PRJNA280691 | James Cook University | fish | ||
| barramundi perch | Lates calcarifer (5) | GCA_001640805.1_ASM164080v1 | 668,464,831 | 3,807 | 1.19M (119) | 1.07M (139) | 8187 | 2016-05-09 | SAMN04026617 | PRJNA294489 | Temasek Life Sciences Laboratory | fish | ||
| barramundi perch | Lates calcarifer (5) | GCA_900066035.1_ASB_HGAPassembly_v1 | 668,464,831 | 3,807 | 1.19M (119) | 1.07M (139) | 8187 | 2017-03-02 | SAMEA3519091 | PRJEB10637 | TEMASEK LIFE SCIENCES LABORATORY | fish | ||
| barramundi perch | Lates calcarifer (5) | GCA_900066045.1_ASB_FALCONassembly_v1 | 605,008,470 | 1,422 | 1.92M (78) | 8187 | 2017-03-02 | SAMEA3519091 | PRJEB10637 | TEMASEK LIFE SCIENCES LABORATORY | fish | |||
| view | barramundi perch | Lates calcarifer (5) | GCF_001640805.1_ASM164080v1 | 668,481,366 | 3,808 | 1.19M (119) | 1.07M (139) | 8187 | 2016-05-09 | SAMN04026617 | PRJNA294489 | Temasek Life Sciences Laboratory | fish | |
| bony fishes | Austrofundulus limnaeus (2) | GCA_001266775.1_Austrofundulus_limnaeus-1.0 | 866,963,281 | 29,785 | 1.10M (184) | 8.10K (24,011) | 52670 | 2015-07-28 | SAMN03490872 | PRJNA280995 | Center for Life in Extreme Environments at Portland State University, Portland, OR | fish | ||
| view | bony fishes | Austrofundulus limnaeus (2) | GCF_001266775.1_Austrofundulus_limnaeus-1.0 | 866,963,281 | 29,785 | 1.10M (184) | 8.10K (24,011) | 52670 | 2015-07-28 | SAMN03490872 | PRJNA280995 | Center for Life in Extreme Environments at Portland State University, Portland, OR | fish | |
| sailfin molly | Poecilia latipinna (2) | GCA_001443285.1_P_latipinna-1.0 | 815,144,743 | 17,988 | 279.20K (882) | 33.28K (5,928) | 48699 | 2015-11-13 | SAMN02048973 | PRJNA196862 | The Genome Institute at Washington University School of Medicine (WUGSC) | fish | ||
| view | sailfin molly | Poecilia latipinna (2) | GCF_001443285.1_P_latipinna-1.0 | 815,144,743 | 17,988 | 279.20K (882) | 33.28K (5,928) | 48699 | 2015-11-13 | SAMN02048973 | PRJNA196862 | The Genome Institute at Washington University School of Medicine (WUGSC) | fish | |
| shortfin molly | Poecilia mexicana (2) | GCA_001443325.1_P_mexicana-1.0 | 801,711,499 | 18,105 | 275.32K (877) | 39.84K (4,911) | 48701 | 2015-11-13 | SAMN02048972 | PRJNA196869 | The Genome Institute at Washington University School of Medicine (WUGSC) | fish | ||
| view | shortfin molly | Poecilia mexicana (2) | GCF_001443325.1_P_mexicana-1.0 | 801,711,499 | 18,105 | 275.32K (877) | 39.84K (4,911) | 48701 | 2015-11-13 | SAMN02048972 | PRJNA196869 | The Genome Institute at Washington University School of Medicine (WUGSC) | fish | |
| green swordtail | Xiphophorus hellerii (4) | GCA_001443345.1_Xiphophorus_hellerii-3.0.1 | 733,802,474 | 25 | 29.45M (11) | 11.30K (14,324) | 8084 | 2015-11-13 | SAMN03968850 | PRJNA290782 | McDonnell Genome Institute - Washington University School of Medicine | fish | ||
| green swordtail | Xiphophorus hellerii (4) | GCA_003331165.2_Xiphophorus_hellerii-4.1 | 732,889,490 | 86 | 32.40M (11) | 7.08M (28) | 8084 | 2019-12-05 | SAMN09545741 | PRJNA290782 | McDonnell Genome Institute - Washington University School of Medicine | fish | ||
| view | green swordtail | Xiphophorus hellerii (4) | GCF_003331165.1_Xiphophorus_hellerii-4.1 | 732,906,125 | 87 | 32.40M (11) | 7.08M (28) | 8084 | 2019-12-05 | SAMN09545741 | PRJNA290782 | McDonnell Genome Institute - Washington University School of Medicine | fish | |
| green swordtail | Xiphophorus hellerii (4) | GCA_003331165.1_Xiphophorus_hellerii-4.0 | 733,126,988 | 85 | 26.47M (12) | 7.12M (28) | 8084 | 2018-07-23 | McDonnell Genome Institute - Washington University School of Medicine | fish | ||||
| Monterrey platyfish | Xiphophorus couchianus (4) | GCA_001444195.3_X_couchianus-1.0 | 688,524,871 | 67 | 30.55M (11) | 15.32M (17) | 32473 | 2018-09-19 | SAMN03922721 | PRJNA290781 | McDonnell Genome Institute - Washington University School of Medicine | fish | ||
| view | Monterrey platyfish | Xiphophorus couchianus (4) | GCF_001444195.1_X_couchianus-1.0 | 688,541,509 | 68 | 30.55M (11) | 15.32M (17) | 32473 | 2018-09-19 | SAMN03922721 | PRJNA290781 | McDonnell Genome Institute - Washington University School of Medicine | fish | |
| Monterrey platyfish | Xiphophorus couchianus (4) | GCA_001444195.1_Xiphophorus_couchianus-4.0.1 | 708,396,389 | 25 | 29.40M (11) | 32473 | 2015-11-17 | McDonnell Genome Institute - Washington University School of Medicine | fish | |||||
| Monterrey platyfish | Xiphophorus couchianus (4) | GCA_001444195.2_ASM144419v2 | 688,524,871 | 67 | 30.55M (11) | 32473 | 2018-5-21 | McDonnell Genome Institute - Washington University School of Medicine | fish | |||||
| bony fishes | Cottus rhenanus | GCA_001455555.1_ASM145555v1 | 563,609,416 | 164,693 | 7.25K (21,085) | 2.13K (61,247) | 446433 | 2015-12-02 | SAMN04145896 | PRJNA297779 | Cold Spring Harbor Laboratory | fish | ||
| bony fishes | Sinocyclocheilus anshuiensis (2) | GCA_001515605.1_SAMN03320099.WGS_v1.1 | 1,632,701,648 | 85,681 | 1.28M (364) | 17.27K (25,856) | 1608454 | 2015-12-14 | SAMN03320099 | PRJNA274017 | BGI, Shenzhen | fish | ||
| view | bony fishes | Sinocyclocheilus anshuiensis (2) | GCF_001515605.1_SAMN03320099.WGS_v1.1 | 1,632,718,266 | 85,682 | 1.28M (364) | 17.27K (25,856) | 1608454 | 2015-12-14 | SAMN03320099 | PRJNA274017 | BGI, Shenzhen | fish | |
| bony fishes | Sinocyclocheilus rhinocerous (2) | GCA_001515625.1_SAMN03320098_v1.1 | 1,655,769,822 | 164,172 | 945.74K (486) | 18.76K (23,363) | 307959 | 2015-12-14 | SAMN03320098 | PRJNA274017 | BGI, Shenzhen | fish | ||
| view | bony fishes | Sinocyclocheilus rhinocerous (2) | GCF_001515625.1_SAMN03320098_v1.1 | 1,655,786,410 | 164,173 | 945.74K (486) | 18.76K (23,364) | 307959 | 2015-12-14 | SAMN03320098 | PRJNA274017 | BGI, Shenzhen | fish | |
| bony fishes | Sinocyclocheilus grahami (2) | GCA_001515645.1_SAMN03320097.WGS_v1.1 | 1,750,271,176 | 31,276 | 1.16M (416) | 29.35K (15,555) | CR | 75366 | 2015-12-16 | SAMN03320097 | PRJNA274017 | BGI, Shenzhen | fish | |
| view | bony fishes | Sinocyclocheilus grahami (2) | GCF_001515645.1_SAMN03320097.WGS_v1.1 | 1,750,287,761 | 31,277 | 1.16M (416) | 29.35K (15,556) | CR | 75366 | 2015-12-16 | SAMN03320097 | PRJNA274017 | BGI, Shenzhen | fish |
| Mi-iuy croaker | Miichthys miiuy | GCA_001593715.1_ASM159371v1 | 619,300,777 | 6,294 | 1.15M (95) | 81.27K (1,741) | 240162 | 2016-03-17 | SAMN02486174 | PRJNA272995 | Zhejiang Ocean University | fish | ||
| mangrove rivulus | Kryptolebias marmoratus (5) | GCA_001649575.2_ASM164957v2 | 680,638,340 | 299 | 28.17M (11) | 57.65K (2,935) | 37003 | 2020-11-16 | SAMN04622665 | PRJNA626665 | Washington State University | fish | ||
| mangrove rivulus | Kryptolebias marmoratus (5) | GCA_001663955.1_ASM166395v1 | 653,959,781 | 40,757 | 111.54K (1,319) | 16.02K (10,303) | 37003 | 2016-06-17 | SAMN03892719 | PRJNA290522 | Washington State University | fish | ||
| view | mangrove rivulus | Kryptolebias marmoratus (5) | GCF_001649575.2_ASM164957v2 | 680,655,669 | 300 | 28.17M (11) | 57.62K (2,936) | 37003 | 2020-11-16 | SAMN04622665 | PRJNA626665 | Washington State University | fish | |
| mangrove rivulus | Kryptolebias marmoratus (5) | GCA_001649575.1_ASM164957v1 | 680,349,455 | 3,072 | 2.23M (80) | 57.88K (2,931) | 37003 | 2016-05-22 | Sungkyunkwan University | fish | ||||
| view | mangrove rivulus | Kryptolebias marmoratus (5) | GCF_001649575.1_ASM164957v1 | 680,366,784 | 3,073 | 2.23M (80) | 57.88K (2,931) | 37003 | 2016-05-22 | Sungkyunkwan University | fish | |||
| channel catfish | Ictalurus punctatus (7) | GCA_001660625.2_IpCoco_1.2 | 821,751,792 | 9,341 | 7.90M (30) | 81.42K (2,657) | 7998 | 2019-01-25 | SAMN03486842 | PRJNA281269 | Auburn University | fish | ||
| channel catfish | Ictalurus punctatus (7) | GCA_004006655.3_ASM400665v3 | 1,036,985,268 | 3,164 | 26.32M (17) | 1.69M (70) | 7998 | 2019-01-25 | SAMN08235469 | PRJNA427343 | Auburn University | fish | ||
| view | channel catfish (USDA103 v2 2019) | Ictalurus punctatus (7) | GCF_001660625.2_IpCoco_1.2 | 821,768,289 | 9,342 | 28.15M (13) | n/a | n/a | n/a | fish | ||||
| channel catfish | Ictalurus punctatus (7) | GCA_001660625.1_IpCoco_1.2 | 783,258,224 | 9,340 | 7.73M (31) | 77.20K (2,838) | 7998 | 2016-06-21 | Auburn University | fish | ||||
| channel catfish | Ictalurus punctatus (7) | GCA_004006655.1_ASM400665v1 | 1,002,389,428 | 3,163 | 26.68M (16) | 7998 | 2019-1-9 | Auburn University | fish | |||||
| view | channel catfish | Ictalurus punctatus (7) | GCF_001660625.1_IpCoco_1.2 | 783,274,721 | 9,341 | 7.73M (31) | 77.20K (2,838) | 7998 | 2016-06-21 | SAMN03486842 | PRJNA281269 | Auburn University | fish | |
| striped sea-bass | Morone saxatilis (3) | GCA_001663605.1_SBDraft1 | 585,166,552 | 35,012 | 29.98K (5,488) | 17.87K (9,290) | 34816 | 2016-06-16 | SAMN03174709 | PRJNA266827 | Striped Bass Genomics | fish | ||
| striped sea-bass | Morone saxatilis (3) | GCA_004916995.1_NCSU_SB_2.0 | 598,109,547 | 629 | 25.94M (11) | 17.21K (9,772) | 34816 | 2019-04-26 | SAMN11399929 | PRJNA532441 | North Carolina State University | fish | ||
| view | striped sea-bass | Morone saxatilis (3) | GCF_004916995.1_NCSU_SB_2.0 | 598,127,127 | 630 | 25.94M (11) | 17.21K (9,773) | 34816 | 2019-04-26 | SAMN11399929 | PRJNA532441 | North Carolina State University | fish | |
| red-bellied piranha | Pygocentrus nattereri (5) | GCA_001682695.1_Pygocentrus_nattereri-1.0.2 | 1,285,335,786 | 283,517 | 1.44M (199) | 57.73K (5,642) | 42514 | 2016-07-12 | SAMN04522165 | PRJNA301891 | McDonnell Genome Institute | fish | ||
| red-bellied piranha | Pygocentrus nattereri (5) | GCA_015220065.1_fPygNat1.alt | 289,313,524 | 1,751 | 289.65K (285) | 42514 | 2020-11-02 | SAMN12623623 | PRJNA561976 | Vertebrate Genomes Project | fish | |||
| red-bellied piranha | Pygocentrus nattereri (5) | GCA_015220715.1_fPygNat1.pri | 1,222,067,157 | 56 | 42.28M (13) | 12.90M (29) | 42514 | 2020-11-03 | SAMN12623623 | PRJNA561975 | Vertebrate Genomes Project | fish | ||
| view | red-bellied piranha | Pygocentrus nattereri (5) | GCF_015220715.1_fPygNat1.pri | 1,222,050,449 | 55 | 42.28M (13) | 12.90M (29) | 42514 | 2020-11-03 | SAMN12623623 | PRJNA561975 | Vertebrate Genomes Project | fish | |
| ocean sunfish | Mola mola | GCA_001698575.1_ASM169857v1 | 639,451,992 | 5,552 | 8.77M (19) | 23.24K (8,277) | VU | 94237 | 2016-08-08 | SAMN04335856 | PRJNA305960 | BGI-shenzhen | fish | |
| view | tiger tail seahorse (QL1 v2 2016) | Hippocampus comes (4) | GCF_001891065.2_H_comes_QL1_v1.1 | 492,131,402 | 32,914 | 2.03M (63) | VU | n/a | n/a | n/a | fish | |||
| tiger tail seahorse | Hippocampus comes (4) | GCA_001891065.1_H_comes_QL1_v1 | 493,759,415 | 37,376 | 2.03M (63) | 39.55K (3,292) | VU | 109280 | 2016-12-08 | SAMN04531611 | PRJNA314292 | South China Sea Institute of Oceanology, Chinese Academy of Sciences | fish | |
| view | tiger tail seahorse | Hippocampus comes (4) | GCF_001891065.1_H_comes_QL1_v1 | 493,775,940 | 37,377 | 2.03M (63) | 39.55K (3,292) | VU | 109280 | 2016-12-08 | SAMN04531611 | PRJNA314292 | South China Sea Institute of Oceanology, Chinese Academy of Sciences | fish |
| Japanese flounder | Paralichthys olivaceus (5) | GCA_001904815.2_ParOli_1.1 | 545,775,252 | 6,969 | 3.82M (40) | 30.54K (5,224) | 8255 | 2017-03-15 | SAMN05981185 | PRJNA73673 | Yellow Sea Fisheries Research Institute, CAFS | fish | ||
| Japanese flounder | Paralichthys olivaceus (5) | GCA_001970005.2_Flounder_ref_guided_V1.0 | 643,910,695 | 9,525 | 10.55M (21) | 36.69K (4,071) | 8255 | 2017-01-24 | SAMN05817825 | PRJNA344006 | Tsinghua University | fish | ||
| view | Japanese flounder | Paralichthys olivaceus (5) | GCF_001970005.1_Flounder_ref_guided_V1.0 | 643,911,827 | 9,525 | 10.55M (21) | 36.69K (4,071) | 8255 | 2017-01-24 | SAMN05817825 | PRJNA344006 | Tsinghua University | fish | |
| Japanese flounder | Paralichthys olivaceus (5) | GCA_001904815.1_ParOli_1.0 | 534,247,321 | 38,621 | 30.54K (5,224) | 8255 | 2016-12-6 | Yellow Sea Fisheries Research Institute, CAFS | fish | |||||
| bony fishes | Sebastes minor (3) | GCA_001910765.2_ASM191076v2 | 681,652,711 | 166,448 | 7.68K (25,675) | 1.90K (101,340) | 214483 | 2016-12-20 | SAMN03354192 | PRJNA236304 | USC | fish | ||
| bony fishes | Sebastes minor (3) | GCA_916701305.1_S_minor_135284 | 775,604,023 | 44,526 | 64.49K (3,316) | 45.87K (4,736) | 214483 | 2021-11-13 | SAMEA7962368 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| bony fishes | Sebastes minor (3) | GCA_001910765.1_ASM191076v1 | 659,974,356 | 913,843 | 1.80K (106,285) | 214483 | 2016-12-20 | USC | fish | |||||
| bony fishes | Sebastes steindachneri (3) | GCA_001910785.2_ASM191078v2 | 648,011,071 | 279,232 | 4.29K (43,135) | 1.31K (135,633) | 201708 | 2016-12-20 | SAMN03579458 | PRJNA236323 | USC | fish | ||
| bony fishes | Sebastes steindachneri (3) | GCA_916701425.1_S_steindachneri_141714 | 781,033,863 | 77,067 | 27.76K (7,842) | 19.22K (11,534) | 201708 | 2021-10-09 | SAMEA7962404 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| bony fishes | Sebastes steindachneri (3) | GCA_001910785.1_ASM191078v1 | 621,335,377 | 1,260,537 | 1.21K (144,389) | 201708 | 2016-12-20 | USC | fish | |||||
| rougheye rockfish | Sebastes aleutianus (3) | GCA_001910805.2_ASM191080v2 | 899,650,391 | 10,489 | 340.06K (703) | 10.84K (14,983) | 214485 | 2016-12-20 | SAMN03964772 | PRJNA229179 | USC | fish | ||
| rougheye rockfish | Sebastes aleutianus (3) | GCA_916700875.1_S-aleutianus_SEB-111 | 889,524,689 | 726 | 34.13M (12) | 5.85M (38) | 214485 | 2021-09-30 | SAMEA7962319 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| rougheye rockfish | Sebastes aleutianus (3) | GCA_001910805.1_ASM191080v1 | 614,379,116 | 120,735 | 10.24K (15,784) | 214485 | 2016-12-20 | USC | fish | |||||
| swamp eel | Monopterus albus (2) | GCA_001952655.1_M_albus_1.0 | 684,127,526 | 20,621 | 2.11M (87) | 22.24K (8,438) | 43700 | 2017-01-17 | SAMN06219872 | PRJNA183073 | Wuhan University | fish | ||
| view | swamp eel | Monopterus albus (2) | GCF_001952655.1_M_albus_1.0 | 684,144,148 | 20,622 | 2.11M (87) | 22.24K (8,438) | 43700 | 2017-01-17 | SAMN06219872 | PRJNA183073 | Wuhan University | fish | |
| coho salmon | Oncorhynchus kisutch (4) | GCA_002021735.2_Okis_V2 | 2,375,911,594 | 4,087 | 68.27M (15) | 1.16M (458) | 8019 | 2019-11-04 | SAMN05991263 | PRJNA352719 | University of Victoria | fish | ||
| view | coho salmon | Oncorhynchus kisutch (4) | GCF_002021735.2_Okis_V2 | 2,375,911,593 | 4,087 | 68.27M (15) | 1.16M (458) | 8019 | 2019-11-04 | SAMN05991263 | PRJNA352719 | University of Victoria | fish | |
| coho salmon | Oncorhynchus kisutch (4) | GCA_002021735.1_Okis_V1 | 2,369,915,580 | 21,246 | 1.27M (433) | 58.12K (8,653) | 8019 | 2017-03-06 | University of Victoria | fish | ||||
| coho salmon | Oncorhynchus kisutch (4) | GCF_002021735.1_Okis_V1 | 2,369,932,239 | 21,247 | 1.27M (433) | 58.12K (8,653) | 8019 | 2017-03-06 | University of Victoria | fish | ||||
| spiny chromis | Acanthochromis polyacanthus (3) | GCA_002109545.1_ASM210954v1 | 991,584,656 | 30,414 | 334.40K (789) | 16.10K (13,227) | 80966 | 2017-04-25 | SAMN06347167 | PRJNA311159 | King Abdullah University of Science and technology | fish | ||
| view | spiny chromis | Acanthochromis polyacanthus (3) | GCF_002109545.1_ASM210954v1 | 991,584,656 | 30,414 | 334.40K (789) | 16.10K (13,227) | 80966 | 2017-04-25 | SAMN06347167 | PRJNA311159 | King Abdullah University of Science and technology | fish | |
| Murray cod | Maccullochella peelii | GCA_002120245.1_mcod_v1 | 633,241,041 | 18,198 | 109.97K (1,605) | 70.44K (2,510) | 135761 | 2017-05-09 | SAMN03938494 | PRJNA290988 | Monash University Malaysia | fish | ||
| rainbow trout | Oncorhynchus mykiss (7) | GCA_002163495.1_Omyk_1.0 | 2,178,982,971 | 131,960 | 1.67M (259) | 13.83K (32,571) | 8022 | 2017-06-02 | SAMN05449231 | PRJNA335610 | USDA/ARS | fish | ||
| rainbow trout | Oncorhynchus mykiss (7) | GCA_013265735.3_USDA_OmykA_1.1 | 2,341,671,972 | 742 | 39.17M (22) | 15.58M (41) | 8022 | 2020-09-23 | SAMN14537335 | PRJNA623027 | USDA/ARS | fish | ||
| rainbow trout | Oncorhynchus mykiss (7) | GCA_900005705.1_AUL_PRJEB4421_v1 | 1,877,559,488 | 79,850 | 395.54K (955) | 9.39K (43,965) | 8022 | 2014-04-29 | SAMEA3146328 | PRJEB4421 | Genoscope CEA | fish | ||
| rainbow trout | Oncorhynchus mykiss (7) | GCA_905477455.1_MSM_MAG_01 | 663,169 | 28 | 88.88K (4) | 8022 | 2021-04-15 | SAMEA7494057 | PRJEB40990 | CENTER FOR EVOLUTIONARY HOLOGENOMICS | fish | |||
| view | rainbow trout | Oncorhynchus mykiss (7) | GCF_013265735.2_USDA_OmykA_1.1 | 2,341,688,614 | 743 | 39.17M (22) | 15.58M (41) | 8022 | 2020-09-23 | SAMN14537335 | PRJNA623027 | USDA/ARS | fish | |
| Japanese amberjack | Seriola quinqueradiata (3) | GCA_002207885.1_Squ_1.0 | 861,629,195 | 74,780 | 791.85K (327) | 19.67K (7,882) | 8161 | 2017-06-12 | SAMD00068660 | PRJDB5349 | Faculty of Bioresources, Mie university | fish | ||
| Japanese amberjack | Seriola quinqueradiata (3) | GCA_002217815.1_Squ_2.0 | 639,269,536 | 384 | 5.61M (28) | 872.23K (239) | 8161 | 2017-07-05 | SAMD00083042 | PRJDB5854 | Natinal Research Insititute of Aquaculture, FRA | fish | ||
| Japanese amberjack | Seriola quinqueradiata (3) | GCA_003402435.1_Haploid_YT_All_LG_ver.1 | 627,268,966 | 1,394 | 1.43M (127) | 20.86K (8,157) | 8161 | 2018-07-12 | SAMD00098161 | PRJDB6445 | Research Center for Bioinformatics and Biosciences, National Research Institute of Fisheries Science, Japan Fisheries Research and Education Agency | fish | ||
| greater amberjack | Seriola dumerili (2) | GCA_002260705.1_Sdu_1.0 | 677,669,644 | 34,655 | 5.81M (29) | 249.75K (770) | 41447 | 2017-08-03 | SAMD00083043 | PRJDB5856 | Genomic breeding group, Research Center for Aquatic Breeding, National Research Institute of aquaculture, FRA | fish | ||
| view | greater amberjack | Seriola dumerili (2) | GCF_002260705.1_Sdu_1.0 | 677,686,174 | 34,656 | 5.81M (29) | 249.51K (771) | 41447 | 2017-08-03 | SAMD00083043 | PRJDB5856 | Genomic breeding group, Research Center for Aquatic Breeding, National Research Institute of aquaculture, FRA | fish | |
| Florida bass | Micropterus floridanus | GCA_002592385.1_ASM259238v1 | 1,001,521,525 | 249,768 | 10.98K (23,345) | 225391 | 2017-10-19 | SAMN07502010 | PRJNA398142 | Auburn University | fish | |||
| clown anemonefish | Amphiprion ocellaris (3) | GCA_002776465.1_AmpOce1.0 | 880,704,246 | 6,404 | 401.71K (631) | 324.21K (756) | 80972 | 2017-11-16 | SAMN07982614 | PRJNA407816 | Deakin University | fish | ||
| view | clown anemonefish | Amphiprion ocellaris (3) | GCF_002776465.1_AmpOce1.0 | 880,720,895 | 6,405 | 401.71K (631) | 324.21K (756) | 80972 | 2017-11-16 | SAMN07982614 | PRJNA407816 | Deakin University | fish | |
| yellowtail amberjack | Seriola lalandi dorsalis (2) | GCA_002814215.1_Sedor1 | 732,493,304 | 99,597 | 1.27M (153) | 51.35K (3,701) | 1841481 | 2017-12-08 | SAMN04902367 | PRJNA319656 | Iowa State University | fish | ||
| view | yellowtail amberjack | Seriola lalandi dorsalis (2) | GCF_002814215.1_Sedor1 | 732,509,836 | 99,598 | 1.27M (153) | 51.35K (3,701) | 1841481 | 2017-12-08 | SAMN04902367 | PRJNA319656 | Iowa State University | fish | |
| corkwing wrasse | Symphodus melops (2) | GCA_002819105.1_ASM281910v1 | 614,569,099 | 5,060 | 461.65K (343) | 171736 | 2017-12-05 | SAMN06339785 | PRJNA354496 | University of Agder | fish | |||
| corkwing wrasse | Symphodus melops (2) | GCA_900323315.1_ASM90032331v1 | 533,823,763 | 50,156 | 21.27K (6,828) | 9.36K (15,949) | 171736 | 2018-03-26 | SAMEA4028821 | PRJEB12469 | CEES | fish | ||
| Chinook salmon | Oncorhynchus tshawytscha (5) | GCA_002831465.1_CHI06 | 2,362,280,314 | 102,425 | 153.28K (3,679) | 19.11K (28,254) | 74940 | 2017-12-11 | SAMN07614989 | PRJNA402052 | Mathomics and Columbia River Inter-Tribal Fish Commission (CRITFC) | fish | ||
| Chinook salmon | Oncorhynchus tshawytscha (5) | GCA_002872995.1_Otsh_v1.0 | 2,425,697,331 | 14,029 | 1.73M (336) | 133.17K (4,050) | 74940 | 2018-01-16 | SAMN07843558 | PRJNA416144 | Fisheries and Oceans Canada | fish | ||
| Chinook salmon | Oncorhynchus tshawytscha (5) | GCA_018296145.1_Otsh_v2.0 | 2,294,842,546 | 7,664 | 2.88M (202) | 2.88M (202) | 74940 | 2021-05-07 | SAMN17219827 | PRJNA416144 | Fisheries and Oceans Canada | fish | ||
| view | Chinook salmon | Oncorhynchus tshawytscha (5) | GCF_018296145.1_Otsh_v2.0 | 2,294,859,190 | 7,665 | 2.88M (202) | 2.88M (202) | 74940 | 2021-05-07 | SAMN17219827 | PRJNA416144 | Fisheries and Oceans Canada | fish | |
| bony fishes | Paramormyrops kingsleyae (2) | GCA_002872115.1_PKINGS_0.1 | 799,421,083 | 4,667 | 1.73M (134) | 37.66K (5,450) | 1676925 | 2018-01-10 | SAMN08000665 | PRJNA417677 | Michigan State University | fish | ||
| view | bony fishes | Paramormyrops kingsleyae (2) | GCF_002872115.1_PKINGS_0.1 | 799,421,083 | 4,667 | 1.73M (134) | 37.66K (5,450) | 1676925 | 2018-01-10 | SAMN08000665 | PRJNA417677 | Michigan State University | fish | |
| roundnose grenadier | Coryphaenoides rupestris (2) | GCA_002895965.2_CRUPv2 | 838,180,449 | 44,609 | 188.22K (994) | 62.41K (3,029) | CR | 163118 | 2021-06-29 | SAMN08010939 | PRJNA417902 | Centre for Genomic Research | fish | |
| roundnose grenadier | Coryphaenoides rupestris (2) | GCA_002895965.1_ASM289596v1 | 829,208,733 | 47,680 | 159.74K (1,171) | 20.85K (10,225) | CR | 163118 | 2018-01-23 | Molecular Ecology Group, Department of Biosciences, Durham University | fish | |||
| red seabream | Pagrus major | GCA_002897255.1_Pmaj_1.0 | 875,465,402 | 886,260 | 4.64K (35,605) | 2.82K (60,228) | 143350 | 2017-12-28 | SAMD00076252 | PRJDB5593 | Center for Marine Environmental Studies, Ehime University | fish | ||
| bony fishes | Salvelinus sp. IW2-2015 (3) | GCA_002910315.2_ASM291031v2 | 2,169,536,488 | 15,254 | 1.02M (493) | 55.62K (8,430) | 2691554 | 2018-02-12 | SAMN06561764 | PRJNA348349 | University of Victoria | fish | ||
| view | Arctic char | Salvelinus sp. IW2-2015 (3) | GCF_002910315.2_ASM291031v2 | 2,169,553,147 | 15,255 | 1.02M (493) | 55.62K (8,430) | 8036 | 2018-02-12 | SAMN06561764 | PRJNA348349 | University of Victoria | fish | |
| Arctic char | Salvelinus sp. IW2-2015 (3) | GCA_002910315.1_ASM291031v1 | 1,516,033,356 | 39 | 42.87M (13) | 8036 | 2018-02-02 | University of Victoria | fish | |||||
| Indian medaka | Oryzias melastigma (5) | GCA_002922805.2_ASM292280v2 | 778,686,656 | 8,492 | 29.99M (12) | 30.06K (6,936) | 30732 | 2020-04-13 | SAMN07596545 | PRJNA401159 | Sungkyunkwan University | fish | ||
| Indian medaka | Oryzias melastigma (5) | GCA_014170095.1_ASM1417009v1 | 844,166,318 | 1,257 | 1.71M (151) | 707.79K (314) | 30732 | 2020-08-12 | SAMN12368440 | PRJNA556761 | Xiamen University | fish | ||
| view | Indian medaka | Oryzias melastigma (5) | GCF_002922805.2_ASM292280v2 | 778,703,520 | 8,493 | 29.99M (12) | 30.06K (6,936) | 30732 | 2020-04-13 | SAMN07596545 | PRJNA401159 | Sungkyunkwan University | fish | |
| Indian medaka | Oryzias melastigma (5) | GCA_002922805.1_Om_v0.7.RACA | 779,452,910 | 8,602 | 23.74M (14) | 30.06K (6,936) | 30732 | 2018-02-07 | Sungkyunkwan University | fish | ||||
| view | Indian medaka | Oryzias melastigma (5) | GCF_002922805.1_Om_v0.7.RACA | 779,469,774 | 8,603 | 23.74M (14) | 30.06K (6,936) | 30732 | 2018-02-07 | Sungkyunkwan University | fish | |||
| Almaco jack | Seriola rivoliana | GCA_002994505.1_ASM299450v1 | 666,141,578 | 1,343 | 9.51M (23) | 740.11K (263) | 173321 | 2018-03-12 | SAMN08545647 | PRJNA434264 | Iowa State University | fish | ||
| orange clownfish | Amphiprion percula (2) | GCA_003047355.2_Nemo_v1.1 | 908,955,932 | 366 | 38.42M (12) | 3.12M (84) | 161767 | 2018-11-28 | SAMN08615572 | PRJNA436093 | King Abdullah University of Science and Technology | fish | ||
| orange clownfish | Amphiprion percula (2) | GCA_003047355.1_Nemo_v1 | 908,939,294 | 365 | 38.42M (12) | 161767 | 2018-4-10 | King Abdullah University of Science and Technology | fish | |||||
| yellowtail amberjack | Seriola lalandi | GCA_003054885.1_wag_ytk_001 | 766,364,468 | 7,606 | 411.62K (457) | 37.71K (4,002) | 302047 | 2018-04-17 | SAMN04544729 | PRJNA314866 | Wageningen University | fish | ||
| western mosquitofish | Gambusia affinis (3) | GCA_003097735.1_ASM309773v1 | 598,663,367 | 2,943 | 6.65M (26) | 17.51K (9,490) | 33528 | 2018-05-08 | SAMN07157452 | PRJNA386810 | University of Georgia | fish | ||
| western mosquitofish | Gambusia affinis (3) | GCA_019740435.1_SWU_Gaff_1.0 | 680,149,392 | 36 | 29.76M (11) | 12.91M (17) | 33528 | 2021-08-25 | SAMN13752108 | PRJNA599452 | Southwest University | fish | ||
| view | western mosquitofish | Gambusia affinis (3) | GCF_019740435.1_SWU_Gaff_1.0 | 680,166,006 | 37 | 29.76M (11) | 12.91M (17) | 33528 | 2021-08-25 | SAMN13752108 | PRJNA599452 | Southwest University | fish | |
| turbot | Scophthalmus maximus (8) | GCA_003186165.1_ASM318616v1 | 524,979,463 | 22 | 24.81M (10) | 54.84K (2,472) | 52904 | 2018-06-05 | SAMN08049846 | PRJEB11743 | CNAG | fish | ||
| turbot | Scophthalmus maximus (8) | GCA_006346445.1_Turbot_ysfricsl_Female_v1.0 | 568,466,451 | 28,256 | 25.17M (11) | 27.89K (5,268) | 52904 | 2019-06-14 | SAMN11618026 | PRJNA542243 | Yellow Sea Fisheries Research Institute | fish | ||
| turbot | Scophthalmus maximus (8) | GCA_006346465.1_ASM634646v1 | 587,187,767 | 9,724 | 5.93M (31) | 45.26K (3,583) | 52904 | 2019-06-14 | SAMN11618027 | PRJNA542243 | Yellow Sea Fisheries Research Institute | fish | ||
| turbot | Scophthalmus maximus (8) | GCA_009764425.1_turbot | 568,428,014 | 28,739 | 6.11M (28) | 27.89K (5,269) | 52904 | 2019-12-18 | SAMN05890600 | PRJNA347492 | Yellow Sea Fisheries Research Institute | fish | ||
| turbot | Scophthalmus maximus (8) | GCA_013347765.1_ASM1334776v1 | 556,679,315 | 126 | 25.95M (10) | 20.47M (11) | 52904 | 2020-06-18 | SAMN14896287 | PRJNA631898 | CIGENE | fish | ||
| view | turbot (ysfricsl-2021 2022) | Scophthalmus maximus (8) | GCF_022379125.1_ASM2237912v1 | 538,234,718 | 28 | 25.76M (10) | n/a | n/a | n/a | fish | ||||
| Atlantic bluefin tuna | Thunnus thynnus | GCA_003231725.1_GBYP_Tthy_1.0 | 648,208,697 | 354,425 | 3.04K (60,023) | 2.43K (75,574) | 8237 | 2018-06-15 | SAMN08408184 | PRJNA432036 | Alessia Cariani's shared submissions | fish | ||
| gilthead seabream | Sparus aurata (5) | GCA_003309015.1_ASM330901v1 | 830,381,975 | 34,642 | 20.61M (18) | 32.41K (6,396) | 8175 | 2018-07-19 | SAMN09603368 | PRJNA416845 | University of Padova | fish | ||
| gilthead seabream | Sparus aurata (5) | GCA_900880675.2_fSpaAur1.2 | 833,595,063 | 176 | 35.79M (11) | 2.86M (75) | 8175 | 2021-04-24 | SAMEA104384835 | PRJEB31901 | Wellcome Sanger Institute | fish | ||
| view | gilthead seabream | Sparus aurata (5) | GCA_900880695.1_fSpaAur1.1_alternate_haplotype | 668,417,842 | 7,239 | 152.84K (1,184) | 152.71K (1,184) | 8175 | 2019-07-11 | SAMEA104384835 | PRJEB31902 | SC | fish | |
| view | gilthead seabream | Sparus aurata (5) | GCF_900880675.1_fSpaAur1.1 | 833,595,063 | 176 | 35.79M (11) | 2.86M (75) | 8175 | 2019-07-30 | SAMEA104384835 | PRJEB31901 | SC | fish | |
| gilthead seabream | Sparus aurata (5) | GCA_900880675.1_fSpaAur1.1 | 833,578,411 | 175 | 35.79M (11) | 2.86M (75) | 8175 | 2019-07-30 | SC | fish | ||||
| huchen | Hucho hucho | GCA_003317085.1_ASM331708v1 | 2,487,549,814 | 71,639 | 287.34K (1,868) | 37.64K (12,736) | EN | 62062 | 2018-07-13 | SAMN09378492 | PRJNA475010 | University Of Aberdeen | fish | |
| bony fishes | Ageneiosus marmoratus | GCA_003347165.1_ASM334716v1 | 1,030,000,983 | 16,063 | 223.14K (998) | 7.74K (19,230) | 2066578 | 2018-07-31 | SAMN08271869 | PRJNA427361 | Auburn University | fish | ||
| goldfish | Carassius auratus (6) | GCA_003368295.1_ASM336829v1 | 1,820,635,051 | 6,216 | 22.76M (32) | 821.15K (513) | 7957 | 2018-08-09 | SAMN09670328 | PRJNA481500 | National Institutes of Health | fish | ||
| goldfish | Carassius auratus (6) | GCA_013115835.1_ASM1311583v1 | 2,197,795,230 | 1,531,383 | 8.22K (59,653) | 7.77K (69,846) | 7957 | 2020-06-09 | SAMN13497183 | PRJNA592334 | National Institute of Agricultural Research(INRA) | fish | ||
| goldfish | Carassius auratus (6) | GCA_014332655.1_ASM1433265v1 | 1,739,639,290 | 1,769 | 31.84M (23) | 483.44K (869) | 7957 | 2020-08-31 | SAMN12618612 | PRJNA561458 | Fujian agriculture and forestry university | fish | ||
| view | goldfish | Carassius auratus (6) | GCF_003368295.1_ASM336829v1 | 1,820,635,050 | 6,216 | 22.76M (32) | 7957 | 2018-08-09 | SAMN09670328 | PRJNA481500 | National Institutes of Health | fish | ||
| ninespine stickleback | Pungitius pungitius (6) | GCA_003399555.1_ASM339955v1 | 441,089,565 | 7,847 | 302.68K (323) | 14.14K (7,145) | 134920 | 2018-08-16 | SAMN05210078 | PRJNA324574 | University of Utah | fish | ||
| ninespine stickleback | Pungitius pungitius (6) | GCA_003935095.1_ASM393509v1 | 463,371,116 | 170,960 | 12.69K (8,343) | 11.58K (9,522) | 134920 | 2018-12-14 | SAMN08331111 | PRJNA429208 | University of Oregon | fish | ||
| ninespine stickleback | Pungitius pungitius (6) | GCA_902500615.3_NSP_V7 | 466,582,808 | 1,666 | 20.45M (10) | 2.78M (50) | 134920 | 2020-10-12 | SAMEA5986199 | PRJEB33823 | UNIVERSITY OF OSLO | fish | ||
| view | ninespine stickleback | Pungitius pungitius (6) | GCF_902500615.1_NSP_V7 | 466,599,196 | 1,667 | 20.45M (10) | 2.78M (50) | 134920 | 2020-10-12 | SAMEA5986199 | PRJEB33823 | UNIVERSITY OF OSLO | fish | |
| ninespine stickleback | Pungitius pungitius (6) | GCA_902500615.1_NSP_V6 | 521,233,387 | 4,638 | 19.29M (11) | 1.20M (119) | 134920 | 2019-11-28 | UNIVERSITY OF OSLO | fish | ||||
| European perch | Perca fluviatilis (4) | GCA_003412525.1_UTU_Pfluv_1.1 | 958,225,486 | 31,105 | 6.26M (35) | 18.20K (12,991) | 8168 | 2018-08-22 | SAMN08954933 | PRJNA450919 | University of Turku | fish | ||
| European perch | Perca fluviatilis (4) | GCA_010015445.1_GENO_Pfluv_1.0 | 951,362,726 | 304 | 39.55M (11) | 4.20M (57) | 8168 | 2020-01-30 | SAMN12071746 | PRJNA549142 | SEX'PERCH | fish | ||
| European perch | Perca fluviatilis (4) | GCA_900302645.1_ASM90030264v1 | 630,662,671 | 140,281 | 5.97K (31,191) | 4.14K (47,215) | 8168 | 2018-03-19 | SAMEA4028817 | PRJEB12469 | CEES | fish | ||
| view | European perch | Perca fluviatilis (4) | GCF_010015445.1_GENO_Pfluv_1.0 | 951,345,774 | 303 | 39.55M (11) | 4.20M (57) | 8168 | 2020-01-30 | SAMN12071746 | PRJNA549142 | SEX'PERCH | fish | |
| barred knifejaw | Oplegnathus fasciatus | GCA_003416845.1_ASM341684v1 | 766,301,214 | 4,149 | 1.13M (203) | 29.99K (6,834) | 163134 | 2018-08-22 | SAMN07331350 | PRJNA393383 | National Institute of Fisheries Science | fish | ||
| bony fishes | Oxygymnocypris stewartii | GCA_003573665.1_Novo_Ost_1.0 | 1,849,224,471 | 26,281 | 257.09K (1,104) | 257.09K (1,104) | 361644 | 2018-09-18 | SAMN09762613 | PRJNA485858 | Novogene Bioinformatics Technology Corporation | fish | ||
| sardine | Sardina pilchardus (3) | GCA_003604335.1_UP_Spi | 641,491,539 | 45,321 | 25.58K (6,803) | 10.88K (17,893) | 27697 | 2018-10-01 | SAMN09664902 | PRJNA481265 | CIIMAR - Interdisciplinary Centre of Marine and Environmental Research | fish | ||
| sardine | Sardina pilchardus (3) | GCA_900499035.1_SP_G | 949,617,276 | 117,259 | 96.62K (903) | 9.40K (20,965) | 27697 | 2018-09-24 | SAMEA4809151 | PRJEB27990 | CCMAR | fish | ||
| white bass | Morone chrysops (2) | GCA_003610055.1_DOM152_MoChry_1.0 | 620,984,155 | 84,096 | 51.93K (3,230) | 20.32K (8,500) | 46259 | 2018-10-02 | SAMN10103279 | PRJNA492499 | Auburn University | fish | ||
| white bass | Morone chrysops (2) | GCA_019097615.1_DOM_MoChry_2.0 | 640,404,081 | 12,898 | 28.02M (11) | 14.07K (12,781) | 46259 | 2021-07-02 | SAMN18623892 | PRJNA719914 | North Carolina State University | fish | ||
| Siamese fighting fish | Betta splendens (8) | GCA_003650155.1_ASM365015v1 | 456,232,186 | 12,333 | 19.75M (10) | 38.05K (3,147) | VU | 158456 | 2018-10-15 | SAMN07955939 | PRJNA416843 | BGI | fish | |
| Siamese fighting fish | Betta splendens (8) | GCA_013403625.1_Bspl.v1.2018 | 440,784,772 | 109 | 20.67M (9) | 2.17M (62) | VU | 158456 | 2020-07-13 | SAMN13419572 | PRJNA592275 | LOEWE Centre for Translational Biodiversity Genomics (LOEWE-TBG) | fish | |
| Siamese fighting fish | Betta splendens (8) | GCA_900634795.3_fBetSpl5.3 | 441,371,523 | 69 | 20.13M (9) | 2.50M (48) | VU | 158456 | 2020-08-25 | SAMEA104381735 | PRJEB30365 | SC | fish | |
| view | Siamese fighting fish | Betta splendens (8) | GCA_900651605.1_fBetSpl5.1_alternate_haplotype | 426,643,682 | 3,705 | 316.93K (302) | 316.50K (302) | VU | 158456 | 2019-02-07 | SAMEA104381735 | PRJEB30366 | SC | fish |
| view | Siamese fighting fish | Betta splendens (8) | GCF_900634795.3_fBetSpl5.3 | 441,388,503 | 70 | 20.13M (9) | 2.50M (48) | VU | 158456 | 2020-08-25 | SAMEA104381735 | PRJEB30365 | SC | fish |
| view | Siamese fighting fish | Betta splendens (8) | GCF_900634795.2_fBetSpl5.2 | 441,388,503 | 70 | 20.13M (9) | 20.13M (9) | VU | 158456 | 2019-03-20 | SC | fish | ||
| Hilsa shad | Tenualosa ilisha (3) | GCA_003651195.1_ASM365119v1 | 815,647,530 | 124,209 | 188.03K (975) | 129.89K (1,470) | 373995 | 2018-10-15 | SAMN10026359 | PRJNA490156 | Molecular Biology Lab | fish | ||
| Hilsa shad | Tenualosa ilisha (3) | GCA_004329175.1_BAU_Tilisha_2.1 | 710,279,582 | 100,181 | 64.16K (2,715) | 1.09K (128,985) | 373995 | 2019-03-06 | SAMN07556897 | PRJNA400122 | Bangladesh Agricultural University | fish | ||
| Hilsa shad | Tenualosa ilisha (3) | GCA_015244755.2_TenIli1.0 | 908,833,095 | 6,910 | 2.01M (115) | 373995 | 2020-11-05 | SAMN08162886 | PRJNA422030 | Consortium Research Platform on Genmics, ICAR, India | fish | |||
| electric eel | Electrophorus electricus (6) | GCA_003665695.2_Ee_SOAP_WITH_SSPACE | 551,880,868 | 8,786 | 613.96K (238) | 37.14K (3,868) | 8005 | 2018-10-30 | SAMN02802636 | PRJNA249073 | University of Wisconsin Madison | fish | ||
| electric eel | Electrophorus electricus (6) | GCA_013347915.1_fEleEle1.alt | 428,136,346 | 2,629 | 216.15K (622) | 8005 | 2020-06-12 | SAMN12623625 | PRJNA561982 | Vertebrate Genomes Project | fish | |||
| electric eel | Electrophorus electricus (6) | GCA_013358815.1_fEleEle1.pri | 589,376,265 | 90 | 25.66M (10) | 7.06M (25) | 8005 | 2020-06-23 | SAMN12623625 | PRJNA561981 | Vertebrate Genomes Project | fish | ||
| view | electric eel | Electrophorus electricus (6) | GCF_013358815.1_fEleEle1.pri | 589,358,956 | 89 | 25.66M (10) | 7.06M (25) | 8005 | 2020-06-23 | SAMN12623625 | PRJNA561981 | Vertebrate Genomes Project | fish | |
| electric eel | Electrophorus electricus (6) | GCA_003665695.1_Eelec_Soap_1.0 | 550,569,596 | 45,003 | 106.30K (1,485) | 8005 | 2018-10-17 | University of Wisconsin Madison | fish | |||||
| striped catfish | Pangasianodon hypophthalmus (5) | GCA_003671635.1_VN_pangasius | 715,776,656 | 568 | 14.29M (18) | 62.52K (3,254) | EN | 310915 | 2018-10-22 | SAMN08866743 | PRJNA448819 | Institute of Genome Research, Vietnam Academy of Science and Technology | fish | |
| striped catfish | Pangasianodon hypophthalmus (5) | GCA_009078355.1_GENO_Phyp_1.0 | 758,990,195 | 151 | 26.46M (13) | 16.19M (18) | EN | 310915 | 2019-10-22 | SAMN11969507 | PRJNA547555 | GenoFish | fish | |
| striped catfish | Pangasianodon hypophthalmus (5) | GCA_016801045.1_ASM1680104v1 | 742,562,378 | 402 | 29.53M (11) | 3.48M (63) | EN | 310915 | 2021-02-04 | SAMN16435360 | PRJNA669124 | BGI Marine | fish | |
| view | striped catfish | Pangasianodon hypophthalmus (5) | GCF_009078355.1_GENO_Phyp_1.0 | 758,973,678 | 150 | 26.46M (13) | 16.19M (18) | EN | 310915 | 2019-10-22 | SAMN11969507 | PRJNA547555 | GenoFish | fish |
| yellow catfish | Tachysurus fulvidraco (5) | GCA_003724035.1_ASM372403v1 | 713,794,198 | 662 | 3.65M (51) | 980.45K (162) | 1234273 | 2018-11-13 | SAMN10147840 | PRJNA494039 | BGI-SZ | fish | ||
| view | yellow catfish (hzauxx_2018 2022) | Tachysurus fulvidraco (5) | GCF_022655615.1_HZAU_PFXX_2.0 | 712,016,913 | 517 | 27.16M (11) | n/a | n/a | n/a | fish | ||||
| bony fishes | Anabarilius grahami | GCA_003731715.1_BGI_Agra_1.0 | 991,887,266 | 80,398 | 4.46M (60) | 36.06K (7,861) | 495550 | 2018-11-15 | SAMN09469597 | PRJNA477399 | BGI | fish | ||
| walking catfish | Clarias batrachus | GCA_003987875.1_ASM398787v1 | 821,750,104 | 10,042 | 361.12K (611) | 24.89K (8,094) | 59899 | 2018-12-31 | SAMN09480820 | PRJNA477835 | Auburn University | fish | ||
| javanese ricefish | Oryzias javanicus | GCA_003999625.1_OJAV_1.1 | 809,679,899 | 254 | 35.39M (11) | 3.56M (65) | 123683 | 2019-01-08 | SAMN10417210 | PRJNA505405 | INRA (Fish Physiology and Genomics laboratory) | fish | ||
| spotted sea bass | Lateolabrax maculatus | GCA_004023545.1_ASM402354v1 | 519,239,411 | 24 | 22.34M (11) | 42.65K (3,546) | 315492 | 2019-01-15 | SAMN07680090 | PRJNA408177 | BGI | fish | ||
| bony fishes | Takifugu bimaculatus (2) | GCA_004026145.2_XU_Tbim_1.0 | 404,311,738 | 1,158 | 16.79M (11) | 1.31M (83) | 433685 | 2019-06-21 | SAMN10524747 | PRJNA508537 | College of Ocean and Earth Sciences, Xiamen University | fish | ||
| bony fishes | Takifugu bimaculatus (2) | GCA_004026145.1_ASM402614v1 | 371,675,663 | 22 | 16.79M (10) | 1.40M (71) | 433685 | 2019-01-16 | College of Ocean and Earth Sciences, Xiamen University | fish | ||||
| mud carp | Cirrhinus molitorella | GCA_004028445.1_ASM402844v1 | 920,272,578 | 478,313 | 4.20K (59,433) | 2.74K (90,906) | 172907 | 2019-01-17 | SAMN10663080 | PRJNA511029 | Xiamen University | fish | ||
| big head croaker | Collichthys lucidus (3) | GCA_004119915.2_ASM411991v2 | 877,615,421 | 854 | 35.92M (12) | 1.10M (210) | 240159 | 2019-01-30 | SAMN10225518 | PRJNA495441 | JiMei University | fish | ||
| big head croaker | Collichthys lucidus (3) | GCA_009852395.1_ASM985239v1 | 671,994,863 | 77,375 | 663.85K (256) | 12.65K (13,437) | 240159 | 2020-01-10 | SAMN13155762 | PRJNA580353 | Zhejiang Ocean University | fish | ||
| big head croaker | Collichthys lucidus (3) | GCA_004119915.1_ASM411991v1 | 877,615,421 | 854 | 35.92M (12) | 1.10M (210) | 240159 | 2019-01-30 | JiMei University | fish | ||||
| rohu | Labeo rohita (3) | GCA_004120215.1_ASM412021v1 | 1,484,730,970 | 13,623 | 1.96M (193) | 522.83K (548) | 84645 | 2019-01-30 | SAMN08685245 | PRJNA437789 | Central Institute of Freshwater Aquaculture | fish | ||
| rohu | Labeo rohita (3) | GCA_017311145.1_HRRL_Labeo_rohita_001 | 1,484,640,579 | 13,660 | 1.96M (193) | 522.83K (548) | 84645 | 2021-03-09 | SAMN16965599 | PRJNA657820 | University of Chittagong (HRRL); Chittagong Veterinary and Animal Sciences University | fish | ||
| bony fishes | Poropuntius huangchuchieni | GCA_004124795.1_ASM412479v1 | 760,177,161 | 625,277 | 2.93K (55,105) | 2.27K (71,027) | 357532 | 2019-01-31 | SAMN10662616 | PRJNA511031 | Xiamen University | fish | ||
| bighead carp | Hypophthalmichthys nobilis (2) | GCA_004193235.1_HypNob1.0 | 1,012,063,666 | 121,326 | 83.01K (3,470) | 4.84K (53,952) | 7965 | 2019-02-12 | SAMN04317176 | PRJNA305141 | University of Nebraska at Omaha | fish | ||
| bighead carp | Hypophthalmichthys nobilis (2) | GCA_019925145.1_ASM1992514v1 | 857,045,951 | 32 | 33.75M (11) | 23.57M (14) | 7965 | 2021-09-14 | SAMN15835045 | PRJNA657698 | Chinese Academy of Sciences | fish | ||
| Schlegel's black rockfish | Sebastes schlegelii (3) | GCA_004335315.1_ASM433531v1 | 728,476,695 | 146,105 | 14.25K (14,047) | 214486 | 2019-03-08 | SAMN10490953 | PRJNA511689 | Zhejiang Ocean University | fish | |||
| Schlegel's black rockfish | Sebastes schlegelii (3) | GCA_014673565.1_ASM1467356v1 | 848,024,649 | 741 | 7.94M (34) | 5.47M (44) | 214486 | 2020-09-21 | SAMN10781578 | PRJNA516036 | Qingdao Agricultural University | fish | ||
| Schlegel's black rockfish | Sebastes schlegelii (3) | GCA_916701485.1_S_schlegelii_139475 | 780,300,539 | 42,857 | 77.24K (2,782) | 54.28K (4,070) | 214486 | 2021-11-13 | SAMEA7962400 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| bony fishes | Sebastes koreanus (2) | GCA_004335335.1_ASM433533v1 | 725,092,264 | 147,157 | 16.66K (11,104) | 290523 | 2019-03-08 | SAMN10490951 | PRJNA511689 | Zhejiang Ocean University | fish | |||
| bony fishes | Sebastes koreanus (2) | GCA_916701025.1_S_koreanus_134992 | 782,186,411 | 61,392 | 42.72K (5,041) | 34.32K (6,268) | 290523 | 2021-10-09 | SAMEA7962356 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| ogon-murasoi | Sebastes nudus (2) | GCA_004335365.1_ASM433536v1 | 724,045,237 | 180,312 | 11.29K (17,222) | 1617787 | 2019-03-08 | SAMN10490952 | PRJNA511689 | Zhejiang Ocean University | fish | |||
| ogon-murasoi | Sebastes nudus (2) | GCA_916701225.1_S_nudus_133427 | 795,486,752 | 42,245 | 89.61K (2,441) | 64.96K (3,378) | 1617787 | 2021-11-13 | SAMEA7962376 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| bony fishes | Pseudoliparis sp. Yap Trench | GCA_004335475.1_ASM433547v1 | 840,640,641 | 3,134 | 976.17K (209) | 523.85K (298) | 2499240 | 2019-03-08 | SAMN10662039 | PRJNA512070 | BGI-SZ | fish | ||
| grayling | Thymallus thymallus (3) | GCA_004348285.1_ASM434828v1 | 1,564,834,359 | 3,831 | 32.99M (21) | 31.77K (12,082) | 36185 | 2019-03-19 | SAMN09080809 | PRJNA464295 | University of Turku | fish | ||
| yellow perch | Perca flavescens (3) | GCA_004354835.1_PFLA_1.0 | 877,439,799 | 267 | 37.41M (11) | 4.27M (61) | 8167 | 2019-03-19 | SAMN10722690 | PRJNA514308 | INRA (Fish Physiology and Genomics laboratory) | fish | ||
| yellow perch | Perca flavescens (3) | GCA_013375545.1_MU_Pfla_1.0 | 972,456,123 | 1,876 | 3.47M (75) | 8167 | 2020-06-29 | SAMN15198649 | PRJNA638629 | McGill University | fish | |||
| view | yellow perch | Perca flavescens (3) | GCF_004354835.1_PFLA_1.0 | 877,456,336 | 268 | 37.41M (11) | 37.41M (11) | 8167 | 2019-03-19 | SAMN10722690 | PRJNA514308 | INRA (Fish Physiology and Genomics laboratory) | fish | |
| wolf-eel | Anarrhichthys ocellatus (2) | GCA_004355925.1_GSC_Weel_1.0 | 612,774,492 | 10,816 | 5.72M (30) | 41.76K (3,667) | 433405 | 2019-03-08 | SAMN10245424 | PRJNA496475 | Canada's Genomic Enterprise | fish | ||
| view | wolf-eel | Anarrhichthys ocellatus (2) | GCF_004355925.1_GSC_Weel_1.0 | 612,790,998 | 10,817 | 5.72M (30) | 41.76K (3,667) | 433405 | 2019-03-08 | SAMN10245424 | PRJNA496475 | Canada's Genomic Enterprise | fish | |
| bony fishes | Ophiodon elongatus (2) | GCA_004358465.1_GSC_LCod_1.0 | 635,567,917 | 18,379 | 5.09M (34) | 31.24K (5,005) | 225387 | 2019-03-08 | SAMN10245457 | PRJNA496476 | Canada's Genomic Enterprise | fish | ||
| bony fishes | Ophiodon elongatus (2) | GCA_016806645.1_NWFSC_Oelon_r3.mflye | 645,892,281 | 2,175 | 1.75M (95) | 1.54M (104) | 225387 | 2021-02-03 | SAMN13559843 | PRJNA595583 | UC Santa Cruz | fish | ||
| silver carp | Hypophthalmichthys molitrix (2) | GCA_004764525.1_HypMol1.0 | 1,104,676,189 | 107,095 | 314.18K (855) | 2.13K (112,078) | 13095 | 2019-04-09 | SAMN04317213 | PRJNA305140 | University of Nebraska at Omaha | fish | ||
| northern snakehead | Channa argus (2) | GCA_004786185.1_ASM478618v1 | 644,129,659 | 562 | 27.76M (11) | 11.79M (18) | 215402 | 2019-04-15 | SAMN10910622 | PRJNA522012 | Gooalgene | fish | ||
| northern snakehead | Channa argus (2) | GCA_018997905.1_ASM1899790v1 | 623,704,440 | 494 | 28.03M (10) | 13.29M (15) | 215402 | 2021-06-24 | SAMN19290751 | PRJNA731586 | Chinese Academy of Sciences | fish | ||
| so-iny mullet | Planiliza haematocheilus | GCA_005024645.1_Liza_haematocheila_0.1 | 747,342,729 | 1,453 | 3.97M (43) | 370040 | 2019-05-01 | SAMN11356700 | PRJNA531337 | Jeju National University | fish | |||
| giant grouper | Epinephelus lanceolatus (3) | GCA_005281545.1_ASM528154v1 | 1,087,399,367 | 4,200 | 46.23M (11) | 159.80K (1,795) | 310571 | 2019-05-13 | SAMN10786578 | PRJNA516312 | Yellow Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences | fish | ||
| giant grouper | Epinephelus lanceolatus (3) | GCA_017165655.1_SYSU_Elan_1.1 | 1,064,070,808 | 69 | 45.21M (11) | 24.33M (15) | 310571 | 2021-03-04 | SAMN17126497 | PRJNA686844 | Sun Yat-sen University | fish | ||
| view | giant grouper | Epinephelus lanceolatus (3) | GCF_005281545.1_ASM528154v1 | 1,087,415,941 | 4,201 | 46.23M (11) | 159.80K (1,795) | 310571 | 2019-05-13 | SAMN10786578 | PRJNA516312 | Yellow Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences | fish | |
| Macquarie perch | Macquaria australasica | GCA_005408345.1_DU_Maus_v1.0 | 675,976,139 | 2,962 | 845.51K (218) | 678.98K (266) | EN | 135765 | 2019-05-16 | SAMN10817714 | PRJNA516983 | Deakin University | fish | |
| goonch | Bagarius yarrelli | GCA_005784505.1_ASM578450v1 | 570,806,968 | 541 | 3.13M (50) | 1.85M (81) | VU | 175774 | 2019-05-22 | SAMN10979322 | PRJNA523489 | Shenzhen Key Lab of Marine Genomics | fish | |
| blue tilapia | Oreochromis aureus (5) | GCA_005870065.1_ASM587006v1 | 918,937,175 | 12,951 | 1.10M (229) | 60.34K (3,483) | 47969 | 2019-05-28 | SAMN11513266 | PRJNA539829 | BGI-SZ ocean institute | fish | ||
| blue tilapia | Oreochromis aureus (5) | GCA_013358895.1_ZZ_aureus | 1,005,558,595 | 303 | 40.72M (10) | 4.18M (65) | 47969 | 2020-06-19 | SAMN14256941 | PRJNA609616 | University of Vienna | fish | ||
| blue tilapia | Oreochromis aureus (5) | GCA_016625535.1_ASM1662553v1 | 1,237,756,756 | 1,862 | 43.14M (10) | 2.26M (118) | 47969 | 2021-01-19 | SAMN13016751 | PRJNA577007 | Guangxi Academy of Fishery Sciences | fish | ||
| view | blue tilapia | Oreochromis aureus (5) | GCF_013358895.1_ZZ_aureus | 1,005,575,223 | 304 | 40.72M (10) | 4.18M (65) | 47969 | 2020-06-19 | SAMN14256941 | PRJNA609616 | University of Vienna | fish | |
| bony fishes | Triplophysa siluroides | GCA_006030095.1_ASM603009v1 | 583,428,323 | 1,002 | 2.87M (53) | 2.55M (60) | 422203 | 2019-06-05 | SAMN11775600 | PRJNA543715 | Institute of Hydrobiology | fish | ||
| view | sockeye salmon (On170113-E2 v2 2019) | Oncorhynchus nerka (4) | GCF_006149115.2_Oner_1.1 | 1,925,212,521 | 34,757 | 47.83M (16) | n/a | n/a | n/a | fish | ||||
| sockeye salmon | Oncorhynchus nerka (4) | GCA_006149115.1_Oner_1.0 | 1,927,125,257 | 36,123 | 1.06M (374) | 329.58K (1,232) | 8023 | 2019-06-07 | SAMN11519041 | PRJNA530256 | Fisheries and Oceans Canada | fish | ||
| view | sockeye salmon | Oncorhynchus nerka (4) | GCF_006149115.1_Oner_1.0 | 1,927,141,915 | 36,124 | 47.83M (16) | 47.83M (16) | 8023 | 2019-06-07 | SAMN11519041 | PRJNA530256 | Fisheries and Oceans Canada | fish | |
| Greenland flounder | Reinhardtius hippoglossoides (3) | GCA_006182925.3_UL_REHI_2.0 | 598,525,361 | 1,590 | 25.02M (11) | 3.11M (59) | 111784 | 2021-05-25 | SAMN11811143 | PRJNA499109 | McGill University | fish | ||
| Greenland flounder | Reinhardtius hippoglossoides (3) | GCA_006182925.1_ASM618292v1 | 677,654,051 | 4,453 | 17.64M (16) | 770.36K (225) | 111784 | 2019-06-10 | McGill University | fish | ||||
| Greenland flounder | Reinhardtius hippoglossoides (3) | GCA_006182925.2_MU_Rhippo_v1 | 677,540,803 | 4,453 | 17.64M (16) | 775.26K (219) | 111784 | 2019-07-25 | McGill University | fish | ||||
| Tanaka's snailfish | Liparis tanakae | GCA_006348945.1_SNU_Ltan_1.0 | 498,979,456 | 27,878 | 375.22K (325) | 9.90K (12,075) | 230148 | 2019-06-14 | SAMN10970109 | PRJNA523297 | Seoul National University | fish | ||
| kelp grouper | Epinephelus moara | GCA_006386435.1_YSFRI_EMoa_1.0 | 1,030,460,988 | 4,562 | 43.43M (11) | 76.17K (3,350) | 300413 | 2019-06-26 | SAMN11657372 | PRJNA543191 | Yellow Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences | fish | ||
| golden panchax | Pachypanchax playfairii | GCA_006937955.1_MPIBA_Ppla_1.0 | 669,774,067 | 4,488 | 3.17M (61) | 76.64K (2,448) | 52664 | 2019-07-12 | SAMN11370848 | PRJNA531796 | Max Planck Institute for Biology of Ageing | fish | ||
| bony fishes | Callopanchax toddi | GCA_006937965.1_MPIBA_Ctod_1.0 | 853,385,936 | 9,724 | 1.66M (137) | 52.01K (4,197) | 60409 | 2019-07-12 | SAMN11370820 | PRJNA531796 | Max Planck Institute for Biology of Ageing | fish | ||
| lyretail killifish | Aphyosemion australe | GCA_006937985.1_MPIBA_Aaus_1.0 | 868,348,903 | 12,236 | 1.44M (162) | 119.47K (1,783) | 52653 | 2019-07-12 | SAMN11370804 | PRJNA531796 | Max Planck Institute for Biology of Ageing | fish | ||
| Beira killifish | Nothobranchius kuhntae | GCA_006942095.1_MPIBA_Nkuh_1.0 | 1,122,656,415 | 34,756 | 1.18M (266) | 22.23K (14,250) | 321403 | 2019-07-12 | SAMN11370845 | PRJNA531796 | Max Planck Institute for Biology of Ageing | fish | ||
| round goby | Neogobius melanostomus | GCA_007210695.1_RGoby_Basel_V2 | 1,003,738,541 | 1,364 | 2.82M (88) | 47308 | 2019-07-22 | SAMN12099445 | PRJNA549924 | University of Basel | fish | |||
| bony fishes | Danionella translucida (2) | GCA_007224835.1_ASM722483v1 | 735,303,417 | 27,639 | 340.82K (604) | 133.13K (1,490) | 623744 | 2019-07-22 | SAMN11288624 | PRJNA445947 | Charite - Universitatsmedizin Berlin | fish | ||
| bony fishes | Danionella translucida (2) | GCA_903798025.1_fDanTra1.1 | 657,501,202 | 11,408 | 6.53M (29) | 53.45K (3,371) | 623744 | 2020-06-16 | SAMEA104129915 | PRJEB38563 | SC | fish | ||
| view | flier cichlid | Archocentrus centrarchus (4) | GCA_007364235.1_fArcCen1_v1.h | 1,034,011,644 | 9,292 | 456.96K (590) | 455.56K (591) | 63155 | 2019-07-24 | SAMN09948522 | PRJNA489130 | Vertebrate Genomes Project | fish | |
| view | flier cichlid | Archocentrus centrarchus (4) | GCA_007364275.2_fArcCen1 | 932,947,025 | 189 | 35.59M (13) | 2.15M (129) | 63155 | 2019-08-01 | SAMN09948522 | PRJNA489129 | Vertebrate Genomes Project | fish | |
| view | flier cichlid | Archocentrus centrarchus (4) | GCF_007364275.1_fArcCen1 | 932,930,362 | 188 | 35.59M (13) | 2.15M (129) | 63155 | 2019-08-01 | SAMN09948522 | PRJNA489129 | Vertebrate Genomes Project | fish | |
| flier cichlid | Archocentrus centrarchus (4) | GCA_007364275.1_fArcCen1 | 932,947,025 | 189 | 35.59M (13) | 2.15M (129) | 63155 | 2019-07-24 | Vertebrate Genomes Project | fish | ||||
| arapaima | Arapaima gigas (2) | GCA_007844225.1_ASM784422v1 | 667,351,951 | 60,052 | 285.17K (621) | 64.95K (2,852) | 113544 | 2019-08-08 | SAMN11567704 | PRJNA540910 | University of Wuerzburg | fish | ||
| arapaima | Arapaima gigas (2) | GCA_900497675.1_Agigas_genome_assembly_all_mixed_samples | 661,278,939 | 5,301 | 667.84K (283) | 131.58K (1,352) | 113544 | 2018-07-25 | SAMEA104324749 | PRJEB22808 | UNIVERSIDADE FEDERAL DO PARA | fish | ||
| bony fishes | Kryptolebias hermaphroditus | GCA_007896545.1_ASM789654v1 | 683,986,837 | 5,211 | 27.46M (11) | 46.41K (4,242) | 1747188 | 2019-08-08 | SAMN11869169 | PRJNA545021 | Sungkyunkwan University | fish | ||
| Japanese grenadier anchovy | Coilia nasus | GCA_007927625.1_knifefish_assembly_2.0 | 812,159,898 | 24 | 2.10M (109) | 1.63M (135) | EN | 365059 | 2019-08-16 | SAMN08159314 | PRJNA421870 | BGI | fish | |
| bluehead | Thalassoma bifasciatum | GCA_008086565.1_UOO_Thbifa_1.2 | 1,095,910,316 | 379,332 | 155.82K (1,378) | 122.95K (1,586) | 76338 | 2019-08-02 | SAMN10258813 | PRJNA293777 | University of Otago | fish | ||
| monkeyface prickleback | Cebidichthys violaceus (3) | GCA_008087265.1_Cvio_1.0 | 593,001,491 | 467 | 6.72M (23) | 5.51M (25) | 271503 | 2019-08-26 | SAMN06857690 | PRJNA384078 | University of California, Irvine | fish | ||
| bony fishes | Oreochromis spilurus | GCA_008269305.1_ASM826930v1 | 764,974,731 | 221,829 | 11.85K (16,693) | 64544 | 2019-09-03 | SAMN12169131 | PRJNA551931 | King Abdulaziz University | fish | |||
| pikeperch | Sander lucioperca (6) | GCA_008315115.2_SLUC_FBN_1.2 | 901,221,791 | 336 | 41.06M (10) | 6.66M (39) | 283035 | 2020-08-14 | SAMN12618724 | PRJNA561467 | Leibniz Institute for Farm Animal Biology (FBN) | fish | ||
| view | pikeperch | Sander lucioperca (6) | GCF_008315115.2_SLUC_FBN_1.2 | 901,238,333 | 337 | 41.06M (10) | 6.66M (39) | 283035 | 2020-08-14 | SAMN12618724 | PRJNA561467 | Leibniz Institute for Farm Animal Biology (FBN) | fish | |
| pike-perch | Sander lucioperca (6) | GCA_008315115.1_SLUC_FBN_1 | 900,461,225 | 1,312 | 4.93M (52) | 4.70M (54) | 283035 | 2019-09-06 | Leibniz Institute for Farm Animal Biology (FBN) | fish | ||||
| view | pike-perch | Sander lucioperca (6) | GCF_008315115.1_SLUC_FBN_1 | 900,477,767 | 1,313 | 4.93M (52) | 4.70M (54) | 283035 | 2019-09-06 | Leibniz Institute for Farm Animal Biology (FBN) | fish | |||
| golden perch | Macquaria ambigua | GCA_008360985.1_GOP001_1.1 | 661,429,323 | 7,165 | 252.50K (730) | 243.85K (757) | 135764 | 2019-09-09 | SAMN12340637 | PRJNA556086 | Deakin University | fish | ||
| bony fishes | Triplophysa tibetana | GCA_008369825.1_ASM836982v1 | 652,930,317 | 292 | 24.89M (11) | 2.83M (63) | 1572043 | 2019-09-12 | SAMN11094431 | PRJNA526292 | Gooalgene | fish | ||
| Chinese medaka | Oryzias sinensis | GCA_008586565.1_ASM858656v1 | 813,986,518 | 68,189 | 991.36K (189) | 28.18K (6,644) | 183150 | 2019-09-19 | SAMN12084253 | PRJNA549378 | Peking University | fish | ||
| orangethroat darter | Etheostoma spectabile (2) | GCA_008692095.1_UIUC_Espe_1.0 | 854,790,067 | 3,118 | 30.50M (13) | 26.02K (5,510) | 54343 | 2019-10-07 | SAMN12373147 | PRJNA556880 | University of Illinois at Urbana-Champaign | fish | ||
| view | orangethroat darter | Etheostoma spectabile (2) | GCF_008692095.1_UIUC_Espe_1.0 | 854,806,606 | 3,119 | 30.50M (13) | 26.02K (5,510) | 54343 | 2019-10-07 | SAMN12373147 | PRJNA556880 | University of Illinois at Urbana-Champaign | fish | |
| leopard coralgrouper | Plectropomus leopardus (4) | GCA_008729295.2_YSFRI_Pleo_2.0 | 895,688,574 | 94,259 | 33.29M (13) | 897.07K (278) | 160734 | 2020-05-27 | SAMN11897347 | PRJNA545594 | Yellow Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences | fish | ||
| leopard coralgrouper | Plectropomus leopardus (4) | GCA_011397275.1_Pleo_1.0 | 787,600,493 | 110 | 34.62M (11) | 1.14M (200) | 160734 | 2020-02-20 | SAMD00199277 | PRJDB9154 | Sun Yat-Sen University | fish | ||
| view | leopard coralgrouper | Plectropomus leopardus (4) | GCF_008729295.1_YSFRI_Pleo_2.0 | 895,705,288 | 94,260 | 33.29M (13) | 896.10K (279) | 160734 | 2020-05-27 | SAMN11897347 | PRJNA545594 | Yellow Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences | fish | |
| leopard coralgrouper | Plectropomus leopardus (4) | GCA_008729295.1_YSFRI_Pleo_1.0 | 902,848,175 | 94,259 | 33.47M (13) | 38.00K (5,823) | 160734 | 2019-10-07 | Yellow Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences | fish | ||||
| Mekong tiger perch | Datnioides undecimradiatus | GCA_008933995.1_BGI_Dund_1.0 | 595,034,438 | 4,439 | 9.69M (18) | 3.80M (45) | VU | 1333648 | 2019-10-10 | SAMN12855526 | PRJNA574247 | BGI | fish | |
| red crucian carp | Carassius auratus red var. | GCA_009069565.1_ASM906956v1 | 1,436,409,119 | 262,465 | 516.80K (649) | 34.41K (10,320) | 657186 | 2019-10-15 | SAMN03859971 | PRJNA289059 | Hunan Normal Univesity | fish | ||
| butter catfish | Ompok bimaculatus | GCA_009108245.1_ASM910824v1 | 718,108,919 | 27,041 | 81.58K (2,321) | 81.47K (2,323) | 209166 | 2019-10-15 | SAMN12206647 | PRJNA552450 | DEPARTMENT OF BIOCHEMISTRY, ALL INDIA INSTITUTE OF MEDICAL SCIENCES(AIIMS), NEW DELHI, INDIA | fish | ||
| walleye | Sander vitreus | GCA_009193085.1_ASM919308v1 | 782,907,723 | 305,863 | 4.13K (52,976) | 283036 | 2019-10-21 | SAMN11180528 | PRJNA528354 | Auburn University | fish | |||
| angler | Lophius piscatorius (2) | GCA_009660295.1_BF2_Nord | 747,363,853 | 87,398 | 104.54K (1,980) | 8074 | 2019-11-13 | SAMN11282402 | PRJNA529712 | Nord university | fish | |||
| angler | Lophius piscatorius (2) | GCA_009660315.1_BF1_NORD | 675,616,692 | 148,591 | 6.95K (29,289) | 8074 | 2019-11-13 | SAMN11284904 | PRJNA529712 | Nord university | fish | |||
| eastern mosquitofish | Gambusia holbrooki | GCA_009663075.1_ASM966307v1 | 764,985,754 | 313,140 | 54.64K (3,087) | 42.01K (4,467) | 37273 | 2019-11-14 | SAMN12130783 | PRJNA550492 | University of Wuerzburg | fish | ||
| Myers' icefish | Chionodraco myersi | GCA_009756435.1_Cmyersi_v0.1 | 1,120,102,150 | 63,593 | 48.32K (5,467) | 42.92K (6,150) | 70433 | 2019-12-16 | SAMN10434302 | PRJNA505759 | University of Padova | fish | ||
| Antarctic icefish | Chionodraco hamatus | GCA_009756495.1_Chamatus_v0.1 | 829,466,164 | 94,664 | 51.06K (3,829) | 2.26K (56,481) | 36188 | 2019-12-16 | SAMN10434303 | PRJNA505760 | University of Padova | fish | ||
| view | New Zealand spotty | Notolabrus celidotus (3) | GCA_009762535.1_fNotCel1.pri | 846,760,650 | 468 | 37.09M (11) | 3.75M (64) | 1203425 | 2019-12-18 | SAMN12623201 | PRJNA561956 | Vertebrate Genomes Project | fish | |
| view | New Zealand spotty | Notolabrus celidotus (3) | GCA_009762545.1_fNotCel1.alt | 770,553,912 | 3,286 | 572.53K (370) | 1203425 | 2019-12-17 | SAMN12623201 | PRJNA561957 | Vertebrate Genomes Project | fish | ||
| view | New Zealand spotty | Notolabrus celidotus (3) | GCF_009762535.1_fNotCel1.pri | 846,744,125 | 467 | 37.09M (11) | 3.75M (64) | 1203425 | 2019-12-18 | SAMN12623201 | PRJNA561956 | Vertebrate Genomes Project | fish | |
| view | lumpfish | Cyclopterus lumpus (4) | GCA_009769515.1_fCycLum1.alt | 480,967,379 | 1,866 | 599.28K (212) | 8103 | 2019-12-19 | SAMN12629502 | PRJNA562004 | Vertebrate Genomes Project | fish | ||
| view | lumpfish | Cyclopterus lumpus (4) | GCA_009769545.1_fCycLum1.pri | 572,902,877 | 49 | 23.86M (11) | 4.95M (35) | 8103 | 2019-12-23 | SAMN12629502 | PRJNA562003 | Vertebrate Genomes Project | fish | |
| view | lumpfish | Cyclopterus lumpus (4) | GCF_009769545.1_fCycLum1.pri | 572,885,595 | 48 | 23.86M (11) | 4.95M (35) | 8103 | 2019-12-23 | SAMN12629502 | PRJNA562003 | Vertebrate Genomes Project | fish | |
| view | Atlantic halibut | Hippoglossus hippoglossus (3) | GCA_009819705.1_fHipHip1.pri | 596,792,676 | 57 | 26.31M (11) | 7.02M (23) | EN | 8267 | 2019-12-31 | SAMN12629501 | PRJNA562001 | Vertebrate Genomes Project | fish |
| view | Atlantic halibut | Hippoglossus hippoglossus (3) | GCA_009819745.1_fHipHip1.alt | 676,690,381 | 4,053 | 827.00K (222) | 827.00K (222) | EN | 8267 | 2019-12-27 | SAMN12629501 | PRJNA562002 | G10K | fish |
| view | Atlantic halibut | Hippoglossus hippoglossus (3) | GCF_009819705.1_fHipHip1.pri | 596,792,615 | 57 | 26.31M (11) | 7.02M (23) | EN | 8267 | 2019-12-31 | SAMN12629501 | PRJNA562001 | Vertebrate Genomes Project | fish |
| bony fishes | Thamnaconus septentrionalis | GCA_009823395.1_ASM982339v1 | 474,309,635 | 155 | 23.05M (9) | 22.46M (10) | 435163 | 2020-01-02 | SAMN12753623 | PRJNA565600 | Yellow Sea Fisheries Research Institute | fish | ||
| topmouth culter | Culter alburnus | GCA_009869775.1_ASM986977v1 | 1,017,706,352 | 5,625 | 3.67M (76) | 121.42K (2,280) | 194366 | 2020-01-14 | SAMN10457884 | PRJNA269572 | Hunan Normal Univesity | fish | ||
| Wuchang bream | Megalobrama amblycephala (3) | GCA_009869865.1_ASM986986v1 | 1,087,899,576 | 18,243 | 1.40M (206) | 322.87K (882) | 75352 | 2020-01-14 | SAMN10457791 | PRJNA269572 | Hunan Normal Univesity | fish | ||
| Wuchang bream | Megalobrama amblycephala (3) | GCA_018812025.1_ASM1881202v1 | 1,109,871,993 | 242 | 42.27M (11) | 2.58M (109) | 75352 | 2021-06-09 | SAMN18522313 | PRJNA343584 | Huazhong Agricultural University | fish | ||
| view | Wuchang bream | Megalobrama amblycephala (3) | GCF_018812025.1_ASM1881202v1 | 1,109,888,616 | 243 | 42.27M (11) | n/a | n/a | n/a | fish | ||||
| bony fishes | Gymnarchus niloticus | GCA_009936485.1_ASM993648v1 | 653,962,364 | 54,167 | 1.18M (16) | 54.27K (2,661) | 42648 | 2020-01-27 | SAMN08214438 | PRJNA423259 | IRIDIAN GENOMES | fish | ||
| dusky pipefish | Syngnathus floridae | GCA_010014945.1_ASM1001494v1 | 367,727,558 | 138,891 | 1.38M (12) | 11.03K (6,076) | 161585 | 2020-01-30 | SAMN09688109 | PRJNA481557 | IRIDIAN GENOMES | fish | ||
| yellow croaker | Larimichthys polyactis (2) | GCA_010119295.1_ASM1011929v1 | 694,446,753 | 107,847 | 146.74K (1,192) | 8.08K (21,367) | 334908 | 2020-02-03 | SAMN13220413 | PRJNA587872 | Zhejiang Ocean University | fish | ||
| yellow croaker | Larimichthys polyactis (2) | GCA_018985215.1_ZAAS_Lpoly_1.0 | 706,148,513 | 715 | 4.52M (45) | 1.21M (152) | 334908 | 2021-06-21 | SAMN18104312 | PRJNA705840 | Zhejiang Academy of Agricultural Sciences | fish | ||
| bony fishes | Poeciliopsis turrubarensis | GCA_010277015.1_ASM1027701v1 | 596,996,646 | 5,396 | 4.23M (35) | 101.02K (1,604) | 188136 | 2020-02-06 | SAMN12288626 | PRJNA555006 | Wageningen UR | fish | ||
| bony fishes | Poeciliopsis retropinna | GCA_010277075.1_ASM1027707v1 | 621,858,691 | 78 | 21.60M (13) | 15.06M (15) | VU | 188133 | 2020-02-06 | SAMN12288624 | PRJNA555005 | Wageningen UR | fish | |
| bony fishes | Protosalanx chinensis | GCA_010882115.1_ASM1088211v1 | 466,693,640 | 1,775 | 5.19M (23) | 103.01K (876) | 240822 | 2020-02-20 | SAMN14001151 | PRJNA604876 | Institute of Zoology Chinese Academy of Sciences | fish | ||
| Gila topminnow | Poeciliopsis occidentalis | GCA_010883035.1_ASM1088303v1 | 724,239,826 | 15,101 | 1.54M (103) | 56.89K (3,255) | 68464 | 2020-02-20 | SAMN11418710 | PRJNA532900 | Texas A&M University | fish | ||
| brown-marbled grouper | Epinephelus fuscoguttatus | GCA_011397635.1_E.fuscoguttatus.final_Chr_v1 | 1,046,995,804 | 25 | 44.42M (11) | 13.86M (23) | VU | 293821 | 2020-02-20 | SAMD00201013 | PRJDB9224 | Epinephelus fuscoguttatus | fish | |
| bighead catfish | Clarias macrocephalus | GCA_011419295.1_DU_Cmac_1.0 | 883,399,353 | 27,833 | 80.80K (3,062) | 47.84K (5,208) | 35657 | 2020-03-18 | SAMN13972449 | PRJNA604477 | Deakin University | fish | ||
| bluebanded goby | Lythrypnus dalli | GCA_011763505.1_ASM1176350v1 | 830,691,505 | 570,462 | 2.58M (9) | 8.11K (6,892) | 314003 | 2020-03-27 | SAMN06220456 | PRJNA361115 | IRIDIAN GENOMES | fish | ||
| bony fishes | Mormyrus iriodes | GCA_011763525.1_ASM1176352v1 | 756,950,169 | 87,778 | 38.65K (2,062) | 31.07K (5,278) | VU | 2303995 | 2020-03-27 | SAMN11649522 | PRJNA542943 | IRIDIAN GENOMES | fish | |
| Antarctic toothfish | Dissostichus mawsoni | GCA_011823955.1_KU_Dm_1.0 | 926,363,279 | 1,074 | 36.98M (12) | 3.02M (69) | 36200 | 2020-04-01 | SAMN12869232 | PRJNA574770 | Korea University | fish | ||
| big-eye mandarin fish | Siniperca knerii (3) | GCA_011952075.1_sinKne6b | 723,564,461 | 1,844 | 29.78M (12) | 77.51K (2,678) | 214812 | 2020-04-09 | SAMN13269088 | PRJNA513951 | IGB Leibniz-Institute of Freshwater Ecology and Inland Fisheries | fish | ||
| big-eye mandarin fish | Siniperca knerii (3) | GCA_016617885.1_ASM1661788v1 | 732,114,433 | 7,989 | 12.86M (19) | 58.31K (3,465) | 214812 | 2021-01-12 | SAMN12990280 | PRJNA576324 | Shanghai Ocean University | fish | ||
| big-eye mandarin fish | Siniperca knerii (3) | GCA_019425535.1_ASM1942553v1 | 732,114,433 | 7,989 | 12.86M (19) | 58.31K (3,465) | 214812 | 2021-07-30 | SAMN12911371 | PRJNA575794 | Shanghai Ocean University | fish | ||
| mandarin fish | Siniperca chuatsi (3) | GCA_011952085.1_sinChu7 | 755,045,244 | 1,155 | 30.51M (12) | 12.19M (21) | 119488 | 2020-04-09 | SAMN13269087 | PRJNA513951 | IGB Leibniz-Institute of Freshwater Ecology and Inland Fisheries | fish | ||
| mandarin fish | Siniperca chuatsi (3) | GCA_020085105.1_ASM2008510v1 | 718,804,017 | 64 | 30.01M (11) | 20.48M (14) | 119488 | 2021-09-24 | SAMN19768590 | PRJNA738969 | Chinese Academy of Sciences | fish | ||
| view | mandarin fish | Siniperca chuatsi (3) | GCF_020085105.1_ASM2008510v1 | 718,820,513 | 65 | 30.01M (11) | 20.48M (14) | 119488 | 2021-09-24 | SAMN19768590 | PRJNA738969 | Chinese Academy of Sciences | fish | |
| leopard mandarin fish | Siniperca scherzeri | GCA_011952095.1_sinSch6b | 736,162,835 | 2,817 | 30.17M (11) | 83.75K (2,459) | 228252 | 2020-04-09 | SAMN13269089 | PRJNA513951 | IGB Leibniz-Institute of Freshwater Ecology and Inland Fisheries | fish | ||
| bony fishes | Coreoperca whiteheadi | GCA_011952105.1_corWhi6b | 712,451,466 | 2,611 | 28.60M (12) | 76.59K (2,491) | 228250 | 2020-04-09 | SAMN13269090 | PRJNA513951 | IGB Leibniz-Institute of Freshwater Ecology and Inland Fisheries | fish | ||
| tambaqui | Colossoma macropomum (3) | GCA_012026605.1_UP_Cma | 2,314,107,020 | 229,835 | 25.04K (24,386) | 18.01K (35,010) | 42526 | 2020-04-03 | SAMN13634674 | PRJNA596735 | CIIMAR - Interdisciplinary Centre of Marine and Environmental Research | fish | ||
| tambaqui | Colossoma macropomum (3) | GCA_904425465.1_Colossoma_macropomum | 1,221,847,006 | 1,269 | 40.16M (14) | 5.65M (54) | 42526 | 2020-09-25 | SAMEA7302664 | PRJEB40318 | WELLCOME TRUST SANGER INSTITUTE | fish | ||
| view | tambaqui | Colossoma macropomum (3) | GCF_904425465.1_Colossoma_macropomum | 1,221,847,006 | 1,269 | 40.16M (14) | 5.65M (54) | 42526 | 2020-09-25 | SAMEA7302664 | PRJEB40318 | WELLCOME TRUST SANGER INSTITUTE | fish | |
| spotted halibut | Verasper variegatus (2) | GCA_012393435.1_ASM1239343v1 | 556,789,779 | 6,252 | 23.83M (11) | 175.15K (863) | VU | 82366 | 2020-04-16 | SAMN13738317 | PRJNA599060 | BGI-Qingdao | fish | |
| spotted halibut | Verasper variegatus (2) | GCA_013332515.1_ysfri_vvar_1.0 | 545,339,360 | 57 | 24.76M (11) | 14.45M (15) | VU | 82366 | 2020-06-11 | SAMN14998119 | PRJNA634516 | Yellow Sea fisheries Research Institution | fish | |
| black bullhead | Ameiurus melas | GCA_012411365.1_AMELA_1.0 | 868,496,679 | 199 | 32.28M (12) | 7.41M (36) | 219545 | 2020-04-16 | SAMN13926790 | PRJNA603265 | GenoFish | fish | ||
| bony fishes | Onychostoma macrolepis | GCA_012432095.1_ASM1243209v1 | 886,569,841 | 352 | 34.07M (11) | 10.81M (24) | 369639 | 2020-04-17 | SAMN14163390 | PRJNA608076 | SOUTHWEST UNIVERSITY | fish | ||
| deepwater notothen | Trematomus loennbergii (2) | GCA_012861695.1_KUTl01 | 1,210,523,816 | 3,569 | 15.53M (22) | 968.53K (232) | 40692 | 2020-04-27 | SAMN14309518 | PRJNA610666 | EarthBIogenome Project | fish | ||
| chum salmon | Oncorhynchus keta (3) | GCA_012931545.1_Oket_V1 | 1,853,087,674 | 25,264 | 656.20K (617) | 50.31K (8,348) | 8018 | 2020-04-29 | SAMN12367893 | PRJNA556729 | Fisheries and Oceans Canada | fish | ||
| view | chum salmon | Oncorhynchus keta (3) | GCF_012931545.1_Oket_V1 | 1,853,104,330 | 25,265 | 656.20K (617) | 50.31K (8,348) | 8018 | 2020-04-29 | SAMN12367893 | PRJNA556729 | Fisheries and Oceans Canada | fish | |
| catla | Labeo catla (2) | GCA_012976165.1_CIFA_Catla_1.0 | 1,019,782,285 | 5,345 | 719.17K (353) | 719.17K (353) | 72446 | 2020-05-05 | SAMN12390082 | PRJNA557138 | ICAR-Central Institute of Freshwater Aquaculture | fish | ||
| catla | Labeo catla (2) | GCA_014525385.1_HRRL_MCC_1.0 | 1,232,079,142 | 5,344 | 723.74K (412) | 4.55K (62,788) | 72446 | 2020-09-11 | SAMN14544131 | PRJNA623322 | Chattogram Veterinary and Animal Sciences University | fish | ||
| Arkansas darter | Etheostoma cragini (2) | GCA_013103735.1_CSU_Ecrag_1.0 | 643,094,656 | 4,666 | 27.59M (11) | 45.09K (3,912) | 417921 | 2020-05-15 | SAMN14351042 | PRJNA611833 | Kellogg Biological Station, Michigan State University | fish | ||
| view | Arkansas darter | Etheostoma cragini (2) | GCF_013103735.1_CSU_Ecrag_1.0 | 643,078,674 | 4,664 | 27.59M (11) | 45.09K (3,912) | 417921 | 2020-05-15 | SAMN14351042 | PRJNA611833 | Kellogg Biological Station, Michigan State University | fish | |
| humpback grouper | Cromileptes altivelis (2) | GCA_013133815.1_SYSU_Calt_1.1 | 1,013,370,389 | 164 | 43.47M (11) | 18.27M (18) | 304459 | 2020-05-21 | SAMN14537433 | PRJNA623050 | Sun Yat-sen University | fish | ||
| humpback grouper | Cromileptes altivelis (2) | GCA_019925165.1_OUC_Cal_1.0 | 1,083,008,411 | 306 | 43.78M (12) | 5.16M (62) | 304459 | 2021-09-14 | SAMN18593460 | PRJNA719261 | Ocean University of China | fish | ||
| Pacific halibut | Hippoglossus stenolepis (5) | GCA_013339905.1_IPHC_HiSten_1.0 | 594,127,359 | 119 | 24.99M (11) | 17.83M (14) | 195615 | 2020-06-16 | SAMN14503176 | PRJNA622249 | International Pacific Halibut Commission | fish | ||
| view | Pacific halibut (QCI-W04-F060 2022) | Hippoglossus stenolepis (5) | GCF_022539355.2_HSTE1.2 | 602,165,188 | 53 | 27.29M (11) | n/a | n/a | n/a | fish | ||||
| warty frogfish | Antennarius maculatus (2) | GCA_013347815.1_fAntMac1.alt | 530,348,589 | 2,294 | 380.06K (370) | 882753 | 2020-06-12 | SAMN12623626 | PRJNA561980 | Vertebrate Genomes Project | fish | |||
| warty frogfish | Antennarius maculatus (2) | GCA_013358685.1_fAntMac1.pri | 549,949,511 | 155 | 22.93M (11) | 10.11M (17) | 882753 | 2020-06-18 | SAMN12623626 | PRJNA561983 | Vertebrate Genomes Project | fish | ||
| inland silverside | Menidia beryllina | GCA_013363375.1_ASM1336337v1 | 564,723,020 | 51,035 | 4.49M (26) | 40.09K (3,300) | 269057 | 2020-06-19 | SAMN14992539 | PRJNA634345 | University of California Davis | fish | ||
| logperch | Percina caprodes | GCA_013375575.1_MU_Pcap_1.0 | 1,011,959,657 | 3,656 | 1.43M (155) | 1.43M (155) | 54317 | 2020-06-29 | SAMN15198648 | PRJNA638626 | McGill University | fish | ||
| yellowfin seabream | Acanthopagrus latus (5) | GCA_013436515.1_ASM1343651v1 | 806,072,371 | 4,265 | 30.69M (12) | 1.17M (187) | 8177 | 2020-07-23 | SAMN12777031 | PRJNA566022 | South China Sea Fisheries Research Institute | fish | ||
| yellowfin seabream | Acanthopagrus latus (5) | GCA_020080195.1_ASM2008019v1 | 733,109,041 | 288 | 29.92M (12) | 13.48M (19) | 8177 | 2021-09-24 | SAMN15589959 | PRJNA647536 | Sun Yat-sen University | fish | ||
| yellowfin seabream | Acanthopagrus latus (5) | GCA_904848175.1_fAcaLat1.1_alternate_haplotype | 47,986,553 | 349 | 208.24K (65) | 195.68K (69) | 8177 | 2020-10-12 | SAMN16236878 | PRJEB40701 | SC | fish | ||
| yellowfin seabream | Acanthopagrus latus (5) | GCA_904848185.1_fAcaLat1.1 | 685,127,588 | 65 | 30.72M (11) | 14.88M (18) | 8177 | 2020-10-12 | SAMN16236878 | PRJEB40700 | SC | fish | ||
| view | yellowfin seabream | Acanthopagrus latus (5) | GCF_904848185.1_fAcaLat1.1 | 685,144,197 | 66 | 30.72M (11) | 14.88M (18) | 8177 | 2020-10-12 | SAMN16236878 | PRJEB40700 | SC | fish | |
| Kuria labeo | Labeo gonius | GCA_013461565.1_ASM1346156v1 | 738,294,552 | 273,565 | 3.58K (59,782) | 2.20K (100,354) | 295400 | 2020-07-22 | SAMN07156107 | PRJNA387501 | ICAR-Central Inland Fisheries Research Institute | fish | ||
| bony fishes | Clarias magur | GCA_013621035.1_C_magur1.0 | 941,297,321 | 3,484 | 1.32M (185) | 1.23M (198) | EN | 1594786 | 2020-07-24 | SAMN08826798 | PRJNA448280 | Rohu and Magur Genome Sequencing Consortium | fish | |
| bony fishes | Gasterosteus nipponicus (2) | GCA_014132575.2_Gnip_1.0 | 599,537,287 | 3,095 | 17.64M (12) | 544.63K (230) | 1778380 | 2020-07-29 | SAMD00226355 | PRJDB9841 | the University of Tokyo | fish | ||
| bony fishes | Gasterosteus nipponicus (2) | GCA_014132575.1_Gnip_1.0 | 599,537,287 | 3,095 | 17.64M (12) | 544.63K (230) | 1778380 | 2020-07-29 | the University of Tokyo | fish | ||||
| red drum | Sciaenops ocellatus | GCA_014183145.1_ASM1418314v1 | 684,633,790 | 34,462 | 25.66M (12) | 151.93K (1,208) | 76340 | 2020-08-14 | SAMN13064845 | PRJNA578506 | Shanghai Ocean University | fish | ||
| white flower croaker | Nibea albiflora (4) | GCA_014281875.1_ASM1428187v1 | 627,578,634 | 524 | 25.43M (12) | 4.42M (39) | 240163 | 2020-08-25 | SAMN13037310 | PRJNA577200 | Marine Fishery Institute of Zhejiang Province | fish | ||
| white flower croaker | Nibea albiflora (4) | GCA_900327885.1_Nibea_albiflora_v1.0 | 574,466,150 | 11,977 | 2.15M (66) | 55.15K (2,373) | 240163 | 2018-12-05 | SAMEA1067819 | PRJEB24302 | JIMEI UNIVERSITY | fish | ||
| white flower croaker | Nibea albiflora (4) | GCA_900659735.1_Pseudomonas_aeruginosa | 6,624,003 | 3 | 2.48M (2) | 240163 | 2019-02-05 | SAMEA1067819 | PRJEB30768 | JIMEI UNIVERSITY | fish | |||
| white flower croaker | Nibea albiflora (4) | GCA_902410095.1_YD_2 | 595,676,849 | 845 | 25.20M (11) | 535.45K (325) | 240163 | 2021-01-28 | SAMEA5857982 | PRJEB33909 | JIMEI UNIVERSITY | fish | ||
| Indian salmon | Eleutheronema tetradactylum | GCA_014490765.1_CUHK_ma_10x | 610,497,648 | 36,746 | 56.31K (2,806) | 30.81K (5,460) | 210139 | 2020-09-08 | SAMN13011971 | PRJNA576868 | The Chinese University of Hong Kong | fish | ||
| Celebes medaka | Oryzias celebensis | GCA_014656515.1_OryCel_1.0 | 688,104,639 | 594 | 28.93M (7) | 6.11M (30) | 126373 | 2020-09-12 | SAMD00239084 | PRJDB10371 | National Institute of Genetics | fish | ||
| European catfish | Silurus glanis | GCA_014706435.1_S_gla_Hod_UTU_1.0 | 793,358,859 | 25,703 | 3.17M (65) | 13.87K (14,585) | 94993 | 2020-10-02 | SAMN14055911 | PRJNA605930 | University of Turku | fish | ||
| toothed Cuban cusk-eel | Lucifuga dentata | GCA_014773175.1_Ldentata1.0 | 630,651,555 | 21,240 | 120.92K (1,365) | 62.30K (2,759) | EN | 670423 | 2020-09-28 | SAMN12634698 | PRJNA562121 | EGCE - CNRS Gif-sur-Yvette | fish | |
| bony fishes | Silurus meridionalis (2) | GCA_014805685.1_ASM1480568v1 | 742,579,920 | 285 | 28.05M (12) | 13.20M (20) | 175797 | 2020-10-02 | SAMN14558653 | PRJNA623722 | Southwest University | fish | ||
| view | Chinese large-mouth catfish (SWU-2019-XX 2020) | Silurus meridionalis (2) | GCF_014805685.1_ASM1480568v1 | 742,596,447 | 286 | 28.05M (12) | n/a | n/a | SAMN14558653 | PRJNA623722 | n/a | fish | ||
| pejerrey | Odontesthes bonariensis | GCA_014825785.1_GWU_Obon_1.1 | 870,329,685 | 31,268 | 60.95K (3,802) | 14.34K (11,351) | 219752 | 2020-09-30 | SAMN09607192 | PRJNA327688 | George Washington University | fish | ||
| freshwater garfish | Xenentodon cancila (2) | GCA_014839645.1_fXenCan1.alt | 658,557,970 | 5,169 | 211.43K (882) | 211.43K (882) | 129108 | 2020-09-30 | SAMN12623622 | PRJNA561974 | Vertebrate Genomes Project | fish | ||
| freshwater garfish | Xenentodon cancila (2) | GCA_014839995.1_fXenCan1.pri | 736,214,936 | 410 | 28.68M (12) | 2.20M (83) | 129108 | 2020-10-02 | SAMN12623622 | PRJNA561973 | Vertebrate Genomes Project | fish | ||
| largescale foureyes | Anableps anableps (2) | GCA_014839685.1_fAnaAna1.pri | 867,632,993 | 33 | 39.32M (11) | 17.46M (17) | 195821 | 2020-10-02 | SAMN12623628 | PRJNA561985 | Vertebrate Genomes Project | fish | ||
| largescale foureyes | Anableps anableps (2) | GCA_014839705.1_fAnaAna1.alt | 445,542,990 | 5,088 | 112.13K (1,189) | 195821 | 2020-09-30 | SAMN12623628 | PRJNA561986 | Vertebrate Genomes Project | fish | |||
| largemouth bass | Micropterus salmoides (4) | GCA_014851395.1_ASM1485139v1 | 963,597,430 | 4,752 | 36.48M (12) | 1.23M (202) | 27706 | 2020-10-05 | SAMN15299117 | PRJNA640112 | Biozeron Shenzhen Inc. | fish | ||
| largemouth bass | Micropterus salmoides (4) | GCA_019677235.1_HNU_Msal_1.0 | 877,669,248 | 202 | 37.18M (11) | 5.97M (38) | 27706 | 2021-08-18 | SAMN15783178 | PRJNA656383 | Henan Normal University, Pearl River Fisheries Research Institute, CAFS | fish | ||
| view | largemouth bass | Micropterus salmoides (4) | GCF_014851395.1_ASM1485139v1 | 963,613,914 | 4,753 | 36.48M (12) | 1.23M (202) | 27706 | 2020-10-05 | SAMN15299117 | PRJNA640112 | Biozeron Shenzhen Inc. | fish | |
| Rio pearlfish | Nematolebias whitei (4) | GCA_014905685.2_NemWhi1 | 1,218,332,341 | 18,999 | 49.98M (11) | 19.98K (15,689) | 451745 | 2021-03-24 | SAMN12588121 | PRJNA560526 | Michigan State University | fish | ||
| view | Rio pearlfish | Nematolebias whitei (4) | GCF_014905685.2_NemWhi1 | 1,218,316,901 | 18,998 | 49.98M (11) | 19.98K (15,689) | 451745 | 2021-03-24 | SAMN12588121 | PRJNA560526 | Michigan State University | fish | |
| Rio pearlfish | Nematolebias whitei (4) | GCA_014905685.1_NemWhi1 | 1,218,332,341 | 18,999 | 49.98M (11) | 19.98K (15,689) | 451745 | 2020-10-22 | Michigan State University | fish | ||||
| view | Rio pearlfish | Nematolebias whitei (4) | GCF_014905685.1_NemWhi1 | 1,218,316,901 | 18,998 | 49.98M (11) | 19.98K (15,689) | 451745 | 2020-10-22 | Michigan State University | fish | |||
| bony fishes | Oreochromis tanganicae (2) | GCA_015052225.1_JAB6.scf | 743,038,855 | 54,461 | 29.95K (6,503) | 13.69K (14,900) | 8142 | 2020-10-28 | SAMN12123811 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Oreochromis tanganicae (2) | GCA_015107795.1_JAC7.scf | 738,938,093 | 54,666 | 29.70K (6,593) | 13.55K (15,091) | 8142 | 2020-10-29 | SAMN12123813 | PRJNA550295 | "CICHLID~X" | fish | ||
| blunthead cichlid | Tropheus moorii (3) | GCA_015052245.1_JBH5.scf | 671,742,922 | 66,416 | 17.04K (11,103) | 5.75K (35,581) | 8150 | 2020-10-28 | SAMN12123831 | PRJNA550295 | "CICHLID~X" | fish | ||
| blunthead cichlid | Tropheus moorii (3) | GCA_015107615.1_JBH4.scf | 671,084,953 | 70,567 | 15.49K (12,166) | 7.42K (26,997) | 8150 | 2020-10-29 | SAMN12123830 | PRJNA550295 | "CICHLID~X" | fish | ||
| blunthead cichlid | Tropheus moorii (3) | GCA_902810505.1_TMv1.0 | 911,126,605 | 7,662 | 1.64M (165) | 32.18K (7,742) | 8150 | 2020-04-15 | SAMEA6604290 | PRJEB37068 | UNIVERSITY OF GRAZ | fish | ||
| bony fishes | Cyprichromis pavo (2) | GCA_015052265.1_JEB2.scf | 684,650,755 | 61,225 | 18.96K (10,150) | 7.61K (26,746) | 309881 | 2020-10-28 | SAMN12123846 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Cyprichromis pavo (2) | GCA_015107255.1_JEB4.scf | 675,130,045 | 72,768 | 14.68K (13,084) | 7.49K (27,020) | 309881 | 2020-10-29 | SAMN12123847 | PRJNA550295 | "CICHLID~X" | fish | ||
| threadfin cichlid | Petrochromis trewavasae (3) | GCA_015052285.1_IWC9.scf | 709,996,764 | 53,558 | 24.57K (7,912) | 11.87K (17,249) | 244518 | 2020-10-28 | SAMN12123772 | PRJNA550295 | "CICHLID~X" | fish | ||
| threadfin cichlid | Petrochromis trewavasae (3) | GCA_015106415.1_IWD4.scf | 687,763,470 | 60,747 | 19.75K (9,730) | 7.11K (29,234) | 244518 | 2020-10-29 | SAMN12123773 | PRJNA550295 | "CICHLID~X" | fish | ||
| threadfin cichlid | Petrochromis trewavasae (3) | GCA_902810495.1_PTv1.0 | 917,573,940 | 7,261 | 1.83M (156) | 46.76K (5,270) | 244518 | 2020-04-15 | SAMEA6604288 | PRJEB37068 | UNIVERSITY OF GRAZ | fish | ||
| bony fishes | Hemibates koningsi (2) | GCA_015052305.1_IZA5.scf | 725,816,905 | 61,069 | 19.55K (10,356) | 10.03K (21,503) | 2126561 | 2020-10-28 | SAMN12123797 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Hemibates koningsi (2) | GCA_015113035.1_LJC5.scf | 569,184,832 | 190,460 | 3.53K (50,907) | 2.96K (62,175) | 2126561 | 2020-10-29 | SAMN12124115 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Gnathochromis permaxillaris (2) | GCA_015052325.1_IUI5.scf | 692,581,368 | 63,710 | 18.70K (10,435) | 7.17K (29,007) | 143505 | 2020-10-28 | SAMN12123759 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Gnathochromis permaxillaris (2) | GCA_015104535.1_ITA4.scf | 700,749,853 | 59,230 | 20.91K (9,340) | 8.43K (24,754) | 143505 | 2020-10-29 | SAMN12123742 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus prochilus (2) | GCA_015052335.1_IVH2.scf | 670,826,502 | 77,817 | 14.67K (12,291) | 5.31K (37,994) | 449324 | 2020-10-28 | SAMN12123769 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus prochilus (2) | GCA_015106535.1_IVH1.scf | 682,293,555 | 73,984 | 16.23K (11,033) | 6.19K (32,346) | 449324 | 2020-10-29 | SAMN12123768 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Lamprologus callipterus (2) | GCA_015052345.1_IPH2.scf | 705,074,517 | 65,861 | 19.27K (9,537) | 9.41K (21,242) | 32501 | 2020-10-28 | SAMN12123702 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Lamprologus callipterus (2) | GCA_015107835.1_JAB1.scf | 669,404,384 | 77,658 | 14.23K (12,766) | 5.49K (37,024) | 32501 | 2020-10-29 | SAMN12123810 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Limnochromis abeelei (2) | GCA_015052385.1_ITB4.scf | 694,208,540 | 59,113 | 20.64K (9,273) | 9.17K (22,396) | 286579 | 2020-10-28 | SAMN12123746 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Limnochromis abeelei (2) | GCA_015104495.1_ITB3.scf | 689,411,359 | 60,312 | 20.29K (9,467) | 7.11K (28,770) | 286579 | 2020-10-29 | SAMN12123745 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Altolamprologus calvus (2) | GCA_015052405.1_IOE3.scf | 703,299,116 | 71,712 | 16.86K (11,065) | 8.23K (24,633) | 34792 | 2020-10-28 | SAMN12123691 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Altolamprologus calvus (2) | GCA_015105555.1_IOE2.scf | 679,688,995 | 74,994 | 15.97K (11,138) | 6.60K (29,325) | 34792 | 2020-10-29 | SAMN12123690 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Pseudosimochromis curvifrons (2) | GCA_015052425.1_AYC7.scf | 705,940,351 | 66,352 | 18.11K (10,805) | 10.15K (20,195) | 167848 | 2020-10-28 | SAMN12123616 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Pseudosimochromis curvifrons (2) | GCA_015103735.1_AXF8.scf | 698,702,596 | 72,002 | 16.04K (12,172) | 8.48K (24,247) | 167848 | 2020-10-29 | SAMN12123613 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Cyprichromis zonatus (2) | GCA_015052445.1_GPC9.scf | 696,218,319 | 53,621 | 23.05K (8,343) | 10.18K (19,952) | 309894 | 2020-10-28 | SAMN12123638 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Cyprichromis zonatus (2) | GCA_015103195.1_GPD1.scf | 673,900,190 | 64,357 | 17.51K (10,783) | 7.13K (28,471) | 309894 | 2020-10-29 | SAMN12123639 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Xenotilapia sp. 'papilio sunflower' (2) | GCA_015052465.1_GPF8.scf | 665,658,366 | 86,135 | 12.22K (15,034) | 5.01K (40,203) | 240487 | 2020-10-28 | SAMN12123640 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Xenotilapia sp. 'papilio sunflower' (2) | GCA_015103175.1_GPF9.scf | 690,032,972 | 79,436 | 14.23K (13,142) | 6.72K (30,289) | 240487 | 2020-10-29 | SAMN12123641 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Lamprologus ocellatus (2) | GCA_015052485.1_ILD3.scf | 683,075,113 | 78,701 | 14.05K (13,256) | 6.09K (33,680) | 195090 | 2020-10-28 | SAMN12123656 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Lamprologus ocellatus (2) | GCA_015102935.1_ILC1.scf | 677,293,717 | 81,326 | 13.29K (13,685) | 7.33K (26,985) | 195090 | 2020-10-29 | SAMN12123655 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Gnathochromis pfefferi (2) | GCA_015052505.1_AWB7.scf | 684,035,700 | 58,754 | 20.61K (9,193) | 7.50K (27,368) | 32498 | 2020-10-28 | SAMN12123602 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Gnathochromis pfefferi (2) | GCA_015103855.1_AWE2.scf | 680,179,288 | 58,674 | 20.58K (9,103) | 7.08K (28,677) | 32498 | 2020-10-29 | SAMN12123605 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Petrochromis sp. 'orthognathus ikola' AB-2019 (2) | GCA_015052525.1_LFA8.scf | 681,483,515 | 62,676 | 19.14K (9,924) | 6.62K (30,894) | 2591298 | 2020-10-28 | SAMN12124070 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Petrochromis sp. 'orthognathus ikola' AB-2019 (2) | GCA_015110955.1_LFA6.scf | 677,221,155 | 62,933 | 18.91K (10,006) | 6.01K (34,137) | 2591298 | 2020-10-29 | SAMN12124069 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus devosi | GCA_015052545.1_LEH2.scf | 710,808,205 | 66,828 | 18.68K (9,825) | 9.80K (20,758) | VU | 452213 | 2020-10-28 | SAMN12124066 | PRJNA550295 | "CICHLID~X" | fish | |
| bony fishes | Pseudosimochromis marginatus (4) | GCA_015052565.1_KCE7.scf | 706,278,120 | 52,804 | 24.86K (7,830) | 11.71K (17,404) | 46578 | 2020-10-28 | SAMN12123978 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Pseudosimochromis marginatus (4) | GCA_015109255.1_KFF1.scf | 685,439,317 | 58,821 | 20.74K (9,099) | 7.31K (27,831) | 46578 | 2020-10-29 | SAMN12124003 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Pseudosimochromis marginatus (4) | GCA_015109285.1_KFE8.scf | 675,660,616 | 61,769 | 18.90K (9,956) | 6.16K (33,269) | 46578 | 2020-10-29 | SAMN12124002 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Pseudosimochromis marginatus (4) | GCA_015109615.1_KCF3.scf | 707,394,168 | 54,367 | 23.65K (8,208) | 12.19K (16,697) | 46578 | 2020-10-29 | SAMN12123979 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Simochromis diagramma (4) | GCA_015052585.1_AUD8.scf | 706,606,566 | 58,596 | 22.13K (8,748) | 11.21K (18,057) | 43689 | 2020-10-28 | SAMN12123590 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Simochromis diagramma (4) | GCA_015102155.1_AUE1.scf | 702,248,343 | 58,607 | 21.97K (8,796) | 10.33K (19,634) | 43689 | 2020-10-29 | SAMN12123591 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Simochromis diagramma (4) | GCA_900408965.1_fSimDia1.1 | 848,827,444 | 823 | 8.96M (25) | 2.23M (108) | 43689 | 2018-06-18 | SAMEA104026415 | PRJEB26682 | SC | fish | ||
| view | bony fishes | Simochromis diagramma (4) | GCF_900408965.1_fSimDia1.1 | 848,827,444 | 823 | 8.96M (25) | 2.23M (108) | 43689 | 2018-06-18 | SAMEA104026415 | PRJEB26682 | SC | fish | |
| bony fishes | Tropheus sp. 'lunatus' AB-2019 (2) | GCA_015052595.1_KED7.scf | 688,421,799 | 68,509 | 17.38K (11,014) | 7.23K (28,069) | 2591309 | 2020-10-28 | SAMN12123992 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Tropheus sp. 'lunatus' AB-2019 (2) | GCA_015109455.1_KED6.scf | 677,263,118 | 62,265 | 19.08K (9,945) | 6.01K (34,036) | 2591309 | 2020-10-29 | SAMN12123991 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus pleuromaculatus (2) | GCA_015052625.1_JZF1.scf | 693,565,144 | 73,115 | 16.25K (11,413) | 6.99K (29,438) | 2591257 | 2020-10-28 | SAMN12123962 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus pleuromaculatus (2) | GCA_015109975.1_JZF2.scf | 710,437,232 | 66,532 | 18.98K (9,752) | 9.60K (21,060) | 2591257 | 2020-10-29 | SAMN12123963 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Benitochromis conjunctus | GCA_015052645.1_JWE4.scf | 665,781,484 | 44,281 | 27.76K (6,920) | 6.90K (29,438) | EN | 1514669 | 2020-10-28 | SAMN12123899 | PRJNA550295 | "CICHLID~X" | fish | |
| bony fishes | Apistogramma diplotaenia | GCA_015052665.1_JWD9.scf | 627,074,439 | 48,219 | 25.16K (6,880) | 7.78K (24,046) | 2591248 | 2020-10-28 | SAMN12123895 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Julidochromis sp. 'unterfels' AB-2019 (2) | GCA_015052685.1_JWA2.scf | 718,430,107 | 65,284 | 20.30K (9,018) | 11.44K (17,364) | 2591276 | 2020-10-28 | SAMN12123878 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Julidochromis sp. 'unterfels' AB-2019 (2) | GCA_015108815.1_JWA1.scf | 711,880,470 | 68,511 | 18.76K (9,751) | 10.34K (19,279) | 2591276 | 2020-10-29 | SAMN12123877 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Tropheus sp. 'black' (2) | GCA_015052705.1_JVC3.scf | 712,498,882 | 54,208 | 24.30K (8,032) | 12.40K (16,581) | 1818577 | 2020-10-28 | SAMN12123868 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Tropheus sp. 'black' (2) | GCA_015106955.1_JVC9.scf | 694,724,529 | 58,912 | 21.11K (9,096) | 8.48K (24,231) | 1818577 | 2020-10-29 | SAMN12123869 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Spathodus erythrodon (2) | GCA_015052725.1_JUB7.scf | 694,763,626 | 63,381 | 18.22K (10,730) | 7.97K (25,978) | 52956 | 2020-10-28 | SAMN12123861 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Spathodus erythrodon (2) | GCA_015108895.1_JUB6.scf | 693,558,222 | 61,337 | 18.98K (10,293) | 9.95K (20,553) | 52956 | 2020-10-29 | SAMN12123860 | PRJNA550295 | "CICHLID~X" | fish | ||
| forktongue goby | Chaenogobius annularis | GCA_015082035.1_agohaze_1 | 747,409,675 | 1,897 | 951.96K (212) | 803.22K (250) | 166741 | 2020-10-21 | SAMD00131633 | PRJDB7125 | The University of Tokyo | fish | ||
| bony fishes | Chalinochromis brichardi (2) | GCA_015102055.1_AVA9.scf | 695,644,622 | 72,547 | 16.94K (10,710) | 7.36K (27,755) | 34794 | 2020-10-29 | SAMN12123596 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Chalinochromis brichardi (2) | GCA_015104035.1_AVB2.scf | 688,018,494 | 73,639 | 16.66K (10,792) | 6.71K (30,034) | 34794 | 2020-10-29 | SAMN12123597 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Xenotilapia sima (4) | GCA_015102085.1_IUF7.scf | 695,915,575 | 73,479 | 16.87K (10,629) | 7.99K (24,435) | 32515 | 2020-10-29 | SAMN12123755 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Xenotilapia sima (4) | GCA_015104275.1_IUF8.scf | 691,810,432 | 76,063 | 15.65K (11,642) | 6.89K (29,405) | 32515 | 2020-10-29 | SAMN12123756 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Xenotilapia sima (4) | GCA_015111795.1_LBE9.scf | 687,591,382 | 78,018 | 14.82K (12,219) | 7.22K (27,850) | 32515 | 2020-10-29 | SAMN12124025 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Xenotilapia sima (4) | GCA_015111815.1_LBE2.scf | 701,095,240 | 73,281 | 16.82K (10,895) | 7.70K (26,241) | 32515 | 2020-10-29 | SAMN12124024 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Lepidiolamprologus elongatus (2) | GCA_015102115.1_AUG8.scf | 686,380,566 | 75,032 | 15.63K (11,744) | 6.45K (31,849) | 32503 | 2020-10-29 | SAMN12123594 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Lepidiolamprologus elongatus (2) | GCA_015103995.1_AUE6.scf | 677,572,979 | 77,458 | 14.63K (12,457) | 5.65K (36,309) | 32503 | 2020-10-29 | SAMN12123592 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Ctenochromis horei (2) | GCA_015102135.1_AVA8.scf | 687,435,822 | 64,531 | 18.51K (10,263) | 7.66K (26,786) | 194657 | 2020-10-29 | SAMN12123595 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Ctenochromis horei (2) | GCA_015103775.1_AXA7.scf | 691,579,143 | 59,842 | 20.82K (9,097) | 8.60K (23,577) | 194657 | 2020-10-29 | SAMN12123609 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Variabilichromis moorii (2) | GCA_015102175.1_AUC4.scf | 697,536,122 | 70,823 | 17.51K (10,356) | 7.35K (28,056) | 34807 | 2020-10-29 | SAMN12123589 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Variabilichromis moorii (2) | GCA_015102225.1_AUC3.scf | 716,053,702 | 63,896 | 20.96K (8,707) | 10.88K (18,653) | 34807 | 2020-10-29 | SAMN12123588 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus fasciatus (2) | GCA_015102195.1_AUE7.scf | 707,392,205 | 70,481 | 17.41K (10,720) | 8.40K (24,483) | 272721 | 2020-10-29 | SAMN12123593 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus fasciatus (2) | GCA_015103695.1_AXD5.scf | 699,856,313 | 70,465 | 17.06K (10,725) | 7.97K (25,696) | 272721 | 2020-10-29 | SAMN12123612 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Xenotilapia papilio (3) | GCA_015102255.1_A206.scf | 700,596,226 | 80,210 | 14.17K (13,344) | 6.91K (29,563) | 559346 | 2020-10-29 | SAMN12123584 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Xenotilapia papilio (3) | GCA_015106515.1_IVF5.scf | 672,259,770 | 87,453 | 11.94K (15,625) | 6.51K (30,856) | 559346 | 2020-10-29 | SAMN12123767 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Xenotilapia papilio (3) | GCA_015106585.1_IVF4.scf | 711,027,003 | 72,013 | 16.92K (11,164) | 8.33K (24,643) | 559346 | 2020-10-29 | SAMN12123766 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Pseudosimochromis babaulti (4) | GCA_015102275.1_AUB6.scf | 705,147,137 | 65,473 | 18.33K (10,731) | 10.12K (20,302) | 8156 | 2020-10-29 | SAMN12123587 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Pseudosimochromis babaulti (4) | GCA_015104015.1_AVB6.scf | 708,187,066 | 69,400 | 17.04K (11,717) | 9.71K (21,239) | 8156 | 2020-10-29 | SAMN12123598 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Pseudosimochromis babaulti (4) | GCA_015107015.1_JUA4.scf | 715,582,419 | 53,783 | 24.52K (7,926) | 11.92K (17,195) | 8156 | 2020-10-29 | SAMN12123859 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Pseudosimochromis babaulti (4) | GCA_015107055.1_JUA3.scf | 692,965,816 | 60,663 | 20.18K (9,584) | 8.05K (25,357) | 8156 | 2020-10-29 | SAMN12123858 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Aulonocranus dewindti (2) | GCA_015102295.1_AUA9.scf | 678,090,864 | 73,653 | 16.79K (10,563) | 6.88K (28,329) | 27731 | 2020-10-29 | SAMN12123586 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Aulonocranus dewindti (2) | GCA_015102315.1_AUA1.scf | 683,744,053 | 74,698 | 16.54K (10,824) | 7.12K (27,683) | 27731 | 2020-10-29 | SAMN12123585 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus hecqui (3) | GCA_015102335.1_A142.scf | 715,079,083 | 66,868 | 18.80K (9,851) | 8.56K (24,224) | 329912 | 2020-10-29 | SAMN12123582 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus hecqui (3) | GCA_015103495.1_Bel13.scf | 671,934,787 | 85,608 | 12.68K (14,480) | 6.25K (32,195) | 329912 | 2020-10-29 | SAMN12123624 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus hecqui (3) | GCA_015103515.1_Bel14.scf | 678,459,838 | 85,090 | 12.85K (14,259) | 6.42K (31,424) | 329912 | 2020-10-29 | SAMN12123625 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus nigriventris (2) | GCA_015102355.1_A108.scf | 714,664,917 | 68,231 | 19.24K (9,407) | 9.38K (21,335) | 309900 | 2020-10-29 | SAMN12123581 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus nigriventris (2) | GCA_015113015.1_LJC3.scf | 716,037,962 | 69,494 | 18.82K (9,628) | 9.73K (20,708) | 309900 | 2020-10-29 | SAMN12124114 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Benthochromis tricoti (2) | GCA_015102395.1_LDA9.scf | 677,888,442 | 68,499 | 16.24K (11,878) | 6.16K (33,413) | 158760 | 2020-10-29 | SAMN12124045 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Benthochromis tricoti (2) | GCA_015111415.1_LDA7.scf | 675,405,680 | 62,715 | 18.26K (10,483) | 6.08K (34,014) | 158760 | 2020-10-29 | SAMN12124044 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Tilapia brevimanus | GCA_015102415.1_JWF9.scf | 746,799,404 | 56,581 | 25.84K (7,803) | 11.67K (18,136) | 158772 | 2020-10-29 | SAMN12123913 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus calliurus (2) | GCA_015102495.1_INC7.scf | 685,605,627 | 75,968 | 15.70K (11,308) | 8.37K (23,315) | 34801 | 2020-10-29 | SAMN12123676 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus calliurus (2) | GCA_015103035.1_ILA7.scf | 698,644,120 | 68,023 | 18.82K (9,497) | 8.17K (24,255) | 34801 | 2020-10-29 | SAMN12123651 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus sexfasciatus (2) | GCA_015102515.1_IND7.scf | 688,849,680 | 74,286 | 15.93K (11,549) | 6.28K (32,832) | 559353 | 2020-10-29 | SAMN12123677 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus sexfasciatus (2) | GCA_015105775.1_IND8.scf | 678,978,043 | 76,760 | 14.99K (12,190) | 5.64K (36,201) | 559353 | 2020-10-29 | SAMN12123678 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus modestus (2) | GCA_015102555.1_IMH3.scf | 710,568,538 | 66,541 | 19.40K (9,466) | 9.66K (20,868) | 272725 | 2020-10-29 | SAMN12123674 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus modestus (2) | GCA_015102595.1_IMG9.scf | 691,317,804 | 73,450 | 16.30K (11,169) | 6.84K (29,659) | 272725 | 2020-10-29 | SAMN12123673 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Xenotilapia nasus (2) | GCA_015102575.1_IMF7.scf | 674,943,917 | 79,058 | 14.11K (12,881) | 7.54K (26,118) | 2591263 | 2020-10-29 | SAMN12123671 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Xenotilapia nasus (2) | GCA_015102635.1_IMF8.scf | 701,096,423 | 68,577 | 18.40K (10,093) | 8.21K (24,464) | 2591263 | 2020-10-29 | SAMN12123672 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Julidochromis sp. 'kombe' AB-2019 (2) | GCA_015102605.1_INA6.scf | 677,598,341 | 79,658 | 14.04K (12,861) | 7.28K (27,462) | 2591273 | 2020-10-29 | SAMN12123675 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Julidochromis sp. 'kombe' AB-2019 (2) | GCA_015102915.1_ILD9.scf | 683,487,422 | 75,257 | 15.58K (11,554) | 7.87K (25,050) | 2591273 | 2020-10-29 | SAMN12123657 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Telmatochromis temporalis (2) | GCA_015102655.1_IMB3.scf | 651,608,604 | 89,193 | 11.55K (15,321) | 5.51K (35,515) | 32511 | 2020-10-29 | SAMN12123667 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Telmatochromis temporalis (2) | GCA_015102735.1_IMB4.scf | 683,388,748 | 72,516 | 16.68K (10,763) | 6.98K (28,292) | 32511 | 2020-10-29 | SAMN12123668 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus obscurus (2) | GCA_015102675.1_IMA2.scf | 686,328,513 | 72,650 | 16.76K (10,645) | 7.92K (24,984) | 559352 | 2020-10-29 | SAMN12123666 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus obscurus (2) | GCA_015102755.1_IMA1.scf | 690,232,326 | 75,267 | 15.85K (11,443) | 8.15K (24,343) | 559352 | 2020-10-29 | SAMN12123665 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Lepidiolamprologus kendalli (2) | GCA_015102695.1_IMD1.scf | 712,814,048 | 68,616 | 18.33K (10,113) | 10.03K (20,281) | 329923 | 2020-10-29 | SAMN12123669 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Lepidiolamprologus kendalli (2) | GCA_015102705.1_IMD2.scf | 679,556,897 | 76,346 | 14.69K (12,567) | 5.85K (35,134) | 329923 | 2020-10-29 | SAMN12123670 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Benthochromis melanoides (3) | GCA_015102775.1_ILG3.scf | 691,444,567 | 58,184 | 20.33K (9,518) | 8.23K (25,016) | 299336 | 2020-10-29 | SAMN12123662 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Benthochromis melanoides (3) | GCA_015106195.1_IXB8.scf | 690,173,480 | 62,544 | 18.28K (10,617) | 8.48K (24,391) | 299336 | 2020-10-29 | SAMN12123784 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Benthochromis melanoides (3) | GCA_015107975.1_IZA2.scf | 683,118,534 | 63,214 | 18.00K (10,669) | 8.69K (23,303) | 299336 | 2020-10-29 | SAMN12123796 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Bathybates graueri (2) | GCA_015102795.1_ILG7.scf | 707,439,858 | 70,388 | 15.77K (12,719) | 7.79K (27,132) | 293468 | 2020-10-29 | SAMN12123663 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Bathybates graueri (2) | GCA_015104215.1_IUI8.scf | 687,650,874 | 76,491 | 13.69K (14,323) | 7.50K (27,615) | 293468 | 2020-10-29 | SAMN12123761 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Benthochromis horii | GCA_015102815.1_ILF8.scf | 691,640,671 | 58,247 | 20.48K (9,477) | 8.41K (24,290) | 559342 | 2020-10-29 | SAMN12123661 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus mustax (2) | GCA_015102835.1_ILH1.scf | 676,535,975 | 99,271 | 10.36K (18,247) | 5.83K (34,967) | 449322 | 2020-10-29 | SAMN12123664 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus mustax (2) | GCA_015102955.1_ILB4.scf | 695,925,140 | 70,086 | 17.67K (10,304) | 7.54K (26,705) | 449322 | 2020-10-29 | SAMN12123652 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus sp. 'kombe' AB-2019 (2) | GCA_015102855.1_ILE6.scf | 677,961,402 | 72,675 | 16.72K (10,556) | 6.40K (30,848) | 2591287 | 2020-10-29 | SAMN12123659 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus sp. 'kombe' AB-2019 (2) | GCA_015102895.1_ILE5.scf | 627,962,048 | 93,696 | 10.29K (16,824) | 5.08K (37,235) | 2591287 | 2020-10-29 | SAMN12123658 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Bathybates leo | GCA_015102875.1_ILF7.scf | 683,123,695 | 84,767 | 11.95K (16,511) | 6.49K (32,403) | 293470 | 2020-10-29 | SAMN12123660 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Telmatochromis sp. 'lufubu' AB-2019 | GCA_015102975.1_HXC8.scf | 700,980,058 | 71,849 | 16.68K (11,143) | 7.51K (27,514) | 2591305 | 2020-10-29 | SAMN12123650 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus brevis (2) | GCA_015102995.1_ILB7.scf | 665,616,206 | 82,198 | 13.66K (12,857) | 6.78K (28,324) | 34800 | 2020-10-29 | SAMN12123654 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus brevis (2) | GCA_015103015.1_ILB6.scf | 665,718,898 | 80,876 | 13.77K (12,643) | 6.61K (29,346) | 34800 | 2020-10-29 | SAMN12123653 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Orthochromis indermauri (2) | GCA_015103055.1_HXC7.scf | 681,965,277 | 74,859 | 14.38K (13,546) | 6.70K (30,908) | 2527915 | 2020-10-29 | SAMN12123649 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Orthochromis indermauri (2) | GCA_015103075.1_HXC6.scf | 715,093,360 | 68,301 | 16.91K (11,985) | 10.06K (20,921) | 2527915 | 2020-10-29 | SAMN12123648 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Haplochromis sp. Chipwa (2) | GCA_015103095.1_HXC5.scf | 700,233,646 | 57,837 | 21.95K (8,776) | 9.72K (21,008) | 1892571 | 2020-10-29 | SAMN12123647 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Haplochromis sp. Chipwa (2) | GCA_015103135.1_HXC4.scf | 674,352,407 | 69,271 | 16.36K (11,464) | 7.33K (27,349) | 1892571 | 2020-10-29 | SAMN12123646 | PRJNA550295 | "CICHLID~X" | fish | ||
| masked julie | Julidochromis transcriptus (2) | GCA_015103115.1_HFG1287.scf | 713,111,330 | 63,515 | 21.00K (8,676) | 9.29K (22,020) | 70784 | 2020-10-29 | SAMN12123645 | PRJNA550295 | "CICHLID~X" | fish | ||
| masked julie | Julidochromis transcriptus (2) | GCA_015113055.1_LJC2.scf | 711,616,841 | 65,592 | 20.54K (8,870) | 9.97K (20,013) | 70784 | 2020-10-29 | SAMN12124113 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Petrochromis fasciolatus (2) | GCA_015103155.1_GPH7.scf | 673,260,571 | 60,938 | 20.02K (9,150) | 6.73K (28,994) | 287489 | 2020-10-29 | SAMN12123644 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Petrochromis fasciolatus (2) | GCA_015107775.1_JAE1.scf | 671,206,416 | 64,225 | 18.02K (10,425) | 6.01K (33,591) | 287489 | 2020-10-29 | SAMN12123814 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus cylindricus (2) | GCA_015103215.1_GPH1.scf | 706,458,197 | 67,685 | 18.82K (9,682) | 9.98K (20,126) | 34804 | 2020-10-29 | SAMN12123642 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus cylindricus (2) | GCA_015103235.1_GPH2.scf | 711,903,753 | 65,457 | 19.79K (9,272) | 10.12K (19,638) | 34804 | 2020-10-29 | SAMN12123643 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Paracyprichromis nigripinnis (2) | GCA_015103255.1_GPC6.scf | 678,539,533 | 65,924 | 17.10K (11,157) | 6.97K (29,185) | 309875 | 2020-10-29 | SAMN12123637 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Paracyprichromis nigripinnis (2) | GCA_015103275.1_GPC4.scf | 701,602,761 | 59,042 | 20.83K (9,415) | 10.56K (19,265) | 309875 | 2020-10-29 | SAMN12123636 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Ptychochromis oligocanthus | GCA_015103295.1_FPO1.scf | 707,022,484 | 119,860 | 8.31K (25,866) | 4.00K (56,952) | 2591259 | 2020-10-29 | SAMN12123633 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Bathybates fasciatus (2) | GCA_015103315.1_GPB2.scf | 680,422,350 | 90,092 | 10.96K (17,985) | 6.36K (32,834) | 219385 | 2020-10-29 | SAMN12123635 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Bathybates fasciatus (2) | GCA_015104405.1_ITH3.scf | 716,743,677 | 65,930 | 17.37K (11,468) | 8.37K (25,404) | 219385 | 2020-10-29 | SAMN12123750 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Trematocara nigrifrons (2) | GCA_015103335.1_GPA1.scf | 639,062,091 | 105,653 | 9.63K (17,716) | 5.58K (33,104) | 1131402 | 2020-10-29 | SAMN12123634 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Trematocara nigrifrons (2) | GCA_015104335.1_IUE5.scf | 701,134,653 | 109,579 | 10.57K (17,249) | 7.08K (26,869) | 1131402 | 2020-10-29 | SAMN12123753 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Trematochromis benthicola (2) | GCA_015103355.1_DMD1.scf | 703,007,347 | 57,403 | 21.98K (8,921) | 7.74K (27,183) | 1171431 | 2020-10-29 | SAMN12123632 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Trematochromis benthicola (2) | GCA_015108035.1_IYA8.scf | 699,677,164 | 63,201 | 18.95K (10,329) | 8.50K (24,503) | 1171431 | 2020-10-29 | SAMN12123794 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Callochromis macrops (2) | GCA_015103375.1_BND3.scf | 690,412,700 | 81,634 | 15.34K (11,812) | 6.90K (28,977) | 32491 | 2020-10-29 | SAMN12123630 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Callochromis macrops (2) | GCA_015103395.1_BND5.scf | 698,766,750 | 80,240 | 15.93K (11,346) | 7.84K (25,207) | 32491 | 2020-10-29 | SAMN12123631 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Enantiopus melanogenys (2) | GCA_015103415.1_BNC5.scf | 707,231,386 | 78,793 | 15.19K (12,091) | 8.48K (23,558) | 2591250 | 2020-10-29 | SAMN12123629 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Enantiopus melanogenys (2) | GCA_015103935.1_AWC5.scf | 697,822,003 | 80,993 | 14.48K (12,547) | 7.43K (26,777) | 2591250 | 2020-10-29 | SAMN12123604 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Cyprichromis sp. 'kibishi' AB-2019 (2) | GCA_015103435.1_Bel18.scf | 674,991,828 | 77,109 | 13.75K (14,013) | 7.00K (29,082) | 2591271 | 2020-10-29 | SAMN12123627 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Cyprichromis sp. 'kibishi' AB-2019 (2) | GCA_015103475.1_Bel16.scf | 661,094,487 | 75,835 | 13.77K (13,740) | 6.24K (32,237) | 2591271 | 2020-10-29 | SAMN12123626 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Trematocara variabile | GCA_015103455.1_Bel33.scf | 597,795,682 | 133,714 | 6.15K (27,606) | 4.10K (44,101) | 1452741 | 2020-10-29 | SAMN12123628 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Ophthalmotilapia heterodonta (2) | GCA_015103535.1_Bel12.scf | 683,285,184 | 88,601 | 12.48K (14,892) | 6.68K (30,117) | 68045 | 2020-10-29 | SAMN12123623 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Ophthalmotilapia heterodonta (2) | GCA_015103575.1_Bel06.scf | 664,310,370 | 99,873 | 10.14K (18,358) | 5.42K (36,968) | 68045 | 2020-10-29 | SAMN12123620 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Chalinochromis popelini (2) | GCA_015103555.1_Bel09.scf | 689,823,753 | 80,053 | 14.53K (12,594) | 7.25K (27,905) | 32494 | 2020-10-29 | SAMN12123622 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Chalinochromis popelini (2) | GCA_015103615.1_Bel07.scf | 663,284,680 | 105,635 | 9.40K (19,736) | 4.39K (46,749) | 32494 | 2020-10-29 | SAMN12123621 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Xenotilapia sp. 'kilesa' AB-2019 (2) | GCA_015103595.1_Bel03.scf | 662,012,010 | 93,311 | 11.03K (16,387) | 5.60K (35,499) | 2591313 | 2020-10-29 | SAMN12123619 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Xenotilapia sp. 'kilesa' AB-2019 (2) | GCA_015103635.1_Bel01.scf | 710,886,173 | 72,378 | 17.53K (10,346) | 9.42K (21,124) | 2591313 | 2020-10-29 | SAMN12123618 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Cyathopharynx furcifer (2) | GCA_015103655.1_AYE5.scf | 693,095,359 | 73,432 | 17.00K (10,619) | 7.72K (25,930) | 27741 | 2020-10-29 | SAMN12123617 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Cyathopharynx furcifer (2) | GCA_015103875.1_AVH2.scf | 689,949,097 | 73,776 | 16.87K (10,657) | 7.59K (26,158) | 27741 | 2020-10-29 | SAMN12123601 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Ophthalmotilapia nasuta (2) | GCA_015103675.1_AXH6.scf | 689,308,810 | 75,358 | 16.13K (11,184) | 7.16K (28,145) | 68046 | 2020-10-29 | SAMN12123614 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Ophthalmotilapia nasuta (2) | GCA_015103715.1_AXH8.scf | 692,589,657 | 74,589 | 16.41K (11,049) | 7.44K (26,970) | 68046 | 2020-10-29 | SAMN12123615 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Xenotilapia spiloptera (2) | GCA_015103755.1_AXB8.scf | 696,071,628 | 82,257 | 13.82K (13,528) | 6.95K (29,718) | 240486 | 2020-10-29 | SAMN12123611 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Xenotilapia spiloptera (2) | GCA_015103795.1_AXB5.scf | 695,906,706 | 77,387 | 15.11K (12,247) | 7.18K (28,404) | 240486 | 2020-10-29 | SAMN12123610 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Limnotilapia dardennii (2) | GCA_015103815.1_AWI5.scf | 683,730,957 | 57,475 | 21.62K (8,675) | 7.01K (29,214) | 244511 | 2020-10-29 | SAMN12123607 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Limnotilapia dardennii (2) | GCA_015103835.1_AWI6.scf | 682,546,233 | 59,787 | 20.49K (9,158) | 6.77K (30,446) | 244511 | 2020-10-29 | SAMN12123608 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Petrochromis polyodon (2) | GCA_015103895.1_AWI4.scf | 684,391,845 | 58,994 | 20.98K (9,105) | 6.86K (30,154) | 244514 | 2020-10-29 | SAMN12123606 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Petrochromis polyodon (2) | GCA_015103915.1_AWB9.scf | 684,673,751 | 58,243 | 21.18K (8,967) | 6.99K (29,535) | 244514 | 2020-10-29 | SAMN12123603 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Lepidiolamprologus attenuatus (2) | GCA_015103955.1_AVG5.scf | 696,192,362 | 71,640 | 16.96K (10,776) | 7.52K (27,071) | 272720 | 2020-10-29 | SAMN12123600 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Lepidiolamprologus attenuatus (2) | GCA_015103975.1_AVD4.scf | 681,975,098 | 73,364 | 16.00K (11,270) | 6.11K (33,427) | 272720 | 2020-10-29 | SAMN12123599 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus crassus (2) | GCA_015104075.1_IVF1.scf | 696,710,312 | 68,238 | 18.90K (9,416) | 8.40K (23,435) | 2591256 | 2020-10-29 | SAMN12123765 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus crassus (2) | GCA_015104155.1_IVE8.scf | 689,236,898 | 70,129 | 17.73K (9,973) | 7.63K (25,703) | 2591256 | 2020-10-29 | SAMN12123764 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Xenotilapia bathyphilus (2) | GCA_015104175.1_IVB4.scf | 691,266,287 | 73,265 | 16.94K (10,416) | 8.05K (23,999) | 2759385 | 2020-10-29 | SAMN12123762 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Xenotilapia bathyphilus (2) | GCA_015104235.1_IVB5.scf | 678,670,477 | 79,881 | 14.30K (12,409) | 7.40K (26,128) | 2759385 | 2020-10-29 | SAMN12123763 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Xenochromis hecqui (2) | GCA_015104195.1_IUI7.scf | 696,183,031 | 58,616 | 20.53K (9,500) | 8.32K (24,817) | 452219 | 2020-10-29 | SAMN12123760 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Xenochromis hecqui (2) | GCA_015107655.1_JAH7.scf | 706,074,928 | 54,697 | 22.63K (8,733) | 10.03K (20,801) | 452219 | 2020-10-29 | SAMN12123822 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Reganochromis calliurus (2) | GCA_015104255.1_IUI4.scf | 688,230,200 | 62,563 | 18.39K (10,470) | 9.38K (21,676) | 70788 | 2020-10-29 | SAMN12123758 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Reganochromis calliurus (2) | GCA_015104295.1_IUI1.scf | 669,914,143 | 71,813 | 14.91K (12,892) | 7.20K (28,179) | 70788 | 2020-10-29 | SAMN12123757 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Trematocara stigmaticum (2) | GCA_015104315.1_IUE7.scf | 659,122,371 | 116,520 | 8.62K (20,526) | 5.27K (36,216) | 2591262 | 2020-10-29 | SAMN12123754 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Trematocara stigmaticum (2) | GCA_015107995.1_IZE1.scf | 676,193,654 | 96,657 | 12.14K (14,466) | 6.87K (27,263) | 2591262 | 2020-10-29 | SAMN12123803 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Trematocara macrostoma (2) | GCA_015104355.1_IUD9.scf | 705,805,415 | 97,392 | 12.58K (14,459) | 7.52K (25,964) | 195092 | 2020-10-29 | SAMN12123752 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Trematocara macrostoma (2) | GCA_015104375.1_IUD8.scf | 673,540,315 | 103,548 | 11.02K (16,109) | 6.35K (29,866) | 195092 | 2020-10-29 | SAMN12123751 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Limnochromis staneri (3) | GCA_015104425.1_ITC2.scf | 696,635,811 | 58,402 | 21.36K (8,954) | 9.46K (21,651) | 286580 | 2020-10-29 | SAMN12123747 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Limnochromis staneri (3) | GCA_015104515.1_ITA6.scf | 715,886,827 | 52,619 | 25.57K (7,637) | 12.58K (16,250) | 286580 | 2020-10-29 | SAMN12123743 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Limnochromis staneri (3) | GCA_015106275.1_IXB6.scf | 686,726,512 | 60,321 | 20.04K (9,590) | 6.17K (33,572) | 286580 | 2020-10-29 | SAMN12123783 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Bathybates vittatus (3) | GCA_015104445.1_ITD7.scf | 684,389,959 | 79,176 | 13.35K (14,527) | 5.50K (38,015) | 293469 | 2020-10-29 | SAMN12123748 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Bathybates vittatus (3) | GCA_015107415.1_JDE7.scf | 699,221,876 | 84,991 | 12.28K (16,615) | 6.46K (33,035) | 293469 | 2020-10-29 | SAMN12123838 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Bathybates vittatus (3) | GCA_015107455.1_JDE6.scf | 703,166,819 | 78,993 | 13.57K (14,742) | 6.72K (31,851) | 293469 | 2020-10-29 | SAMN12123837 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus christyi (2) | GCA_015104465.1_ITG2.scf | 699,213,940 | 71,074 | 17.23K (10,707) | 7.85K (25,860) | VU | 34803 | 2020-10-29 | SAMN12123749 | PRJNA550295 | "CICHLID~X" | fish | |
| bony fishes | Neolamprologus christyi (2) | GCA_015107815.1_IZI8.scf | 676,309,416 | 79,280 | 14.23K (12,626) | 7.34K (26,496) | VU | 34803 | 2020-10-29 | SAMN12123809 | PRJNA550295 | "CICHLID~X" | fish | |
| bony fishes | Cyprichromis leptosoma (2) | GCA_015104555.1_ISI6.scf | 672,231,523 | 65,653 | 17.05K (11,227) | 6.50K (31,234) | 51791 | 2020-10-29 | SAMN12123741 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Cyprichromis leptosoma (2) | GCA_015104635.1_ISI2.scf | 686,586,522 | 61,847 | 18.75K (10,367) | 7.92K (25,809) | 51791 | 2020-10-29 | SAMN12123740 | PRJNA550295 | "CICHLID~X" | fish | ||
| spangled cichlid | Limnochromis auritus (2) | GCA_015104565.1_ITB1.scf | 690,306,064 | 54,155 | 24.05K (7,813) | 7.88K (25,713) | 27749 | 2020-10-29 | SAMN12123744 | PRJNA550295 | "CICHLID~X" | fish | ||
| spangled cichlid | Limnochromis auritus (2) | GCA_015107695.1_JAF5.scf | 679,715,219 | 60,295 | 20.07K (9,439) | 6.50K (31,034) | 27749 | 2020-10-29 | SAMN12123817 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Lobochilotes labiatus (2) | GCA_015104595.1_ISD8.scf | 685,969,866 | 61,345 | 19.40K (9,784) | 9.21K (21,969) | 28810 | 2020-10-29 | SAMN12123738 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Lobochilotes labiatus (2) | GCA_015104615.1_ISE5.scf | 673,223,275 | 66,854 | 16.89K (11,058) | 7.66K (26,113) | 28810 | 2020-10-29 | SAMN12123739 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Altolamprologus compressiceps (2) | GCA_015104655.1_ISC9.scf | 704,179,329 | 70,922 | 17.14K (10,821) | 8.44K (23,852) | 34793 | 2020-10-29 | SAMN12123737 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Altolamprologus compressiceps (2) | GCA_015104775.1_ISB1.scf | 682,927,146 | 78,633 | 14.45K (12,772) | 6.43K (31,359) | 34793 | 2020-10-29 | SAMN12123733 | PRJNA550295 | "CICHLID~X" | fish | ||
| golden julie | Julidochromis ornatus (2) | GCA_015104675.1_ISC1.scf | 693,065,394 | 70,665 | 17.83K (10,160) | 7.54K (26,543) | 272722 | 2020-10-29 | SAMN12123736 | PRJNA550295 | "CICHLID~X" | fish | ||
| golden julie | Julidochromis ornatus (2) | GCA_015104695.1_ISB7.scf | 672,971,391 | 76,354 | 14.90K (11,827) | 7.16K (27,394) | 272722 | 2020-10-29 | SAMN12123735 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus pulcher (2) | GCA_015104715.1_ISB3.scf | 688,076,663 | 74,460 | 15.85K (11,249) | 8.57K (23,004) | 184151 | 2020-10-29 | SAMN12123734 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus pulcher (2) | GCA_015104735.1_ISA6.scf | 678,411,670 | 78,307 | 14.58K (12,278) | 7.60K (25,795) | 184151 | 2020-10-29 | SAMN12123731 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus savoryi (2) | GCA_015104745.1_ISA8.scf | 697,328,879 | 67,926 | 19.01K (9,329) | 8.51K (22,860) | 184152 | 2020-10-29 | SAMN12123732 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus savoryi (2) | GCA_015106135.1_IYA4.scf | 669,554,863 | 78,484 | 14.51K (12,053) | 7.37K (25,884) | 184152 | 2020-10-29 | SAMN12123790 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Trematocara marginatum (2) | GCA_015104795.1_ISA3.scf | 678,914,255 | 100,501 | 11.70K (15,026) | 6.98K (26,785) | 1084758 | 2020-10-29 | SAMN12123730 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Trematocara marginatum (2) | GCA_015104835.1_ISA1.scf | 636,283,645 | 106,076 | 9.56K (17,896) | 5.28K (35,184) | 1084758 | 2020-10-29 | SAMN12123729 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Altolamprologus sp. 'compressiceps shell' AB-2019 (2) | GCA_015104815.1_IRH4.scf | 653,157,236 | 88,918 | 11.39K (15,642) | 5.86K (33,260) | 2591265 | 2020-10-29 | SAMN12123726 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Altolamprologus sp. 'compressiceps shell' AB-2019 (2) | GCA_015104895.1_IRH2.scf | 651,032,924 | 89,027 | 11.41K (15,689) | 5.61K (34,834) | 2591265 | 2020-10-29 | SAMN12123725 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Telmatochromis sp. 'shell' AB-2019 (2) | GCA_015104855.1_IRI9.scf | 675,863,732 | 77,228 | 14.84K (11,977) | 7.27K (26,887) | 2591306 | 2020-10-29 | SAMN12123728 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Telmatochromis sp. 'shell' AB-2019 (2) | GCA_015104875.1_IRI8.scf | 683,865,305 | 70,391 | 17.38K (10,164) | 6.77K (29,632) | 2591306 | 2020-10-29 | SAMN12123727 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Xenotilapia singularis (2) | GCA_015104915.1_IRE3.scf | 678,491,207 | 111,333 | 8.77K (21,755) | 5.62K (36,417) | 2591264 | 2020-10-29 | SAMN12123722 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Xenotilapia singularis (2) | GCA_015104975.1_IRD9.scf | 666,020,613 | 87,823 | 12.21K (14,607) | 5.16K (38,574) | 2591264 | 2020-10-29 | SAMN12123721 | PRJNA550295 | "CICHLID~X" | fish | ||
| Descamp's strange-tooth cichlid | Ectodus descampsii (2) | GCA_015104925.1_IRD8.scf | 667,238,878 | 77,882 | 14.76K (11,829) | 7.76K (24,351) | 27743 | 2020-10-29 | SAMN12123720 | PRJNA550295 | "CICHLID~X" | fish | ||
| Descamp's strange-tooth cichlid | Ectodus descampsii (2) | GCA_015104995.1_IRD7.scf | 697,273,593 | 69,055 | 18.89K (9,403) | 9.73K (19,628) | 27743 | 2020-10-29 | SAMN12123719 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus multifasciatus | GCA_015104955.1_IRF8.scf | 661,545,306 | 88,871 | 11.59K (15,502) | 5.94K (33,190) | 420107 | 2020-10-29 | SAMN12123724 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Julidochromis dickfeldi (2) | GCA_015105015.1_IRC4.scf | 708,899,645 | 66,244 | 19.48K (9,425) | 9.61K (21,128) | 449317 | 2020-10-29 | SAMN12123717 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Julidochromis dickfeldi (2) | GCA_015105055.1_IRC5.scf | 687,430,740 | 75,123 | 15.60K (11,490) | 8.47K (23,368) | 449317 | 2020-10-29 | SAMN12123718 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Julidochromis sp. 'regani south' AB-2019 (2) | GCA_015105035.1_IRB8.scf | 671,744,614 | 73,433 | 16.38K (10,631) | 5.98K (32,713) | 2591275 | 2020-10-29 | SAMN12123716 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Julidochromis sp. 'regani south' AB-2019 (2) | GCA_015105075.1_IRB2.scf | 672,223,289 | 78,892 | 14.37K (12,278) | 7.21K (27,043) | 2591275 | 2020-10-29 | SAMN12123715 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Lestradea perspicax (2) | GCA_015105095.1_IRA2.scf | 670,395,631 | 74,544 | 16.15K (10,827) | 6.55K (29,319) | 27747 | 2020-10-29 | SAMN12123714 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Lestradea perspicax (2) | GCA_015105115.1_IRA1.scf | 648,051,608 | 84,088 | 12.66K (13,859) | 6.24K (30,441) | 27747 | 2020-10-29 | SAMN12123713 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Ophthalmotilapia ventralis (2) | GCA_015105135.1_IQE4.scf | 679,897,602 | 79,476 | 14.46K (12,450) | 7.72K (25,426) | 27755 | 2020-10-29 | SAMN12123711 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Ophthalmotilapia ventralis (2) | GCA_015105175.1_IQD3.scf | 668,909,459 | 79,520 | 14.46K (12,258) | 5.80K (33,932) | 27755 | 2020-10-29 | SAMN12123710 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Perissodus microlepis (2) | GCA_015105155.1_IQI4.scf | 681,451,575 | 69,304 | 15.82K (12,459) | 7.67K (26,819) | 32509 | 2020-10-29 | SAMN12123712 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Perissodus microlepis (2) | GCA_015105195.1_IQC4.scf | 703,474,312 | 56,991 | 21.24K (9,330) | 9.22K (22,700) | 32509 | 2020-10-29 | SAMN12123709 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Paracyprichromis sp. 'brieni south' AB-2019 (2) | GCA_015105215.1_IQC1.scf | 665,460,873 | 72,915 | 14.45K (13,211) | 6.03K (33,980) | 2591291 | 2020-10-29 | SAMN12123708 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Paracyprichromis sp. 'brieni south' AB-2019 (2) | GCA_015105235.1_IQB9.scf | 685,889,387 | 62,804 | 18.18K (10,742) | 7.02K (29,550) | 2591291 | 2020-10-29 | SAMN12123707 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Haplotaxodon microlepis | GCA_015105255.1_IQB8.scf | 725,877,926 | 52,021 | 25.20K (7,982) | 12.46K (17,030) | 70786 | 2020-10-29 | SAMN12123706 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Haplotaxodon trifasciatus | GCA_015105275.1_IQB6.scf | 689,492,295 | 60,802 | 19.30K (10,058) | 7.15K (28,560) | 299339 | 2020-10-29 | SAMN12123705 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus caudopunctatus (2) | GCA_015105295.1_IQA3.scf | 716,779,809 | 69,091 | 18.36K (10,058) | 10.04K (20,075) | 34802 | 2020-10-29 | SAMN12123703 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus caudopunctatus (2) | GCA_015105315.1_IQA4.scf | 685,789,077 | 77,116 | 15.12K (12,092) | 6.34K (31,463) | 34802 | 2020-10-29 | SAMN12123704 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus tetracanthus (2) | GCA_015105335.1_IPG3.scf | 711,815,290 | 67,501 | 19.00K (9,732) | 10.03K (19,884) | 32508 | 2020-10-29 | SAMN12123701 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus tetracanthus (2) | GCA_015105355.1_IPF7.scf | 681,445,762 | 77,564 | 14.88K (12,178) | 7.63K (25,622) | 32508 | 2020-10-29 | SAMN12123700 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Xenotilapia boulengeri (2) | GCA_015105375.1_IPE7.scf | 684,286,372 | 76,516 | 15.48K (11,400) | 8.04K (23,780) | 240480 | 2020-10-29 | SAMN12123698 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Xenotilapia boulengeri (2) | GCA_015105415.1_IPE3.scf | 685,188,279 | 81,337 | 13.79K (13,097) | 7.55K (26,294) | 240480 | 2020-10-29 | SAMN12123697 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Interochromis loocki (2) | GCA_015105395.1_IPF3.scf | 678,029,334 | 63,951 | 18.03K (10,343) | 8.53K (23,355) | 683192 | 2020-10-29 | SAMN12123699 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Interochromis loocki (2) | GCA_015105475.1_IPB6.scf | 694,364,440 | 56,205 | 22.43K (8,493) | 8.59K (23,765) | 683192 | 2020-10-29 | SAMN12123694 | PRJNA550295 | "CICHLID~X" | fish | ||
| threadfin cichlid | Petrochromis trewavasae ephippium (2) | GCA_015105435.1_IPC1.scf | 688,950,699 | 60,882 | 19.80K (9,676) | 9.69K (20,989) | 244512 | 2020-10-29 | SAMN12123695 | PRJNA550295 | "CICHLID~X" | fish | ||
| threadfin cichlid | Petrochromis trewavasae ephippium (2) | GCA_015108055.1_IYA5.scf | 661,164,860 | 71,999 | 14.88K (12,590) | 6.10K (33,324) | 244512 | 2020-10-29 | SAMN12123791 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Lamprologus lemairii (2) | GCA_015105455.1_IPD6.scf | 674,355,417 | 81,852 | 13.28K (13,587) | 6.85K (29,024) | 272724 | 2020-10-29 | SAMN12123696 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Lamprologus lemairii (2) | GCA_015107875.1_IZI7.scf | 675,673,633 | 78,384 | 14.21K (12,774) | 5.58K (36,783) | 272724 | 2020-10-29 | SAMN12123808 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Lepidiolamprologus cunningtoni (2) | GCA_015105495.1_IOH5.scf | 717,162,431 | 68,462 | 19.11K (9,594) | 10.91K (18,288) | 287481 | 2020-10-29 | SAMN12123693 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Lepidiolamprologus cunningtoni (2) | GCA_015105535.1_IOH4.scf | 695,509,545 | 73,665 | 16.36K (11,352) | 7.09K (29,004) | 287481 | 2020-10-29 | SAMN12123692 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Tropheus sp. 'red' AB-2019 (2) | GCA_015105515.1_IOE1.scf | 670,985,934 | 65,798 | 17.35K (10,899) | 5.85K (34,814) | 2591312 | 2020-10-29 | SAMN12123689 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Tropheus sp. 'red' AB-2019 (2) | GCA_015105585.1_IOD9.scf | 691,261,817 | 58,180 | 21.29K (8,951) | 8.43K (24,056) | 2591312 | 2020-10-29 | SAMN12123688 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Cyathopharynx foae (2) | GCA_015105575.1_IOD6.scf | 647,650,385 | 84,422 | 12.73K (13,571) | 5.77K (33,051) | 284571 | 2020-10-29 | SAMN12123687 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Cyathopharynx foae (2) | GCA_015105635.1_IOD4.scf | 669,535,682 | 77,243 | 15.01K (11,693) | 7.32K (26,198) | 284571 | 2020-10-29 | SAMN12123686 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Cyphotilapia gibberosa (2) | GCA_015105615.1_INH9.scf | 705,241,427 | 55,909 | 22.77K (8,614) | 9.16K (22,780) | 1355922 | 2020-10-29 | SAMN12123685 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Cyphotilapia gibberosa (2) | GCA_015105655.1_INH7.scf | 707,718,098 | 54,192 | 23.75K (8,223) | 9.60K (21,563) | 1355922 | 2020-10-29 | SAMN12123684 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Xenotilapia leptura (2) | GCA_015105675.1_INF2.scf | 713,931,601 | 80,289 | 14.32K (13,642) | 8.78K (23,468) | 559344 | 2020-10-29 | SAMN12123682 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Xenotilapia leptura (2) | GCA_015105755.1_INF1.scf | 714,186,965 | 77,717 | 15.10K (12,922) | 8.56K (24,061) | 559344 | 2020-10-29 | SAMN12123681 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Cyprichromis sp. 'jumbo' AB-2019 | GCA_015105695.1_INH1.scf | 698,829,690 | 52,843 | 23.29K (8,246) | 10.65K (19,090) | 2591270 | 2020-10-29 | SAMN12123683 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Plecodus straeleni (2) | GCA_015105715.1_INE9.scf | 703,106,879 | 56,617 | 21.52K (9,164) | 8.96K (23,366) | 167846 | 2020-10-29 | SAMN12123680 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Plecodus straeleni (2) | GCA_015105735.1_INE8.scf | 713,795,385 | 52,659 | 24.68K (7,997) | 12.20K (16,935) | 167846 | 2020-10-29 | SAMN12123679 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Telmatochromis brachygnathus (2) | GCA_015105895.1_JBE8.scf | 662,362,837 | 82,084 | 13.37K (13,121) | 6.69K (28,681) | 431670 | 2020-10-29 | SAMN12123827 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Telmatochromis brachygnathus (2) | GCA_015107635.1_JBE9.scf | 685,666,524 | 71,963 | 17.50K (9,871) | 7.85K (24,871) | 431670 | 2020-10-29 | SAMN12123828 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Xenotilapia rotundiventralis (2) | GCA_015105915.1_JBE6.scf | 672,830,152 | 85,741 | 12.43K (14,827) | 5.61K (35,978) | 559347 | 2020-10-29 | SAMN12123825 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Xenotilapia rotundiventralis (2) | GCA_015105935.1_JBE7.scf | 704,550,209 | 75,846 | 15.57K (11,981) | 9.60K (20,919) | 559347 | 2020-10-29 | SAMN12123826 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Telmatochromis vittatus (2) | GCA_015105955.1_JBD5.scf | 675,515,947 | 75,000 | 15.73K (11,068) | 7.87K (24,177) | 34811 | 2020-10-29 | SAMN12123823 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Telmatochromis vittatus (2) | GCA_015107575.1_JBD6.scf | 692,464,990 | 68,917 | 18.48K (9,393) | 9.18K (20,986) | 34811 | 2020-10-29 | SAMN12123824 | PRJNA550295 | "CICHLID~X" | fish | ||
| yellow sand cichlid | Xenotilapia flavipinnis (2) | GCA_015105975.1_JAF7.scf | 714,265,809 | 70,402 | 18.04K (10,285) | 10.33K (19,243) | 240481 | 2020-10-29 | SAMN12123818 | PRJNA550295 | "CICHLID~X" | fish | ||
| yellow sand cichlid | Xenotilapia flavipinnis (2) | GCA_015105995.1_JAF9.scf | 710,364,774 | 72,544 | 17.15K (10,799) | 10.26K (19,389) | 240481 | 2020-10-29 | SAMN12123819 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Baileychromis centropomoides (2) | GCA_015106015.1_JAB7.scf | 681,831,021 | 71,310 | 15.20K (12,809) | 7.75K (26,616) | 286574 | 2020-10-29 | SAMN12123812 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Baileychromis centropomoides (2) | GCA_015107735.1_JAE9.scf | 706,241,213 | 57,637 | 21.43K (9,103) | 9.73K (21,299) | 286574 | 2020-10-29 | SAMN12123816 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Xenotilapia nigrolabiata (2) | GCA_015106035.1_IZC7.scf | 688,421,214 | 72,111 | 17.13K (10,289) | 8.74K (21,875) | 286602 | 2020-10-29 | SAMN12123802 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Xenotilapia nigrolabiata (2) | GCA_015106095.1_IXF4.scf | 707,019,787 | 68,093 | 18.98K (9,574) | 10.13K (19,452) | 286602 | 2020-10-29 | SAMN12123789 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Perissodus multidentatus (2) | GCA_015106055.1_IZA9.scf | 705,054,391 | 56,957 | 21.19K (9,372) | 9.69K (21,616) | 452216 | 2020-10-29 | SAMN12123799 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Perissodus multidentatus (2) | GCA_015106075.1_IZA8.scf | 716,640,519 | 49,509 | 25.95K (7,752) | 12.30K (16,894) | 452216 | 2020-10-29 | SAMN12123798 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Petrochromis famula (2) | GCA_015106115.1_IYA6.scf | 656,853,181 | 73,628 | 14.34K (13,074) | 6.14K (32,821) | 244513 | 2020-10-29 | SAMN12123792 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Petrochromis famula (2) | GCA_015108095.1_IYA7.scf | 684,081,926 | 60,142 | 20.17K (9,477) | 6.85K (30,230) | 244513 | 2020-10-29 | SAMN12123793 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Hemibates stenosoma (2) | GCA_015106155.1_IXC3.scf | 682,880,642 | 80,217 | 12.79K (15,306) | 6.89K (30,197) | 286578 | 2020-10-29 | SAMN12123788 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Hemibates stenosoma (2) | GCA_015106175.1_IXC2.scf | 693,607,676 | 74,504 | 14.50K (13,648) | 7.41K (28,241) | 286578 | 2020-10-29 | SAMN12123787 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Xenotilapia caudafasciata (2) | GCA_015106215.1_IXC1.scf | 686,448,967 | 68,914 | 17.28K (10,555) | 8.88K (22,129) | 240484 | 2020-10-29 | SAMN12123786 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Xenotilapia caudafasciata (2) | GCA_015106235.1_IXB9.scf | 666,649,636 | 74,394 | 15.12K (12,034) | 5.68K (34,986) | 240484 | 2020-10-29 | SAMN12123785 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Greenwoodochromis bellcrossi | GCA_015106255.1_IXB5.scf | 715,592,818 | 50,634 | 26.74K (7,226) | 11.85K (17,541) | 286576 | 2020-10-29 | SAMN12123782 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Trematocara unimaculatum (2) | GCA_015106295.1_IXA6.scf | 705,420,268 | 94,913 | 13.60K (13,464) | 7.24K (27,231) | 158782 | 2020-10-29 | SAMN12123781 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Trematocara unimaculatum (2) | GCA_015106355.1_IXA3.scf | 693,913,544 | 104,357 | 11.13K (16,849) | 6.27K (31,789) | 158782 | 2020-10-29 | SAMN12123778 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Perissodus eccentricus (2) | GCA_015106315.1_IXA4.scf | 703,326,511 | 54,768 | 22.83K (8,567) | 9.00K (23,171) | 409979 | 2020-10-29 | SAMN12123779 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Perissodus eccentricus (2) | GCA_015107955.1_IZB2.scf | 717,642,070 | 51,690 | 25.00K (7,930) | 11.30K (18,652) | 409979 | 2020-10-29 | SAMN12123800 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Bathybates minor (2) | GCA_015106335.1_IXA5.scf | 689,806,508 | 78,321 | 13.34K (14,671) | 7.46K (27,777) | 293467 | 2020-10-29 | SAMN12123780 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Bathybates minor (2) | GCA_015107595.1_JBG3.scf | 692,255,707 | 75,350 | 14.11K (13,933) | 7.43K (28,442) | 293467 | 2020-10-29 | SAMN12123829 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Cunningtonia longiventralis (2) | GCA_015106375.1_IWD8.scf | 667,629,517 | 80,224 | 13.99K (12,885) | 5.38K (37,217) | 27739 | 2020-10-29 | SAMN12123777 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Cunningtonia longiventralis (2) | GCA_015106395.1_IWD7.scf | 665,745,250 | 84,107 | 12.86K (13,909) | 6.58K (29,870) | 27739 | 2020-10-29 | SAMN12123776 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Lamprologus signatus (2) | GCA_015106425.1_IWD5.scf | 679,415,488 | 76,960 | 14.63K (12,449) | 6.40K (31,442) | 420105 | 2020-10-29 | SAMN12123774 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Lamprologus signatus (2) | GCA_015106455.1_IWD6.scf | 706,389,436 | 67,102 | 18.69K (9,643) | 9.06K (22,021) | 420105 | 2020-10-29 | SAMN12123775 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Petrochromis horii (2) | GCA_015106475.1_IWB5.scf | 687,823,504 | 65,690 | 17.59K (10,966) | 8.98K (22,646) | 2591258 | 2020-10-29 | SAMN12123770 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Petrochromis horii (2) | GCA_015106495.1_IWB6.scf | 702,242,957 | 57,473 | 21.78K (8,938) | 9.45K (21,838) | 2591258 | 2020-10-29 | SAMN12123771 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Haplochromis vanheusdeni | GCA_015106555.1_JWG3.scf | 688,696,421 | 81,276 | 13.13K (15,070) | 7.13K (29,163) | 2527912 | 2020-10-29 | SAMN12123916 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Tropheus annectens (2) | GCA_015106575.1_JWG4.scf | 711,870,347 | 54,797 | 23.94K (8,131) | 12.42K (16,359) | 8146 | 2020-10-29 | SAMN12123917 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Tropheus annectens (2) | GCA_015108435.1_JWG5.scf | 687,938,452 | 59,295 | 20.72K (9,180) | 7.16K (28,686) | 8146 | 2020-10-29 | SAMN12123918 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Thoracochromis brauschi | GCA_015106615.1_JWF8.scf | 709,113,638 | 62,130 | 19.52K (10,115) | 10.65K (19,485) | 227845 | 2020-10-29 | SAMN12123912 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Sargochromis carlottae | GCA_015106635.1_JWF4.scf | 706,231,868 | 63,952 | 18.93K (10,347) | 10.75K (18,944) | 311502 | 2020-10-29 | SAMN12123908 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Coptodon bakossiorum | GCA_015106655.1_JWE5.scf | 729,867,591 | 50,658 | 29.14K (6,861) | 10.35K (20,650) | 870159 | 2020-10-29 | SAMN12123900 | PRJNA550295 | "CICHLID~X" | fish | ||
| spotted tilapia | Pelmatolapia mariae | GCA_015106675.1_JWF2.scf | 742,559,019 | 54,897 | 27.74K (7,152) | 13.27K (15,895) | 158779 | 2020-10-29 | SAMN12123906 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Serranochromis macrocephalus | GCA_015106695.1_JWF5.scf | 720,263,168 | 61,443 | 20.25K (9,910) | 11.62K (17,903) | 311509 | 2020-10-29 | SAMN12123909 | PRJNA550295 | "CICHLID~X" | fish | ||
| banded acara | Bujurquina vittata | GCA_015106715.1_JWD8.scf | 685,844,181 | 44,515 | 28.16K (7,093) | 9.05K (23,008) | 242822 | 2020-10-29 | SAMN12123894 | PRJNA550295 | "CICHLID~X" | fish | ||
| Pollen's cichlid | Paratilapia polleni | GCA_015106735.1_JWD5.scf | 814,015,474 | 64,452 | 21.26K (10,869) | 9.48K (25,704) | VU | 80772 | 2020-10-29 | SAMN12123892 | PRJNA550295 | "CICHLID~X" | fish | |
| bony fishes | Etia nguti | GCA_015106755.1_JWD3.scf | 737,182,303 | 46,212 | 33.46K (6,051) | 12.66K (16,900) | 302982 | 2020-10-29 | SAMN12123890 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Etroplus canarensis | GCA_015106775.1_JWD4.scf | 975,368,651 | 91,474 | 18.34K (14,839) | 10.52K (26,414) | EN | 302778 | 2020-10-29 | SAMN12123891 | PRJNA550295 | "CICHLID~X" | fish | |
| bony fishes | Paracyprichromis sp. 'tembwe' AB-2019 (2) | GCA_015106795.1_JWD2.scf | 708,381,076 | 54,764 | 22.84K (8,657) | 11.96K (17,165) | 2591292 | 2020-10-29 | SAMN12123889 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Paracyprichromis sp. 'tembwe' AB-2019 (2) | GCA_015108655.1_JWD1.scf | 710,755,336 | 53,215 | 23.82K (8,210) | 12.52K (16,342) | 2591292 | 2020-10-29 | SAMN12123888 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Xenotilapia ochrogenys (2) | GCA_015106815.1_JVI5.scf | 697,709,730 | 79,923 | 14.76K (12,431) | 7.85K (25,497) | 27765 | 2020-10-29 | SAMN12123875 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Xenotilapia ochrogenys (2) | GCA_015106855.1_JVH4.scf | 701,404,099 | 78,807 | 14.89K (12,417) | 7.89K (25,525) | 27765 | 2020-10-29 | SAMN12123874 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Lamprologus meleagris (2) | GCA_015106835.1_JWA8.scf | 646,622,601 | 111,736 | 8.08K (23,345) | 4.72K (42,576) | 329913 | 2020-10-29 | SAMN12123884 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Lamprologus meleagris (2) | GCA_015108715.1_JWA9.scf | 688,779,800 | 95,078 | 10.96K (17,576) | 6.31K (32,416) | 329913 | 2020-10-29 | SAMN12123885 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Lestradea stappersii (2) | GCA_015106875.1_JVH3.scf | 649,821,599 | 86,295 | 12.13K (14,676) | 5.47K (35,589) | 240473 | 2020-10-29 | SAMN12123873 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Lestradea stappersii (2) | GCA_015106895.1_JVH2.scf | 680,245,229 | 75,653 | 15.77K (11,258) | 7.52K (25,968) | 240473 | 2020-10-29 | SAMN12123872 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Cyprichromis microlepidotus (2) | GCA_015106915.1_JVF2.scf | 680,369,180 | 65,115 | 17.40K (11,014) | 7.75K (26,323) | 309879 | 2020-10-29 | SAMN12123871 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Cyprichromis microlepidotus (2) | GCA_015106935.1_JVE1.scf | 664,892,034 | 69,107 | 15.48K (12,289) | 6.81K (29,569) | 309879 | 2020-10-29 | SAMN12123870 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus mondabu (2) | GCA_015106975.1_JVB4.scf | 708,906,637 | 66,349 | 19.66K (9,419) | 9.23K (21,617) | 272723 | 2020-10-29 | SAMN12123866 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus mondabu (2) | GCA_015108875.1_JVB8.scf | 705,730,298 | 67,588 | 19.18K (9,512) | 9.44K (21,014) | 272723 | 2020-10-29 | SAMN12123867 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus furcifer (2) | GCA_015107075.1_JEI8.scf | 712,748,803 | 67,552 | 19.01K (9,595) | 10.65K (18,769) | 34805 | 2020-10-29 | SAMN12123857 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus furcifer (2) | GCA_015108955.1_JEI6.scf | 719,344,519 | 62,892 | 21.25K (8,576) | 11.11K (18,214) | 34805 | 2020-10-29 | SAMN12123856 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus buescheri (2) | GCA_015107095.1_JEI5.scf | 688,595,876 | 78,610 | 14.35K (12,810) | 8.30K (24,091) | 329916 | 2020-10-29 | SAMN12123855 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus buescheri (2) | GCA_015108995.1_JEI4.scf | 687,849,017 | 80,416 | 13.94K (13,254) | 7.67K (26,180) | 329916 | 2020-10-29 | SAMN12123854 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Triglachromis otostigma (2) | GCA_015107115.1_JEG5.scf | 694,207,251 | 66,640 | 17.33K (11,390) | 7.63K (27,261) | 34813 | 2020-10-29 | SAMN12123852 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Triglachromis otostigma (2) | GCA_015108975.1_JEG6.scf | 685,279,642 | 73,137 | 15.11K (12,863) | 7.61K (27,102) | 34813 | 2020-10-29 | SAMN12123853 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus sp. 'ventralis stripe' AB-2019 (2) | GCA_015107135.1_JED4.scf | 673,201,548 | 74,656 | 15.72K (11,345) | 5.92K (33,654) | 2591288 | 2020-10-29 | SAMN12123850 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus sp. 'ventralis stripe' AB-2019 (2) | GCA_015107155.1_JED5.scf | 698,729,602 | 67,745 | 19.20K (9,195) | 9.15K (21,167) | 2591288 | 2020-10-29 | SAMN12123851 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Cyprichromis coloratus (2) | GCA_015107215.1_JEC7.scf | 702,549,169 | 53,570 | 23.40K (8,360) | 11.09K (18,358) | 559343 | 2020-10-29 | SAMN12123848 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Cyprichromis coloratus (2) | GCA_015107235.1_JED2.scf | 697,932,415 | 53,652 | 23.08K (8,413) | 10.39K (19,684) | 559343 | 2020-10-29 | SAMN12123849 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Plecodus paradoxus (2) | GCA_015107295.1_JDI4.scf | 706,454,054 | 53,948 | 23.41K (8,393) | 9.01K (23,556) | 452217 | 2020-10-29 | SAMN12123845 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Plecodus paradoxus (2) | GCA_015111055.1_LEC7.scf | 697,134,177 | 52,567 | 23.34K (8,365) | 8.47K (24,737) | 452217 | 2020-10-29 | SAMN12124061 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Lamprologus laparogramma (2) | GCA_015107315.1_JDI2.scf | 707,546,407 | 69,084 | 17.90K (10,314) | 8.72K (23,403) | 420106 | 2020-10-29 | SAMN12123844 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Lamprologus laparogramma (2) | GCA_015107335.1_JDI1.scf | 674,016,084 | 81,870 | 13.42K (13,580) | 5.75K (34,902) | 420106 | 2020-10-29 | SAMN12123843 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus meeli (2) | GCA_015107355.1_JDF4.scf | 705,984,974 | 68,838 | 18.07K (10,195) | 9.05K (22,162) | 56727 | 2020-10-29 | SAMN12123840 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus meeli (2) | GCA_015107425.1_JDF3.scf | 678,320,556 | 81,274 | 13.59K (13,371) | 6.69K (30,063) | 56727 | 2020-10-29 | SAMN12123839 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Lamprologus sp. 'ornatipinnis zambia' AB-2019 (2) | GCA_015107375.1_JDF5.scf | 688,859,277 | 77,224 | 14.89K (12,100) | 8.14K (24,214) | 2591278 | 2020-10-29 | SAMN12123841 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Lamprologus sp. 'ornatipinnis zambia' AB-2019 (2) | GCA_015107395.1_JDG4.scf | 664,904,344 | 86,184 | 12.45K (14,318) | 6.30K (30,870) | 2591278 | 2020-10-29 | SAMN12123842 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Bathybates hornii (2) | GCA_015107475.1_JDE3.scf | 703,048,774 | 71,991 | 15.21K (13,034) | 6.99K (30,594) | 293471 | 2020-10-29 | SAMN12123835 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Bathybates hornii (2) | GCA_015107495.1_JDE4.scf | 723,040,783 | 69,102 | 16.64K (12,166) | 9.14K (23,568) | 293471 | 2020-10-29 | SAMN12123836 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Grammatotria lemairii (2) | GCA_015107505.1_JDD7.scf | 711,001,987 | 56,877 | 24.24K (7,422) | 11.88K (16,443) | 143506 | 2020-10-29 | SAMN12123833 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Grammatotria lemairii (2) | GCA_015107535.1_JDD8.scf | 674,949,586 | 71,173 | 16.46K (10,723) | 8.38K (22,732) | 143506 | 2020-10-29 | SAMN12123834 | PRJNA550295 | "CICHLID~X" | fish | ||
| giant cichlid | Boulengerochromis microlepis (2) | GCA_015107555.1_JCF2.scf | 728,877,443 | 51,548 | 26.38K (7,708) | 11.60K (18,235) | 32488 | 2020-10-29 | SAMN12123832 | PRJNA550295 | "CICHLID~X" | fish | ||
| giant cichlid | Boulengerochromis microlepis (2) | GCA_015107755.1_JAE7.scf | 726,523,879 | 52,632 | 25.55K (7,947) | 10.86K (19,331) | 32488 | 2020-10-29 | SAMN12123815 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Tylochromis polylepis (2) | GCA_015107675.1_JAH5.scf | 739,120,352 | 67,353 | 18.23K (11,556) | 7.86K (28,293) | 32513 | 2020-10-29 | SAMN12123821 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Tylochromis polylepis (2) | GCA_015107715.1_JAG2.scf | 744,281,720 | 65,801 | 18.82K (11,247) | 8.53K (26,143) | 32513 | 2020-10-29 | SAMN12123820 | PRJNA550295 | "CICHLID~X" | fish | ||
| Tanganyika clown | Eretmodus cyanostictus (2) | GCA_015107855.1_IZI3.scf | 705,087,176 | 59,208 | 20.63K (9,494) | 11.24K (18,122) | 52954 | 2020-10-29 | SAMN12123807 | PRJNA550295 | "CICHLID~X" | fish | ||
| Tanganyika clown | Eretmodus cyanostictus (2) | GCA_015107895.1_IZH7.scf | 720,832,011 | 52,837 | 24.15K (8,162) | 13.35K (15,655) | 52954 | 2020-10-29 | SAMN12123806 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Greenwoodochromis christyi (2) | GCA_015107915.1_IZF1.scf | 690,713,693 | 59,448 | 20.52K (9,260) | 9.16K (22,050) | 299337 | 2020-10-29 | SAMN12123805 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Greenwoodochromis christyi (2) | GCA_015107935.1_IZE4.scf | 708,140,562 | 54,622 | 23.65K (8,273) | 10.26K (20,205) | 299337 | 2020-10-29 | SAMN12123804 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Julidochromis marlieri (2) | GCA_015108065.1_JXB5.scf | 706,627,396 | 65,347 | 20.09K (8,979) | 9.81K (20,223) | 32499 | 2020-10-29 | SAMN12123934 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Julidochromis marlieri (2) | GCA_015110495.1_JXC1.scf | 703,735,116 | 66,035 | 19.76K (9,028) | 9.21K (21,456) | 32499 | 2020-10-29 | SAMN12123935 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Telmatochromis brichardi (2) | GCA_015108115.1_JXA4.scf | 685,828,322 | 72,087 | 16.86K (10,591) | 6.99K (28,619) | 449328 | 2020-10-29 | SAMN12123933 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Telmatochromis brichardi (2) | GCA_015108855.1_JVI9.scf | 687,890,300 | 71,251 | 17.22K (10,435) | 7.29K (27,370) | 449328 | 2020-10-29 | SAMN12123876 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus pectoralis (2) | GCA_015108135.1_JWI6.scf | 712,959,601 | 68,245 | 18.83K (9,706) | 8.47K (24,576) | 449323 | 2020-10-29 | SAMN12123932 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus pectoralis (2) | GCA_015108755.1_JWA7.scf | 713,762,887 | 64,850 | 20.22K (9,001) | 9.07K (22,511) | 449323 | 2020-10-29 | SAMN12123883 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus longicaudatus (2) | GCA_015108155.1_JWI3.scf | 712,970,117 | 62,543 | 21.26K (8,455) | 9.44K (21,479) | 449320 | 2020-10-29 | SAMN12123929 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus longicaudatus (2) | GCA_015108235.1_JWI2.scf | 701,086,066 | 67,890 | 18.93K (9,552) | 7.71K (26,486) | 449320 | 2020-10-29 | SAMN12123928 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Pelvicachromis taeniatus (2) | GCA_015108175.1_JWI4.scf | 693,289,851 | 51,222 | 26.67K (6,923) | 10.38K (19,246) | 219366 | 2020-10-29 | SAMN12123930 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Pelvicachromis taeniatus (2) | GCA_015108195.1_JWI5.scf | 683,755,683 | 54,277 | 24.07K (7,602) | 8.52K (23,610) | 219366 | 2020-10-29 | SAMN12123931 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus leleupi | GCA_015108215.1_JWH9.scf | 711,353,858 | 63,428 | 20.70K (8,799) | 8.81K (23,573) | 40189 | 2020-10-29 | SAMN12123927 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus olivaceous (2) | GCA_015108255.1_JWH6.scf | 711,189,255 | 65,548 | 20.08K (8,977) | 9.03K (22,460) | 184150 | 2020-10-29 | SAMN12123926 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus olivaceous (2) | GCA_015108295.1_JWH5.scf | 702,510,496 | 67,278 | 19.12K (9,447) | 7.83K (25,992) | 184150 | 2020-10-29 | SAMN12123925 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus gracilis (2) | GCA_015108275.1_JWH2.scf | 717,378,789 | 61,730 | 21.86K (8,247) | 10.31K (19,699) | 184147 | 2020-10-29 | SAMN12123922 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus gracilis (2) | GCA_015108355.1_JWH1.scf | 706,588,286 | 64,015 | 20.90K (8,532) | 9.00K (22,282) | 184147 | 2020-10-29 | SAMN12123921 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus marunguensis (2) | GCA_015108315.1_JWH3.scf | 707,163,336 | 66,234 | 19.53K (9,193) | 8.32K (24,563) | 184149 | 2020-10-29 | SAMN12123923 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus marunguensis (2) | GCA_015108335.1_JWH4.scf | 705,262,498 | 65,345 | 20.19K (8,800) | 8.65K (23,275) | 184149 | 2020-10-29 | SAMN12123924 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus helianthus (2) | GCA_015108375.1_JWG8.scf | 652,377,671 | 84,845 | 12.38K (14,152) | 5.57K (34,963) | 184148 | 2020-10-29 | SAMN12123919 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus helianthus (2) | GCA_015108395.1_JWG9.scf | 714,502,186 | 62,695 | 21.30K (8,433) | 10.62K (18,724) | 184148 | 2020-10-29 | SAMN12123920 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Tilapia sparmanii | GCA_015108415.1_JWF7.scf | 729,330,520 | 51,706 | 28.90K (6,863) | 12.81K (16,160) | 2591260 | 2020-10-29 | SAMN12123911 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Lamprologus tigripictilis | GCA_015108455.1_JWF6.scf | 710,946,870 | 71,624 | 17.06K (10,972) | 8.75K (23,363) | VU | 795477 | 2020-10-29 | SAMN12123910 | PRJNA550295 | "CICHLID~X" | fish | |
| bony fishes | Pharyngochromis acuticeps | GCA_015108475.1_JWF3.scf | 703,218,156 | 62,339 | 19.35K (10,103) | 9.65K (21,402) | 311497 | 2020-10-29 | SAMN12123907 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Heterochromis multidens | GCA_015108495.1_JWF1.scf | 833,341,774 | 77,704 | 17.76K (13,191) | 8.67K (28,191) | 73563 | 2020-10-29 | SAMN12123905 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Hemichromis elongatus | GCA_015108515.1_JWE9.scf | 694,332,140 | 37,326 | 37.08K (5,329) | 12.75K (16,161) | 293472 | 2020-10-29 | SAMN12123904 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Steatocranus sp. 'ultraslender' AB-2019 | GCA_015108535.1_JWE8.scf | 712,550,673 | 72,014 | 15.93K (12,907) | 8.86K (24,194) | 2591301 | 2020-10-29 | SAMN12123903 | PRJNA550295 | "CICHLID~X" | fish | ||
| redbreast tilapia | Coptodon rendalli | GCA_015108555.1_JWE6.scf | 734,510,853 | 51,376 | 29.58K (6,812) | 12.32K (17,055) | 8129 | 2020-10-29 | SAMN12123901 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Heterotilapia buettikoferi | GCA_015108575.1_JWE3.scf | 720,630,469 | 59,585 | 22.94K (8,697) | 8.91K (23,938) | 2591251 | 2020-10-29 | SAMN12123898 | PRJNA550295 | "CICHLID~X" | fish | ||
| arrow cichlid | Amphilophus zaliosus | GCA_015108585.1_JWE1.scf | 691,926,659 | 103,854 | 9.62K (21,708) | 4.45K (49,527) | CR | 281253 | 2020-10-29 | SAMN12123896 | PRJNA550295 | "CICHLID~X" | fish | |
| bony fishes | Australoheros scitulus | GCA_015108615.1_JWE2.scf | 709,570,869 | 97,693 | 10.90K (19,476) | 4.62K (48,202) | 329336 | 2020-10-29 | SAMN12123897 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Andinoacara biseriatus | GCA_015108635.1_JWD7.scf | 682,785,894 | 46,099 | 25.64K (7,959) | 6.41K (32,743) | VU | 449250 | 2020-10-29 | SAMN12123893 | PRJNA550295 | "CICHLID~X" | fish | |
| bony fishes | Telmatochromis sp. 'longola' AB-2019 (2) | GCA_015108675.1_JWC9.scf | 713,504,275 | 60,747 | 22.21K (8,044) | 10.34K (19,290) | 2591304 | 2020-10-29 | SAMN12123887 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Telmatochromis sp. 'longola' AB-2019 (2) | GCA_015108735.1_JWC8.scf | 686,758,878 | 81,131 | 14.07K (12,902) | 7.33K (27,315) | 2591304 | 2020-10-29 | SAMN12123886 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus variostigma (2) | GCA_015108695.1_JWA6.scf | 720,958,981 | 65,227 | 19.94K (9,254) | 10.89K (18,579) | 329914 | 2020-10-29 | SAMN12123882 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus variostigma (2) | GCA_015108775.1_JWA5.scf | 715,522,157 | 66,482 | 19.31K (9,655) | 10.20K (19,819) | 329914 | 2020-10-29 | SAMN12123881 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Lamprologus sp. 'ornatipinnis congo' AB-2019 (2) | GCA_015108795.1_JWA4.scf | 685,735,059 | 80,088 | 13.82K (13,158) | 7.02K (28,974) | 2591277 | 2020-10-29 | SAMN12123880 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Lamprologus sp. 'ornatipinnis congo' AB-2019 (2) | GCA_015108835.1_JWA3.scf | 690,966,169 | 78,503 | 14.37K (12,806) | 7.38K (27,595) | 2591277 | 2020-10-29 | SAMN12123879 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Telmatochromis sp. 'dhonti north' AB-2019 (2) | GCA_015108915.1_JUD5.scf | 708,854,752 | 67,572 | 19.39K (9,272) | 8.75K (22,811) | 2591302 | 2020-10-29 | SAMN12123863 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Telmatochromis sp. 'dhonti north' AB-2019 (2) | GCA_015108935.1_JUD4.scf | 664,251,327 | 81,208 | 13.88K (12,603) | 6.42K (29,975) | 2591302 | 2020-10-29 | SAMN12123862 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus chitamwebwai (2) | GCA_015109035.1_KHA7.scf | 692,038,436 | 72,756 | 16.88K (10,495) | 8.29K (24,063) | 2591255 | 2020-10-29 | SAMN12124009 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus chitamwebwai (2) | GCA_015109055.1_KHA9.scf | 668,762,133 | 81,689 | 13.62K (12,993) | 6.32K (31,359) | 2591255 | 2020-10-29 | SAMN12124010 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus tretocephalus (2) | GCA_015109115.1_KFH4.scf | 693,070,553 | 71,387 | 17.38K (10,462) | 6.39K (32,421) | 40190 | 2020-10-29 | SAMN12124005 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus tretocephalus (2) | GCA_015109125.1_KFH5.scf | 694,868,712 | 69,809 | 17.71K (10,135) | 6.68K (30,886) | 40190 | 2020-10-29 | SAMN12124006 | PRJNA550295 | "CICHLID~X" | fish | ||
| dwarf Tanganyikan cichlid | Tropheus duboisi (2) | GCA_015109155.1_KHA5.scf | 694,542,091 | 59,451 | 20.78K (9,274) | 7.92K (26,194) | VU | 8148 | 2020-10-29 | SAMN12124008 | PRJNA550295 | "CICHLID~X" | fish | |
| dwarf Tanganyikan cichlid | Tropheus duboisi (2) | GCA_015109175.1_KHA4.scf | 679,214,037 | 63,645 | 18.48K (10,345) | 6.03K (34,235) | VU | 8148 | 2020-10-29 | SAMN12124007 | PRJNA550295 | "CICHLID~X" | fish | |
| convict julie | Julidochromis regani (2) | GCA_015109195.1_KFF4.scf | 685,839,716 | 69,299 | 17.95K (9,811) | 6.41K (31,648) | 8125 | 2020-10-29 | SAMN12124004 | PRJNA550295 | "CICHLID~X" | fish | ||
| convict julie | Julidochromis regani (2) | GCA_015112075.1_KHE6.scf | 694,958,740 | 72,149 | 17.16K (10,442) | 8.53K (23,386) | 8125 | 2020-10-29 | SAMN12124013 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus walteri (2) | GCA_015109215.1_KFD4.scf | 695,825,513 | 67,344 | 19.23K (9,081) | 8.89K (22,252) | 863668 | 2020-10-29 | SAMN12124001 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus walteri (2) | GCA_015109235.1_KFD2.scf | 676,536,958 | 69,877 | 18.03K (9,597) | 6.12K (32,243) | 863668 | 2020-10-29 | SAMN12124000 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Cyprichromis sp. 'dwarf jumbo' AB-2019 (2) | GCA_015109275.1_KFA9.scf | 704,186,464 | 52,907 | 23.90K (8,106) | 10.74K (19,242) | 2591269 | 2020-10-29 | SAMN12123999 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Cyprichromis sp. 'dwarf jumbo' AB-2019 (2) | GCA_015109335.1_KFA7.scf | 706,554,340 | 49,724 | 25.76K (7,478) | 11.46K (17,961) | 2591269 | 2020-10-29 | SAMN12123998 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Tropheus sp. 'lukuga' AB-2019 (2) | GCA_015109315.1_KEF2.scf | 708,482,422 | 51,996 | 25.81K (7,517) | 10.59K (19,416) | 2591308 | 2020-10-29 | SAMN12123995 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Tropheus sp. 'lukuga' AB-2019 (2) | GCA_015109395.1_KEF3.scf | 692,500,893 | 67,432 | 17.38K (11,039) | 8.82K (23,176) | 2591308 | 2020-10-29 | SAMN12123996 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Chalinochromis sp. 'ndobhoi' AB-2019 (2) | GCA_015109345.1_KEF1.scf | 686,954,032 | 78,243 | 15.11K (11,989) | 6.22K (32,892) | 2591267 | 2020-10-29 | SAMN12123994 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Chalinochromis sp. 'ndobhoi' AB-2019 (2) | GCA_015109415.1_KEE9.scf | 680,913,016 | 79,207 | 14.79K (12,309) | 5.76K (35,416) | 2591267 | 2020-10-29 | SAMN12123993 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus longior (2) | GCA_015109375.1_KEH3.scf | 720,965,869 | 61,261 | 22.36K (8,178) | 11.00K (18,408) | 34806 | 2020-10-29 | SAMN12123997 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus longior (2) | GCA_015111095.1_LEE1.scf | 694,784,411 | 76,551 | 15.54K (11,766) | 8.06K (25,120) | 34806 | 2020-10-29 | SAMN12124062 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Lepidiolamprologus profundicola (2) | GCA_015109435.1_KEB8.scf | 703,981,823 | 67,027 | 18.87K (9,603) | 8.36K (24,375) | 272719 | 2020-10-29 | SAMN12123988 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Lepidiolamprologus profundicola (2) | GCA_015109915.1_KAD2.scf | 705,164,024 | 66,486 | 18.97K (9,598) | 8.46K (24,208) | 272719 | 2020-10-29 | SAMN12123966 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus similis (2) | GCA_015109475.1_KEC1.scf | 708,721,287 | 70,003 | 18.01K (10,100) | 8.18K (24,743) | 278786 | 2020-10-29 | SAMN12123989 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus similis (2) | GCA_015109495.1_KEC2.scf | 694,522,667 | 75,333 | 15.93K (11,383) | 6.38K (32,009) | 278786 | 2020-10-29 | SAMN12123990 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Petrochromis sp. 'kazumbae' AB-2019 (2) | GCA_015109515.1_KEB4.scf | 697,945,754 | 53,363 | 24.63K (7,744) | 8.82K (23,259) | 2591294 | 2020-10-29 | SAMN12123987 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Petrochromis sp. 'kazumbae' AB-2019 (2) | GCA_015109535.1_KEA4.scf | 693,067,596 | 55,958 | 22.95K (8,323) | 7.68K (26,798) | 2591294 | 2020-10-29 | SAMN12123986 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Cyphotilapia sp. '5-bar frontosa' AB-2019 (2) | GCA_015109555.1_KDG2.scf | 714,078,544 | 53,727 | 24.68K (7,944) | 11.68K (17,757) | 2591268 | 2020-10-29 | SAMN12123985 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Cyphotilapia sp. '5-bar frontosa' AB-2019 (2) | GCA_015109715.1_KAG3.scf | 717,924,045 | 50,732 | 27.01K (7,226) | 11.82K (17,668) | 2591268 | 2020-10-29 | SAMN12123974 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Orthochromis mazimeroensis | GCA_015109575.1_KDC6.scf | 683,263,474 | 70,296 | 15.63K (12,229) | 7.97K (25,787) | EN | 167849 | 2020-10-29 | SAMN12123984 | PRJNA550295 | "CICHLID~X" | fish | |
| bony fishes | Neolamprologus sp. 'brevis magara' AB-2019 (2) | GCA_015109595.1_KCI7.scf | 687,519,472 | 74,468 | 16.19K (10,891) | 7.48K (26,610) | 2591280 | 2020-10-29 | SAMN12123983 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus sp. 'brevis magara' AB-2019 (2) | GCA_015109655.1_KCI6.scf | 705,096,510 | 67,072 | 19.64K (8,978) | 9.86K (19,855) | 2591280 | 2020-10-29 | SAMN12123982 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Lamprologus speciosus (2) | GCA_015109635.1_KCG3.scf | 714,530,206 | 69,974 | 17.60K (10,785) | 9.75K (21,067) | 329915 | 2020-10-29 | SAMN12123981 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Lamprologus speciosus (2) | GCA_015109675.1_KCG2.scf | 715,005,986 | 69,004 | 17.99K (10,374) | 9.40K (22,057) | 329915 | 2020-10-29 | SAMN12123980 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus boulengeri (2) | GCA_015109695.1_KCE5.scf | 684,918,977 | 79,213 | 14.25K (12,842) | 7.18K (28,161) | 329917 | 2020-10-29 | SAMN12123977 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus boulengeri (2) | GCA_015111995.1_KYB9.scf | 676,917,367 | 79,702 | 13.95K (13,102) | 5.58K (36,998) | 329917 | 2020-10-29 | SAMN12124018 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus ventralis (2) | GCA_015109735.1_KAG8.scf | 711,835,635 | 65,530 | 19.91K (9,241) | 10.29K (19,324) | 449327 | 2020-10-29 | SAMN12123976 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus ventralis (2) | GCA_015109755.1_KAG7.scf | 709,369,790 | 64,967 | 19.83K (9,156) | 9.85K (20,329) | 449327 | 2020-10-29 | SAMN12123975 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Xenotilapia longispinis (2) | GCA_015109775.1_KAF6.scf | 715,411,025 | 68,387 | 19.05K (9,652) | 9.97K (20,285) | 240485 | 2020-10-29 | SAMN12123973 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Xenotilapia longispinis (2) | GCA_015109815.1_KAF5.scf | 703,271,709 | 73,878 | 16.50K (11,158) | 7.92K (25,763) | 240485 | 2020-10-29 | SAMN12123972 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Cardiopharynx schoutedeni (2) | GCA_015109795.1_KAF2.scf | 702,721,173 | 74,303 | 17.02K (10,561) | 9.49K (20,589) | 32492 | 2020-10-29 | SAMN12123969 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Cardiopharynx schoutedeni (2) | GCA_015109895.1_KAF1.scf | 675,974,986 | 75,349 | 15.87K (11,150) | 5.79K (34,846) | 32492 | 2020-10-29 | SAMN12123968 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Callochromis melanostigma (2) | GCA_015109835.1_KAF4.scf | 689,151,099 | 81,714 | 15.06K (11,926) | 6.10K (33,061) | 240489 | 2020-10-29 | SAMN12123971 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Callochromis melanostigma (2) | GCA_015109845.1_KAF3.scf | 685,972,472 | 81,489 | 15.14K (11,814) | 6.08K (32,972) | 240489 | 2020-10-29 | SAMN12123970 | PRJNA550295 | "CICHLID~X" | fish | ||
| bluelip haplo | Astatoreochromis straeleni | GCA_015109875.1_KAE8.scf | 689,581,009 | 71,781 | 15.57K (12,611) | 7.93K (25,969) | 64535 | 2020-10-29 | SAMN12123967 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Lamprologus ornatipinnis (2) | GCA_015109935.1_JZF3.scf | 704,008,040 | 65,972 | 19.26K (9,276) | 9.15K (21,737) | 420112 | 2020-10-29 | SAMN12123964 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Lamprologus ornatipinnis (2) | GCA_015109955.1_JZF4.scf | 697,224,635 | 72,468 | 16.98K (10,538) | 8.55K (23,142) | 420112 | 2020-10-29 | SAMN12123965 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Xenotilapia ornatipinnis (2) | GCA_015109995.1_JZE8.scf | 686,597,603 | 71,506 | 16.99K (10,611) | 6.75K (29,712) | 143550 | 2020-10-29 | SAMN12123961 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Xenotilapia ornatipinnis (2) | GCA_015110015.1_JZE6.scf | 696,016,223 | 68,484 | 18.38K (9,839) | 8.12K (24,786) | 143550 | 2020-10-29 | SAMN12123960 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Callochromis pleurospilus (2) | GCA_015110035.1_JZE4.scf | 709,188,225 | 78,222 | 16.57K (11,043) | 8.60K (22,964) | 27735 | 2020-10-29 | SAMN12123959 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Callochromis pleurospilus (2) | GCA_015110055.1_JZE2.scf | 686,699,189 | 81,254 | 15.12K (11,979) | 6.53K (30,189) | 27735 | 2020-10-29 | SAMN12123958 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus toae (2) | GCA_015110075.1_JZD6.scf | 715,708,537 | 63,442 | 21.12K (8,621) | 10.38K (19,455) | 34808 | 2020-10-29 | SAMN12123957 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus toae (2) | GCA_015110095.1_JZD5.scf | 709,349,448 | 65,972 | 19.75K (9,248) | 8.88K (22,895) | 34808 | 2020-10-29 | SAMN12123956 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Tropheus brichardi (2) | GCA_015110115.1_JZA3.scf | 687,430,323 | 64,480 | 18.25K (10,566) | 7.57K (26,905) | 8147 | 2020-10-29 | SAMN12123953 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Tropheus brichardi (2) | GCA_015110215.1_JYI8.scf | 694,005,721 | 58,488 | 21.39K (8,967) | 8.31K (24,728) | 8147 | 2020-10-29 | SAMN12123952 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Spathodus marlieri (2) | GCA_015110135.1_JZD3.scf | 714,771,393 | 53,605 | 23.53K (8,284) | 12.24K (16,756) | 52957 | 2020-10-29 | SAMN12123955 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Spathodus marlieri (2) | GCA_015110195.1_JZB7.scf | 683,070,751 | 66,304 | 16.99K (11,351) | 7.51K (27,366) | 52957 | 2020-10-29 | SAMN12123954 | PRJNA550295 | "CICHLID~X" | fish | ||
| spotfin goby cichlid | Tanganicodus irsacae (2) | GCA_015110155.1_JYH3.scf | 711,538,798 | 57,984 | 20.96K (9,546) | 10.93K (19,132) | 27763 | 2020-10-29 | SAMN12123950 | PRJNA550295 | "CICHLID~X" | fish | ||
| spotfin goby cichlid | Tanganicodus irsacae (2) | GCA_015110175.1_JYH7.scf | 694,492,678 | 63,208 | 18.25K (10,740) | 9.55K (21,624) | 27763 | 2020-10-29 | SAMN12123951 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Astatotilapia stappersii | GCA_015110235.1_JYD3.scf | 688,206,949 | 64,962 | 18.80K (10,164) | 9.26K (21,675) | 1237176 | 2020-10-29 | SAMN12123946 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Ophthalmotilapia sp. 'paranasuta' AB-2019 (2) | GCA_015110275.1_JYF7.scf | 708,047,076 | 70,033 | 18.31K (9,991) | 9.76K (20,340) | 2591289 | 2020-10-29 | SAMN12123948 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Ophthalmotilapia sp. 'paranasuta' AB-2019 (2) | GCA_015110295.1_JYG5.scf | 686,059,010 | 74,976 | 16.11K (11,182) | 7.04K (28,310) | 2591289 | 2020-10-29 | SAMN12123949 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Paracyprichromis brieni (2) | GCA_015110315.1_JXI4.scf | 671,390,453 | 77,751 | 13.44K (14,485) | 6.35K (32,493) | 27757 | 2020-10-29 | SAMN12123945 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Paracyprichromis brieni (2) | GCA_015110335.1_JXI2.scf | 691,560,517 | 64,033 | 17.92K (10,992) | 8.43K (24,574) | 27757 | 2020-10-29 | SAMN12123944 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Petrochromis orthognathus (2) | GCA_015110355.1_JXH4.scf | 508,607,698 | 119,695 | 5.57K (27,779) | 3.04K (55,827) | 28818 | 2020-10-29 | SAMN12123942 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Petrochromis orthognathus (2) | GCA_015110415.1_JXH5.scf | 704,346,929 | 55,862 | 23.55K (8,213) | 11.76K (17,155) | 28818 | 2020-10-29 | SAMN12123943 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Lamprologus kungweensis (2) | GCA_015110375.1_JXG8.scf | 716,095,210 | 64,072 | 19.88K (9,314) | 9.78K (20,739) | CR | 420104 | 2020-10-29 | SAMN12123940 | PRJNA550295 | "CICHLID~X" | fish | |
| bony fishes | Lamprologus kungweensis (2) | GCA_015110395.1_JXH2.scf | 705,246,034 | 72,956 | 16.51K (11,188) | 9.25K (21,606) | CR | 420104 | 2020-10-29 | SAMN12123941 | PRJNA550295 | "CICHLID~X" | fish | |
| bony fishes | Eretmodus marksmithi (2) | GCA_015110435.1_JXF4.scf | 683,346,320 | 64,767 | 17.50K (11,016) | 7.72K (26,648) | 1818572 | 2020-10-29 | SAMN12123939 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Eretmodus marksmithi (2) | GCA_015110455.1_JXE9.scf | 714,657,672 | 52,806 | 24.32K (8,147) | 12.54K (16,442) | 1818572 | 2020-10-29 | SAMN12123938 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus falcicula (2) | GCA_015110475.1_JXD7.scf | 708,783,665 | 66,799 | 18.80K (9,814) | 8.93K (22,902) | 449319 | 2020-10-29 | SAMN12123937 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus falcicula (2) | GCA_015110515.1_JXD4.scf | 705,706,531 | 65,264 | 20.18K (8,880) | 9.34K (21,302) | 449319 | 2020-10-29 | SAMN12123936 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Tropheus sp. 'brichardi kipili' AB-2019 (2) | GCA_015110675.1_LGA6.scf | 685,630,084 | 61,942 | 19.47K (9,782) | 7.01K (29,385) | 2591307 | 2020-10-29 | SAMN12124084 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Tropheus sp. 'brichardi kipili' AB-2019 (2) | GCA_015110695.1_LGA5.scf | 694,495,417 | 61,897 | 19.57K (9,753) | 9.13K (22,408) | 2591307 | 2020-10-29 | SAMN12124083 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Ophthalmotilapia boops (2) | GCA_015110715.1_LFI6.scf | 672,407,299 | 76,411 | 15.75K (11,195) | 6.12K (31,731) | 152463 | 2020-10-29 | SAMN12124082 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Ophthalmotilapia boops (2) | GCA_015110735.1_LFI4.scf | 677,592,684 | 75,108 | 16.06K (11,060) | 6.28K (31,594) | 152463 | 2020-10-29 | SAMN12124081 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Julidochromis marksmithi (2) | GCA_015110755.1_LFH1.scf | 704,237,844 | 66,143 | 19.87K (9,013) | 8.80K (22,616) | 2591252 | 2020-10-29 | SAMN12124080 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Julidochromis marksmithi (2) | GCA_015110765.1_LFG8.scf | 693,054,436 | 73,719 | 16.55K (10,809) | 8.17K (24,387) | 2591252 | 2020-10-29 | SAMN12124079 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Lepidiolamprologus kamambae (2) | GCA_015110795.1_LFF8.scf | 698,496,020 | 71,705 | 16.86K (10,859) | 7.62K (26,788) | 2591253 | 2020-10-29 | SAMN12124078 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Lepidiolamprologus kamambae (2) | GCA_015110835.1_LFF7.scf | 670,027,775 | 85,683 | 12.37K (14,929) | 5.93K (34,208) | 2591253 | 2020-10-29 | SAMN12124077 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Trematocara zebra (2) | GCA_015110815.1_LFE4.scf | 662,979,882 | 107,602 | 9.93K (17,998) | 5.47K (35,522) | 1982068 | 2020-10-29 | SAMN12124076 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Trematocara zebra (2) | GCA_015110935.1_LFC9.scf | 649,977,942 | 108,414 | 9.55K (18,595) | 5.17K (37,129) | 1982068 | 2020-10-29 | SAMN12124073 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus sp. 'cygnus' AB-2019 (2) | GCA_015110855.1_LFD2.scf | 695,502,899 | 71,271 | 17.45K (10,306) | 7.29K (28,081) | 2591282 | 2020-10-29 | SAMN12124074 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus sp. 'cygnus' AB-2019 (2) | GCA_015110875.1_LFD4.scf | 694,955,769 | 70,074 | 18.14K (9,860) | 7.43K (27,145) | 2591282 | 2020-10-29 | SAMN12124075 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus sp. 'eseki' AB-2019 (2) | GCA_015110895.1_LFB7.scf | 679,269,631 | 77,149 | 15.28K (11,869) | 6.95K (28,723) | 2591283 | 2020-10-29 | SAMN12124071 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus sp. 'eseki' AB-2019 (2) | GCA_015110915.1_LFB9.scf | 699,229,374 | 68,370 | 19.07K (9,442) | 8.22K (24,155) | 2591283 | 2020-10-29 | SAMN12124072 | PRJNA550295 | "CICHLID~X" | fish | ||
| humphead cichlid | Cyphotilapia frontosa (2) | GCA_015110975.1_LEI6.scf | 692,800,633 | 61,843 | 19.61K (9,824) | 8.26K (25,040) | 27783 | 2020-10-29 | SAMN12124067 | PRJNA550295 | "CICHLID~X" | fish | ||
| humphead cichlid | Cyphotilapia frontosa (2) | GCA_015110995.1_LEI9.scf | 687,266,949 | 65,252 | 18.01K (10,656) | 7.62K (27,112) | 27783 | 2020-10-29 | SAMN12124068 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Tropheus polli (2) | GCA_015111015.1_LEF8.scf | 710,635,257 | 52,701 | 25.24K (7,696) | 10.52K (19,546) | 8151 | 2020-10-29 | SAMN12124064 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Tropheus polli (2) | GCA_015111035.1_LEF9.scf | 708,126,722 | 53,361 | 24.68K (7,882) | 10.01K (20,572) | 8151 | 2020-10-29 | SAMN12124065 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Benthochromis sp. 'horii mahale' AB-2019 | GCA_015111075.1_LEF2.scf | 705,300,076 | 52,256 | 24.12K (8,117) | 9.44K (22,205) | 2591266 | 2020-10-29 | SAMN12124063 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Xenotilapia sp. 'spilopterus north' AB-2019 (2) | GCA_015111115.1_LEA3.scf | 689,436,327 | 82,695 | 13.63K (13,408) | 7.43K (26,967) | 2591314 | 2020-10-29 | SAMN12124059 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Xenotilapia sp. 'spilopterus north' AB-2019 (2) | GCA_015111135.1_LEA4.scf | 685,458,513 | 86,829 | 12.60K (14,661) | 7.05K (28,440) | 2591314 | 2020-10-29 | SAMN12124060 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Tropheus sp. 'mpimbwe' AB-2019 (2) | GCA_015111155.1_LDI7.scf | 680,628,748 | 67,383 | 17.02K (11,229) | 7.39K (27,701) | 2591310 | 2020-10-29 | SAMN12124058 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Tropheus sp. 'mpimbwe' AB-2019 (2) | GCA_015111195.1_LDI5.scf | 691,453,286 | 63,108 | 19.09K (10,137) | 8.55K (23,932) | 2591310 | 2020-10-29 | SAMN12124057 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus sp. 'caudopunctatus kipili' AB-2019 (2) | GCA_015111175.1_LDG3.scf | 701,808,566 | 71,355 | 17.23K (10,553) | 7.44K (27,583) | 2591281 | 2020-10-29 | SAMN12124056 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus sp. 'caudopunctatus kipili' AB-2019 (2) | GCA_015111215.1_LDG2.scf | 678,472,148 | 76,260 | 15.33K (11,648) | 5.67K (35,565) | 2591281 | 2020-10-29 | SAMN12124055 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus sp. 'furcifer ulwile' AB-2019 (2) | GCA_015111235.1_LDF4.scf | 691,267,021 | 73,489 | 16.74K (10,784) | 6.74K (29,964) | 2591285 | 2020-10-29 | SAMN12124053 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus sp. 'furcifer ulwile' AB-2019 (2) | GCA_015111255.1_LDF5.scf | 693,491,777 | 72,597 | 16.98K (10,707) | 7.01K (29,081) | 2591285 | 2020-10-29 | SAMN12124054 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Chalinochromis sp. 'bifrenatus' (2) | GCA_015111275.1_LDE1.scf | 691,054,403 | 73,342 | 16.57K (10,969) | 6.65K (30,930) | 1818570 | 2020-10-29 | SAMN12124050 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Chalinochromis sp. 'bifrenatus' (2) | GCA_015111335.1_LDD9.scf | 691,809,114 | 73,337 | 16.54K (10,957) | 6.54K (31,429) | 1818570 | 2020-10-29 | SAMN12124049 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Petrochromis sp. 'kipili brown' AB-2019 (2) | GCA_015111295.1_LDE3.scf | 678,246,622 | 65,620 | 17.87K (10,504) | 7.49K (26,847) | 2591295 | 2020-10-29 | SAMN12124051 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Petrochromis sp. 'kipili brown' AB-2019 (2) | GCA_015111315.1_LDE4.scf | 674,292,583 | 63,506 | 18.72K (10,031) | 6.03K (33,552) | 2591295 | 2020-10-29 | SAMN12124052 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Petrochromis sp. 'giant' AB-2019 (2) | GCA_015111355.1_LDC6.scf | 685,615,114 | 58,823 | 21.30K (8,771) | 7.18K (28,171) | 2591293 | 2020-10-29 | SAMN12124046 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Petrochromis sp. 'giant' AB-2019 (2) | GCA_015112455.1_LHD2.scf | 680,468,209 | 61,360 | 19.64K (9,641) | 6.45K (31,726) | 2591293 | 2020-10-29 | SAMN12124100 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Lepidiolamprologus mimicus (2) | GCA_015111365.1_LDD1.scf | 678,300,739 | 77,792 | 14.57K (12,574) | 5.55K (37,173) | 559349 | 2020-10-29 | SAMN12124047 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Lepidiolamprologus mimicus (2) | GCA_015111395.1_LDD6.scf | 684,929,885 | 73,870 | 16.07K (11,273) | 6.21K (33,027) | 559349 | 2020-10-29 | SAMN12124048 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Petrochromis macrognathus (2) | GCA_015111435.1_LDA4.scf | 693,425,911 | 65,275 | 18.20K (10,722) | 8.55K (24,116) | 287480 | 2020-10-29 | SAMN12124043 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Petrochromis macrognathus (2) | GCA_015113115.1_LJB1.scf | 673,915,020 | 75,620 | 14.32K (13,439) | 6.41K (31,971) | 287480 | 2020-10-29 | SAMN12124112 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Petrochromis sp. 'moshi yellow' AB-2019 (2) | GCA_015111455.1_LCF6.scf | 683,228,998 | 59,374 | 20.83K (9,085) | 7.05K (28,810) | 2591297 | 2020-10-29 | SAMN12124041 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Petrochromis sp. 'moshi yellow' AB-2019 (2) | GCA_015111475.1_LCF8.scf | 692,230,688 | 60,912 | 20.21K (9,483) | 9.08K (22,485) | 2591297 | 2020-10-29 | SAMN12124042 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Tropheus sp. 'Kirschfleck' (2) | GCA_015111495.1_LCF1.scf | 695,420,430 | 58,373 | 21.48K (8,822) | 9.20K (22,222) | 198185 | 2020-10-29 | SAMN12124039 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Tropheus sp. 'Kirschfleck' (2) | GCA_015111515.1_LCF3.scf | 686,651,220 | 62,133 | 19.25K (9,813) | 8.11K (25,107) | 198185 | 2020-10-29 | SAMN12124040 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Petrochromis sp. 'red' AB-2019 (2) | GCA_015111535.1_LCD5.scf | 684,157,775 | 62,941 | 18.77K (10,129) | 7.65K (26,610) | 2591300 | 2020-10-29 | SAMN12124036 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Petrochromis sp. 'red' AB-2019 (2) | GCA_015111575.1_LCD1.scf | 683,142,697 | 63,476 | 18.52K (10,334) | 7.63K (26,909) | 2591300 | 2020-10-29 | SAMN12124035 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Bathybates ferox (2) | GCA_015111555.1_LCD7.scf | 679,623,610 | 86,585 | 11.68K (16,843) | 5.87K (35,898) | 27733 | 2020-10-29 | SAMN12124038 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Bathybates ferox (2) | GCA_015111595.1_LCD6.scf | 688,524,176 | 78,477 | 13.38K (14,703) | 6.51K (32,545) | 27733 | 2020-10-29 | SAMN12124037 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus sp. 'gracilis tanzania' AB-2019 (2) | GCA_015111615.1_LCC6.scf | 689,217,272 | 73,760 | 16.38K (10,887) | 7.54K (26,750) | 2591286 | 2020-10-29 | SAMN12124034 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus sp. 'gracilis tanzania' AB-2019 (2) | GCA_015111695.1_LCB4.scf | 687,601,997 | 73,844 | 16.35K (10,963) | 7.46K (26,945) | 2591286 | 2020-10-29 | SAMN12124031 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus sp. 'falcicula mahale' AB-2019 (2) | GCA_015111635.1_LCB5.scf | 676,758,759 | 76,684 | 15.21K (11,659) | 6.65K (29,967) | 2591284 | 2020-10-29 | SAMN12124032 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus sp. 'falcicula mahale' AB-2019 (2) | GCA_015111675.1_LCC2.scf | 670,804,512 | 79,316 | 14.32K (12,460) | 6.22K (32,141) | 2591284 | 2020-10-29 | SAMN12124033 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus leloupi (2) | GCA_015111655.1_LCA2.scf | 704,203,045 | 69,221 | 18.07K (10,134) | 7.79K (26,413) | 420108 | 2020-10-29 | SAMN12124030 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus leloupi (2) | GCA_015111735.1_LCA1.scf | 687,831,793 | 74,815 | 15.82K (11,503) | 6.01K (34,090) | 420108 | 2020-10-29 | SAMN12124029 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Telmatochromis dhonti (2) | GCA_015111715.1_LBF8.scf | 675,072,260 | 79,405 | 14.47K (12,230) | 6.82K (28,821) | 272717 | 2020-10-29 | SAMN12124028 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Telmatochromis dhonti (2) | GCA_015111745.1_LBF7.scf | 682,595,454 | 77,627 | 15.02K (11,826) | 7.32K (27,148) | 272717 | 2020-10-29 | SAMN12124027 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Julidochromis sp. 'marlieri south' AB-2019 (2) | GCA_015111775.1_LBF3.scf | 704,465,009 | 68,608 | 18.89K (9,587) | 8.85K (22,796) | 2591274 | 2020-10-29 | SAMN12124026 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Julidochromis sp. 'marlieri south' AB-2019 (2) | GCA_015111875.1_LBA1.scf | 691,068,485 | 68,827 | 18.59K (9,501) | 7.27K (27,403) | 2591274 | 2020-10-29 | SAMN12124023 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Oreochromis malagarasi | GCA_015111835.1_KYH4.scf | 705,671,466 | 61,075 | 22.30K (8,644) | 7.67K (27,393) | 64543 | 2020-10-29 | SAMN12124022 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Haplochromis paludinosus | GCA_015111855.1_KYG1.scf | 665,712,341 | 70,285 | 15.81K (11,896) | 6.57K (30,759) | 331646 | 2020-10-29 | SAMN12124021 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Orthochromis uvinzae | GCA_015111895.1_KYE7.scf | 685,472,408 | 64,683 | 17.79K (10,771) | 8.30K (24,827) | CR | 316391 | 2020-10-29 | SAMN12124020 | PRJNA550295 | "CICHLID~X" | fish | |
| bony fishes | Orthochromis malagaraziensis | GCA_015111915.1_KYE2.scf | 685,575,294 | 65,405 | 17.50K (10,939) | 8.36K (24,491) | VU | 64555 | 2020-10-29 | SAMN12124019 | PRJNA550295 | "CICHLID~X" | fish | |
| bony fishes | Telmatochromis bifrenatus (2) | GCA_015111935.1_KYB7.scf | 693,547,641 | 70,801 | 17.31K (10,359) | 8.13K (24,620) | 34809 | 2020-10-29 | SAMN12124016 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Telmatochromis bifrenatus (2) | GCA_015111975.1_KYB8.scf | 693,883,046 | 69,288 | 17.92K (10,028) | 8.31K (24,064) | 34809 | 2020-10-29 | SAMN12124017 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus niger (2) | GCA_015111955.1_KYA5.scf | 688,901,154 | 78,463 | 15.10K (11,837) | 7.68K (25,982) | 309899 | 2020-10-29 | SAMN12124015 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus niger (2) | GCA_015112015.1_KYA1.scf | 681,852,043 | 78,027 | 14.94K (11,929) | 7.01K (28,458) | 309899 | 2020-10-29 | SAMN12124014 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Ectodus sp. 'north' (2) | GCA_015112055.1_KHC5.scf | 678,686,595 | 78,667 | 14.81K (12,018) | 7.28K (27,104) | 1818571 | 2020-10-29 | SAMN12124012 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Ectodus sp. 'north' (2) | GCA_015112095.1_KHC4.scf | 681,491,488 | 75,985 | 15.83K (11,181) | 7.75K (25,307) | 1818571 | 2020-10-29 | SAMN12124011 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus cancellatus (2) | GCA_015112375.1_LJD1.scf | 533,574,869 | 120,574 | 5.86K (26,189) | 3.61K (46,465) | 2591254 | 2020-10-29 | SAMN12124118 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus cancellatus (2) | GCA_015113075.1_LJC9.scf | 650,738,931 | 98,023 | 10.19K (17,289) | 5.09K (38,067) | 2591254 | 2020-10-29 | SAMN12124117 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Telmatochromis sp. 'dhonti twiyu' AB-2019 (2) | GCA_015112395.1_LHF2.scf | 706,900,099 | 74,153 | 16.68K (10,923) | 7.27K (28,326) | 2591303 | 2020-10-29 | SAMN12124103 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Telmatochromis sp. 'dhonti twiyu' AB-2019 (2) | GCA_015112475.1_LHC1.scf | 714,934,337 | 64,790 | 20.53K (8,707) | 9.62K (21,003) | 2591303 | 2020-10-29 | SAMN12124099 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Trematocara caparti | GCA_015112415.1_LJC8.scf | 553,073,352 | 170,395 | 3.96K (41,511) | 3.08K (56,281) | 2591261 | 2020-10-29 | SAMN12124116 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus petricola (2) | GCA_015112495.1_LGH8.scf | 690,821,841 | 74,863 | 16.54K (10,821) | 7.08K (28,102) | 272718 | 2020-10-29 | SAMN12124093 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus petricola (2) | GCA_015112555.1_LGI1.scf | 697,605,287 | 70,292 | 18.01K (9,960) | 7.69K (26,229) | 272718 | 2020-10-29 | SAMN12124094 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Petrochromis sp. 'polyodon texas' AB-2019 (2) | GCA_015112515.1_LHB3.scf | 705,286,015 | 54,583 | 24.03K (8,010) | 10.91K (18,620) | 2591299 | 2020-10-29 | SAMN12124098 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Petrochromis sp. 'polyodon texas' AB-2019 (2) | GCA_015112535.1_LHB1.scf | 686,881,253 | 58,498 | 21.30K (8,905) | 7.51K (27,176) | 2591299 | 2020-10-29 | SAMN12124097 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Chalinochromis cyanophleps (2) | GCA_015112575.1_LGG7.scf | 691,640,008 | 74,334 | 16.35K (11,176) | 6.78K (30,078) | 1506565 | 2020-10-29 | SAMN12124090 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Chalinochromis cyanophleps (2) | GCA_015112635.1_LGG6.scf | 701,142,475 | 70,938 | 17.76K (10,176) | 7.80K (26,065) | 1506565 | 2020-10-29 | SAMN12124089 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Ophthalmotilapia sp. 'white cap' AB-2019 (2) | GCA_015112595.1_LGH3.scf | 683,395,352 | 77,578 | 15.29K (11,787) | 6.21K (32,378) | 2591290 | 2020-10-29 | SAMN12124092 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Ophthalmotilapia sp. 'white cap' AB-2019 (2) | GCA_015112615.1_LGH1.scf | 696,861,579 | 72,545 | 17.30K (10,482) | 7.78K (25,799) | 2591290 | 2020-10-29 | SAMN12124091 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus timidus (2) | GCA_015112655.1_LGE2.scf | 690,529,152 | 75,000 | 16.13K (11,306) | 6.74K (30,059) | 1492750 | 2020-10-29 | SAMN12124087 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus timidus (2) | GCA_015112675.1_LGE3.scf | 682,751,669 | 81,205 | 13.98K (12,971) | 6.95K (28,828) | 1492750 | 2020-10-29 | SAMN12124088 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Petrochromis sp. 'macrognathus rainbow' AB-2019 (2) | GCA_015112695.1_LGB5.scf | 676,678,530 | 63,146 | 18.90K (9,870) | 6.12K (33,028) | 2591296 | 2020-10-29 | SAMN12124085 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Petrochromis sp. 'macrognathus rainbow' AB-2019 (2) | GCA_015112775.1_LGB8.scf | 681,966,742 | 61,901 | 19.55K (9,639) | 6.47K (31,453) | 2591296 | 2020-10-29 | SAMN12124086 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Astatotilapia flaviijosephi | GCA_015112995.1_LJD2.scf | 648,774,917 | 84,191 | 11.78K (15,826) | 5.69K (34,944) | 205334 | 2020-10-29 | SAMN12124119 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Tangachromis dhanisi (2) | GCA_015113095.1_LJA8.scf | 714,222,081 | 59,427 | 22.04K (8,692) | 9.83K (20,907) | 1811344 | 2020-10-29 | SAMN12124111 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Tangachromis dhanisi (2) | GCA_015113135.1_LJA7.scf | 667,373,246 | 79,845 | 13.45K (13,838) | 6.13K (32,707) | 1811344 | 2020-10-29 | SAMN12124110 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Plecodus elaviae (2) | GCA_015113155.1_LHI6.scf | 697,720,206 | 59,228 | 20.44K (9,665) | 7.57K (27,866) | 452215 | 2020-10-29 | SAMN12124109 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Plecodus elaviae (2) | GCA_015113195.1_LHI4.scf | 693,561,716 | 59,796 | 19.93K (9,805) | 7.01K (30,122) | 452215 | 2020-10-29 | SAMN12124108 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Xenotilapia tenuidentata (2) | GCA_015113175.1_LHG4.scf | 710,078,883 | 74,687 | 16.37K (11,123) | 9.06K (22,167) | 27753 | 2020-10-29 | SAMN12124106 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Xenotilapia tenuidentata (2) | GCA_015118035.1_LHG6.scf | 710,602,812 | 73,694 | 16.70K (10,977) | 8.47K (23,834) | 27753 | 2020-10-29 | SAMN12124107 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Tropheus sp. 'murago' AB-2019 (2) | GCA_015113215.1_LHE3.scf | 694,619,420 | 61,832 | 19.65K (9,799) | 9.02K (22,698) | 2591311 | 2020-10-29 | SAMN12124102 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Tropheus sp. 'murago' AB-2019 (2) | GCA_015113295.1_LHD9.scf | 681,802,313 | 60,721 | 19.93K (9,613) | 6.44K (31,939) | 2591311 | 2020-10-29 | SAMN12124101 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Lepidiolamprologus sp. 'meeli kipili' AB-2019 (2) | GCA_015113235.1_LHA5.scf | 686,267,478 | 75,869 | 15.38K (11,843) | 6.34K (32,386) | 2591279 | 2020-10-29 | SAMN12124096 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Lepidiolamprologus sp. 'meeli kipili' AB-2019 (2) | GCA_015113315.1_LHA2.scf | 678,014,130 | 77,138 | 14.94K (12,124) | 5.76K (35,344) | 2591279 | 2020-10-29 | SAMN12124095 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus bifasciatus (2) | GCA_015113255.1_LHF7.scf | 695,688,542 | 71,372 | 17.26K (10,376) | 8.31K (24,286) | 449318 | 2020-10-29 | SAMN12124105 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Neolamprologus bifasciatus (2) | GCA_015113275.1_LHF6.scf | 694,528,962 | 71,776 | 17.21K (10,437) | 8.52K (23,471) | 449318 | 2020-10-29 | SAMN12124104 | PRJNA550295 | "CICHLID~X" | fish | ||
| bony fishes | Mormyrus lacerda | GCA_015163995.1_ASM1516399v1 | 796,858,152 | 82,859 | 13.30M (4) | 23.16K (7,767) | 2364103 | 2020-11-01 | SAMN11976054 | PRJNA547786 | IRIDIAN GENOMES | fish | ||
| bony fishes | Brevimyrus niger | GCA_015164015.1_ASM1516401v1 | 749,215,367 | 64,445 | 12.38M (5) | 23.01K (7,458) | 1194723 | 2020-11-01 | SAMN11109190 | PRJNA526749 | IRIDIAN GENOMES | fish | ||
| honeycomb rockfish | Sebastes umbrosus (4) | GCA_015220095.1_fSebUmb1.alt | 765,970,641 | 2,131 | 563.03K (383) | 558.99K (384) | 72105 | 2020-11-02 | SAMN12629503 | PRJNA562006 | Vertebrate Genomes Project | fish | ||
| honeycomb rockfish | Sebastes umbrosus (4) | GCA_015220745.1_fSebUmb1.pri | 800,921,631 | 139 | 34.91M (11) | 11.45M (24) | 72105 | 2020-11-03 | SAMN12629503 | PRJNA562005 | Vertebrate Genomes Project | fish | ||
| honeycomb rockfish | Sebastes umbrosus (4) | GCA_916701575.1_S-umbrosus_SEB-10 | 976,903,690 | 841 | 31.72M (14) | 3.82M (70) | 72105 | 2021-11-13 | SAMEA8992461 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| view | honeycomb rockfish | Sebastes umbrosus (4) | GCF_015220745.1_fSebUmb1.pri | 800,904,020 | 138 | 34.91M (11) | 11.45M (24) | 72105 | 2020-11-03 | SAMN12629503 | PRJNA562005 | Vertebrate Genomes Project | fish | |
| humpback puffer | Pao palembangensis | GCA_015343265.1_ASM1534326v1 | 356,041,988 | 5,053 | 15.81M (8) | 3.27M (29) | 1820603 | 2020-11-16 | SAMN15098013 | PRJNA597275 | BGI | fish | ||
| keppi | Sarotherodon lohbergeri (2) | GCA_015708405.1_Z05.scf | 734,669,951 | 43,505 | 40.15K (4,823) | 15.06K (13,483) | CR | 296553 | 2020-12-01 | SAMN12124122 | PRJNA550295 | "CICHLID~X" | fish | |
| keppi | Sarotherodon lohbergeri (2) | GCA_015708455.1_Z06.scf | 709,041,510 | 54,989 | 25.36K (7,641) | 6.70K (31,385) | CR | 296553 | 2020-12-01 | SAMN12124123 | PRJNA550295 | "CICHLID~X" | fish | |
| pindu | Stomatepia pindu | GCA_015708495.1_Z09.scf | 726,966,403 | 52,657 | 27.40K (7,359) | 9.10K (22,942) | CR | 143659 | 2020-12-01 | SAMN13929962 | PRJNA550295 | "CICHLID~X" | fish | |
| fissi | Sarotherodon caroli | GCA_015708515.1_Z17.scf | 718,506,404 | 50,285 | 30.18K (6,415) | 8.45K (24,559) | CR | 296554 | 2020-12-01 | SAMN13929963 | PRJNA550295 | "CICHLID~X" | fish | |
| bony fishes | Pungu maclareni | GCA_015708565.1_Z03.scf | 723,316,941 | 51,557 | 27.80K (7,103) | 8.86K (23,570) | CR | 296561 | 2020-12-01 | SAMN13929960 | PRJNA550295 | "CICHLID~X" | fish | |
| kululu | Sarotherodon steinbachi | GCA_015708585.1_Z07.scf | 725,750,946 | 46,952 | 34.70K (5,662) | 10.36K (20,228) | CR | 143546 | 2020-12-01 | SAMN13929961 | PRJNA550295 | "CICHLID~X" | fish | |
| mulloway | Argyrosomus japonicus | GCA_015710095.1_ASM1571009v1 | 791,960,397 | 1,984 | 13.11M (19) | EN | 448029 | 2020-12-02 | SAMN16453595 | PRJNA669485 | Zhejiang Ocean University | fish | ||
| bony fishes | Triplophysa dalaica | GCA_015846415.1_ASM1584641v1 | 607,923,607 | 50 | 23.63M (12) | 9.27M (21) | 1582913 | 2020-12-11 | SAMN14582390 | PRJNA624716 | HeNan Normal University and Wuhan diggers | fish | ||
| bony fishes | Cyprinodon tularosa (2) | GCA_016077235.1_ASM1607723v1 | 1,086,898,749 | 2,004 | 1.36M (236) | EN | 77115 | 2020-12-15 | SAMN16509697 | PRJNA670474 | Purdue University | fish | ||
| view | bony fishes | Cyprinodon tularosa (2) | GCF_016077235.1_ASM1607723v1 | 1,086,882,241 | 2,003 | 1.36M (236) | EN | 77115 | 2020-12-15 | SAMN16509697 | PRJNA670474 | Purdue University | fish | |
| lake trout | Salvelinus namaycush (2) | GCA_016432855.1_SaNama_1.0 | 2,345,513,379 | 4,121 | 44.98M (20) | 1.80M (252) | 8040 | 2021-01-06 | SAMN16985724 | PRJNA682269 | Universite Laval | fish | ||
| view | lake trout | Salvelinus namaycush (2) | GCF_016432855.1_SaNama_1.0 | 2,345,513,378 | 4,121 | 44.98M (20) | 1.80M (252) | 8040 | 2021-01-06 | SAMN16985724 | PRJNA682269 | Universite Laval | fish | |
| starry toado | Arothron firmamentum | GCA_016586285.1_aroFir_1.0 | 334,905,208 | 10,793 | 134.97K (678) | 17.03K (5,465) | 264149 | 2020-12-09 | SAMD00166120 | PRJDB8105 | Graduate School of Frontier Biosciences, Osaka University | fish | ||
| dragonet | Callionymus lyra | GCA_016630915.1_ASM1663091v1 | 568,707,486 | 1,205 | 26.70M (9) | 2.20M (72) | 34785 | 2021-01-13 | SAMN15526017 | PRJNA634838 | Senckenberg Nature Research Society | fish | ||
| yellowstripe goby | Mugilogobius chulae | GCA_016735935.1_ASM1673593v1 | 1,003,362,100 | 732 | 42.46M (11) | 701.22K (344) | 88201 | 2021-01-27 | SAMN13698228 | PRJNA598084 | Guangdong Laboratory Animals Monitoring Institute | fish | ||
| Indian spiny turbot | Psettodes erumei | GCA_016785225.1_ASM1678522v1 | 466,551,601 | 970 | 2.45M (56) | 195640 | 2021-02-01 | SAMN13439343 | PRJNA592748 | Center for Ecological and Environmental Sciences | fish | |||
| ocellated flounder | Pseudorhombus dupliciocellatus | GCA_016785235.1_ASM1678523v1 | 395,092,285 | 9,053 | 2.69M (39) | 538.67K (216) | 367197 | 2021-02-01 | SAMN13439311 | PRJNA592743 | Center for Ecological and Environmental Sciences | fish | ||
| Bloch's tonguesole | Paraplagusia blochii | GCA_016785265.1_ASM1678526v1 | 555,100,837 | 58,880 | 178.07K (872) | 37.51K (3,942) | 366904 | 2021-02-01 | SAMN13439296 | PRJNA592738 | Center for Ecological and Environmental Sciences | fish | ||
| oriental sole | Brachirus orientalis | GCA_016785285.1_ASM1678528v1 | 629,956,282 | 19,394 | 5.48M (33) | 352.13K (518) | 435138 | 2021-02-01 | SAMN13439273 | PRJNA592734 | Center for Ecological and Environmental Sciences | fish | ||
| New Zealand turbot | Colistium nudipinnis | GCA_016785305.1_ASM1678530v1 | 427,535,253 | 26,075 | 739.84K (147) | 141.81K (824) | 1156758 | 2021-02-01 | SAMN13439310 | PRJNA592742 | Center for Ecological and Environmental Sciences | fish | ||
| pelican flounder | Chascanopsetta lugubris | GCA_016785325.1_ASM1678532v1 | 577,766,669 | 115,364 | 66.03K (2,438) | 14.71K (10,094) | 1003706 | 2021-02-01 | SAMN13439309 | PRJNA592739 | Center for Ecological and Environmental Sciences | fish | ||
| hogchoker | Trinectes maculatus | GCA_016785345.1_ASM1678534v1 | 450,194,497 | 41,274 | 373.14K (366) | 103.92K (1,242) | 195658 | 2021-02-01 | SAMN13439179 | PRJNA592733 | Center for Ecological and Environmental Sciences | fish | ||
| chain pickerel | Esox niger | GCA_016801105.1_ASM1680110v1 | 859,849,040 | 331,883 | 35.16K (6,260) | 30.39K (7,353) | 184451 | 2021-02-02 | SAMN15002828 | PRJNA634624 | INRA | fish | ||
| bony fishes | Novumbra hubbsi | GCA_016801125.1_ASM1680112v1 | 756,209,402 | 396,154 | 27.97K (6,674) | 17.94K (10,955) | 75937 | 2021-02-02 | SAMN15002829 | PRJNA634624 | INRA | fish | ||
| eastern mudminnow | Umbra pygmaea | GCA_016801145.1_ASM1680114v1 | 1,950,255,054 | 1,757,159 | 8.81K (47,154) | 7.74K (61,110) | 75934 | 2021-02-02 | SAMN15002831 | PRJNA634624 | INRA | fish | ||
| muskellunge | Esox masquinongy (2) | GCA_016801175.1_ASM1680117v1 | 1,138,222,515 | 649,832 | 33.56K (8,460) | 19.57K (15,174) | 126735 | 2021-02-02 | SAMN15002827 | PRJNA634624 | INRA | fish | ||
| muskellunge | Esox masquinongy (2) | GCA_016801255.1_ASM1680125v1 | 1,093,763,249 | 483,856 | 32.60K (8,593) | 22.59K (12,838) | 126735 | 2021-02-02 | SAMN15002826 | PRJNA634624 | INRA | fish | ||
| Alaska blackfish | Dallia pectoralis | GCA_016801195.1_ASM1680119v1 | 855,499,026 | 989,749 | 5.08K (30,348) | 5.06K (35,092) | 75939 | 2021-02-02 | SAMN15002830 | PRJNA634624 | INRA | fish | ||
| blackspot threadfin | Polydactylus sextarius | GCA_016801845.1_ASM1680184v1 | 564,623,279 | 454 | 22.26M (11) | 18.42M (13) | 435218 | 2021-02-04 | SAMN13439312 | PRJNA592744 | Center for Ecological and Environmental Sciences | fish | ||
| largescale archerfish | Toxotes chatareus | GCA_016801885.1_ASM1680188v1 | 618,729,764 | 1,567 | 23.93M (12) | 8.43M (21) | 270537 | 2021-02-04 | SAMN13439313 | PRJNA592745 | Center for Ecological and Environmental Sciences | fish | ||
| starry flounder | Platichthys stellatus | GCA_016801935.1_ASM1680193v1 | 609,990,026 | 31,621 | 25.10M (11) | 33.20K (4,965) | 195632 | 2021-02-04 | SAMN13439178 | PRJNA592732 | Center for Ecological and Environmental Sciences | fish | ||
| swordfish | Xiphias gladius (2) | GCA_016859285.1_ASM1685928v1 | 691,790,571 | 1,482 | 29.22M (11) | 5.25M (36) | 8245 | 2021-02-12 | SAMN16522248 | PRJNA670841 | Institute of Deep-Sea Science and Engineering, Chinese Academy of Sciences | fish | ||
| view | swordfish | Xiphias gladius (2) | GCF_016859285.1_ASM1685928v1 | 691,780,295 | 1,482 | 29.22M (11) | 5.25M (36) | 8245 | 2021-02-12 | SAMN16522248 | PRJNA670841 | Institute of Deep-Sea Science and Engineering, Chinese Academy of Sciences | fish | |
| Indo-Pacific sailfish | Istiophorus platypterus | GCA_016859345.1_ASM1685934v1 | 614,147,335 | 471 | 26.28M (11) | 11.85M (17) | 13575 | 2021-02-12 | SAMN16522249 | PRJNA670841 | Institute of Deep-Sea Science and Engineering, Chinese Academy of Sciences | fish | ||
| bony fishes | Oryzias woworae | GCA_016861445.1_OryWow_0.9 | 699,501,264 | 1,666 | 3.02M (58) | EN | 1221322 | 2021-01-14 | SAMD00264440 | PRJDB10959 | National Institute of Genetics | fish | ||
| three-spined stickleback | Gasterosteus aculeatus aculeatus (2) | GCA_016920845.1_GAculeatus_UGA_version5 | 471,893,560 | 2,937 | 20.45M (10) | 485.75K (253) | 481459 | 2021-02-23 | SAMN15223905 | PRJNA639125 | University of Georgia | fish | ||
| view | three-spined stickleback | Gasterosteus aculeatus aculeatus (2) | GCF_016920845.1_GAculeatus_UGA_version5 | 471,894,361 | 2,937 | 20.45M (10) | 485.75K (253) | 481459 | 2021-02-23 | SAMN15223905 | PRJNA639125 | University of Georgia | fish | |
| African pike characin | Hepsetus odoe | GCA_017165825.1_ASM1716582v1 | 862,056,194 | 25,653 | 25.84M (15) | 476.52K (480) | 42563 | 2021-03-04 | SAMN14603884 | PRJNA625402 | BGI | fish | ||
| bony fishes | Paedocypris sp. Pulau Singkep (2) | GCA_017309765.1_IMCB_Psing_M_1.0 | 402,724,664 | 2,824 | 7.35M (16) | 42.84K (2,365) | 432429 | 2021-03-02 | SAMN15089894 | PRJNA636913 | Institute of Molecular and Cell Biology, A*STAR, Singapore | fish | ||
| bony fishes | Paedocypris sp. Pulau Singkep (2) | GCA_017309775.1_IMCB_Psing_F_1.0 | 403,662,444 | 2,968 | 11.03M (13) | 36.29K (2,848) | 432429 | 2021-03-02 | SAMN15089893 | PRJNA636914 | Institute of Molecular and Cell Biology, A*STAR, Singapore | fish | ||
| eulachon | Thaleichthys pacificus (2) | GCA_017311245.1_Tpac_1.0 | 416,131,685 | 324,311 | 3.05K (34,106) | 2.92K (35,363) | 240832 | 2021-03-09 | SAMN17779494 | PRJNA699474 | Fisheries and Oceans Canada | fish | ||
| pink salmon | Oncorhynchus gorbuscha (3) | GCA_017355495.1_Ogor_1.0 | 2,533,396,071 | 17,030 | 1.77M (383) | 1.75M (386) | 8017 | 2021-03-24 | SAMN16688056 | PRJNA556728 | Fisheries and Oceans Canada | fish | ||
| view | pink salmon | Oncorhynchus gorbuscha (3) | GCF_021184085.1_OgorEven_v1.0 | 2,690,283,663 | 19,028 | 85.61M (14) | 8017 | 2021-12-15 | SAMN18987060 | PRJNA556728 | Fisheries and Oceans Canada | fish | ||
| view | allis shad | Alosa alosa (4) | GCF_017589495.1_AALO_Geno_1.1 | 854,464,681 | 1,095 | 35.35M (12) | n/a | n/a | n/a | fish | ||||
| allis shad | Alosa alosa (4) | GCA_017589495.1_AALO_Geno_1.0 | 854,597,291 | 1,101 | 35.35M (12) | 1.19M (207) | 278164 | 2021-03-30 | SAMN16418510 | PRJNA668689 | GenoFish | fish | ||
| bony fishes | Aplochiton taeniatus (2) | GCA_017639675.1_fAplTae1.pri | 461,946,147 | 41 | 20.39M (8) | 956.54K (145) | 946358 | 2021-03-30 | SAMN12623621 | PRJNA561971 | Vertebrate Genomes Project | fish | ||
| bony fishes | Aplochiton taeniatus (2) | GCA_017639685.1_fAplTae1.alt | 560,414,924 | 5,690 | 156.48K (1,075) | 156.48K (1,075) | 946358 | 2021-03-30 | SAMN12623621 | PRJNA561972 | Vertebrate Genomes Project | fish | ||
| Boeseman's rainbowfish | Melanotaenia boesemani (3) | GCA_017639745.1_fMelBoe1.pri | 865,592,505 | 93 | 37.88M (11) | 9.30M (28) | EN | 1250792 | 2021-03-30 | SAMN12623618 | PRJNA561965 | Vertebrate Genomes Project | fish | |
| Boeseman's rainbowfish | Melanotaenia boesemani (3) | GCA_017639755.1_fMelBoe1.alt | 764,404,102 | 3,194 | 412.53K (493) | 411.98K (497) | EN | 1250792 | 2021-03-30 | SAMN12623618 | PRJNA561966 | Vertebrate Genomes Project | fish | |
| view | Boeseman's rainbowfish | Melanotaenia boesemani (3) | GCF_017639745.1_fMelBoe1.pri | 865,592,457 | 93 | 37.88M (11) | 9.30M (28) | EN | 1250792 | 2021-03-30 | SAMN12623618 | PRJNA561965 | Vertebrate Genomes Project | fish |
| bony fishes | Limnothrissa miodon | GCA_017657215.1_ASM1765721v1 | 580,924,283 | 6,725 | 455.49K (291) | 31.14K (4,764) | 55124 | 2021-04-02 | SAMN18379308 | PRJNA639150 | EAWAG | fish | ||
| banded archerfish | Toxotes jaculatrix (3) | GCA_017976295.1_fToxJac2.alt | 594,660,453 | 2,393 | 493.49K (351) | 493.49K (351) | 941984 | 2021-04-15 | SAMN18445299 | PRJNA717045 | Vertebrate Genomes Project | fish | ||
| banded archerfish | Toxotes jaculatrix (3) | GCA_017976425.1_fToxJac2.pri | 621,503,431 | 96 | 26.86M (11) | 15.56M (16) | 941984 | 2021-04-15 | SAMN18445299 | PRJNA717046 | Vertebrate Genomes Project | fish | ||
| view | banded archerfish | Toxotes jaculatrix (3) | GCF_017976425.1_fToxJac2.pri | 621,503,431 | 96 | 26.86M (11) | 15.56M (16) | 941984 | 2021-04-15 | SAMN18445299 | PRJNA717046 | Vertebrate Genomes Project | fish | |
| copperband butterflyfish | Chelmon rostratus (3) | GCA_017976315.1_fCheRos1.alt | 601,666,562 | 2,125 | 470.29K (380) | 470.29K (380) | 109905 | 2021-04-15 | SAMN12623620 | PRJNA561970 | Vertebrate Genomes Project | fish | ||
| copperband butterflyfish | Chelmon rostratus (3) | GCA_017976325.1_fCheRos1.pri | 644,208,416 | 29 | 27.78M (11) | 16.96M (15) | 109905 | 2021-04-15 | SAMN12623620 | PRJNA561969 | Vertebrate Genomes Project | fish | ||
| view | copperband butterflyfish | Chelmon rostratus (3) | GCF_017976325.1_fCheRos1.pri | 644,208,431 | 29 | 27.78M (11) | 16.96M (15) | 109905 | 2021-04-15 | SAMN12623620 | PRJNA561969 | Vertebrate Genomes Project | fish | |
| African bonytongue | Heterotis niloticus | GCA_018136845.1_ASM1813684v1 | 670,838,590 | 3,798 | 32.43M (9) | 4.57M (45) | 91721 | 2021-04-26 | SAMN16252091 | PRJNA665338 | BGI-Qingdao | fish | ||
| bony fishes | Sinocyclocheilus maitianheensis | GCA_018148995.1_ASM1814899v1 | 1,680,372,801 | 38,550 | 1.36M (364) | 28.59K (16,007) | 307951 | 2021-04-28 | SAMN16435219 | PRJNA669120 | BGI Academy of Marine Sciences | fish | ||
| eyeless golden-line fish | Sinocyclocheilus anophthalmus | GCA_018155175.1_ASM1815517v1 | 1,913,933,076 | 12,238 | 310.31K (1,818) | 279.20K (2,026) | VU | 307955 | 2021-04-28 | SAMN16435488 | PRJNA669129 | BGI Academy of Marine Sciences | fish | |
| humphead wrasse | Cheilinus undulatus (2) | GCA_018320785.1_ASM1832078v1 | 1,173,455,521 | 45 | 51.47M (11) | 16.48M (21) | EN | 241271 | 2021-05-12 | SAMN14532944 | PRJNA622923 | Shanghai Ocean University | fish | |
| view | humphead wrasse | Cheilinus undulatus (2) | GCF_018320785.1_ASM1832078v1 | 1,173,472,134 | 46 | 51.47M (11) | 16.48M (21) | EN | 241271 | 2021-05-12 | SAMN14532944 | PRJNA622923 | Shanghai Ocean University | fish |
| Japanese smelt | Hypomesus nipponensis | GCA_018346875.1_ASM1834687v1 | 34,375,595 | 20,639 | 2.12K (4,876) | 182223 | 2021-05-12 | SAMN16577099 | PRJNA672783 | Kangwon National University | fish | |||
| bony fishes | Cyprinodon brontotheroides | GCA_018398635.1_UCB_Cbro_1.0 | 1,162,749,926 | 15,710 | 30.09M (16) | 71.03K (3,859) | 1987526 | 2021-05-19 | SAMN17087232 | PRJNA685538 | University of California Berkeley | fish | ||
| lake whitefish | Coregonus clupeaformis (4) | GCA_018398675.1_ASM1839867v1 | 2,682,612,298 | 6,355 | 57.49M (19) | 5.73M (108) | 59861 | 2021-05-25 | SAMN18351024 | PRJNA715481 | Laval University | fish | ||
| lake whitefish | Coregonus clupeaformis (4) | GCA_020615455.1_ASM2061545v1 | 2,753,287,357 | 7,334 | 52.02M (22) | 2.18M (274) | 59861 | 2021-11-04 | SAMN21920801 | PRJNA767633 | Laval University | fish | ||
| view | lake whitefish | Coregonus clupeaformis (4) | GCF_020615455.1_ASM2061545v1 | 2,753,287,365 | 7,334 | 52.02M (22) | 2.18M (274) | 59861 | 2021-11-04 | SAMN21920801 | PRJNA767633 | Laval University | fish | |
| mirrorwing flyingfish | Hirundichthys speculiger | GCA_018398805.1_Hirundichthys_speculiger_1.0 | 1,043,046,751 | 3,052 | 1.15M (215) | 1.09M (225) | 938393 | 2021-05-19 | SAMN18318554 | PRJNA714815 | Shenzhen Key Lab of Marine Genomics | fish | ||
| bony fishes | Haplochromis chilotes | GCA_018403475.1_Hchi_1.0 | 798,403,686 | 18,943 | 1.54M (142) | 20.89K (9,692) | 257977 | 2021-04-06 | SAMD00269309 | PRJDB10850 | Tokyo Institute of Technology | fish | ||
| bony fishes | Haplochromis sauvagei | GCA_018403495.1_Hsau_1.0 | 805,051,152 | 23,488 | 1.21M (178) | 21.83K (9,509) | VU | 77313 | 2021-04-06 | SAMD00269310 | PRJDB10850 | Tokyo Institute of Technology | fish | |
| bony fishes | Lithochromis rufus | GCA_018403515.1_Lruf_1.0 | 790,111,796 | 23,938 | 1.16M (183) | 15.65K (13,112) | 934270 | 2021-04-06 | SAMD00269311 | PRJDB10850 | Tokyo Institute of Technology | fish | ||
| big-belly seahorse | Hippocampus abdominalis | GCA_018466805.1_ZJU1.0 | 444,667,964 | 167 | 21.77M (9) | 8.41M (18) | 109274 | 2021-05-25 | SAMN18594038 | PRJNA713516 | Zhejiang University | fish | ||
| bony fishes | Gobiocypris rarus (2) | GCA_018491645.1_ASM1849164v1 | 959,117,570 | 565 | 36.59M (12) | 5.33M (51) | 143606 | 2021-05-26 | SAMN18323793 | PRJNA715041 | ihb | fish | ||
| American shad | Alosa sapidissima (4) | GCA_018492685.1_fAloSap1.pri | 903,564,947 | 73 | 38.44M (11) | 1.57M (165) | 34773 | 2021-05-25 | SAMN18857608 | PRJNA728145 | Vertebrate Genomes Project | fish | ||
| American shad | Alosa sapidissima (4) | GCA_018492705.1_fAloSap1.alt | 852,425,339 | 5,410 | 361.04K (661) | 361.04K (661) | 34773 | 2021-05-24 | SAMN18857608 | PRJNA728146 | Vertebrate Genomes Project | fish | ||
| American shad | Alosa sapidissima (4) | GCA_019202745.1_Alosa.v1 | 920,207,828 | 273 | 37.99M (11) | 1.15M (215) | 34773 | 2021-07-13 | SAMN19518901 | PRJNA732845 | OE Biotech.co.Ltd | fish | ||
| view | American shad | Alosa sapidissima (4) | GCF_018492685.1_fAloSap1.pri | 903,581,644 | 74 | 38.44M (11) | 1.57M (165) | 34773 | 2021-05-25 | SAMN18857608 | PRJNA728145 | Vertebrate Genomes Project | fish | |
| milkfish | Chanos chanos (4) | GCA_018691325.1_CCHAN_1.0 | 659,336,151 | 1,683 | 3.18M (49) | 29144 | 2021-06-03 | SAMN17922191 | PRJNA702026 | GenoFish | fish | |||
| view | milkfish | Chanos chanos (4) | GCA_902362175.1_fChaCha1.1_alternate_haplotype | 637,484,823 | 1,937 | 508.00K (366) | 508.00K (366) | 29144 | 2019-08-16 | SAMEA5159473 | PRJEB33881 | SC | fish | |
| milkfish | Chanos chanos (4) | GCA_902362185.1_fChaCha1.1 | 656,912,816 | 30 | 50.30M (6) | 23.13M (11) | 29144 | 2019-08-14 | SAMEA5159473 | PRJEB33882 | SC | fish | ||
| view | milkfish | Chanos chanos (4) | GCF_902362185.1_fChaCha1.1 | 656,929,047 | 31 | 50.30M (6) | 23.13M (11) | 29144 | 2019-08-14 | SAMEA5159473 | PRJEB33882 | SC | fish | |
| four-eyed sleeper | Bostrychus sinensis (2) | GCA_018703735.1_ASM1870373v1 | 865,256,608 | 3,915 | 37.61M (11) | 101.66K (2,256) | 86224 | 2021-06-03 | SAMN15198413 | PRJNA638439 | Xiamen University | fish | ||
| four-eyed sleeper | Bostrychus sinensis (2) | GCA_020698575.1_ASM2069857v1 | 885,739,387 | 62 | 39.19M (11) | 28.28M (14) | 86224 | 2021-11-02 | SAMN20923843 | PRJNA756677 | Zhejiang Ocean University | fish | ||
| bony fishes | Paracanthobrama guichenoti | GCA_018749465.1_ASM1874946v1 | 1,087,759,805 | 6,419 | 38.75M (13) | 1.97M (152) | 291819 | 2021-06-08 | SAMN17120673 | PRJNA686690 | Chinese Academy of Fishery Sciences | fish | ||
| Sumatra barb | Puntigrus tetrazona (2) | GCA_018831695.1_ASM1883169v1 | 730,818,387 | 1,122 | 25.09M (13) | 1.42M (131) | 1606681 | 2021-06-10 | SAMN17036344 | PRJNA683758 | China Academy of Fishery Sciencey | fish | ||
| view | Sumatra barb | Puntigrus tetrazona (2) | GCF_018831695.1_ASM1883169v1 | 730,818,536 | 1,122 | 25.09M (13) | 1.42M (131) | 1606681 | 2021-06-10 | SAMN17036344 | PRJNA683758 | China Academy of Fishery Sciencey | fish | |
| bluefin trevally | Caranx melampygus | GCA_019059645.1_BYU_Cmel_1.0 | 710,793,090 | 3,576 | 1.47M (120) | 181461 | 2021-06-29 | SAMN17839201 | PRJNA670455 | Brigham Young University | fish | |||
| bony fishes | Hemibagrus wyckioides | GCA_019097595.1_SWU_Hwy_1.0 | 789,799,567 | 72 | 26.01M (13) | 21.70M (15) | 337641 | 2021-07-06 | SAMN18644987 | PRJNA720277 | Southwest University | fish | ||
| tomato hind | Cephalopholis sonnerati | GCA_019142605.1_JJU_Cson_1.0 | 1,043,730,103 | 196 | 43.99M (12) | 2.48M (127) | 160708 | 2021-07-06 | SAMN17766311 | PRJNA699118 | Jiujiang University | fish | ||
| bony fishes | Beaufortia kweichowensis | GCA_019155185.1_ASM1915518v1 | 448,565,924 | 247 | 17.95M (12) | 5.53M (24) | 241442 | 2021-07-07 | SAMN15699278 | PRJNA650219 | Institute of Hydrobiology | fish | ||
| Senegalese sole | Solea senegalensis (4) | GCA_019176455.1_IFAPA_SoseM_1 | 603,518,608 | 1,936 | 26.09M (10) | 1.19M (138) | 28829 | 2021-07-09 | SAMN15430148 | PRJNA643826 | IFAPA | fish | ||
| view | Senegalese sole | Solea senegalensis (4) | GCF_019176455.1_IFAPA_SoseM_1 | 603,535,267 | 1,937 | 26.09M (10) | 1.19M (138) | 28829 | 2021-07-09 | SAMN15430148 | PRJNA643826 | IFAPA | fish | |
| bony fishes | Cirrhinus cirrhosus | GCA_019207145.1_ASM1920714v1 | 1,152,796,905 | 787,988 | 10.15K (28,087) | VU | 381635 | 2021-07-13 | SAMN18021127 | PRJNA688724 | Chittagong Veterinary and Animal Sciences University; University of Chittagong (HRRL) | fish | ||
| barecheek goby | Rhinogobius similis | GCA_019453435.1_ASM1945343v1 | 890,097,861 | 22 | 41.51M (10) | 1.57M (167) | 1263952 | 2021-08-10 | SAMN19217403 | PRJNA730052 | Shou(SHANGHAI OCEAN UNIVERSITY) | fish | ||
| zig-zag eel | Mastacembelus armatus (7) | GCA_019455525.1_Marm_hapY | 589,793,654 | 283 | 25.17M (11) | 9.72M (20) | 205130 | 2021-08-09 | SAMN14169820 | PRJNA693890 | University of Vienna | fish | ||
| zig-zag eel | Mastacembelus armatus (7) | GCA_019455535.1_Marm_hapX | 591,921,084 | 340 | 25.09M (11) | 9.10M (23) | 205130 | 2021-08-09 | SAMN14169820 | PRJNA693891 | University of Vienna | fish | ||
| zig-zag eel | Mastacembelus armatus (7) | GCA_900324485.3_fMasArm1.3 | 591,951,591 | 123 | 25.09M (11) | 8.01M (25) | 205130 | 2021-04-24 | SAMEA104026378 | PRJEB25769 | Wellcome Sanger Institute | fish | ||
| view | zig-zag eel | Mastacembelus armatus (7) | GCF_900324485.2_fMasArm1.2 | 591,951,587 | 123 | 25.09M (11) | 8.01M (25) | 205130 | 2019-03-16 | SAMEA104026378 | PRJEB25769 | SC | fish | |
| zig-zag eel | Mastacembelus armatus (7) | GCA_900324485.1_fMasArm1.1 | 593,065,986 | 125 | 24.81M (11) | 8.01M (25) | 205130 | 2018-03-31 | SC | fish | ||||
| view | zig-zag eel | Mastacembelus armatus (7) | GCF_900324485.1_fMasArm1.1 | 593,082,472 | 126 | 24.81M (11) | 8.01M (25) | 205130 | 2018-03-31 | SC | fish | |||
| shuttles hoppfish | Periophthalmus modestus | GCA_019594935.1_ASM1959493v1 | 854,419,050 | 1,417 | 32.91M (12) | 576.04K (377) | 146921 | 2021-08-13 | SAMN15953065 | PRJNA660579 | National Marine Biodiversity Institute of Korea | fish | ||
| Chinese sucker | Myxocyprinus asiaticus | GCA_019703515.1_MX_HiC_50CHRs.fa | 2,581,058,468 | 1,067 | 48.47M (24) | 4.19M (185) | 70543 | 2021-08-25 | SAMN19774990 | PRJNA739167 | University at Buffalo | fish | ||
| orange-fin labeo | Labeo calbasu | GCA_019740295.1_ASM1974029v1 | 1,041,791,683 | 538,835 | 13.44K (19,919) | 10.12K (27,193) | 177615 | 2021-08-24 | SAMN19406530 | PRJNA689123 | Chittagong Veterinary and Animal Sciences University; University of Chittagong (HRRL) | fish | ||
| bony fishes | Stomatorhinus ivindoensis | GCA_019775895.1_ASM1977589v1 | 713,085,327 | 529,132 | 2.00K (105,240) | 2.02K (98,893) | EN | 112284 | 2021-08-26 | SAMN11975468 | PRJNA547748 | IRIDIAN GENOMES | fish | |
| bony fishes | Pollimyrus plagiostoma | GCA_019775915.1_ASM1977591v1 | 782,058,023 | 586,373 | 2.05K (108,523) | 2.06K (98,502) | 1676934 | 2021-08-26 | SAMN11975473 | PRJNA547754 | IRIDIAN GENOMES | fish | ||
| bony fishes | Pollimyrus isidori | GCA_019775955.1_ASM1977595v1 | 786,908,648 | 653,928 | 1.85K (119,312) | 1.90K (107,336) | 91713 | 2021-08-26 | SAMN11976030 | PRJNA547785 | IRIDIAN GENOMES | fish | ||
| mandarinfish | Synchiropus splendidus | GCA_019776025.1_fSynSpl_1.0 | 482,926,376 | 9,210 | 12.19M (14) | 66.19K (2,001) | 270530 | 2021-08-26 | SAMN15547574 | PRJNA646594 | University of Oregon | fish | ||
| dotted corydoras | Corydoras maculifer | GCA_019802435.1_ASM1980243v1 | 636,368,989 | 1,948 | 1.08M (150) | 43.88K (3,334) | 927906 | 2021-08-30 | SAMN18128408 | PRJNA706379 | University of East Anglia | fish | ||
| bony fishes | Corydoras sp. C115 | GCA_019802505.1_Lin1PacBio.ctg.fa.r3p3_pilon_3_oneline.fasta | 699,660,186 | 2,080 | 1.56M (94) | 2816404 | 2021-08-30 | SAMN18128058 | PRJNA706371 | University of East Anglia | fish | |||
| common seadragon | Phyllopteryx taeniolatus (2) | GCA_019802525.1_ASM1980252v1 | 642,859,623 | 158 | 30.86M (10) | 15.06M (17) | 161469 | 2021-09-09 | SAMN16446374 | PRJNA669508 | South China Sea Institute of Oceanology, Chinese Academy of Sciences | fish | ||
| common seadragon | Phyllopteryx taeniolatus (2) | GCA_019802545.1_ASM1980254v1 | 668,103,038 | 895 | 30.98M (10) | 12.82M (18) | 161469 | 2021-09-09 | SAMN16446373 | PRJNA669508 | South China Sea Institute of Oceanology, Chinese Academy of Sciences | fish | ||
| alligator pipefish | Syngnathoides biaculeatus (2) | GCA_019802575.1_ASM1980257v1 | 648,227,020 | 445 | 20.99M (11) | 300417 | 2021-08-30 | SAMN16446371 | PRJNA669508 | South China Sea Institute of Oceanology, Chinese Academy of Sciences | fish | |||
| alligator pipefish | Syngnathoides biaculeatus (2) | GCA_019802595.1_ASM1980259v1 | 636,519,225 | 142 | 31.87M (9) | 18.02M (13) | 300417 | 2021-09-09 | SAMN16446372 | PRJNA669508 | South China Sea Institute of Oceanology, Chinese Academy of Sciences | fish | ||
| silver crucian carp | Carassius gibelio (5) | GCA_019843895.1_ASM1984389v1 | 1,930,848,899 | 2,569 | 29.26M (26) | 2.18M (213) | 101364 | 2021-09-01 | SAMN11978084 | PRJNA546443 | Institute of Hydrobiology, Chinese Academy of Sciences | fish | ||
| grass carp | Ctenopharyngodon idella | GCA_019924925.1_HZGC01 | 893,198,495 | 30 | 35.66M (11) | 19.32M (17) | 7959 | 2021-09-14 | SAMN20170273 | PRJNA745929 | HuaZhong Agricultural University | fish | ||
| ayu | Plecoglossus altivelis (3) | GCA_019972215.1_Pal_1.0 | 449,104,997 | 4,035 | 4.32M (27) | 113.53K (844) | 61084 | 2021-07-20 | SAMD00197082 | PRJDB9085 | laboratory of fish culture, Department of Marine Biosciences, Tokyo University of Marine Science and Technology | fish | ||
| eastern little tuna | Euthynnus affinis | GCA_019973915.1_EUTAFF_01 | 758,243,246 | 10,237 | 29.18M (12) | 84.20K (2,326) | 8227 | 2021-09-09 | SAMD00325587 | PRJDB11734 | South Ehime Fisheries Research Center, Ehime University | fish | ||
| crimson snapper | Lutjanus erythropterus | GCA_020091685.1_ASM2009168v1 | 969,885,659 | 10,853 | 40.65M (11) | 2.78M (102) | 211835 | 2021-09-23 | SAMN16091799 | PRJNA662638 | Guangdong Ocean University | fish | ||
| bony fishes | Brachyhypopomus occidentalis | GCA_020368025.1_ASM2036802v1 | 540,332,535 | 1,435 | 5.41M (32) | 5.18M (33) | 1194720 | 2021-10-07 | SAMN19011640 | PRJNA727273 | Smithsonian Tropical Research Institute | fish | ||
| bony fishes | Scatophagus argus (3) | GCA_020382885.1_fScaArg1.pri | 570,802,272 | 48 | 24.45M (11) | 17.19M (14) | 75038 | 2021-10-13 | SAMN12623616 | PRJNA749579 | G10K | fish | ||
| bony fishes | Scatophagus argus (3) | GCA_020382915.1_fScaArg1.alt | 563,244,951 | 1,592 | 852.97K (180) | 852.97K (180) | 75038 | 2021-10-07 | SAMN12623616 | PRJNA749580 | G10K | fish | ||
| view | butterfish | Scatophagus argus (3) | GCF_020382885.2_fScaArg1.pri | 570,802,272 | 48 | 24.45M (11) | 75038 | 2021-10-13 | SAMN12623616 | PRJNA749579 | G10K | fish | ||
| tuber cardinalfish | Siphamia tubifer | GCA_020466265.1_ASM2046626v1 | 1,200,845,361 | 119 | 51.16M (11) | 2.34M (133) | 1536898 | 2021-10-15 | SAMN19670674 | PRJNA736963 | California Academy of Sciences | fish | ||
| blotched snakehead | Channa maculata | GCA_020496755.1_ASM2049675v1 | 618,823,650 | 254 | 28.37M (9) | 21.73M (13) | 188791 | 2021-10-14 | SAMN19231567 | PRJNA730430 | Chinese Academy of Sciences | fish | ||
| bony fishes | Pholidichthys leucotaenia (2) | GCA_020510965.1_fPhoLeu1.alt | 1,865,716,438 | 21,417 | 136.10K (3,761) | 134.82K (3,801) | 390368 | 2021-10-15 | SAMN12623617 | PRJNA749576 | G10K | fish | ||
| bony fishes | Pholidichthys leucotaenia (2) | GCA_020510985.1_fPhoLeu1.pri | 6,032,307,556 | 512 | 435.63M (7) | 5.87M (303) | 390368 | 2021-10-15 | SAMN12623617 | PRJNA749575 | G10K | fish | ||
| cunner | Tautogolabrus adspersus (2) | GCA_020745675.1_fTauAds1.alt.cur | 695,716,069 | 1,476 | 992.54K (208) | 992.54K (208) | 34787 | 2021-11-05 | SAMN22589422 | PRJNA774879 | Vertebrate Genomes Project | fish | ||
| cunner | Tautogolabrus adspersus (2) | GCA_020745685.1_fTauAds1.pri.cur | 723,582,185 | 64 | 31.69M (11) | 7.92M (27) | 34787 | 2021-11-05 | SAMN22589422 | PRJNA774878 | Vertebrate Genomes Project | fish | ||
| bony fishes | Seriola aureovittata (2) | GCA_021018895.1_ASM2101889v1 | 647,095,223 | 31 | 28.52M (11) | 17.99M (14) | 2871759 | 2021-12-02 | SAMN20750612 | PRJNA754209 | Yellow Sea Fisheries Research Institute | fish | ||
| Atlantic chub mackerel | Scomber colias (2) | GCA_021039105.1_S.colias_p1.0 | 814,072,382 | 2,028 | 4.19M (47) | 3.32M (59) | 338315 | 2021-12-03 | SAMN22141988 | PRJNA769550 | CIIMAR - Interdisciplinary Centre of Marine and Environmental Research | fish | ||
| Atlantic chub mackerel | Scomber colias (2) | GCA_021039115.1_S.colias_a1.0 | 807,935,773 | 5,909 | 466.02K (460) | 465.39K (461) | 338315 | 2021-12-03 | SAMN22141988 | PRJNA770180 | CIIMAR - Interdisciplinary Centre of Marine and Environmental Research | fish | ||
| view | smallmouth bass | Micropterus dolomieu (2) | GCF_021292245.1_ASM2129224v1 | 829,587,215 | 15,020 | 34.17M (11) | 147949 | 2022-01-11 | SAMN22851699 | PRJNA777359 | Cornell University | fish | ||
| view | dark-edged splitfin | Girardinichthys multiradiatus (3) | GCF_021462225.1_DD_fGirMul_XY1 | 1,150,004,004 | 72 | 47.42M (12) | EN | n/a | n/a | n/a | fish | |||
| view | delta smelt | Hypomesus transpacificus (3) | GCF_021917145.1_fHypTra1 | 437,273,953 | 376 | 14.85M (13) | CR | n/a | n/a | n/a | fish | |||
| view | flathead mullet | Mugil cephalus (2) | GCF_022458985.1_CIBA_Mcephalus_1.1 | 634,849,760 | 24 | 28.33M (10) | n/a | n/a | n/a | fish | ||||
| derbio | Trachinotus ovatus (3) | GCA_900231065.1_golden_pompano_genome_number_1 | 652,811,564 | 6,737 | 1.67M (112) | 173.31K (1,081) | 173339 | 2018-05-03 | SAMEA104304869 | PRJEB22654 | South China Sea Fisheries Research Institute | fish | ||
| derbio | Trachinotus ovatus (3) | GCA_900607315.1_golden_pompano_genome_assembly_version_2 | 648,062,395 | 138 | 29.49M (10) | 1.85M (107) | 173339 | 2018-12-02 | SAMEA104304870 | PRJEB22654 | South China Sea Fisheries Research Institute | fish | ||
| blackfin icefish | Chaenocephalus aceratus (2) | GCA_900302675.1_ASM90030267v1 | 623,452,208 | 114,963 | 7.33K (24,303) | 5.46K (33,749) | 36190 | 2018-03-19 | SAMEA4028820 | PRJEB12469 | CEES | fish | ||
| ballan wrasse | Labrus bergylta (2) | GCA_900080235.1_BallGen_V1 | 805,480,521 | 13,466 | 794.65K (252) | 703.85K (282) | 56723 | 2016-05-03 | SAMEA3939555 | PRJEB13687 | National Institute of nutrition and seafood research | fish | ||
| view | ballan wrasse | Labrus bergylta (2) | GCF_900080235.1_BallGen_V1 | 805,480,521 | 13,466 | 794.65K (252) | 703.85K (282) | 56723 | 2016-05-03 | SAMEA3939555 | PRJEB13687 | National Institute of nutrition and seafood research | fish | |
| Amur ide | Leuciscus waleckii | GCA_900092035.1_Amur_ide_genome | 752,538,629 | 4,888 | 21.96M (14) | 38.88K (5,488) | 155063 | 2016-06-28 | SAMEA3723233 | PRJEB12292 | CHINESE ACADEMY OF FISHERY SCIENCE | fish | ||
| eastern happy | Astatotilapia calliptera (6) | GCA_900246225.5_fAstCal1.3 | 880,445,568 | 249 | 38.67M (10) | 4.44M (58) | 8154 | 2021-04-24 | SAMEA104026430 | PRJEB24325 | Wellcome Sanger Institute | fish | ||
| view | eastern happy | Astatotilapia calliptera (6) | GCF_900246225.1_fAstCal1.2 | 880,445,564 | 249 | 38.67M (10) | 38.67M (10) | 8154 | 2018-05-30 | SAMEA104026430 | PRJEB24325 | SC | fish | |
| eastern happy | Astatotilapia calliptera (6) | GCA_900246225.1_fAstCal1.1 | 883,159,802 | 338 | 12.52M (19) | 8154 | 2018-1-17 | SC | fish | |||||
| eastern happy | Astatotilapia calliptera (6) | GCA_900246225.2_fAstCal1.2 | 880,428,986 | 248 | 38.67M (10) | 8154 | 2018-5-3 | SC | fish | |||||
| eastern happy | Astatotilapia calliptera (6) | GCA_900246225.3_fAstCal1.2 | 880,428,986 | 248 | 38.67M (10) | 4.44M (58) | 8154 | 2018-05-30 | SC | fish | ||||
| haddock | Melanogrammus aeglefinus (2) | GCA_900291075.1_MAEA_1 | 652,790,733 | 8,420 | 209.13K (880) | 77.61K (2,164) | VU | 8056 | 2018-03-19 | SAMEA104602249 | PRJEB25074 | CEES | fish | |
| haddock | Melanogrammus aeglefinus (2) | GCA_900302525.1_ASM90030252v1 | 374,396,471 | 123,841 | 3.70K (29,062) | 3.21K (34,484) | VU | 8056 | 2018-03-18 | SAMEA4028796 | PRJEB12469 | CEES | fish | |
| European smelt | Osmerus eperlanus | GCA_900302275.1_ASM90030227v1 | 342,758,722 | 73,274 | 6.82K (13,136) | 4.52K (21,102) | 29151 | 2018-03-18 | SAMEA4028764 | PRJEB12469 | CEES | fish | ||
| sand roller | Percopsis transmontana | GCA_900302285.1_ASM90030228v1 | 458,089,168 | 53,197 | 15.18K (8,399) | 8.16K (15,620) | 143327 | 2018-03-20 | SAMEA4028770 | PRJEB12469 | CEES | fish | ||
| bony fishes | Parasudis fraserbrunneri | GCA_900302295.1_ASM90030229v1 | 707,987,062 | 156,389 | 6.39K (29,834) | 4.18K (48,295) | 1784818 | 2018-03-21 | SAMEA4028766 | PRJEB12469 | CEES | fish | ||
| silver eye | Polymixia japonica | GCA_900302305.1_ASM90030230v1 | 554,895,936 | 92,198 | 9.57K (15,491) | 5.80K (26,369) | 81385 | 2018-03-19 | SAMEA4028769 | PRJEB12469 | CEES | fish | ||
| bony fishes | Phycis blennoides | GCA_900302315.1_ASM90030231v1 | 416,766,999 | 62,684 | 10.64K (10,452) | 4.53K (26,495) | 163115 | 2018-03-18 | SAMEA4028788 | PRJEB12469 | CEES | fish | ||
| marbled moray cod | Muraenolepis marmorata | GCA_900302325.1_ASM90030232v1 | 416,390,766 | 138,928 | 3.56K (34,159) | 3.13K (40,397) | 487677 | 2018-03-19 | SAMEA4028780 | PRJEB12469 | CEES | fish | ||
| bony fishes | Phycis phycis | GCA_900302335.1_ASM90030233v1 | 346,335,180 | 100,771 | 4.50K (20,807) | 3.46K (28,032) | 349666 | 2018-03-18 | SAMEA4028789 | PRJEB12469 | CEES | fish | ||
| arrowtail | Melanonus zugmayeri | GCA_900302345.1_ASM90030234v1 | 432,902,915 | 82,409 | 7.63K (16,031) | 4.56K (28,301) | 181410 | 2018-03-19 | SAMEA4028779 | PRJEB12469 | CEES | fish | ||
| rosy dory | Cyttopsis rosea | GCA_900302355.1_ASM90030235v1 | 546,506,150 | 111,974 | 7.08K (22,272) | 4.84K (32,861) | 1176755 | 2018-03-19 | SAMEA4028773 | PRJEB12469 | CEES | fish | ||
| onion-eye grenadier | Macrourus berglax | GCA_900302365.1_ASM90030236v1 | 399,875,629 | 118,318 | 4.29K (25,731) | 3.35K (34,434) | 473319 | 2018-03-18 | SAMEA4028786 | PRJEB12469 | CEES | fish | ||
| Vaillant's grenadier | Bathygadus melanobranchus | GCA_900302375.1_ASM90030237v1 | 431,202,967 | 92,290 | 6.48K (18,714) | 4.96K (24,850) | 630650 | 2018-03-19 | SAMEA4028785 | PRJEB12469 | CEES | fish | ||
| burbot | Lota lota | GCA_900302385.1_ASM90030238v1 | 397,499,185 | 106,616 | 4.89K (22,647) | 3.80K (29,979) | 69944 | 2018-03-18 | SAMEA4028790 | PRJEB12469 | CEES | fish | ||
| striped codlet | Bregmaceros cantori | GCA_900302395.1_ASM90030239v1 | 1,144,104,325 | 258,566 | 5.92K (55,826) | 4.45K (76,072) | 630652 | 2018-03-30 | SAMEA4028775 | PRJEB12469 | CEES | fish | ||
| southern cavefish | Typhlichthys subterraneus | GCA_900302405.1_ASM90030240v1 | 555,559,596 | 84,841 | 9.65K (16,257) | 7.31K (21,843) | 940470 | 2018-03-19 | SAMEA4028771 | PRJEB12469 | CEES | fish | ||
| poor cod | Trisopterus minutus | GCA_900302415.1_ASM90030241v1 | 334,717,091 | 106,116 | 3.98K (23,200) | 3.25K (29,454) | 80722 | 2018-03-18 | SAMEA4028793 | PRJEB12469 | CEES | fish | ||
| tusk | Brosme brosme | GCA_900302425.1_ASM90030242v1 | 412,731,310 | 114,910 | 4.65K (25,121) | 3.68K (32,557) | 81638 | 2018-03-18 | SAMEA4028792 | PRJEB12469 | CEES | fish | ||
| bony fishes | Boreogadus saida | GCA_900302515.1_ASM90030251v1 | 412,070,465 | 137,701 | 3.57K (33,190) | 3.22K (37,597) | 44932 | 2018-03-19 | SAMEA4028799 | PRJEB12469 | CEES | fish | ||
| Sammara squirrelfish | Neoniphon sammara | GCA_900302535.1_ASM90030253v1 | 659,225,728 | 56,655 | 21.77K (8,327) | 8.76K (21,165) | 47706 | 2018-03-21 | SAMEA4028807 | PRJEB12469 | CEES | fish | ||
| North Atlantic opah | Lampris guttatus | GCA_900302545.1_ASM90030254v1 | 849,277,706 | 208,230 | 5.22K (48,204) | 4.05K (64,342) | 81370 | 2018-03-30 | SAMEA4028803 | PRJEB12469 | CEES | fish | ||
| blackbar soldierfish | Myripristis jacobus | GCA_900302555.1_ASM90030255v1 | 720,396,841 | 64,974 | 21.31K (8,990) | 9.82K (20,149) | 371672 | 2018-03-21 | SAMEA4028805 | PRJEB12469 | CEES | fish | ||
| walleye pollock | Gadus chalcogrammus | GCA_900302575.1_ASM90030257v1 | 448,868,398 | 130,159 | 4.33K (29,443) | 3.60K (36,583) | 1042646 | 2018-03-19 | SAMEA4028800 | PRJEB12469 | CEES | fish | ||
| king of herrings | Regalecus glesne | GCA_900302585.1_ASM90030258v1 | 656,003,707 | 105,196 | 9.77K (18,554) | 6.78K (26,563) | 81389 | 2018-03-20 | SAMEA4028802 | PRJEB12469 | CEES | fish | ||
| silvery cod | Gadiculus argenteus | GCA_900302595.1_ASM90030259v1 | 396,767,394 | 123,363 | 3.95K (28,434) | 3.38K (34,334) | 185737 | 2018-03-18 | SAMEA4028794 | PRJEB12469 | CEES | fish | ||
| redmouth whalefish | Rondeletia loricata | GCA_900302605.1_ASM90030260v1 | 568,597,941 | 103,827 | 7.47K (21,535) | 5.11K (32,758) | 88713 | 2018-03-19 | SAMEA4028809 | PRJEB12469 | CEES | fish | ||
| longspine squirrelfish | Holocentrus rufus | GCA_900302615.1_ASM90030261v1 | 649,757,301 | 58,113 | 21.39K (8,035) | 9.24K (19,587) | 722565 | 2018-03-19 | SAMEA4028806 | PRJEB12469 | CEES | fish | ||
| yellowfin tuna | Thunnus albacares (4) | GCA_900302625.1_ASM90030262v1 | 728,212,003 | 38,995 | 46.92K (4,284) | 16.81K (12,005) | 8236 | 2018-03-21 | SAMEA4028815 | PRJEB12469 | CEES | fish | ||
| yellowfin tuna | Thunnus albacares (4) | GCA_914725855.1_fThuAlb1.1 | 792,117,861 | 69 | 34.62M (11) | 26.80M (13) | 8236 | 2021-09-16 | SAMEA8654749 | PRJEB47267 | WELLCOME SANGER INSTITUTE | fish | ||
| yellowfin tuna | Thunnus albacares (4) | GCA_914744365.1_fThuAlb1.1_alternate_haplotype | 786,643,039 | 640 | 4.12M (55) | 8236 | 2021-09-15 | SAMEA8654749 | PRJEB47266 | WELLCOME SANGER INSTITUTE | fish | |||
| view | yellowfin tuna | Thunnus albacares (4) | GCF_914725855.1_fThuAlb1.1 | 792,101,331 | 68 | 34.62M (11) | 26.80M (13) | 8236 | 2021-09-16 | SAMEA8654749 | PRJEB47267 | WELLCOME SANGER INSTITUTE | fish | |
| pony toadfish | Chatrabus melanurus | GCA_900302635.1_ASM90030263v1 | 1,128,442,880 | 238,795 | 5.92K (58,949) | 4.58K (79,001) | 990972 | 2018-03-30 | SAMEA4028814 | PRJEB12469 | CEES | fish | ||
| golden redfish | Sebastes norvegicus | GCA_900302655.1_ASM90030265v1 | 717,740,616 | 75,627 | 16.56K (12,160) | 9.47K (21,610) | 394699 | 2018-03-21 | SAMEA4028819 | PRJEB12469 | CEES | fish | ||
| climbing perch | Anabas testudineus (7) | GCA_900302665.1_ASM90030266v1 | 524,844,595 | 23,072 | 50.23K (2,932) | 18.82K (7,873) | 64144 | 2018-03-19 | SAMEA4028826 | PRJEB12469 | CEES | fish | ||
| climbing perch | Anabas testudineus (7) | GCA_900324465.3_fAnaTes1.3 | 555,658,509 | 51 | 25.06M (10) | 7.06M (25) | 64144 | 2021-04-24 | SAMEA104026376 | PRJEB25768 | Wellcome Sanger Institute | fish | ||
| view | climbing perch | Anabas testudineus (7) | GCA_900650485.1_fAnaTes1.2_alternate_haplotype | 539,091,056 | 2,641 | 1.10M (126) | 1.06M (131) | 64144 | 2019-02-07 | SAMEA104026376 | PRJEB30391 | SC | fish | |
| view | climbing perch | Anabas testudineus (7) | GCF_900324465.2_fAnaTes1.2 | 555,658,001 | 51 | 25.06M (10) | 7.06M (25) | 64144 | 2018-12-19 | SAMEA104026376 | PRJEB25768 | SC | fish | |
| climbing perch | Anabas testudineus (7) | GCA_900324465.1_fAnaTes1.1 | 569,705,464 | 69 | 26.09M (8) | 64144 | 2018-3-31 | SC | fish | |||||
| view | climbing perch | Anabas testudineus (7) | GCA_900324465.2_fAnaTes1.2 | 555,641,398 | 50 | 25.06M (10) | 7.06M (25) | 64144 | 2018-12-19 | SC | fish | |||
| view | climbing perch | Anabas testudineus (7) | GCF_900324465.1_fAnaTes1.1 | 569,722,067 | 70 | 26.09M (8) | 7.06M (25) | 64144 | 2018-03-31 | SC | fish | |||
| black seabream | Spondyliosoma cantharus | GCA_900302685.1_ASM90030268v1 | 680,472,139 | 47,064 | 28.20K (6,727) | 11.63K (16,594) | 50595 | 2018-03-21 | SAMEA4028822 | PRJEB12469 | CEES | fish | ||
| kissing gourami | Helostoma temminkii | GCA_900302695.1_ASM90030269v1 | 599,808,025 | 21,407 | 71.79K (2,358) | 17.05K (10,298) | 243708 | 2018-03-19 | SAMEA4028825 | PRJEB12469 | CEES | fish | ||
| rock-pool blenny | Parablennius parvicornis | GCA_900302745.1_ASM90030274v1 | 599,249,148 | 66,539 | 16.80K (9,968) | 7.34K (22,740) | 171872 | 2018-03-19 | SAMEA4028827 | PRJEB12469 | CEES | fish | ||
| damselfish | Chromis chromis | GCA_900302755.1_ASM90030275v1 | 834,429,411 | 104,482 | 14.22K (15,626) | 8.51K (26,179) | 91607 | 2018-03-21 | SAMEA4028828 | PRJEB12469 | CEES | fish | ||
| bony fishes | Mora moro | GCA_900303205.1_Mora_mora_assembly | 344,961,111 | 100,621 | 4.43K (21,715) | 3.27K (30,833) | 248765 | 2018-03-18 | SAMEA4028783 | PRJEB12469 | CEES | fish | ||
| roughsnout grenadier | Trachyrincus scabrus | GCA_900303215.1_ASM90030321v1 | 369,861,760 | 80,958 | 6.38K (16,040) | 3.90K (27,981) | 562814 | 2018-03-18 | SAMEA4028781 | PRJEB12469 | CEES | fish | ||
| bony fishes | Laemonema laureysi | GCA_900303225.1_ASM90030322v1 | 306,494,646 | 86,525 | 4.71K (17,751) | 3.43K (25,626) | 1784819 | 2018-03-18 | SAMEA4028784 | PRJEB12469 | CEES | fish | ||
| Arctic cod | Arctogadus glacialis | GCA_900303235.1_ASM90030323v1 | 428,791,846 | 139,389 | 3.70K (33,796) | 3.28K (39,035) | 185735 | 2018-03-19 | SAMEA4028798 | PRJEB12469 | CEES | fish | ||
| African moonfish | Selene dorsalis | GCA_900303245.1_ASM90030324v1 | 528,779,420 | 36,113 | 32.46K (4,476) | 11.21K (13,259) | 179366 | 2018-03-19 | SAMEA4028824 | PRJEB12469 | CEES | fish | ||
| Sanzo's goby | Lesueurigobius sanzi | GCA_900303255.1_ASM90030325v1 | 810,626,388 | 130,360 | 11.48K (17,610) | 6.73K (32,639) | 1365564 | 2018-03-21 | SAMEA4028816 | PRJEB12469 | CEES | fish | ||
| bearded brotula | Brotula barbata | GCA_900303265.1_ASM90030326v1 | 485,061,200 | 29,854 | 45.75K (2,629) | 17.58K (6,959) | 432164 | 2018-03-20 | SAMEA4028811 | PRJEB12469 | CEES | fish | ||
| striated frogfish | Antennarius striatus | GCA_900303275.1_ASM90030327v1 | 441,856,641 | 70,398 | 9.77K (12,643) | 6.09K (20,841) | 241820 | 2018-03-19 | SAMEA4028823 | PRJEB12469 | CEES | fish | ||
| European hake | Merluccius merluccius | GCA_900312545.1_ASM90031254v1 | 401,034,705 | 102,914 | 5.12K (23,010) | 3.67K (33,330) | 8063 | 2018-03-18 | SAMEA4028777 | PRJEB12469 | CEES | fish | ||
| bony fishes | Lamprogrammus exutus | GCA_900312555.1_ASM90031255v1 | 492,850,272 | 120,937 | 5.47K (26,071) | 4.21K (35,620) | 1592065 | 2018-03-20 | SAMEA4028812 | PRJEB12469 | CEES | fish | ||
| splendid alfonsino | Beryx splendens | GCA_900312565.1_ASM90031256v1 | 533,267,752 | 117,400 | 5.99K (25,206) | 4.29K (38,104) | 88663 | 2018-03-19 | SAMEA4028808 | PRJEB12469 | CEES | fish | ||
| pricklefish | Acanthochaenus luetkenii | GCA_900312575.1_ASM90031257v1 | 545,759,480 | 91,087 | 8.44K (18,336) | 5.64K (28,704) | 473344 | 2018-03-19 | SAMEA4028810 | PRJEB12469 | CEES | fish | ||
| western softhead grenadier | Malacocephalus occidentalis | GCA_900312585.1_ASM90031258v1 | 350,339,566 | 95,829 | 4.93K (19,033) | 3.70K (26,310) | 630739 | 2018-03-18 | SAMEA4028787 | PRJEB12469 | CEES | fish | ||
| highfin tadpole fish | Guentherus altivela | GCA_900312595.1_ASM90031259v1 | 539,598,795 | 189,411 | 3.20K (56,740) | 2.93K (64,416) | 1263181 | 2018-03-19 | SAMEA4028767 | PRJEB12469 | CEES | fish | ||
| tube-eye | Stylephorus chordatus | GCA_900312615.1_ASM90031261v1 | 488,488,587 | 128,468 | 4.68K (31,365) | 3.37K (46,922) | 409996 | 2018-03-20 | SAMEA4028774 | PRJEB12469 | CEES | fish | ||
| Benguela hake | Merluccius polli | GCA_900312625.1_ASM90031262v1 | 401,149,128 | 113,894 | 4.48K (26,399) | 3.47K (35,231) | 89951 | 2018-03-18 | SAMEA4028776 | PRJEB12469 | CEES | fish | ||
| saithe | Pollachius virens | GCA_900312635.1_ASM90031263v1 | 394,927,939 | 116,705 | 4.34K (25,595) | 3.46K (33,111) | 8060 | 2018-03-18 | SAMEA4028795 | PRJEB12469 | CEES | fish | ||
| pearlfish | Carapus acus | GCA_900312935.1_ASM90031293v1 | 387,834,307 | 46,699 | 16.92K (5,649) | 9.55K (9,769) | 1491482 | 2018-03-18 | SAMEA4028813 | PRJEB12469 | CEES | fish | ||
| shallow-water Cape hake | Merluccius capensis | GCA_900312945.1_ASM90031294v1 | 414,317,329 | 110,925 | 4.77K (25,325) | 3.79K (32,916) | 89947 | 2018-03-18 | SAMEA4028778 | PRJEB12469 | CEES | fish | ||
| shorthorn sculpin | Myoxocephalus scorpius | GCA_900312955.1_ASM90031295v1 | 520,316,443 | 85,863 | 9.47K (15,068) | 5.72K (25,735) | 8097 | 2018-03-19 | SAMEA4028818 | PRJEB12469 | CEES | fish | ||
| ling | Molva molva | GCA_900323295.1_ASM90032329v1 | 437,480,619 | 111,875 | 5.27K (23,129) | 4.14K (29,992) | 163112 | 2018-03-26 | SAMEA4028791 | PRJEB12469 | CEES | fish | ||
| roughnose grenadier | Trachyrincus murrayi | GCA_900323305.1_ASM90032330v1 | 452,416,606 | 40,927 | 20.00K (6,139) | 6.23K (20,528) | 241836 | 2018-03-26 | SAMEA4028782 | PRJEB12469 | CEES | fish | ||
| large-eye snaggletooth | Borostomias antarcticus | GCA_900323325.1_ASM90032332v1 | 430,362,827 | 104,734 | 5.37K (22,749) | 3.93K (33,030) | 473354 | 2018-03-26 | SAMEA4028765 | PRJEB12469 | CEES | fish | ||
| John dory | Zeus faber | GCA_900323335.1_ASM90032333v1 | 610,433,400 | 135,758 | 6.33K (28,334) | 4.64K (39,015) | 64108 | 2018-03-26 | SAMEA4028772 | PRJEB12469 | CEES | fish | ||
| brown dottyback | Pseudochromis fuscus | GCA_900323345.1_ASM90032334v1 | 657,041,210 | 52,042 | 24.69K (7,168) | 12.03K (15,265) | 280673 | 2018-03-26 | SAMEA4028829 | PRJEB12469 | CEES | fish | ||
| whiting | Merlangius merlangus | GCA_900323355.1_ASM90032335v1 | 423,942,190 | 122,642 | 4.44K (27,175) | 3.54K (35,308) | 8058 | 2018-03-26 | SAMEA4028797 | PRJEB12469 | CEES | fish | ||
| pineconefish | Monocentris japonicus | GCA_900323365.1_ASM90032336v1 | 556,023,515 | 52,108 | 18.67K (8,168) | 8.05K (19,610) | 181435 | 2018-03-26 | SAMEA4028804 | PRJEB12469 | CEES | fish | ||
| glacier lanternfish | Benthosema glaciale | GCA_900323375.1_ASM90032337v1 | 676,314,385 | 143,923 | 6.11K (32,112) | 4.39K (47,821) | 125796 | 2018-03-26 | SAMEA4028768 | PRJEB12469 | CEES | fish | ||
| bony fishes | Danionella dracula | GCA_900490495.1_fDanDra1.1 | 665,208,374 | 996 | 10.29M (20) | 2.30M (85) | 623740 | 2018-07-01 | SAMEA104026433 | PRJEB27320 | SC | fish | ||
| orange-spotted grouper | Epinephelus coioides | GCA_900536245.1_Grouper | 1,023,559,032 | 1,450 | 2.57M (117) | 2.49M (118) | 94232 | 2019-12-05 | SAMEA4836213 | PRJEB28248 | CNGB | fish | ||
| barred hamlet | Hypoplectrus puella | GCA_900610375.1_HP_genome_unmasked_01 | 612,290,098 | 14,375 | 24.21M (12) | 22.58K (7,375) | 146810 | 2018-12-12 | SAMEA4799755 | PRJEB27858 | GEOMAR Helmholtz Centre for Ocean Research Kiel | fish | ||
| view | bony fishes | Cottoperca gobio (3) | GCA_900634415.1_fCotGob3.1 | 609,391,784 | 322 | 25.16M (11) | 6.33M (27) | 56716 | 2019-02-06 | SAMEA104242975 | PRJEB30248 | SC | fish | |
| view | bony fishes | Cottoperca gobio (3) | GCA_900634435.1_fCotGob3.1_alternate_haplotype | 671,265,480 | 11,555 | 107.59K (1,402) | 107.52K (1,403) | 56716 | 2019-02-07 | SAMEA104242975 | PRJEB30256 | SC | fish | |
| view | bony fishes | Cottoperca gobio (3) | GCF_900634415.1_fCotGob3.1 | 609,391,784 | 322 | 25.16M (11) | 25.16M (11) | 56716 | 2019-02-06 | SAMEA104242975 | PRJEB30248 | SC | fish | |
| Indian glassy fish | Parambassis ranga (4) | GCA_900634625.2_fParRan2.2 | 551,029,983 | 157 | 22.99M (10) | 5.08M (31) | 210632 | 2020-07-31 | SAMEA4675621 | PRJEB30257 | SC | fish | ||
| view | Indian glassy fish | Parambassis ranga (4) | GCA_900651595.1_fParRan2.1_alternate_haplotype | 486,545,135 | 2,242 | 417.10K (306) | 409.59K (316) | 210632 | 2019-02-12 | SAMEA4675621 | PRJEB30258 | SC | fish | |
| view | Indian glassy fish | Parambassis ranga (4) | GCF_900634625.1_fParRan2.1 | 551,012,959 | 156 | 22.99M (10) | 22.99M (10) | 210632 | 2019-02-06 | SAMEA4675621 | PRJEB30257 | SC | fish | |
| Indian glassy fish | Parambassis ranga (4) | GCA_900634625.1_fParRan2.1 | 551,012,959 | 156 | 22.99M (10) | 5.08M (31) | 210632 | 2019-02-06 | SC | fish | ||||
| blunt-snouted clingfish | Gouania willdenowi (4) | GCA_900634775.2_fGouWil2.2 | 937,169,869 | 442 | 38.98M (11) | 1.84M (132) | 441366 | 2020-07-31 | SAMEA104026382 | PRJEB30359 | SC | fish | ||
| view | blunt-snouted clingfish | Gouania willdenowi (4) | GCA_900650505.1_fGouWil2.1_alternate_haplotype | 759,272,921 | 7,674 | 173.85K (1,237) | 173.85K (1,237) | 441366 | 2019-02-07 | SAMEA104026382 | PRJEB30360 | SC | fish | |
| view | blunt-snouted clingfish | Gouania willdenowi (4) | GCF_900634775.1_fGouWil2.1 | 937,150,793 | 441 | 38.98M (11) | 38.98M (11) | 441366 | 2019-02-06 | SAMEA104026382 | PRJEB30359 | SC | fish | |
| view | blunt-snouted clingfish | Gouania willdenowi (4) | GCA_900634775.1_fGouWil2.1 | 937,150,793 | 441 | 38.98M (11) | 1.84M (132) | 441366 | 2019-02-06 | SC | fish | |||
| silver spinyfin | Diretmus argenteus | GCA_900660295.1_Diretmus_argenteus_assembly | 302,363,458 | 107,968 | 3.37K (26,942) | 2.17K (47,683) | 88682 | 2019-06-15 | SAMEA5226238 | PRJEB30779 | CEES | fish | ||
| bony fishes | Cetomimus sp. NI1144 | GCA_900660305.1_Opsanus_beta_assembly | 404,871,927 | 133,451 | 3.57K (34,939) | 2.69K (50,821) | 115865 | 2019-06-15 | SAMEA5226236 | PRJEB30779 | CEES | fish | ||
| bony fishes | Diretmoides pauciradiatus | GCA_900660315.1_Diretmoides_pauciradiatus_assembly | 672,603,014 | 147,686 | 6.03K (31,890) | 4.03K (50,999) | 1415272 | 2019-06-19 | SAMEA5226239 | PRJEB30779 | CEES | fish | ||
| Gulf toadfish | Opsanus beta | GCA_900660325.1_Opsanus_beta_assembly | 1,028,783,780 | 345,629 | 3.33K (102,692) | 3.06K (114,487) | 95145 | 2019-06-19 | SAMEA5226235 | PRJEB30779 | CEES | fish | ||
| orange roughy | Hoplostethus atlanticus | GCA_900660355.1_Hoplostethus_atlanticus_assembly | 520,173,038 | 58,279 | 15.56K (8,896) | 7.81K (18,099) | 96778 | 2019-06-18 | SAMEA5226241 | PRJEB30779 | CEES | fish | ||
| Darwin's slimehead | Gephyroberyx darwinii | GCA_900660455.1_Gephyroberyx_darwinii_assembly | 535,045,983 | 55,277 | 18.14K (7,842) | 8.51K (16,932) | 334984 | 2019-06-18 | SAMEA5226240 | PRJEB30779 | CEES | fish | ||
| common fangtooth | Anoplogaster cornuta | GCA_900683385.1_Anoplogaster_cornuta_assembly | 404,844,788 | 108,625 | 4.56K (26,603) | 3.72K (34,878) | 88656 | 2019-06-15 | SAMEA5226237 | PRJEB30779 | CEES | fish | ||
| view | denticle herring | Denticeps clupeoides (4) | GCA_900700345.2_fDenClu1.1_alternate_haplotype | 457,704,509 | 1,972 | 384.27K (334) | 384.27K (334) | VU | 299321 | 2019-03-27 | SAMEA104129917 | PRJEB31546 | SC | fish |
| denticle herring | Denticeps clupeoides (4) | GCA_900700375.2_fDenClu1.2 | 567,417,970 | 461 | 22.79M (9) | 3.06M (53) | VU | 299321 | 2020-07-31 | SAMEA104129917 | PRJEB31545 | SC | fish | |
| view | denticle herring | Denticeps clupeoides (4) | GCF_900700375.1_fDenClu1.1 | 567,401,054 | 460 | 22.79M (9) | 22.79M (9) | VU | 299321 | 2019-03-16 | SAMEA104129917 | PRJEB31545 | SC | fish |
| denticle herring | Denticeps clupeoides (4) | GCA_900700375.1_fDenClu1.1 | 567,401,054 | 460 | 22.79M (9) | 3.06M (53) | VU | 299321 | 2019-03-16 | SC | fish | |||
| view | zig-zag eel | n/a | GCA_900700395.1_fMasArm1.2_alternate_haplotype | 43,703,874 | 1,437 | 33.45K (293) | 205130 | 2019-04-01 | SAMEA104026378 | PRJEB31553 | SC | fish | ||
| view | reedfish | Erpetoichthys calabaricus (7) | GCA_900700845.2_fErpCal1.1_alternate_haplotype | 2,607,661,443 | 38,593 | 98.43K (7,806) | 98.42K (7,807) | 27687 | 2019-03-27 | SC | fish | |||
| reedfish | Erpetoichthys calabaricus (7) | GCA_900700845.3_fErpCal1.3_alternate_haplotype | 3,014,944,822 | 17,082 | 262.49K (3,437) | 262.35K (3,447) | 27687 | 2021-07-07 | SAMEA104026374 | PRJEB31582 | Wellcome Sanger Institute | fish | ||
| reedfish | Erpetoichthys calabaricus (7) | GCA_900747795.4_fErpCal1.3 | 3,613,551,089 | 169 | 217.69M (6) | 6.77M (155) | 27687 | 2021-07-07 | SAMEA104026374 | PRJEB31579 | Wellcome Sanger Institute | fish | ||
| view | reedfish | Erpetoichthys calabaricus (7) | GCF_900747795.1_fErpCal1.1 | 3,811,038,701 | 1,885 | 199.23M (7) | 199.23M (7) | 27687 | 2019-03-26 | SAMEA104026374 | PRJEB31579 | SC | fish | |
| live sharksucker | Echeneis naucrates (4) | GCA_900963305.2_fEcheNa1.2 | 544,229,243 | 38 | 23.29M (11) | 12.37M (17) | 173247 | 2021-04-24 | SAMEA4966390 | PRJEB31992 | Wellcome Sanger Institute | fish | ||
| view | live sharksucker | Echeneis naucrates (4) | GCA_900963505.1_fEcheNa1.1_alternate_haplotype | 528,272,450 | 1,405 | 915.46K (149) | 889.30K (158) | 173247 | 2019-04-11 | SAMEA4966390 | PRJEB31993 | SC | fish | |
| view | live sharksucker | Echeneis naucrates (4) | GCF_900963305.1_fEcheNa1.1 | 544,229,245 | 38 | 23.29M (11) | 23.29M (11) | 173247 | 2019-04-11 | SAMEA4966390 | PRJEB31992 | SC | fish | |
| live sharksucker | Echeneis naucrates (4) | GCA_900963305.1_fEcheNa1.1 | 544,212,633 | 37 | 23.29M (11) | 12.37M (17) | 173247 | 2019-04-11 | SC | fish | ||||
| river trout | Salmo trutta (4) | GCA_901001165.2_fSalTru1.2 | 2,371,880,186 | 1,441 | 52.21M (18) | 1.70M (294) | 8032 | 2021-04-24 | SAMEA994732 | PRJEB32115 | Wellcome Sanger Institute | fish | ||
| view | river trout | Salmo trutta (4) | GCF_901001165.1_fSalTru1.1 | 2,371,880,186 | 1,441 | 52.21M (18) | 52.21M (18) | 8032 | 2019-06-02 | SAMEA994732 | PRJEB32115 | SC | fish | |
| river trout | Salmo trutta (4) | GCA_901001165.1_fSalTru1.1 | 2,371,863,509 | 1,440 | 52.21M (18) | 1.70M (294) | 8032 | 2019-06-02 | SC | fish | ||||
| razorfish | Aeoliscus strigatus | GCA_901007665.1_Aeoliscus_strigatus_assembly | 381,315,519 | 8,858 | 115.78K (881) | 15.94K (6,738) | 270546 | 2020-04-15 | SAMEA5563349 | PRJEB32126 | CEES | fish | ||
| cornetfish | Fistularia tabacaria | GCA_901007705.1_Fistularia_tabacaria_assembly | 593,175,436 | 38,736 | 107.23K (1,406) | 17.67K (8,638) | 1046056 | 2020-04-15 | SAMEA5563353 | PRJEB32126 | CEES | fish | ||
| flying gurnard | Dactylopterus volitans | GCA_901007715.1_Dactylopterus_volitans_assembly | 576,982,700 | 52,263 | 17.10K (9,316) | 8.27K (20,181) | 94924 | 2020-04-15 | SAMEA5563350 | PRJEB32126 | CEES | fish | ||
| spotted seahorse | Hippocampus kuda | GCA_901007745.1_Hippocampus_kuda_assembly | 444,947,940 | 27,749 | 31.19K (3,788) | 10.41K (11,742) | VU | 103715 | 2020-04-15 | SAMEA5563355 | PRJEB32126 | CEES | fish | |
| ringed pipefish | Dunckerocampus dactyliophorus | GCA_901007775.1_Doryramphus_dactylophorus_assembly | 618,747,239 | 20,547 | 75.19K (2,075) | 27.59K (6,244) | 161453 | 2020-04-15 | SAMEA5563351 | PRJEB32126 | CEES | fish | ||
| snake pipefish | Entelurus aequoreus | GCA_901007785.1_Entelurus_aequoreus_assembly | 556,773,907 | 159,670 | 3.92K (44,358) | 3.39K (55,315) | 161455 | 2020-04-15 | SAMEA5563352 | PRJEB32126 | CEES | fish | ||
| White's seahorse | Hippocampus whitei | GCA_901007805.1_Hippocampus_whitei_assembly | 432,755,118 | 23,135 | 40.76K (2,873) | 10.33K (11,885) | EN | 109292 | 2020-04-15 | SAMEA5563354 | PRJEB32126 | CEES | fish | |
| striped red mullet | Mullus surmuletus (2) | GCA_901007815.1_Mullus_surmuletus_assembly | 469,313,838 | 43,383 | 17.18K (7,479) | 7.24K (19,245) | 87757 | 2020-04-15 | SAMEA5563357 | PRJEB32126 | CEES | fish | ||
| striped red mullet | Mullus surmuletus (2) | GCA_903171835.1_mullus_surmuletus_genome | 533,324,175 | 2,674 | 482.94K (313) | 8.44K (16,743) | 87757 | 2020-06-05 | SAMEA6813210 | PRJEB38135 | UMR5175 | fish | ||
| longspine snipefish | Macroramphosus scolopax | GCA_901007825.1_Macroramphorus_scolopax_assembly | 417,659,696 | 20,568 | 41.79K (2,665) | 13.37K (8,553) | 206124 | 2020-04-15 | SAMEA5563356 | PRJEB32126 | CEES | fish | ||
| Nilsson's pipefish | Syngnathus rostellatus | GCA_901007895.1_Syngnathus_rostellatus_assembly | 283,186,098 | 11,738 | 87.57K (829) | 14.95K (5,248) | 161589 | 2020-04-15 | SAMEA5563359 | PRJEB32126 | CEES | fish | ||
| straightnose pipefish | Nerophis ophidion | GCA_901007905.1_Nerophis_ophidion_assembly | 976,361,201 | 193,953 | 6.84K (41,537) | 5.25K (55,563) | 159077 | 2020-04-15 | SAMEA5563358 | PRJEB32126 | CEES | fish | ||
| broad-nosed pipefish | Syngnathus typhle | GCA_901007915.1_Syngnathus_typhle_assembly | 314,580,961 | 914 | 3.05M (30) | 25.81K (3,106) | 161592 | 2020-04-15 | SAMEA5563360 | PRJEB32126 | CEES | fish | ||
| greater pipefish | Syngnathus acus (4) | GCA_901709675.2_fSynAcu1.2 | 324,347,687 | 88 | 14.97M (8) | 11.96M (11) | 161584 | 2020-07-31 | SAMEA104381750 | PRJEB32741 | SC | fish | ||
| view | greater pipefish | Syngnathus acus (4) | GCA_901709685.1_fSynAcu1.1_alternate_haplotype | 234,858,432 | 1,848 | 170.06K (407) | 169.50K (407) | 161584 | 2019-06-02 | SAMEA104381750 | PRJEB32742 | SC | fish | |
| view | greater pipefish | Syngnathus acus (4) | GCF_901709675.1_fSynAcu1.2 | 324,331,233 | 87 | 14.97M (8) | 11.96M (11) | 161584 | 2020-07-31 | SAMEA104381750 | PRJEB32741 | SC | fish | |
| view | greater pipefish | Syngnathus acus (4) | GCA_901709675.1_fSynAcu1.1 | 324,331,233 | 87 | 14.97M (8) | 11.96M (11) | 161584 | 2019-05-29 | SC | fish | |||
| view | pinecone soldierfish | Myripristis murdjan (3) | GCA_902148815.1_fMyrMur1.1_alternate_haplotype | 819,084,930 | 2,193 | 612.30K (353) | 612.30K (354) | 586833 | 2019-07-03 | SAMEA4872133 | PRJEB33187 | SC | fish | |
| pinecone soldierfish | Myripristis murdjan (3) | GCA_902150065.1_fMyrMur1.1 | 835,254,674 | 87 | 34.95M (11) | 14.48M (20) | 586833 | 2019-07-03 | SAMEA4872133 | PRJEB33188 | SC | fish | ||
| view | pinecone soldierfish | Myripristis murdjan (3) | GCF_902150065.1_fMyrMur1.1 | 835,254,674 | 87 | 34.95M (11) | 14.48M (20) | 586833 | 2019-07-03 | SAMEA4872133 | PRJEB33188 | SC | fish | |
| view | orbiculate cardinalfish | Sphaeramia orbicularis (3) | GCA_902148825.1_fSphaOr1.1_alternate_haplotype | 1,135,435,641 | 6,896 | 249.01K (1,274) | 246.06K (1,286) | 375764 | 2019-07-03 | SAMEA4966328 | PRJEB33176 | SC | fish | |
| orbiculate cardinalfish | Sphaeramia orbicularis (3) | GCA_902148855.1_fSphaOr1.1 | 1,342,662,642 | 340 | 57.17M (11) | 2.36M (148) | 375764 | 2019-07-03 | SAMEA4966328 | PRJEB33177 | SC | fish | ||
| view | orbiculate cardinalfish | Sphaeramia orbicularis (3) | GCF_902148855.1_fSphaOr1.1 | 1,342,662,642 | 340 | 57.17M (11) | 2.36M (148) | 375764 | 2019-07-03 | SAMEA4966328 | PRJEB33177 | SC | fish | |
| view | jewelled blenny | Salarias fasciatus (3) | GCA_902148835.1_fSalaFa1.1_alternate_haplotype | 894,675,777 | 4,516 | 424.59K (606) | 421.53K (610) | 181472 | 2019-07-03 | SAMEA4966329 | PRJEB33183 | SC | fish | |
| jewelled blenny | Salarias fasciatus (3) | GCA_902148845.1_fSalaFa1.1 | 797,490,645 | 202 | 32.73M (11) | 2.60M (86) | 181472 | 2019-07-03 | SAMEA4966329 | PRJEB33184 | SC | fish | ||
| view | jewelled blenny | Salarias fasciatus (3) | GCF_902148845.1_fSalaFa1.1 | 797,507,141 | 203 | 32.73M (11) | 2.60M (86) | 181472 | 2019-07-03 | SAMEA4966329 | PRJEB33184 | SC | fish | |
| view | bony fishes | Thalassophryne amazonica (3) | GCA_902500245.1_fThaAma1.1_alternate_haplotype | 1,767,810,094 | 19,579 | 119.21K (4,594) | 119.17K (4,595) | 390379 | 2019-09-30 | SAMEA104129913 | PRJEB34605 | SC | fish | |
| view | bony fishes | Thalassophryne amazonica (3) | GCA_902500255.1_fThaAma1.1 | 2,446,592,878 | 464 | 118.42M (9) | 2.33M (310) | 390379 | 2019-09-30 | SAMEA104129913 | PRJEB34606 | SC | fish | |
| view | bony fishes | Thalassophryne amazonica (3) | GCF_902500255.1_fThaAma1.1 | 2,446,592,878 | 464 | 118.42M (9) | 2.33M (310) | 390379 | 2019-09-30 | SAMEA104129913 | PRJEB34606 | SC | fish | |
| bony fishes | Neostethus bicornis (2) | GCA_902685365.1_fNeoBic2.1_alternate_haplotype | 747,174,145 | 1,483 | 961.05K (215) | 960.77K (215) | 300306 | 2019-11-26 | SAMEA104240207 | PRJEB35382 | SC | fish | ||
| bony fishes | Neostethus bicornis (2) | GCA_902685375.1_fNeoBic2.1 | 778,440,790 | 107 | 29.12M (12) | 23.09M (14) | 300306 | 2019-11-26 | SAMEA104240207 | PRJEB35383 | SC | fish | ||
| view | sterlet | Acipenser ruthenus (8) | GCA_902713425.1_fAciRut3.1_maternal_haplotype | 1,638,742,712 | 245 | 43.12M (11) | 10.83M (48) | VU | 7906 | 2020-01-08 | SAMEA5572864 | PRJEB35912 | SC | fish |
| sterlet | Acipenser ruthenus (8) | GCA_004119895.1_ASM411989v1 | 1,732,545,901 | 215,913 | 219.75K (1,560) | 24.38K (16,582) | VU | 7906 | 2019-01-30 | SAMN10088814 | PRJNA491785 | Yangtze River Fisheries Research Institute, Chinese Academy of Fishery Sciences | fish | |
| sterlet | Acipenser ruthenus (8) | GCA_010645085.1_ASM1064508v1 | 1,830,484,458 | 3,403 | 42.36M (12) | 601.14K (837) | VU | 7906 | 2020-02-19 | SAMN12612932 | PRJNA561280 | University of Wuerzburg | fish | |
| view | sterlet | Acipenser ruthenus (8) | GCF_010645085.1_ASM1064508v1 | 1,830,501,248 | 3,404 | 42.36M (12) | 601.14K (837) | VU | 7906 | 2020-02-19 | SAMN12612932 | PRJNA561280 | University of Wuerzburg | fish |
| view | sterlet | Acipenser ruthenus (8) | GCA_902713435.1_fAciRut3.1_paternal_haplotype | 1,663,879,616 | 224 | 42.54M (11) | 11.50M (45) | VU | 7906 | 2020-01-08 | SC | fish | ||
| bony fishes | Coregonus sp. 'balchen' (2) | GCA_902810595.1_AWG_v2 | 2,068,074,305 | 40 | 52.02M (17) | 533.13K (966) | 861768 | 2020-03-10 | SAMEA5807383 | PRJEB33097 | EAWAG | fish | ||
| Antarctic spiny plunderfish | Harpagifer antarcticus (2) | GCA_902827095.1_fHarAnt1.1_alternate_haplotype | 908,431,605 | 8,105 | 167.20K (1,635) | 157.92K (1,739) | 43256 | 2020-04-15 | SAMEA104132831 | PRJEB37644 | SC | fish | ||
| Antarctic spiny plunderfish | Harpagifer antarcticus (2) | GCA_902827135.1_fHarAnt1.1 | 941,503,312 | 1,541 | 5.00M (54) | 1.05M (246) | 43256 | 2020-04-15 | SAMEA104132831 | PRJEB37645 | SC | fish | ||
| emerald rockcod | Trematomus bernacchii (3) | GCA_902827105.1_fTreBer1.1_alternate_haplotype | 950,296,928 | 7,825 | 190.31K (1,368) | 176.54K (1,490) | 40690 | 2020-04-15 | SAMEA104132834 | PRJEB37641 | SC | fish | ||
| emerald rockcod | Trematomus bernacchii (3) | GCA_902827165.1_fTreBer1.1 | 867,125,071 | 864 | 8.75M (27) | 1.40M (160) | 40690 | 2020-04-15 | SAMEA104132834 | PRJEB37642 | SC | fish | ||
| view | emerald rockcod | Trematomus bernacchii (3) | GCF_902827165.1_fTreBer1.1 | 867,125,071 | 864 | 8.75M (27) | 1.40M (160) | 40690 | 2020-04-15 | SAMEA104132834 | PRJEB37642 | SC | fish | |
| South Georgia icefish | Pseudochaenichthys georgianus (3) | GCA_902827115.1_fPseGeo1.1 | 1,026,101,545 | 1,563 | 42.83M (11) | 661.28K (431) | 52239 | 2020-04-15 | SAMEA104132832 | PRJEB37648 | SC | fish | ||
| South Georgia icefish | Pseudochaenichthys georgianus (3) | GCA_902827155.1_fPseGeo1.1_alternate_haplotype | 340,895,399 | 10,597 | 38.28K (2,639) | 36.56K (2,992) | 52239 | 2020-04-15 | SAMEA104132832 | PRJEB37647 | SC | fish | ||
| view | South Georgia icefish | Pseudochaenichthys georgianus (3) | GCF_902827115.1_fPseGeo1.1 | 1,026,101,545 | 1,563 | 42.83M (11) | 661.28K (431) | 52239 | 2020-04-15 | SAMEA104132832 | PRJEB37648 | SC | fish | |
| bony fishes | Gymnodraco acuticeps (3) | GCA_902827175.1_fGymAcu1.1 | 996,888,495 | 2,618 | 1.92M (132) | 534.68K (503) | 8218 | 2020-04-15 | SAMEA104242997 | PRJEB37639 | SC | fish | ||
| bony fishes | Gymnodraco acuticeps (3) | GCA_902827185.1_fGymAcu1.1_alternate_haplotype | 945,243,511 | 11,489 | 118.97K (2,366) | 112.15K (2,527) | 8218 | 2020-04-15 | SAMEA104242997 | PRJEB37638 | SC | fish | ||
| view | bony fishes | Gymnodraco acuticeps (3) | GCF_902827175.1_fGymAcu1.1 | 996,888,495 | 2,618 | 1.92M (132) | 534.68K (503) | 8218 | 2020-04-15 | SAMEA104242997 | PRJEB37639 | SC | fish | |
| bony fishes | Phalloptychus januarius | GCA_902982915.1_HVK001 | 603,731,518 | 588 | 13.34M (15) | 417465 | 2021-09-22 | SAMEA6809756 | PRJEB37697 | WAGENINGEN UNIVERSITY | fish | |||
| capelin | Mallotus villosus | GCA_903064625.1_Mallotus_villosus_assembly | 490,877,849 | 5,904 | 236.99K (510) | 229.62K (521) | 30960 | 2020-05-18 | SAMEA6813208 | PRJEB38139 | CEES | fish | ||
| bony fishes | Brachyrhaphis roseni | GCA_903066815.1_HVK_BR_001 | 646,914,198 | 79,525 | 41.69K (4,279) | 41.65K (4,280) | 51562 | 2021-09-22 | SAMEA6814940 | PRJEB37697 | WAGENINGEN UNIVERSITY | fish | ||
| bony fishes | Alfaro cultratus | GCA_903066825.1_HVK_AC_001 | 639,540,724 | 32,348 | 57.40K (3,285) | 56.52K (3,328) | 55102 | 2021-09-22 | SAMEA6814939 | PRJEB37697 | WAGENINGEN UNIVERSITY | fish | ||
| blackstripe livebearer | Poeciliopsis prolifica | GCA_903067045.1_HVK_PP_001 | 593,285,568 | 74,755 | 38.58K (4,334) | 38.56K (4,335) | 188132 | 2021-09-22 | SAMEA6814950 | PRJEB37697 | WAGENINGEN UNIVERSITY | fish | ||
| bony fishes | Poeciliopsis paucimaculata | GCA_903067055.1_HVK_PPA_001 | 643,974,302 | 104,205 | 65.10K (2,844) | 65.09K (2,844) | EN | 188130 | 2021-09-22 | SAMEA6814947 | PRJEB37697 | WAGENINGEN UNIVERSITY | fish | |
| bony fishes | Brachyrhaphis terrabensis | GCA_903067065.1_HVK_BT_001 | 667,929,605 | 317,432 | 6.41K (15,611) | 6.37K (15,667) | 51563 | 2021-09-22 | SAMEA6814941 | PRJEB37697 | WAGENINGEN UNIVERSITY | fish | ||
| bony fishes | Micropoecilia bifurca | GCA_903067075.1_HVK_MB_001 | 705,096,005 | 200,009 | 21.35K (8,668) | 21.33K (8,673) | 69812 | 2021-09-22 | SAMEA6814943 | PRJEB37697 | WAGENINGEN UNIVERSITY | fish | ||
| porthole livebearer | Poeciliopsis gracilis | GCA_903067085.1_HVK_PG_001 | 594,430,629 | 83,076 | 36.71K (4,335) | 36.67K (4,338) | 119849 | 2021-09-22 | SAMEA6814945 | PRJEB37697 | WAGENINGEN UNIVERSITY | fish | ||
| metallic livebearer | Girardinus metallicus | GCA_903067095.1_HVK_GM_001 | 674,367,140 | 101,868 | 41.81K (4,660) | 41.81K (4,660) | 55106 | 2021-09-22 | SAMEA6814942 | PRJEB37697 | WAGENINGEN UNIVERSITY | fish | ||
| Lerma livebearer | Poeciliopsis infans | GCA_903067105.1_HVK_PI_001 | 582,637,719 | 29,401 | 59.59K (2,819) | 59.27K (2,832) | 188128 | 2021-09-22 | SAMEA6814946 | PRJEB37697 | WAGENINGEN UNIVERSITY | fish | ||
| swamp guppy | Micropoecilia picta (2) | GCA_903067115.1_HVK_PPI_001 | 674,271,405 | 86,160 | 22.07K (8,403) | 22.07K (8,405) | 69234 | 2021-09-22 | SAMEA6814948 | PRJEB37697 | WAGENINGEN UNIVERSITY | fish | ||
| swamp guppy | Micropoecilia picta (2) | GCA_905332405.1_picta_flye_male | 737,314,582 | 1,946 | 3.33M (59) | 69234 | 2021-06-25 | SAMEA8117521 | PRJEB43222 | University of Edinburgh | fish | |||
| Sinaloa livebearer | Poeciliopsis presidionis | GCA_903068095.1_HVK_PPR_001 | 591,876,328 | 66,018 | 38.71K (4,466) | 38.66K (4,470) | 188131 | 2021-09-22 | SAMEA6814949 | PRJEB37697 | WAGENINGEN UNIVERSITY | fish | ||
| bony fishes | Poecilia wingei | GCA_903068105.1_HVK_PW_001 | 698,351,719 | 176,690 | 16.68K (11,245) | 16.67K (11,249) | 679340 | 2021-09-22 | SAMEA6814952 | PRJEB37697 | WAGENINGEN UNIVERSITY | fish | ||
| Gill's molly | Poecilia gillii | GCA_903068115.1_HVK_PGI_001 | 671,821,890 | 124,442 | 25.85K (7,168) | 25.82K (7,171) | 69226 | 2021-09-22 | SAMEA6814944 | PRJEB37697 | WAGENINGEN UNIVERSITY | fish | ||
| blackspotted livebearer | Poeciliopsis turneri (2) | GCA_903068135.1_HVK_PTN_001 | 595,112,802 | 75,206 | 40.88K (4,176) | 37.86K (4,501) | 188135 | 2021-09-22 | SAMEA6814951 | PRJEB37697 | WAGENINGEN UNIVERSITY | fish | ||
| white seabream | Diplodus sargus | GCA_903131615.1_diplodus_sargus_genome | 784,049,296 | 2,161 | 3.41M (57) | 27.46K (8,046) | 38941 | 2020-06-05 | SAMEA6813209 | PRJEB38135 | UMR5175 | fish | ||
| comber | Serranus cabrilla | GCA_903364295.1_serranus_cabrilla_genome | 630,578,932 | 3,170 | 610.90K (354) | 21.56K (7,774) | 94953 | 2020-06-05 | SAMEA6813211 | PRJEB38135 | UMR5175 | fish | ||
| pearl danio | Danio albolineatus | GCA_903798035.1_fDanAlb1.1 | 1,463,018,096 | 40,406 | 4.63M (83) | 18.83K (18,481) | 27699 | 2020-06-16 | SAMEA104026392 | PRJEB38565 | SC | fish | ||
| bony fishes | Danio jaintianensis | GCA_903798115.1_fDanJai1.1 | 1,122,503,336 | 19,951 | 18.17M (21) | 22.55K (12,565) | VU | 1982067 | 2020-06-16 | SAMEA104026422 | PRJEB38569 | SC | fish | |
| bony fishes | Danio choprai | GCA_903798125.1_fDanCho1.1 | 1,102,162,037 | 56,986 | 5.71M (51) | 13.93K (18,073) | 299714 | 2020-06-16 | SAMEA104026429 | PRJEB38567 | SC | fish | ||
| bony fishes | Danio aesculapii (2) | GCA_903798135.1_fDanAes4.1_alternate_haplotype | 1,212,462,820 | 6,676 | 278.72K (1,339) | 278.60K (1,341) | 1142201 | 2020-06-16 | SAMEA104240212 | PRJEB38582 | SC | fish | ||
| bony fishes | Danio aesculapii (2) | GCA_903798145.1_fDanAes4.1 | 1,381,485,597 | 342 | 56.00M (12) | 1.52M (252) | 1142201 | 2020-06-27 | SAMEA104240212 | PRJEB38583 | SC | fish | ||
| bony fishes | Danio kyathit (2) | GCA_903798155.1_fDanKya3.1_alternate_haplotype | 1,550,397,046 | 6,250 | 420.08K (1,109) | 419.19K (1,111) | 242068 | 2020-06-16 | SAMEA104130240 | PRJEB38579 | SC | fish | ||
| bony fishes | Danio kyathit (2) | GCA_903798195.1_fDanKya3.1 | 1,708,446,541 | 739 | 64.23M (12) | 1.26M (376) | 242068 | 2020-06-27 | SAMEA104130240 | PRJEB38580 | SC | fish | ||
| gold ring danio | Danio tinwini | GCA_903798205.1_fDanTin1.1 | 1,497,358,328 | 35,277 | 13.58M (34) | 16.68K (22,110) | 1093597 | 2020-06-16 | SAMEA104026413 | PRJEB38571 | SC | fish | ||
| guppy | Poecilia reticulata (4) | GCA_904066995.1_PRET-male-REFERENCE | 697,709,266 | 23 | 32.83M (10) | 8.20M (27) | 8081 | 2020-09-16 | SAMEA6533017 | PRJEB36704 | UNIVERSITY OF EXETER | fish | ||
| guppy | Poecilia reticulata (4) | GCA_000633615.2_Guppy_female_1.0_MT | 731,622,281 | 2,768 | 5.27M (43) | 41.91K (4,424) | 8081 | 2014-04-28 | Max Planck Institute for Developmental Biology | fish | ||||
| view | guppy | Poecilia reticulata (4) | GCF_000633615.1_Guppy_female_1.0_MT | 731,622,281 | 2,768 | 5.27M (43) | 41.91K (4,424) | 8081 | 2014-04-28 | Max Planck Institute for Developmental Biology | fish | |||
| Atlantic horse mackerel | Trachurus trachurus (4) | GCA_905171655.2_fTraTra1.2_alternate_haplotype | 797,027,743 | 1,049 | 1.65M (143) | 1.58M (146) | VU | 36212 | 2021-11-26 | SAMEA7524396 | PRJEB42173 | Wellcome Sanger Institute | fish | |
| Atlantic horse mackerel | Trachurus trachurus (4) | GCA_905171665.2_fTraTra1.2 | 801,243,942 | 153 | 35.45M (11) | 6.49M (35) | VU | 36212 | 2021-11-26 | SAMEA7524396 | PRJEB42172 | Wellcome Sanger Institute | fish | |
| Atlantic horse mackerel | Trachurus trachurus (4) | GCA_905171655.1_fTraTra1.1_alternate_haplotype | 818,939,194 | 1,185 | 1.61M (149) | 1.55M (153) | VU | 36212 | 2021-01-28 | SC | fish | |||
| Atlantic horse mackerel | Trachurus trachurus (4) | GCA_905171665.1_fTraTra1.1 | 820,163,303 | 219 | 35.45M (11) | 6.26M (37) | VU | 36212 | 2021-01-28 | Wellcome Sanger Institute | fish | |||
| common carp | Cyprinus carpio carpio | GCA_905221575.1_Cypcar_WagV4.0 | 1,460,348,793 | 674 | 28.47M (22) | 9.24M (51) | VU | 630221 | 2021-06-27 | SAMEA7997750 | PRJEB42985 | WAGENINGEN UR | fish | |
| Atlantic silverside | Menidia menidia (2) | GCA_905332855.1_Menidia_menidia_CT_1.0 | 508,735,381 | 62,811 | 1.56M (79) | 7.96K (14,505) | 238744 | 2021-03-21 | SAMEA8193155 | PRJEB43421 | Cornell University | fish | ||
| Atlantic silverside | Menidia menidia (2) | GCA_907169785.1_Menidia_menidia_GA_1.0 | 620,036,635 | 42,220 | 18.20M (15) | 44.27K (2,869) | 238744 | 2021-05-15 | SAMEA8193140 | PRJEB43421 | Cornell University | fish | ||
| common whitefish | Coregonus lavaretus | GCA_905477555.1_ML_MAG_01 | 862,866 | 97 | 21.17K (13) | VU | 59291 | 2021-04-15 | SAMEA7494070 | PRJEB40990 | CENTER FOR EVOLUTIONARY HOLOGENOMICS | fish | ||
| bony fishes | Taurulus bubalis (2) | GCA_910589325.1_fTauBub2.1_alternate_haplotype | 614,755,631 | 1,778 | 883.97K (212) | 61643 | 2021-07-07 | SAMEA7522994 | PRJEB45316 | WELLCOME SANGER INSTITUTE | fish | |||
| bony fishes | Taurulus bubalis (2) | GCA_910589615.1_fTauBub2.1 | 615,153,901 | 27 | 29.14M (9) | 13.04M (18) | 61643 | 2021-07-07 | SAMEA7522994 | PRJEB45317 | WELLCOME SANGER INSTITUTE | fish | ||
| rock gunnel | Pholis gunnellus (4) | GCA_910591455.2_fPhoGun1.2 | 588,696,950 | 101 | 25.36M (11) | 3.52M (51) | 56726 | 2021-11-18 | SAMEA7522838 | PRJEB45449 | WELLCOME SANGER INSTITUTE | fish | ||
| rock gunnel | Pholis gunnellus (4) | GCA_910591705.2_fPhoGun1.2_alternate_haplotype | 590,303,236 | 2,165 | 640.68K (252) | 640.68K (252) | 56726 | 2021-11-18 | SAMEA7522838 | PRJEB45448 | WELLCOME SANGER INSTITUTE | fish | ||
| rock gunnel | Pholis gunnellus (4) | GCA_910591455.1_fPhoGun1.1 | 588,730,976 | 102 | 25.36M (11) | 3.52M (51) | 56726 | 2021-07-07 | WELLCOME SANGER INSTITUTE | fish | ||||
| rock gunnel | Pholis gunnellus (4) | GCA_910591705.1_fPhoGun1.1_alternate_haplotype | 590,303,236 | 2,165 | 640.68K (252) | 640.68K (252) | 56726 | 2021-07-07 | WELLCOME SANGER INSTITUTE | fish | ||||
| southern bluefin tuna | Thunnus maccoyii (3) | GCA_910596085.1_fThuMac1.1_alternate_haplotype | 782,574,410 | 895 | 2.44M (94) | EN | 8240 | 2021-07-07 | SAMEA8654747 | PRJEB46020 | Wellcome Sanger Institute | fish | ||
| southern bluefin tuna | Thunnus maccoyii (3) | GCA_910596095.1_fThuMac1.1 | 782,423,977 | 58 | 33.76M (11) | 26.80M (13) | EN | 8240 | 2021-07-07 | SAMEA8654747 | PRJEB46021 | Wellcome Sanger Institute | fish | |
| view | southern bluefin tuna | Thunnus maccoyii (3) | GCF_910596095.1_fThuMac1.1 | 782,423,979 | 58 | 33.76M (11) | 26.80M (13) | EN | 8240 | 2021-07-07 | SAMEA8654747 | PRJEB46021 | Wellcome Sanger Institute | fish |
| silver-cheeked toadfish | Lagocephalus sceleratus | GCA_911728415.1_Lsceleratus_genome.fasta | 373,990,197 | 241 | 11.30M (15) | 229057 | 2021-11-19 | SAMEA8994838 | PRJEB46605 | Hellenic Centre for Marine Research, Institute for Marine Biology, Biotechnology and Aquaculture, Heraklion, Crete, Greece | fish | |||
| bony fishes | Helicolenus avius | GCA_916700675.1_H-avius_MM3 | 343,527,933 | 40,369 | 8.60K (13,687) | 7.95K (14,718) | 394686 | 2021-10-06 | SAMEA7962315 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| Aleutian scorpionfish | Adelosebastes latens | GCA_916700685.1_A_latens_148487 | 832,469,038 | 70,293 | 53.18K (4,355) | 29.80K (7,679) | 1311530 | 2021-10-09 | SAMEA7962314 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| rosethorn rockfish | Sebastes helvomaculatus | GCA_916700695.1_S-helvomaculatus_KUI479 | 800,919,275 | 48,677 | 64.81K (3,561) | 44.38K (5,197) | 72079 | 2021-11-12 | SAMEA7962347 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| buccaneer rockfish | Sebastes exsul | GCA_916700705.1_S-exsul_SEB-BAJA-1 | 789,914,691 | 45,053 | 78.54K (2,836) | 44.44K (5,063) | 72075 | 2021-11-12 | SAMEA7962342 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| darkblotched rockfish | Sebastes crameri (2) | GCA_916700715.1_S-crameri_SEB-6 | 804,123,545 | 37,776 | 90.50K (2,492) | 65.85K (3,415) | 72067 | 2021-11-12 | SAMEA7962334 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| darkblotched rockfish | Sebastes crameri (2) | GCA_916700755.1_S-crameri_SEB-4 | 801,889,896 | 37,945 | 94.77K (2,374) | 66.82K (3,373) | 72067 | 2021-11-12 | SAMEA7962333 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| calico rockfish | Sebastes dallii | GCA_916700725.1_S-dalli_xSEB-31 | 849,191,471 | 77,234 | 131.15K (1,742) | 73.96K (3,122) | 394690 | 2021-10-09 | SAMEA7992531 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| chilipepper | Sebastes goodei | GCA_916700735.1_S-goodei_SEB-148 | 766,499,479 | 56,716 | 38.04K (5,738) | 26.61K (8,259) | 72078 | 2021-11-12 | SAMEA7962346 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| bony fishes | Sebastes cheni | GCA_916700745.1_S_cheni_135386 | 781,405,488 | 30,655 | 126.84K (1,755) | 78.19K (2,819) | 1738870 | 2021-11-12 | SAMEA7962329 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| Acadian redfish | Sebastes fasciatus | GCA_916700765.1_S-fasciatus_KUI2796 | 796,284,246 | 44,608 | 67.60K (3,372) | 47.98K (4,812) | EN | 394691 | 2021-11-12 | SAMEA7962343 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | |
| widow rockfish | Sebastes entomelas (2) | GCA_916700775.1_S-entomelas_SEB-8 | 801,786,131 | 35,359 | 123.81K (1,849) | 88.92K (2,573) | 72073 | 2021-11-12 | SAMEA7962341 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| widow rockfish | Sebastes entomelas (2) | GCA_916701365.1_S-entomelas_SEB-16 | 793,250,275 | 34,820 | 102.91K (2,132) | 72.88K (3,064) | 72073 | 2021-11-13 | SAMEA7962340 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| yellowtain rockfish | Sebastes flavidus | GCA_916700785.1_S-flavidus_SEB-19 | 803,706,445 | 41,332 | 98.26K (2,311) | 60.41K (3,740) | 72076 | 2021-10-07 | SAMEA7962344 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| bony fishes | Sebastes glaucus | GCA_916700795.1_S_glaucus_134638 | 781,172,899 | 57,209 | 43.61K (5,027) | 31.09K (7,068) | 201702 | 2021-10-07 | SAMEA7962345 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| dusky rockfish | Sebastes ciliatus | GCA_916700805.1_S-ciliatus_KUI2032 | 812,770,900 | 64,374 | 53.64K (4,065) | 38.30K (5,747) | 72065 | 2021-10-09 | SAMEA7962331 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| bony fishes | Helicolenus hilgendorfi | GCA_916700815.1_H-hilgendorfii_KUI10868 | 481,359,663 | 48,222 | 10.61K (14,480) | 9.47K (16,155) | 143344 | 2021-11-12 | SAMEA7962316 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| Pacific ocean perch | Sebastes alutus | GCA_916700825.1_S-alutus_KUI2069 | 793,687,741 | 60,864 | 46.44K (4,747) | 29.84K (7,528) | 72055 | 2021-10-09 | SAMEA7962320 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| bony fishes | Sebastes baramenuke | GCA_916700835.1_S_baramenuke_131606 | 809,143,364 | 51,421 | 68.89K (3,156) | 41.63K (5,368) | 214491 | 2021-11-12 | SAMEA7962325 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| copper rockfish | Sebastes caurinus | GCA_916700845.1_S-caurinus_SEB-191 | 780,142,603 | 52,396 | 50.20K (4,313) | 33.80K (6,514) | 72063 | 2021-11-13 | SAMEA7962328 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| gopher rockfish | Sebastes carnatus | GCA_916700855.1_S-carnatus_xSEB-21 | 784,640,190 | 49,734 | 62.27K (3,503) | 37.52K (5,852) | 72062 | 2021-11-12 | SAMEA7962327 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| redbanded rockfish | Sebastes babcocki | GCA_916700865.1_S-babcocki_HO-4 | 784,606,613 | 41,621 | 68.93K (3,236) | 46.07K (4,937) | 72059 | 2021-11-12 | SAMEA7962324 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| splitnose rockfish | Sebastes diploproa | GCA_916700885.1_S-diploproa_KUI2154 | 790,597,977 | 44,860 | 68.70K (3,344) | 45.59K (5,038) | 72069 | 2021-11-13 | SAMEA7962336 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| starry rockfish | Sebastes constellatus | GCA_916700895.1_S-constellatus_SEB-71 | 800,515,964 | 40,444 | 111.04K (2,030) | 67.71K (3,361) | 72066 | 2021-11-12 | SAMEA7962332 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| aurora rockfish | Sebastes aurora | GCA_916700905.1_S-aurora_KUI448 | 795,546,944 | 41,684 | 76.47K (2,974) | 54.97K (4,143) | 72058 | 2021-11-13 | SAMEA7962323 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| greenspotted rockfish | Sebastes chlorostictus | GCA_916700915.1_S-chlorostictus_xSEB-10 | 805,126,900 | 39,429 | 111.88K (2,072) | 67.01K (3,413) | 72064 | 2021-11-12 | SAMEA7962330 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| greenstriped rockfish | Sebastes elongatus | GCA_916700925.1_S-elongatus_SEB-146 | 783,285,582 | 52,628 | 46.33K (4,785) | 32.06K (6,910) | 72070 | 2021-11-12 | SAMEA7962337 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| bony fishes | Hozukius emblemarius | GCA_916700935.1_H_emblemarius_134878 | 834,246,755 | 75,637 | 41.08K (5,694) | 23.43K (9,765) | 201712 | 2021-10-09 | SAMEA7962317 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| deacon rockfish | Sebastes diaconus | GCA_916700945.1_S-diaconus_SEB-21 | 826,466,321 | 88,363 | 159.24K (1,447) | 78.87K (2,848) | 2603974 | 2021-10-09 | SAMEA7962335 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| kelp rockfish | Sebastes atrovirens | GCA_916700955.1_S-atrovirens_xSEB-24 | 802,451,845 | 42,583 | 102.08K (2,177) | 63.94K (3,465) | 72056 | 2021-11-12 | SAMEA7962321 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| swordspine rockfish | Sebastes ensifer | GCA_916700965.1_S-ensifer_SEB-163 | 791,387,913 | 52,002 | 66.16K (3,314) | 35.84K (6,239) | 72072 | 2021-11-13 | SAMEA7962338 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| brown rockfish | Sebastes auriculatus | GCA_916700975.1_S-auriculatus_S-1A | 794,792,569 | 44,053 | 77.71K (2,842) | 58.16K (3,795) | 72057 | 2021-11-12 | SAMEA7962322 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| shortraker rockfish | Sebastes borealis | GCA_916700985.1_S-borealis_KUI2095 | 466,167,128 | 48,043 | 10.21K (14,854) | 9.55K (15,828) | 394687 | 2021-11-12 | SAMEA7962326 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| bony fishes | Hozukius guyotensis | GCA_916700995.1_H_guyotensis_138486 | 835,738,012 | 71,567 | 43.44K (5,294) | 27.17K (8,451) | 2802376 | 2021-10-09 | SAMEA7962318 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| vermillion rockfish | Sebastes miniatus (3) | GCA_916701005.1_S-miniatus_SEB-153 | 793,482,038 | 32,757 | 97.63K (2,346) | 65.24K (3,508) | 72087 | 2021-11-13 | SAMEA7962365 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| vermillion rockfish | Sebastes miniatus (3) | GCA_916701115.1_S-miniatus_SEB-11 | 793,511,601 | 36,608 | 87.49K (2,514) | 61.74K (3,620) | 72087 | 2021-11-13 | SAMEA7962364 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| vermillion rockfish | Sebastes miniatus (3) | GCA_916701275.1_S-miniatus_SEB-74 | 850,744,298 | 568 | 33.12M (12) | 8.56M (30) | 72087 | 2021-09-30 | SAMEA7962367 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| bony fishes | Sebastes iracundus | GCA_916701015.1_S_iracundus_136139 | 813,246,135 | 62,216 | 51.02K (4,390) | 31.45K (7,122) | 214493 | 2021-10-09 | SAMEA7962351 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| bony fishes | Sebastes matsubarae | GCA_916701035.1_S_matsubarae_146680 | 809,139,827 | 53,122 | 59.27K (3,888) | 39.22K (5,809) | 201704 | 2021-11-13 | SAMEA7962360 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| bocaccio | Sebastes paucispinis | GCA_916701045.1_S-paucispinis_SEB-180 | 773,410,464 | 38,736 | 63.89K (3,493) | 48.33K (4,649) | 72093 | 2021-11-13 | SAMEA7962382 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| China rockfish | Sebastes nebulosus | GCA_916701055.1_S_nebulosus_SEB-720 | 788,231,101 | 46,438 | 65.10K (3,312) | 47.15K (4,686) | 394698 | 2021-11-13 | SAMEA7962373 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| canary rockfish | Sebastes pinniger (2) | GCA_916701065.1_S-pinniger_SEB-72 | 796,536,647 | 32,532 | 108.42K (2,098) | 80.24K (2,813) | 72094 | 2021-11-13 | SAMEA7962384 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| canary rockfish | Sebastes pinniger (2) | GCA_916701255.1_S-pinniger_SEB-75 | 790,080,651 | 29,320 | 148.29K (1,558) | 95.89K (2,326) | 72094 | 2021-11-13 | SAMEA7962385 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| bony fishes | Sebastes pachycephalus | GCA_916701075.1_S_pachycephalus_137687 | 791,064,454 | 40,087 | 101.08K (2,157) | 67.31K (3,233) | 201706 | 2021-10-07 | SAMEA7962381 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| bony fishes | Sebastes inermis | GCA_916701085.1_S_inermis_136187 | 778,668,614 | 30,091 | 127.91K (1,728) | 74.84K (2,937) | 160818 | 2021-11-13 | SAMEA7962350 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| bony fishes | Sebastes oblongus | GCA_916701095.1_S_oblongus_137157 | 775,773,698 | 29,733 | 89.45K (2,478) | 62.13K (3,585) | 201705 | 2021-11-13 | SAMEA7962377 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| bony fishes | Sebastes joyneri | GCA_916701105.1_S_joyneri_137149 | 780,419,780 | 31,967 | 107.78K (2,017) | 70.64K (3,120) | 160817 | 2021-10-07 | SAMEA7962354 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| Patagonian redfish | Sebastes oculatus (3) | GCA_916701125.1_S-oculatus_ER03 | 797,882,259 | 38,089 | 86.60K (2,654) | 62.78K (3,631) | 72091 | 2021-11-13 | SAMEA7962378 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| Patagonian redfish | Sebastes oculatus (3) | GCA_916701155.1_S-oculatus_PAR11 | 789,830,903 | 44,333 | 70.39K (3,188) | 48.19K (4,642) | 72091 | 2021-11-18 | SAMEA7962380 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| Patagonian redfish | Sebastes oculatus (3) | GCA_916701355.1_S-oculatus_IQ03 | 800,901,959 | 43,998 | 70.03K (3,341) | 53.95K (4,275) | 72091 | 2021-11-13 | SAMEA7962379 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| bony fishes | Sebastes kiyomatsui | GCA_916701135.1_S_kiyomatsui_145871 | 782,654,133 | 42,917 | 73.57K (2,968) | 47.55K (4,666) | 394692 | 2021-10-07 | SAMEA7962355 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| whitespeckled rockfish | Sebastes moseri (2) | GCA_916701145.1_S-moseri_SEB-5 | 788,643,476 | 51,357 | 53.15K (4,170) | 39.83K (5,580) | 394697 | 2021-11-13 | SAMEA7962369 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| whitespeckled rockfish | Sebastes moseri (2) | GCA_916701315.1_S-moseri_SEB-9 | 792,942,029 | 35,936 | 124.80K (1,779) | 83.07K (2,653) | 394697 | 2021-10-07 | SAMEA7962370 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| blackgill rockfish | Sebastes melanostomus | GCA_916701165.1_S-melanostomus_HO-5 | 791,179,900 | 39,720 | 76.38K (2,955) | 51.23K (4,376) | 72086 | 2021-11-13 | SAMEA7962362 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| quillback rockfish | Sebastes maliger (2) | GCA_916701175.1_S-maliger_KUI3233 | 785,579,304 | 48,599 | 61.29K (3,545) | 38.98K (5,590) | 72084 | 2021-11-13 | SAMEA7962358 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| quillback rockfish | Sebastes maliger (2) | GCA_916701265.1_S_maliger_SEB-721 | 794,993,132 | 43,921 | 83.34K (2,666) | 55.15K (4,038) | 72084 | 2021-11-13 | SAMEA7962359 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| cowcod | Sebastes levis | GCA_916701195.1_S-levis_KUI567 | 779,712,678 | 35,933 | 66.05K (3,345) | 50.52K (4,446) | 72083 | 2021-11-13 | SAMEA7962357 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| deepwater redfish | Sebastes mentella | GCA_916701205.1_S-mentella_KUI3097 | 793,932,119 | 45,734 | 66.70K (3,444) | 45.71K (5,040) | 394696 | 2021-11-13 | SAMEA7962363 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| squarespot rockfish | Sebastes hopkinsi | GCA_916701215.1_S-hopkinsi_xSEB-7 | 845,328,362 | 83,794 | 134.21K (1,745) | 73.19K (3,126) | 72080 | 2021-10-09 | SAMEA7962348 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| blue rockfish | Sebastes mystinus (2) | GCA_916701235.1_S-mystinus_xSEB-27 | 786,622,309 | 61,615 | 38.68K (5,510) | 27.14K (7,969) | 72088 | 2021-10-09 | SAMEA7962372 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| blue rockfish | Sebastes mystinus (2) | GCA_916701245.1_S-mystinus_SEB-17 | 798,473,675 | 40,244 | 118.29K (1,902) | 77.44K (2,863) | 72088 | 2021-10-07 | SAMEA7962371 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| bony fishes | Sebastes hubbsi | GCA_916701285.1_S_hubbsi_137692 | 794,046,964 | 42,685 | 92.80K (2,440) | 61.03K (3,644) | 201703 | 2021-10-07 | SAMEA7962349 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| shortbelly rockfish | Sebastes jordani | GCA_916701295.1_S-jordani_KUI517 | 782,434,185 | 41,754 | 79.17K (2,782) | 51.10K (4,282) | 72081 | 2021-11-13 | SAMEA7962353 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| black rockfish | Sebastes melanops | GCA_916701325.1_S_melanops_134856 | 782,955,195 | 56,282 | 43.60K (5,014) | 29.16K (7,560) | 72085 | 2021-11-13 | SAMEA7962361 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| willow rockfish | Sebastes itinus | GCA_916701335.1_S_itinus_130931 | 786,593,811 | 44,214 | 62.15K (3,532) | 44.92K (4,884) | 1344804 | 2021-11-13 | SAMEA7962352 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| bony fishes | Sebastes nivosus | GCA_916701345.1_S_nivosus_134373 | 775,402,973 | 34,026 | 95.00K (2,210) | 60.49K (3,581) | 290526 | 2021-11-13 | SAMEA7962375 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| stripetail rockfish | Sebastes saxicola | GCA_916701375.1_S-saxicola_KUI2167 | 791,449,454 | 39,854 | 81.97K (2,663) | 57.72K (3,912) | 72101 | 2021-11-13 | SAMEA7962399 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| halfbanded rockfish | Sebastes semicinctus | GCA_916701385.1_S-semicinctus_xSEB-12 | 794,013,289 | 38,335 | 117.39K (1,909) | 67.67K (3,268) | 320568 | 2021-11-13 | SAMEA7962402 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| harlequin rockfish | Sebastes variegatus | GCA_916701405.1_S-variegatus_KUI3213 | 789,441,459 | 65,009 | 41.10K (5,382) | 23.91K (9,262) | 72106 | 2021-10-09 | SAMEA7962412 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| sharpchin rockfish | Sebastes zacentrus | GCA_916701415.1_S-zacentrus_KUI3201 | 801,744,738 | 58,077 | 48.41K (4,626) | 32.41K (6,948) | 72108 | 2021-10-09 | SAMEA7962415 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| grass rockfish | Sebastes rastrelliger | GCA_916701435.1_S-rastrelliger_xSEB-1 | 788,811,301 | 31,019 | 131.31K (1,716) | 87.09K (2,570) | 72095 | 2021-11-13 | SAMEA7962388 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| dusky rockfish | Sebastes variabilis | GCA_916701445.1_S-variabilis_KUI2038 | 818,206,237 | 54,219 | 79.69K (2,891) | 48.46K (4,589) | 394707 | 2021-11-13 | SAMEA7962411 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| treefish | Sebastes serriceps | GCA_916701455.1_S-serriceps_TREE_S68 | 783,510,486 | 38,660 | 75.73K (2,951) | 54.83K (4,069) | 201707 | 2021-11-13 | SAMEA7962403 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| bony fishes | Sebastes trivittatus | GCA_916701465.1_S_trivittatus_137156 | 786,425,508 | 50,165 | 56.96K (3,795) | 37.66K (5,829) | 214487 | 2021-11-13 | SAMEA7962407 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| bony fishes | Sebastes scythropus | GCA_916701475.1_S_scythropus_145769 | 774,900,323 | 34,942 | 100.86K (2,116) | 60.15K (3,597) | 173978 | 2021-10-06 | SAMEA7962401 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| redstripe rockfish | Sebastes proriger | GCA_916701495.1_S-proriger_KUI3229 | 777,084,423 | 48,265 | 55.52K (3,866) | 29.39K (7,473) | 394703 | 2021-10-07 | SAMEA7962387 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| northern rockfish | Sebastes polyspinis | GCA_916701505.1_S-polyspinis_KUI2030 | 799,549,506 | 58,469 | 67.41K (3,152) | 37.66K (5,596) | 394702 | 2021-10-09 | SAMEA7962386 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| yelloweye rockfish | Sebastes ruberrimus (2) | GCA_916701515.1_S-ruberrimus_582396486 | 778,407,898 | 61,647 | 34.43K (6,384) | 24.30K (9,169) | 72098 | 2021-10-09 | SAMEA7962395 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| yelloweye rockfish | Sebastes ruberrimus (2) | GCA_916701565.1_S-ruberrimus_Seb91 | 613,031,427 | 322,528 | 2.85K (65,581) | 1.93K (97,531) | 72098 | 2021-10-09 | SAMEA7962396 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| yellowmouth rockfish | Sebastes reedi | GCA_916701525.1_S-reedi_SEB-7 | 805,431,085 | 33,831 | 125.26K (1,822) | 84.14K (2,683) | 394704 | 2021-11-13 | SAMEA7962389 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| rosy rockfish | Sebastes rosaceus (2) | GCA_916701535.1_S-rosaceus_xSEB-30 | 808,943,198 | 45,388 | 85.11K (2,700) | 56.02K (4,126) | 72096 | 2021-11-13 | SAMEA7962393 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| rosy rockfish | Sebastes rosaceus (2) | GCA_916701555.1_S-rosaceus_SEB-73 | 959,585,719 | 881 | 31.72M (14) | 2.98M (95) | 72096 | 2021-11-13 | SAMEA7962392 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| greenblotched rockfish | Sebastes rosenblatti | GCA_916701545.1_S-rosenblatti_SEB-147 | 779,946,216 | 46,985 | 65.96K (3,288) | 33.80K (6,565) | 72097 | 2021-11-13 | SAMEA7962394 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| bony fishes | Sebastes taczanowskii | GCA_916701585.1_S_taczanowskii_133425 | 784,925,061 | 57,465 | 56.93K (3,810) | 34.86K (6,260) | 201709 | 2021-10-09 | SAMEA7962405 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| pygmy rockfish | Sebastes wilsoni | GCA_916701595.1_S-wilsoni_KUI3199 | 807,364,487 | 49,185 | 75.29K (3,050) | 47.04K (4,862) | 72107 | 2021-11-13 | SAMEA7962414 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| bony fishes | Sebastes vulpes | GCA_916701615.1_S_vulpes_130347 | 523,558,042 | 48,136 | 11.97K (14,022) | 10.15K (16,561) | 201710 | 2021-11-13 | SAMEA7962413 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| bony fishes | Sebastes thompsoni | GCA_916701625.1_S_thompsoni_137678 | 773,123,815 | 36,115 | 84.81K (2,536) | 51.20K (4,258) | 105747 | 2021-11-13 | SAMEA7962406 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| bony fishes | Sebastes zonatus | GCA_916701635.1_S_zonatus_130348 | 763,582,854 | 88,304 | 20.19K (10,605) | 15.55K (13,895) | 214489 | 2021-10-09 | SAMEA7962416 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| bony fishes | Sebastolobus alascanus (2) | GCA_916701645.1_B-alascanus_SEB-31 | 858,864,611 | 74,625 | 78.32K (2,911) | 35.93K (6,404) | EN | 72110 | 2021-10-09 | SAMEA7962420 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | |
| bony fishes | Sebastolobus alascanus (2) | GCA_916701685.1_B-alascanus_SEB-32 | 852,356,357 | 72,387 | 66.16K (3,430) | 31.48K (7,291) | EN | 72110 | 2021-10-09 | SAMEA7962421 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | |
| bony fishes | Sebastiscus albofasciatus | GCA_916701655.1_S_albofasciatus_133423 | 787,252,963 | 54,923 | 66.24K (3,412) | 41.07K (5,458) | 72109 | 2021-10-09 | SAMEA7962417 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| bony fishes | Sebastiscus tertius | GCA_916701665.1_S_tertius_139529 | 772,441,018 | 43,426 | 60.83K (3,601) | 42.04K (5,250) | 1472224 | 2021-11-13 | SAMEA7962419 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| bony fishes | Sebastolobus altivelis | GCA_916701675.1_B-altivelis_xSEB-32 | 851,925,253 | 73,453 | 56.46K (4,013) | 29.58K (7,726) | 8110 | 2021-10-09 | SAMEA7962422 | PRJEB42258 | UNIVERSITY OF CALIFORNIA AT BERKELEY | fish | ||
| view | Indo-Pacific tarpon | Megalops cyprinoides (3) | GCF_013368585.1_fMegCyp1.pri | 959,258,046 | 207 | 38.25M (10) | 26.85M (13) | 118141 | 2020-06-23 | SAMN12623619 | PRJNA561967 | Vertebrate Genomes Project | fish | |
| Indo-Pacific tarpon | Megalops cyprinoides (3) | GCA_013368575.1_fMegCyp1.alt | 920,469,332 | 4,333 | 465.75K (552) | 465.75K (552) | 118141 | 2020-06-23 | SAMN12623619 | PRJNA561968 | Vertebrate Genomes Project | fish | ||
| Indo-Pacific tarpon | Megalops cyprinoides (3) | GCA_013368585.1_fMegCyp1.pri | 959,258,777 | 207 | 38.25M (10) | 26.85M (13) | 118141 | 2020-06-23 | SAMN12623619 | PRJNA561967 | Vertebrate Genomes Project | fish | ||
| tropical clawed frog | Xenopus tropicalis (8) | GCA_000004195.4_UCB_Xtro_10.0 | 1,451,283,599 | 166 | 153.96M (5) | 14.63M (32) | 8364 | 2019-11-14 | SAMN13041969 | PRJNA577946 | University of California, Berkeley | vertebrate | ||
| tropical clawed frog | Xenopus tropicalis (8) | GCA_013368275.1_ASM1336827v1 | 1,485,568,097 | 1,955 | 150.16M (5) | 377.94K (972) | 8364 | 2020-06-23 | SAMN14253885 | PRJNA606649 | Southern University of Science and Technology | vertebrate | ||
| view | tropical clawed frog | Xenopus tropicalis (8) | GCF_000004195.4_UCB_Xtro_10.0/xenTro10 | 1,451,301,209 | 167 | 153.96M (5) | 14.63M (32) | 8364 | 2019-11-14 | SAMN13041969 | PRJNA577946 | University of California, Berkeley | vertebrate | |
| tropical clawed frog | Xenopus tropicalis (8) | GCA_000004195.2_Xtropicalis_v7 | 1,437,513,269 | 7,727 | 124.13M (5) | 8364 | 2012-12-19 | DOE Joint Genome Institute | vertebrate | |||||
| green anole | Anolis carolinensis (2) | GCA_000090745.2_AnoCar2.0 | 1,799,143,587 | 6,457 | 4.03M (119) | 79.87K (6,217) | 28377 | 2011-01-10 | SAMN02981230 | PRJNA18787 | Broad Institute | vertebrate | ||
| view | green anole | Anolis carolinensis (2) | GCF_000090745.1_AnoCar2.0/anoCar2 | 1,799,143,587 | 6,457 | 4.03M (119) | 79.87K (6,217) | 28377 | 2011-01-10 | SAMN02981230 | PRJNA18787 | Broad Institute | vertebrate | |
| view | sea lamprey | Petromyzon marinus (5) | GCA_000148955.1_Petromyzon_marinus-7.0/petMar2 | 885,534,757 | 25,005 | 184.62K (1,148) | 13.11K (14,491) | 7757 | 2010-10-07 | SAMN02981275 | PRJNA12880 | Washington University (WashU) | vertebrate | |
| view | sea lamprey | Petromyzon marinus (5) | GCA_002833325.1_Pmar_germline_1.0/petMar3 | 1,130,417,696 | 12,061 | 11.93M (34) | 170.71K (1,431) | 7757 | 2017-12-11 | SAMN06131802 | PRJNA357048 | University of Kentucky | vertebrate | |
| view | sea lamprey | Petromyzon marinus (5) | GCA_010993595.1_kPetMar1.alt | 841,632,067 | 4,064 | 397.80K (613) | 397.35K (613) | 7757 | 2020-02-24 | SAMN12629506 | PRJNA562012 | Vertebrate Genomes Project | vertebrate | |
| sea lamprey | Petromyzon marinus (5) | GCA_010993605.1_kPetMar1.pri | 1,089,034,212 | 1,433 | 13.00M (33) | 2.54M (102) | 7757 | 2020-02-24 | SAMN12629506 | PRJNA562011 | Vertebrate Genomes Project | vertebrate | ||
| view | sea lamprey | Petromyzon marinus (5) | GCF_010993605.1_kPetMar1.pri | 1,089,050,413 | 1,434 | 13.00M (33) | 2.54M (102) | 7757 | 2020-02-24 | SAMN12629506 | PRJNA562011 | Vertebrate Genomes Project | vertebrate | |
| elephant shark | Callorhinchus milii (4) | GCA_000165045.2_Callorhinchus_milii-6.1.3 | 974,481,817 | 21,203 | 4.52M (60) | 46.58K (5,393) | 7868 | 2013-12-11 | SAMN00000800 | PRJNA18361 | Institute of Molecular and Cell Biology, Singapore | vertebrate | ||
| elephant shark | Callorhinchus milii (4) | GCA_018977255.1_IMCB_Cmil_1.0 | 991,519,186 | 1,761 | 69.33M (5) | 1.63M (160) | 7868 | 2021-06-21 | SAMN12905446 | PRJNA575613 | Institute of Molecular and Cell Biology, A*star, Singapore | vertebrate | ||
| view | elephant shark | Callorhinchus milii (4) | GCF_018977255.1_IMCB_Cmil_1.0 | 991,535,955 | 1,762 | 69.33M (5) | 1.63M (160) | 7868 | 2021-06-21 | SAMN12905446 | PRJNA575613 | Institute of Molecular and Cell Biology, A*star, Singapore | vertebrate | |
| view | elephant shark | Callorhinchus milii (4) | GCF_000165045.1_Callorhinchus_milii-6.1.3/calMil1 | 974,498,586 | 21,204 | 4.52M (60) | 46.58K (5,393) | 7868 | 2013-12-11 | Institute of Molecular and Cell Biology, Singapore | vertebrate | |||
| Burmese python | Python bivittatus (2) | GCA_000186305.2_Python_molurus_bivittatus-5.0.2 | 1,435,034,535 | 39,112 | 213.97K (1,939) | 10.66K (38,693) | VU | 176946 | 2013-09-15 | SAMN02981298 | PRJNA61243 | The Consortium for Comparative Genomics, UC Denver | vertebrate | |
| view | Burmese python | Python bivittatus (2) | GCF_000186305.1_Python_molurus_bivittatus-5.0.2 | 1,435,052,152 | 39,113 | 213.97K (1,939) | 10.66K (38,693) | VU | 176946 | 2013-09-15 | SAMN02981298 | PRJNA61243 | The Consortium for Comparative Genomics, UC Denver | vertebrate |
| coelacanth | Latimeria chalumnae (3) | GCA_000225785.1_LatCha1 | 2,860,575,514 | 22,818 | 924.51K (830) | 12.67K (50,767) | CR | 7897 | 2011-09-12 | SAMN00138723 | PRJNA56111 | Broad Institute | vertebrate | |
| coelacanth | Latimeria chalumnae (3) | GCA_000325985.2_LatCha_J1.0 | 2,736,328,441 | 37,861 | 331.42K (2,460) | 11.39K (66,708) | CR | 7897 | 2012-09-21 | SAMD00041835 | PRJDB500 | Tokyo Institute of Technology | vertebrate | |
| view | coelacanth | Latimeria chalumnae (3) | GCF_000225785.1_LatCha1/latCha1 | 2,860,591,921 | 22,819 | 924.51K (830) | 12.67K (50,768) | CR | 7897 | 2011-09-12 | SAMN00138723 | PRJNA56111 | Broad Institute | vertebrate |
| Chinese soft-shelled turtle | Pelodiscus sinensis (2) | GCA_000230535.1_PelSin_1.0 | 2,202,466,388 | 19,903 | 3.35M (189) | 21.99K (28,685) | VU | 13735 | 2012-07-24 | SAMN02981371 | PRJNA68233 | P. sinensis genome project consortium | vertebrate | |
| view | Chinese soft-shelled turtle | Pelodiscus sinensis (2) | GCF_000230535.1_PelSin_1.0 | 2,202,483,752 | 19,904 | 3.35M (189) | 21.99K (28,686) | VU | 13735 | 2012-07-24 | SAMN02981371 | PRJNA68233 | P. sinensis genome project consortium | vertebrate |
| little skate | Leucoraja erinacea | GCA_000238235.1_LER_WGS_1 | 1,555,461,038 | 2,962,366 | 665 (586,123) | 7782 | 2011-12-15 | SAMN00189066 | PRJNA60893 | North East Cyberinfrastructure Consortium | vertebrate | |||
| western painted turtle | Chrysemys picta bellii (8) | GCA_000241765.5_Chrysemys_picta_BioNano-3.0.4 | 2,481,351,664 | 76,387 | 16.03M (45) | 21.32K (29,042) | 8478 | 2020-08-21 | SAMN02713681 | PRJNA78657 | Painted turtle genome sequencing consortium | vertebrate | ||
| western painted turtle | Chrysemys picta bellii (8) | GCA_011386835.1_ASM1138683v1 | 2,335,704,405 | 132,827 | 15.93M (35) | 86.77K (7,518) | 8478 | 2020-03-16 | SAMN13293682 | PRJNA589899 | Washington University School of Medicine | vertebrate | ||
| view | western painted turtle | Chrysemys picta bellii (8) | GCF_000241765.4_Chrysemys_picta_BioNano-3.0.4 | 2,481,368,539 | 76,388 | 16.03M (45) | 21.32K (29,043) | 8478 | 2020-08-21 | SAMN02713681 | PRJNA78657 | Painted turtle genome sequencing consortium | vertebrate | |
| western painted turtle | Chrysemys picta bellii (8) | GCA_000241765.2_Chrysemys_picta_bellii-3.0.3 | 2,365,749,696 | 78,594 | 7.07M (76) | 8478 | 2014-3-31 | Painted turtle genome sequencing consortium | vertebrate | |||||
| view | western painted turtle | Chrysemys picta bellii (8) | GCF_000241765.3_Chrysemys_picta_bellii-3.0.3 | 2,365,766,571 | 78,595 | 6.61M (102) | 21.35K (29,024) | 8478 | 2014-03-31 | Painted turtle genome sequencing consortium | vertebrate | |||
| spotted gar | Lepisosteus oculatus (2) | GCA_000242695.1_LepOcu1 | 945,861,706 | 1,925 | 6.93M (45) | 68.34K (3,307) | 7918 | 2012-01-13 | SAMN00706774 | PRJNA68247 | Broad Institute | vertebrate | ||
| view | spotted gar | Lepisosteus oculatus (2) | GCF_000242695.1_LepOcu1 | 945,878,036 | 1,926 | 6.93M (45) | 68.34K (3,307) | 7918 | 2012-01-13 | SAMN00706774 | PRJNA68247 | Broad Institute | vertebrate | |
| American alligator | Alligator mississippiensis (9) | GCA_000281125.4_ASM28112v4 | 2,161,713,562 | 7,093 | 18.60M (34) | 16.66K (37,731) | 8496 | 2016-03-28 | SAMN02981418 | PRJNA159843 | International Crocodilian Genomes Working Group | vertebrate | ||
| American alligator | Alligator mississippiensis (9) | GCA_001541155.1_Algmis_Hirise_1.0 | 2,161,708,281 | 7,091 | 18.60M (34) | 16.66K (37,731) | 8496 | 2016-01-26 | SAMN02981418 | PRJNA305630 | Dovetail Genomics | vertebrate | ||
| American alligator | Alligator mississippiensis (9) | GCA_001541185.1_Algmis_1.0 | 2,156,978,045 | 54,713 | 81.37K (7,420) | 16.66K (37,761) | 8496 | 2016-01-26 | SAMN02981418 | PRJNA301461 | Dovetail Genomics | vertebrate | ||
| view | American alligator | Alligator mississippiensis (9) | GCF_000281125.3_ASM28112v4 | 2,161,730,208 | 7,094 | 18.60M (34) | 16.66K (37,732) | 8496 | 2016-03-28 | SAMN02981418 | PRJNA159843 | International Crocodilian Genomes Working Group | vertebrate | |
| American alligator | Alligator mississippiensis (9) | GCA_000281125.1_allMis0.2 | 2,174,243,242 | 14,644 | 508.97K (1,206) | 8496 | 2012-7-24 | International Crocodilian Genomes Working Group | vertebrate | |||||
| Green sea turtle | Chelonia mydas (8) | GCA_000344595.1_CheMyd_1.0 | 2,208,393,880 | 140,022 | 3.86M (158) | 29.24K (21,095) | EN | 8469 | 2013-03-18 | SAMN02981410 | PRJNA104937 | BGI | vertebrate | |
| Green sea turtle | Chelonia mydas (8) | GCA_015220195.2_rCheMyd1.alt.v2 | 1,896,142,417 | 6,737 | 455.48K (1,132) | 454.33K (1,134) | EN | 8469 | 2021-07-15 | SAMN12612360 | PRJNA561942 | G10K | vertebrate | |
| Green sea turtle | Chelonia mydas (8) | GCA_015237465.2_rCheMyd1.pri.v2 | 2,134,358,617 | 92 | 134.43M (5) | 39.42M (17) | EN | 8469 | 2021-07-15 | SAMN12612360 | PRJNA561941 | Vertebrate Genomes Project | vertebrate | |
| view | Green sea turtle | Chelonia mydas (8) | GCF_015237465.2_rCheMyd1.pri.v2 | 2,134,375,114 | 93 | 134.43M (5) | 39.42M (17) | EN | 8469 | 2021-07-15 | SAMN12612360 | PRJNA561941 | Vertebrate Genomes Project | vertebrate |
| Green sea turtle | Chelonia mydas (8) | GCA_015220195.1_rCheMyd1.alt | 1,896,142,417 | 6,737 | 455.48K (1,132) | 454.33K (1,134) | EN | 8469 | 2020-11-02 | G10K | vertebrate | |||
| view | Green sea turtle | Chelonia mydas (8) | GCF_015237465.1_rCheMyd1.pri | 2,134,593,249 | 99 | 134.43M (5) | 39.42M (17) | EN | 8469 | 2020-11-05 | Vertebrate Genomes Project | vertebrate | ||
| spiny softshell turtle | Apalone spinifera | GCA_000385615.1_ASM38561v1 | 1,931,078,847 | 286,620 | 2.31M (225) | 4.69K (115,167) | 55534 | 2013-05-03 | SAMN03004388 | PRJNA177958 | WUGSC | vertebrate | ||
| Chinese alligator | Alligator sinensis (2) | GCA_000455745.1_ASM45574v1 | 2,270,550,999 | 9,316 | 2.19M (325) | 23.41K (28,841) | CR | 38654 | 2013-08-29 | SAMN02981559 | PRJNA215016 | BGI-shenzhen | vertebrate | |
| view | Chinese alligator | Alligator sinensis (2) | GCF_000455745.1_ASM45574v1 | 2,270,567,745 | 9,317 | 2.19M (325) | 23.41K (28,841) | CR | 38654 | 2013-08-29 | SAMN02981559 | PRJNA215016 | BGI-shenzhen | vertebrate |
| Arctic lamprey | Lethenteron camtschaticum (2) | GCA_000466285.1_LetJap1.0 | 1,030,662,718 | 86,125 | 1.05M (203) | 9.24K (23,681) | 980415 | 2013-09-13 | SAMN02981514 | PRJNA192554 | Institute of Molecular and Cell Biology | vertebrate | ||
| Arctic lamprey | Lethenteron camtschaticum (2) | GCA_018977245.1_IMCB_Ljap_1.0 | 1,074,727,531 | 3,553 | 10.78M (37) | 1.60M (164) | 980415 | 2021-06-21 | SAMN02981514 | PRJNA575627 | Institute of Molecular and Cell Biology, A*star, Singapore | vertebrate | ||
| Japanese eel | Anguilla japonica (5) | GCA_000470695.1_japanese_eel_genome_v1_25_oct_2011_japonica_c401b400k25m200_sspacepremiumk3a02n24_extra.final.scaffolds | 1,151,137,423 | 323,740 | 52.85K (4,463) | 3.21K (77,924) | EN | 7937 | 2014-03-18 | SAMN03004389 | PRJNA158309 | ZF-screens B.V. | vertebrate | |
| Japanese eel | Anguilla japonica (5) | GCA_002723815.1_Ajaponica_ver_D2 | 1,151,067,796 | 195,366 | 472.08K (534) | 7.66K (30,923) | EN | 7937 | 2017-10-25 | SAMD00080929 | PRJDB5760 | Tohoku National Fisheries Research Institute | vertebrate | |
| Japanese eel | Anguilla japonica (5) | GCA_003597225.1_Ajp_01 | 966,917,315 | 83,292 | 36.26M (10) | 11.01K (19,732) | EN | 7937 | 2018-09-14 | SAMD00098195 | PRJDB6433 | National Research Institute of Fisheries Science | vertebrate | |
| Japanese eel | Anguilla japonica (5) | GCA_006352315.1_ASM635231v1 | 1,181,134,743 | 50,457 | 937.11K (246) | 11.79K (20,827) | EN | 7937 | 2019-06-18 | SAMN11472315 | PRJNA533944 | BGI-SZ ocean institute | vertebrate | |
| Japanese eel | Anguilla japonica (5) | GCA_916313395.1_AJA001 | 1,037,276,149 | 10,158 | 1.43M (188) | 31.04K (6,885) | EN | 7937 | 2021-09-29 | SAMEA104717565 | PRJEB25708 | INSTITUTE OF INFORMATION SCIENCE, Academia Sinica | vertebrate | |
| king cobra | Ophiophagus hannah | GCA_000516915.1_OphHan1.0 | 1,594,074,654 | 296,399 | 241.52K (1,750) | 5.20K (71,208) | VU | 8665 | 2013-12-11 | SAMN02439592 | PRJNA201683 | Naturalis Biodiversity Center | vertebrate | |
| European eel | Anguilla anguilla (5) | GCA_000695075.1_Anguilla_anguilla_v1_09_nov_10 | 1,018,701,900 | 501,148 | 59.66K (2,979) | 2.54K (84,692) | CR | 7936 | 2014-05-20 | SAMN02777865 | PRJNA73577 | ZF-screens B.V. | vertebrate | |
| European eel | Anguilla anguilla (5) | GCA_013347855.1_fAngAng1.pri | 979,029,243 | 53 | 57.21M (7) | 5.11M (54) | CR | 7936 | 2020-06-18 | SAMN12623627 | PRJNA561979 | Vertebrate Genomes Project | vertebrate | |
| European eel | Anguilla anguilla (5) | GCA_013347865.1_fAngAng1.alt | 965,248,483 | 2,338 | 723.28K (378) | CR | 7936 | 2020-06-12 | SAMN12623627 | PRJNA561984 | Vertebrate Genomes Project | vertebrate | ||
| European eel | Anguilla anguilla (5) | GCA_018320845.1_ANANG_Geno_1.0 | 1,033,223,415 | 1,466 | 55.98M (8) | 13.16M (26) | CR | 7936 | 2021-05-12 | SAMN17394361 | PRJNA693699 | GenoFish | vertebrate | |
| view | European eel | Anguilla anguilla (5) | GCF_013347855.1_fAngAng1.pri | 979,045,926 | 54 | 57.21M (7) | 5.11M (54) | CR | 7936 | 2020-06-18 | SAMN12623627 | PRJNA561979 | Vertebrate Genomes Project | vertebrate |
| snakes | Crotalus pyrrhus | GCA_000737285.1_CrotMitch1.0 | 1,126,791,715 | 473,380 | 5.30K (58,761) | 4.10K (76,106) | 384069 | 2014-08-01 | SAMN02918464 | PRJNA255393 | Reed College | vertebrate | ||
| Australian saltwater crocodile | Crocodylus porosus (4) | GCA_000768395.2_Cpor_3.0 | 2,125,619,597 | 2,430 | 7.56M (87) | 32.92K (18,837) | 8502 | 2020-02-05 | SAMN03102602 | PRJNA163131 | The International Crocodilian Genomes Working Group | vertebrate | ||
| Australian saltwater crocodile | Crocodylus porosus (4) | GCA_001723895.1_CroPor_comp1 | 2,049,519,336 | 69 | 84.44M (7) | 34.07K (17,094) | 8502 | 2016-09-13 | SAMN03102602 | PRJNA163131 | Mississippi State University | vertebrate | ||
| view | Australian saltwater crocodile | Crocodylus porosus (4) | GCF_001723895.1_CroPor_comp1 | 2,049,536,252 | 70 | 84.44M (7) | 34.07K (17,095) | 8502 | 2016-09-13 | SAMN03102602 | PRJNA163131 | Mississippi State University | vertebrate | |
| Australian saltwater crocodile | Crocodylus porosus (4) | GCA_000768395.1_Cpor_2.0 | 2,120,573,303 | 23,365 | 204.53K (2,891) | 32.73K (18,928) | 8502 | 2014-10-24 | The International Crocodilian Genomes Working Group | vertebrate | ||||
| Gharial | Gavialis gangeticus (3) | GCA_000775435.1_ggan_v0.2 | 2,188,353,730 | 47,351 | 100.82K (6,437) | 14.20K (44,972) | CR | 94835 | 2014-11-14 | SAMN03102901 | PRJNA172383 | The International Crocodilian Genomes Working Group | vertebrate | |
| Gharial | Gavialis gangeticus (3) | GCA_001723915.1_GavGan_comp1 | 2,640,775,248 | 80 | 96.08M (8) | 14.80K (39,516) | CR | 94835 | 2016-09-13 | SAMN03102901 | PRJNA172383 | The International Crocodilian Genomes Working Group | vertebrate | |
| view | Gharial | Gavialis gangeticus (3) | GCF_001723915.1_GavGan_comp1 | 2,640,792,433 | 81 | 96.08M (8) | 14.80K (39,517) | CR | 94835 | 2016-09-13 | SAMN03102901 | PRJNA172383 | The International Crocodilian Genomes Working Group | vertebrate |
| common viper | Vipera berus berus | GCA_000800605.1_Vber.be_1.0 | 1,532,390,814 | 28,883 | 126.45K (3,408) | 11.72K (31,412) | 31156 | 2014-12-10 | SAMN02780930 | PRJNA170536 | BCM-HGSC | vertebrate | ||
| frogs & toads | Nanorana parkeri (2) | GCA_000935625.1_ASM93562v1 | 2,053,849,526 | 25,187 | 1.07M (546) | 32.80K (17,994) | 125878 | 2015-03-17 | SAMN02720813 | PRJNA243398 | BGI-Shenzhen | vertebrate | ||
| view | frogs & toads | Nanorana parkeri (2) | GCF_000935625.1_ASM93562v1/nanPar1 | 2,053,867,363 | 25,188 | 1.07M (546) | 32.80K (17,994) | 125878 | 2015-03-17 | SAMN02720813 | PRJNA243398 | BGI-Shenzhen | vertebrate | |
| snakes | Thamnophis sirtalis (3) | GCA_001077635.2_Thamnophis_sirtalis-6.0 | 1,424,897,867 | 7,930 | 647.59K (639) | 10.45K (28,680) | 35019 | 2015-06-26 | SAMN03759628 | PRJNA189551 | The Genome Institute at Washington University School of Medicine (WUGSC) | vertebrate | ||
| view | snakes | Thamnophis sirtalis (3) | GCF_001077635.1_Thamnophis_sirtalis-6.0/thaSir1 | 1,424,897,867 | 7,930 | 647.59K (639) | 10.45K (28,680) | 35019 | 2015-06-26 | SAMN03759628 | PRJNA189551 | The Genome Institute at Washington University School of Medicine (WUGSC) | vertebrate | |
| snakes | Pantherophis guttatus (3) | GCA_001185365.2_UNIGE_PanGut_3.0 | 1,706,961,544 | 34,268 | 16.79M (24) | 37.98K (11,281) | 94885 | 2020-04-13 | SAMN12106767 | PRJNA268069 | University of Geneva | vertebrate | ||
| view | snakes | Pantherophis guttatus (3) | GCF_001185365.1_UNIGE_PanGut_3.0 | 1,706,961,544 | 34,268 | 16.79M (24) | 37.98K (11,281) | 94885 | 2020-04-13 | SAMN12106767 | PRJNA268069 | University of Geneva | vertebrate | |
| snakes | Pantherophis guttatus (3) | GCA_001185365.1_PanGut1.0 | 1,404,220,341 | 883,920 | 4.32K (78,027) | 2.39K (138,293) | 94885 | 2015-07-21 | University of Geneva | vertebrate | ||||
| lizards | Gekko japonicus (2) | GCA_001447785.1_Gekko_japonicus_V1.1 | 2,490,257,917 | 191,499 | 707.73K (963) | 29.57K (23,117) | 146911 | 2015-11-25 | SAMN04157958 | PRJNA298277 | Nantong University | vertebrate | ||
| view | lizards | Gekko japonicus (2) | GCF_001447785.1_Gekko_japonicus_V1.1 | 2,490,274,461 | 191,500 | 707.73K (963) | 29.57K (23,118) | 146911 | 2015-11-25 | SAMN04157958 | PRJNA298277 | Nantong University | vertebrate | |
| snakes | Protobothrops mucrosquamatus (5) | GCA_001527695.3_P.Mucros_1.0 | 1,673,859,098 | 52,279 | 424.05K (924) | 21.95K (19,484) | 103944 | 2016-01-22 | SAMD00043515 | PRJDB4386 | Okinawa Institute of Science and Technology | vertebrate | ||
| view | snakes | Protobothrops mucrosquamatus (5) | GCF_001527695.2_P.Mucros_1.0 | 1,673,876,332 | 52,280 | 424.05K (924) | 21.95K (19,484) | 103944 | 2016-01-22 | SAMD00043515 | PRJDB4386 | Okinawa Institute of Science and Technology | vertebrate | |
| snakes | Protobothrops mucrosquamatus (5) | GCA_001527695.1_P.Mucros_1.0 | 1,542,263,865 | 167,851 | 21.95K (19,484) | 103944 | 2016-1-15 | Okinawa Institute of Science and Technology | vertebrate | |||||
| snakes | Protobothrops mucrosquamatus (5) | GCA_001527695.2_P.Mucros_1.0 | 1,673,860,670 | 52,280 | 424.05K (924) | 103944 | 2016-1-22 | Okinawa Institute of Science and Technology | vertebrate | |||||
| snakes | Protobothrops mucrosquamatus (5) | GCF_001527695.1_P.Mucros_1.0 | 1,673,877,904 | 52,281 | 424.05K (924) | 103944 | 2016-1-22 | Okinawa Institute of Science and Technology | vertebrate | |||||
| American eel | Anguilla rostrata (3) | GCA_001606085.1_ASM160608v1 | 1,413,032,609 | 79,209 | 86.64K (4,171) | 7.36K (47,981) | EN | 7938 | 2016-04-04 | SAMN03737505 | PRJNA285069 | Universite Laval | vertebrate | |
| American eel | Anguilla rostrata (3) | GCA_018555375.2_ASM1855537v1.1 | 975,288,912 | 1,093 | 56.61M (8) | 5.02M (50) | EN | 7938 | 2021-05-28 | SAMN18538529 | PRJNA718538 | Laval University | vertebrate | |
| American eel | Anguilla rostrata (3) | GCA_018555375.1_ASM1855537v1 | 975,437,971 | 1,112 | 56.61M (8) | 5.02M (50) | EN | 7938 | 2021-05-28 | Laval University | vertebrate | |||
| timber rattlesnake | Crotalus horridus | GCA_001625485.1_ASM162548v1 | 1,520,334,138 | 186,068 | 23.83K (16,747) | 5.83K (62,949) | 35024 | 2016-04-21 | SAMN01815951 | PRJNA181087 | Douglas Rhoads | vertebrate | ||
| whale shark | Rhincodon typus (7) | GCA_001642345.3_ASM164234v3 | 2,961,781,270 | 39,171 | 344.65K (2,425) | 156.47K (5,068) | EN | 259920 | 2021-09-07 | SAMN04562461 | PRJNA255419 | Emory University | vertebrate | |
| whale shark | Rhincodon typus (7) | GCA_013626285.1_RhiTyp_1.0 | 2,820,592,179 | 136,451 | 3.13M (238) | 113.61K (7,214) | EN | 259920 | 2020-07-24 | SAMN09428498 | PRJNA476219 | Ulsan National Institute of Science and Technology | vertebrate | |
| view | whale shark (14 2022 Squalomix) | Rhincodon typus (7) | GCF_021869965.1_sRhiTyp1.1 | 2,881,325,413 | 16,776 | 70.80M (14) | EN | n/a | n/a | n/a | vertebrate | |||
| African clawed frog | Xenopus laevis (4) | GCA_001663975.1_Xenopus_laevis_v2 | 2,718,416,252 | 108,032 | 136.57M (9) | 19.71K (36,504) | 8355 | 2016-08-09 | SAMN04518361 | PRJNA313213 | International Xenopus Sequencing Consortium | vertebrate | ||
| African clawed frog | Xenopus laevis (4) | GCA_017654675.1_Xenopus_laevis_v10.1 | 2,742,451,793 | 54 | 155.25M (8) | 22.45M (35) | 8355 | 2021-04-12 | SAMN18035302 | PRJNA313213 | International Xenopus Sequencing Consortium | vertebrate | ||
| view | African clawed frog | Xenopus laevis (4) | GCF_017654675.1_Xenopus_laevis_v10.1 | 2,742,469,346 | 55 | 155.25M (8) | 22.45M (35) | 8355 | 2021-04-12 | SAMN18035302 | PRJNA313213 | International Xenopus Sequencing Consortium | vertebrate | |
| view | African clawed frog | Xenopus laevis (4) | GCF_001663975.1_Xenopus_laevis_v2/xenLae2 | 2,718,433,805 | 108,033 | 136.57M (9) | 19.71K (36,504) | 8355 | 2016-08-09 | International Xenopus Sequencing Consortium | vertebrate | |||
| diamondback terrapin | Malaclemys terrapin terrapin (2) | GCA_001728815.2_terp_v2_2 | 2,439,754,582 | 21,684 | 437.27K (1,451) | VU | 391341 | 2016-09-20 | SAMN05591378 | PRJNA339452 | University of Maryland | vertebrate | ||
| diamondback terrapin | Malaclemys terrapin terrapin (2) | GCA_001728815.1_terp_v2_2 | 2,439,737,865 | 21,683 | 437.27K (1,451) | VU | 391341 | 2016-09-15 | University of Maryland | vertebrate | ||||
| American bullfrog | Lithobates catesbeianus (2) | GCA_002284835.2_RCv2.1 | 6,250,353,185 | 1,544,635 | 39.36K (31,248) | 5.42K (256,232) | 8400 | 2017-09-01 | SAMN03760860 | PRJNA285814 | BC Cancer Agency | vertebrate | ||
| American bullfrog | Lithobates catesbeianus (2) | GCA_002284835.1_RCv2 | 5,233,229,631 | 2,082,530 | 5.15K (252,464) | 8400 | 2017-01-18 | BC Cancer Agency | vertebrate | |||||
| Agassiz's desert tortoise | Gopherus agassizii | GCA_002896415.1_ASM289641v1 | 2,184,966,080 | 172,559 | 228.11K (2,740) | 43.73K (14,432) | CR | 38772 | 2018-01-24 | SAMN05991319 | PRJNA352726 | Arizona State University | vertebrate | |
| axolotl | Ambystoma mexicanum (3) | GCA_002915635.3_AmbMex60DD | 28,206,905,576 | 27,157 | 1.206G (11) | 218.00K (35,415) | CR | 8296 | 2021-04-01 | SAMN06554622 | PRJNA378970 | Max Planck Society/University of Kentucky | vertebrate | |
| axolotl | Ambystoma mexicanum (3) | GCA_002915635.1_ASM291563v1 | 32,393,605,577 | 125,724 | 3.05M (2,918) | CR | 8296 | 2018-2-5 | Max Planck Society | vertebrate | ||||
| axolotl | Ambystoma mexicanum (3) | GCA_002915635.2_ASM291563v2 | 32,396,370,977 | 98,070 | 1.413G (11) | 216.37K (35,790) | CR | 8296 | 2018-12-04 | Max Planck Society/University of Kentucky | vertebrate | |||
| Three-toed box turtle | Terrapene carolina triunguis (4) | GCA_002925995.2_T_m_triunguis-2.0 | 2,571,267,249 | 52,260 | 24.25M (25) | 76.61K (9,271) | VU | 2587831 | 2018-09-21 | SAMN08285364 | PRJNA415469 | McDonnell Genome Institute - Washington University School of Medicine | vertebrate | |
| view | Three-toed box turtle | Terrapene carolina triunguis (4) | GCF_002925995.2_T_m_triunguis-2.0 | 2,571,267,249 | 52,260 | 24.25M (25) | 76.61K (9,271) | VU | 2587831 | 2018-09-21 | SAMN08285364 | PRJNA415469 | McDonnell Genome Institute - Washington University School of Medicine | vertebrate |
| Three-toed box turtle | Terrapene carolina triunguis (4) | GCA_002925995.1_T_m_triunguis-1.0 | 2,323,105,764 | 107,230 | 1.39M (458) | VU | 1415176 | 2018-2-12 | McDonnell Genome Institute - Washington University School of Medicine | vertebrate | ||||
| Three-toed box turtle | Terrapene carolina triunguis (4) | GCF_002925995.1_T_m_triunguis-1.0 | 2,323,105,764 | 107,230 | 1.39M (458) | VU | 1415176 | 2018-2-12 | McDonnell Genome Institute - Washington University School of Medicine | vertebrate | ||||
| tuatara | Sphenodon punctatus | GCA_003113815.1_ASM311381v1 | 4,272,214,985 | 16,536 | 3.05M (370) | 27.07K (40,904) | 8508 | 2018-05-10 | SAMN08038466 | PRJNA418887 | University of Otago | vertebrate | ||
| lizards | Paroedura picta (2) | GCA_003118565.2_Ppicta_v2.0 | 1,562,175,643 | 4,871 | 109.00M (6) | 21.85K (16,181) | 143630 | 2021-09-14 | SAMD00069447 | PRJDB5392 | Phyloinformatics Unit, Center for Life Science Technologies (CLST), RIKEN | vertebrate | ||
| lizards | Paroedura picta (2) | GCA_003118565.1_Ppicta_assembly_v1 | 1,694,157,353 | 110,906 | 4.11M (93) | 15.22K (24,442) | 143630 | 2018-03-22 | Phyloinformatics Unit, Center for Life Science Technologies (CLST), RIKEN | vertebrate | ||||
| prairie rattlesnake | Crotalus viridis viridis (2) | GCA_003400415.2_UTA_CroVir_3.0 | 1,340,198,908 | 7,043 | 179.90M (3) | 14.89K (22,243) | 8742 | 2019-01-08 | SAMN07738522 | PRJNA413201 | University of Texas at Arlington | vertebrate | ||
| prairie rattlesnake | Crotalus viridis viridis (2) | GCA_003400415.1_CroVir2.0 | 1,335,528,708 | 47,782 | 139.17K (2,516) | 8742 | 2018-8-16 | University of Texas at Arlington | vertebrate | |||||
| habu | Protobothrops flavoviridis | GCA_003402635.1_HabAm_1.0 | 1,413,200,976 | 84,502 | 467.05K (805) | 18.88K (20,310) | 88087 | 2018-08-02 | SAMD00115727 | PRJDB5507 | Division of Genomics, Medical Institute of Bioregulation, Kyushu University | vertebrate | ||
| brownbanded bambooshark | Chiloscyllium punctatum | GCA_003427335.1_Cpunctatum_v1.0 | 3,375,698,300 | 280,241 | 1.96M (417) | 21.28K (38,047) | 137246 | 2018-08-02 | SAMD00098917 | PRJDB6260 | Phyloinformatics Unit, Division of Bio-Function Dynamics Imaging, Center for Life Science Technologies, RIKEN | vertebrate | ||
| cloudy catshark | Scyliorhinus torazame | GCA_003427355.1_Storazame_v1.0 | 4,470,980,620 | 458,049 | 282.42K (4,174) | 7.15K (143,644) | 75743 | 2018-08-02 | SAMD00098918 | PRJDB6260 | Phyloinformatics Unit, Division of Bio-Function Dynamics Imaging, Center for Life Science Technologies, RIKEN | vertebrate | ||
| snakes | Thermophis baileyi | GCA_003457575.1_DSBC_Tbai_1.0 | 1,747,678,728 | 20,729 | 2.41M (202) | 18.23K (25,621) | 527827 | 2018-09-05 | SAMN09279788 | PRJNA473624 | Chengdu Institute of Biology, Chinese Academy of Sciences | vertebrate | ||
| Argentine black and white tegu | Salvator merianae (2) | GCA_003586115.2_HLtupMer6 | 2,068,170,046 | 4,512 | 55.38M (12) | 500.02K (1,096) | 96440 | 2018-12-11 | SAMN09273531 | PRJNA473319 | Center for Systems Biology Dresden | vertebrate | ||
| Argentine black and white tegu | Salvator merianae (2) | GCA_003586115.1_HLtupMer3 | 2,026,218,827 | 5,988 | 28.15M (22) | 96440 | 2018-9-20 | Center for Systems Biology Dresden | vertebrate | |||||
| Abingdon island giant tortoise | Chelonoidis abingdonii (2) | GCA_003597395.1_ASM359739v1 | 2,300,745,855 | 10,623 | 1.28M (529) | 73.19K (8,706) | 106734 | 2018-09-25 | SAMN07840320 | PRJNA416050 | Universidad de Oviedo | vertebrate | ||
| view | Abingdon island giant tortoise | Chelonoidis abingdonii (2) | GCF_003597395.1_ASM359739v1 | 2,300,739,315 | 10,618 | 1.28M (529) | 73.19K (8,706) | 106734 | 2018-09-25 | SAMN07840320 | PRJNA416050 | Universidad de Oviedo | vertebrate | |
| great white shark | Carcharodon carcharias (5) | GCA_003604245.1_ASM360424v1 | 3,915,280,839 | 9,222 | 2.99M (330) | 46.10K (23,307) | VU | 13397 | 2018-10-01 | SAMN01915239 | PRJNA269969 | Cornell University | vertebrate | |
| great white shark | Carcharodon carcharias (5) | GCA_017639455.1_sCarCar2.alt | 6,205,005 | 39 | 838.96K (2) | 838.96K (2) | VU | 13397 | 2021-03-30 | SAMN12629504 | PRJNA562008 | Vertebrate Genomes Project | vertebrate | |
| great white shark | Carcharodon carcharias (5) | GCA_017639515.1_sCarCar2.pri | 4,286,311,192 | 719 | 169.92M (11) | 6.54M (145) | VU | 13397 | 2021-03-30 | SAMN12629504 | PRJNA562007 | Vertebrate Genomes Project | vertebrate | |
| view | great white shark | Carcharodon carcharias (5) | GCF_017639515.1_sCarCar2.pri | 4,286,311,191 | 719 | 169.92M (11) | 6.54M (145) | VU | 13397 | 2021-03-30 | SAMN12629504 | PRJNA562007 | Vertebrate Genomes Project | vertebrate |
| McCord's box turtle | Cuora mccordi | GCA_003846335.1_ASM384633v1 | 2,390,374,423 | 100,020 | 32.63M (22) | 74.34K (8,739) | CR | 241437 | 2018-11-28 | SAMN10392581 | PRJNA491715 | McDonnell Genome Institute - Washington University School of Medicine | vertebrate | |
| big-headed turtle | Platysternon megacephalum | GCA_003942145.1_ASM394214v1 | 2,319,087,892 | 359,693 | 7.22M (84) | 213.60K (2,983) | CR | 55544 | 2018-12-12 | SAMN09536731 | PRJNA479402 | Institute of Zoology, Guangdong Academy of Sciences | vertebrate | |
| whitespotted bambooshark | Chiloscyllium plagiosum (2) | GCA_004010195.1_ASM401019v1 | 3,776,550,609 | 601,049 | 72.14M (18) | 37.24K (25,901) | 36176 | 2019-01-10 | SAMN09508879 | PRJNA478295 | BGI | vertebrate | ||
| view | whitespotted bambooshark | Chiloscyllium plagiosum (2) | GCF_004010195.1_ASM401019v2 | 3,556,477,427 | 101,977 | 73.17M (17) | 40.60K (23,073) | 36176 | 2019-01-10 | SAMN09508879 | PRJNA478295 | BGI | vertebrate | |
| Asian annulated sea snake | Hydrophis cyanocinctus (2) | GCA_004023725.1_ASM402372v1 | 1,389,857,256 | 546,690 | 7.44K (49,998) | 3.63K (96,200) | 8686 | 2019-01-15 | SAMN10441167 | PRJNA506024 | Second Military Medical University | vertebrate | ||
| Asian annulated sea snake | Hydrophis cyanocinctus (2) | GCA_019473425.1_HCya_v2 | 1,980,712,740 | 1,163 | 264.25M (3) | 18.99M (27) | 8686 | 2021-08-09 | SAMN12828154 | PRJNA573877 | Shanghai University | vertebrate | ||
| Hardwick's sea snake | Hydrophis hardwickii | GCA_004023765.1_ASM402376v1 | 1,296,394,113 | 616,046 | 5.39K (65,337) | 2.85K (115,433) | 8781 | 2019-01-15 | SAMN10441168 | PRJNA506024 | Second Military Medical University | vertebrate | ||
| Amboina box turtle | Cuora amboinensis (2) | GCA_004028625.2_ASM402862v2 | 2,214,832,461 | 89,628 | 247.61K (1,982) | 47.15K (13,440) | EN | 74909 | 2019-03-22 | SAMN10722981 | PRJNA511034 | McDonnell Genome Institute - Washington University School of Medicine | vertebrate | |
| Amboina box turtle | Cuora amboinensis (2) | GCA_004028625.1_Cuora_amboinensis-1.0 | 2,125,035,481 | 23,192 | 30.75M (21) | 47.44K (12,777) | EN | 74909 | 2019-01-18 | McDonnell Genome Institute - Washington University School of Medicine | vertebrate | |||
| snakes | Emydocephalus ijimae | GCA_004319985.1_emyIji_1.0 | 1,625,199,642 | 157,858 | 18.94K (24,369) | 18.55K (24,836) | 34996 | 2019-01-09 | SAMD00132326 | PRJDB7221 | Kyoto University | vertebrate | ||
| snakes | Hydrophis melanocephalus | GCA_004320005.1_hydMel_1.0 | 1,402,639,853 | 122,022 | 59.81K (6,002) | 7.41K (46,596) | 34990 | 2019-02-13 | SAMD00134211 | PRJDB7271 | Kyoto University | vertebrate | ||
| blue-ringed sea krait | Laticauda laticaudata | GCA_004320025.1_latLat_1.0 | 1,558,706,106 | 83,587 | 39.33K (11,071) | 35.58K (12,653) | 8630 | 2019-01-09 | SAMD00132327 | PRJDB7226 | Kyoto University | vertebrate | ||
| yellow-lipped sea krait | Laticauda colubrina (2) | GCA_004320045.1_latCor_1.0 | 2,024,687,924 | 62,906 | 3.14M (180) | 26.72K (18,755) | 8628 | 2019-01-09 | SAMD00134349 | PRJDB7284 | Kyoto University | vertebrate | ||
| yellow-lipped sea krait | Laticauda colubrina (2) | GCA_015471245.1_latCor_2.0 | 2,038,820,311 | 20,583 | 39.96M (16) | 38.28K (13,881) | 8628 | 2020-11-04 | SAMD00134349 | PRJDB7284 | Kyoto University | vertebrate | ||
| Common wall lizard | Podarcis muralis (2) | GCA_004329235.1_PodMur_1.0 | 1,511,002,858 | 2,160 | 92.40M (7) | 714.61K (622) | 64176 | 2019-03-07 | SAMN10820182 | PRJNA515813 | CIBIO-InBIO | vertebrate | ||
| view | Common wall lizard | Podarcis muralis (2) | GCF_004329235.1_PodMur_1.0 | 1,511,020,169 | 2,161 | 92.40M (7) | 92.40M (7) | 64176 | 2019-03-07 | SAMN10820182 | PRJNA515813 | CIBIO-InBIO | vertebrate | |
| frogs & toads | Pyxicephalus adspersus | GCA_004786255.1_Pads_1.0 | 1,563,367,516 | 5,411 | 157.52M (5) | 30.45K (12,579) | 30357 | 2019-04-17 | SAMN08767028 | PRJNA439445 | University of Connecticut | vertebrate | ||
| Komodo dragon | Varanus komodoensis (3) | GCA_004798865.1_ASM479886v1 | 1,507,945,839 | 1,411 | 23.83M (17) | 189.46K (2,367) | EN | 61221 | 2019-04-17 | SAMN10967258 | PRJNA523222 | Gladstone Institutes | vertebrate | |
| Komodo dragon | Varanus komodoensis (3) | GCA_007859595.1_VCOM_VKom_1.0 | 1,606,418,949 | 84,067 | 23.22M (17) | 37.13K (12,348) | EN | 61221 | 2019-08-07 | SAMN10030706 | PRJNA490211 | Edward Via College of Osteopathic Medicine | vertebrate | |
| view | Komodo dragon | Varanus komodoensis (3) | GCF_004798865.1_ASM479886v1 | 1,507,945,839 | 1,411 | 23.83M (17) | 189.46K (2,367) | EN | 61221 | 2019-04-17 | SAMN10967258 | PRJNA523222 | Gladstone Institutes | vertebrate |
| leatherback sea turtle | Dermochelys coriacea (9) | GCA_006547105.1_GSC_toitle_1.0 | 2,154,166,173 | 56,317 | 120.03K (5,294) | 45.26K (14,298) | VU | 27794 | 2019-07-01 | SAMN11567340 | PRJNA528992 | Canada's Genomic Enterprise | vertebrate | |
| leatherback sea turtle | Dermochelys coriacea (9) | GCA_009762595.2_rDerCor1.alt.v2 | 1,444,786,651 | 8,999 | 246.49K (1,726) | 246.49K (1,726) | VU | 27794 | 2020-12-08 | SAMN12629498 | PRJNA561994 | Vertebrate Genomes Project | vertebrate | |
| leatherback sea turtle | Dermochelys coriacea (9) | GCA_009764565.4_rDerCor1.pri.v4 | 2,164,778,715 | 41 | 137.57M (5) | 7.03M (89) | VU | 27794 | 2021-08-25 | SAMN12629498 | PRJNA561993 | G10K | vertebrate | |
| view | leatherback sea turtle | Dermochelys coriacea (9) | GCF_009764565.3_rDerCor1.pri.v4 | 2,164,762,090 | 40 | 137.57M (5) | 7.03M (89) | VU | 27794 | 2021-08-25 | SAMN12629498 | PRJNA561993 | G10K | vertebrate |
| view | leatherback sea turtle | Dermochelys coriacea (9) | GCA_009762595.1_rDerCor1.alt | 1,443,623,898 | 8,982 | 246.45K (1,725) | VU | 27794 | 2019-12-18 | Vertebrate Genomes Project | vertebrate | |||
| view | leatherback sea turtle | Dermochelys coriacea (9) | GCA_009764565.1_rDerCor1.pri | 2,165,403,198 | 55 | 137.79M (5) | 7.96M (75) | VU | 27794 | 2019-12-19 | G10K | vertebrate | ||
| view | leatherback sea turtle | Dermochelys coriacea (9) | GCF_009764565.2_rDerCor1.pri.v3 | 2,164,762,090 | 40 | 137.57M (5) | 7.03M (89) | VU | 27794 | 2020-12-09 | G10K | vertebrate | ||
| view | Goodes thornscrub tortoise | Gopherus evgoodei (3) | GCA_007399395.1_rGopEvg1_v1.alt | 1,961,129,424 | 8,736 | 655.45K (865) | VU | 1825980 | 2019-07-24 | SAMN03496275 | PRJNA489104 | Vertebrate Genomes Project | vertebrate | |
| Goodes thornscrub tortoise | Gopherus evgoodei (3) | GCA_007399415.1_rGopEvg1_v1.p | 2,298,564,209 | 383 | 147.43M (5) | 13.03M (51) | VU | 1825980 | 2019-07-25 | SAMN03496275 | PRJNA489103 | Vertebrate Genomes Project | vertebrate | |
| view | Goodes thornscrub tortoise | Gopherus evgoodei (3) | GCF_007399415.2_rGopEvg1_v1.p | 2,298,564,209 | 383 | 147.43M (5) | 13.03M (51) | VU | 1825980 | 2019-07-25 | SAMN03496275 | PRJNA489103 | Vertebrate Genomes Project | vertebrate |
| tuberculate toadhead turtle | Mesoclemmys tuberculata | GCA_007922155.1_Mesoclemmys_tuberculata-1.0 | 2,027,505,490 | 53,667 | 46.42M (13) | 146.43K (3,804) | 904206 | 2019-08-05 | SAMN10734026 | PRJNA512125 | McDonnell Genome Institute - Washington University School of Medicine | vertebrate | ||
| Common snapping turtle | Chelydra serpentina (2) | GCA_007922165.1_Chelydra_serpentina-1.0 | 2,401,360,239 | 113,431 | 21.14M (33) | 80.59K (8,096) | 8475 | 2019-08-05 | SAMN10724079 | PRJNA512119 | McDonnell Genome Institute - Washington University School of Medicine | vertebrate | ||
| Common snapping turtle | Chelydra serpentina (2) | GCA_018859375.1_ASM1885937v1 | 2,257,717,881 | 13,222 | 5.59M (102) | 843.37K (504) | 8475 | 2021-06-11 | SAMN13981802 | PRJNA574487 | University of North Dakota | vertebrate | ||
| West African mud turtle | Pelusios castaneus | GCA_007922175.1_Pelusios_castaneus-1.0 | 2,044,278,682 | 69,036 | 14.06M (42) | 74.86K (7,920) | 367368 | 2019-08-01 | SAMN10724078 | PRJNA512121 | McDonnell Genome Institute - Washington University School of Medicine | vertebrate | ||
| pitted-shelled turtle | Carettochelys insculpta | GCA_007922185.1_Carettochelys_insculpta-1.0 | 2,356,570,494 | 48,450 | 45.88M (16) | 116.20K (5,690) | EN | 44489 | 2019-08-05 | SAMN10723924 | PRJNA512133 | McDonnell Genome Institute - Washington University School of Medicine | vertebrate | |
| turtles | Podocnemis expansa | GCA_007922195.1_Podocnemis_expansa-1.0 | 2,447,092,617 | 43,498 | 37.10M (21) | 134.82K (5,195) | 44507 | 2019-08-05 | SAMN10723688 | PRJNA512135 | McDonnell Genome Institute - Washington University School of Medicine | vertebrate | ||
| turtles | Emydura subglobosa | GCA_007922225.1_Emydura_subglobosa-1.0 | 1,986,702,056 | 43,399 | 44.76M (13) | 350.99K (1,650) | 251359 | 2019-08-05 | SAMN10723686 | PRJNA512130 | McDonnell Genome Institute - Washington University School of Medicine | vertebrate | ||
| turtles | Dermatemys mawii | GCA_007922305.1_Dermatemys_mawii-1.0 | 1,866,975,060 | 40,852 | 34.37M (17) | 183.96K (2,959) | CR | 55550 | 2019-08-05 | SAMN10723923 | PRJNA512129 | McDonnell Genome Institute - Washington University School of Medicine | vertebrate |