Schema for Non-coding RNAs - FlyBase Non-coding RNAs |
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Database: DmojImproved Primary Table: flybase_rRNA Row Count: 75
| field | example | SQL type | info |
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| bin | 585 | smallint(5) unsigned | range |
| chrom | scaffold_2441 | varchar(255) | values |
| chromStart | 497 | int(10) unsigned | range |
| chromEnd | 616 | int(10) unsigned | range |
| name | FBtr0292878 | varchar(255) | values |
| score | 1000 | int(10) unsigned | range |
| strand | - | char(1) | values |
| thickStart | 497 | int(10) unsigned | range |
| thickEnd | 616 | int(10) unsigned | range |
| reserved | 0 | int(10) unsigned | range |
| blockCount | 1 | int(10) unsigned | range |
| blockSizes | 119, | longblob | |
| chromStarts | 0, | longblob | |
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Sample Rows
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| bin | chrom | chromStart | chromEnd | name | score | strand | thickStart | thickEnd | reserved | blockCount | blockSizes | chromStarts |
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| 585 | scaffold_2441 | 497 | 616 | FBtr0292878 | 1000 | - | 497 | 616 | 0 | 1 | 119, | 0, |
| 585 | scaffold_2441 | 973 | 1092 | FBtr0292879 | 1000 | - | 973 | 1092 | 0 | 1 | 119, | 0, |
| 585 | scaffold_2693 | 256 | 375 | FBtr0292880 | 1000 | - | 256 | 375 | 0 | 1 | 119, | 0, |
| 585 | scaffold_3669 | 807 | 926 | FBtr0292881 | 1000 | + | 807 | 926 | 0 | 1 | 119, | 0, |
| 585 | scaffold_3670 | 59 | 178 | FBtr0292882 | 1000 | + | 59 | 178 | 0 | 1 | 119, | 0, |
| 585 | scaffold_3670 | 539 | 658 | FBtr0292883 | 1000 | + | 539 | 658 | 0 | 1 | 119, | 0, |
| 585 | scaffold_3670 | 1016 | 1135 | FBtr0292884 | 1000 | + | 1016 | 1135 | 0 | 1 | 119, | 0, |
| 585 | scaffold_4169 | 3735 | 3914 | FBtr0292885 | 1000 | + | 3735 | 3914 | 0 | 1 | 179, | 0, |
| 585 | scaffold_4734 | 3604 | 3735 | FBtr0292886 | 1000 | - | 3604 | 3735 | 0 | 1 | 131, | 0, |
| 585 | scaffold_4750 | 815 | 994 | FBtr0292887 | 1000 | - | 815 | 994 | 0 | 1 | 179, | 0, |
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Note: all start coordinates in our database are 0-based, not
1-based. See explanation
here.
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Non-coding RNAs (flybase_ncRNA) Track Description
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Description
This track shows the non-coding RNA annotations for D. mojavensis that were
generated by the Drosophila 12 Genomes Consortium. The annotations are available
for download at FlyBase.
References
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