Schema for Non-coding RNAs - FlyBase Non-coding RNAs |
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Database: DmojImproved Primary Table: flybase_snoRNA Row Count: 140
| field | example | SQL type | info |
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| bin | 599 | smallint(5) unsigned | range |
| chrom | improved_6498 | varchar(255) | values |
| chromStart | 1904281 | int(10) unsigned | range |
| chromEnd | 1904367 | int(10) unsigned | range |
| name | FBtr0293444 | varchar(255) | values |
| score | 1000 | int(10) unsigned | range |
| strand | - | char(1) | values |
| thickStart | 1904281 | int(10) unsigned | range |
| thickEnd | 1904367 | int(10) unsigned | range |
| reserved | 0 | int(10) unsigned | range |
| blockCount | 1 | int(10) unsigned | range |
| blockSizes | 86, | longblob | |
| chromStarts | 0, | longblob | |
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Sample Rows
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| bin | chrom | chromStart | chromEnd | name | score | strand | thickStart | thickEnd | reserved | blockCount | blockSizes | chromStarts |
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| 599 | improved_6498 | 1904281 | 1904367 | FBtr0293444 | 1000 | - | 1904281 | 1904367 | 0 | 1 | 86, | 0, |
| 599 | improved_6498 | 1905275 | 1905361 | FBtr0293444 | 1000 | - | 1905275 | 1905361 | 0 | 1 | 86, | 0, |
| 600 | improved_6680 | 1992106 | 1992169 | FBtr0293371 | 1000 | + | 1992106 | 1992169 | 0 | 1 | 63, | 0, |
| 600 | improved_6680 | 1992339 | 1992403 | FBtr0293372 | 1000 | + | 1992339 | 1992403 | 0 | 1 | 64, | 0, |
| 600 | improved_6680 | 1992562 | 1992627 | FBtr0293373 | 1000 | + | 1992562 | 1992627 | 0 | 1 | 65, | 0, |
| 600 | improved_6680 | 1992840 | 1992917 | FBtr0293374 | 1000 | + | 1992840 | 1992917 | 0 | 1 | 77, | 0, |
| 603 | improved_6680 | 2417278 | 2417428 | FBtr0293375 | 1000 | - | 2417278 | 2417428 | 0 | 1 | 150, | 0, |
| 615 | improved_6680 | 3990639 | 3990716 | FBtr0293376 | 1000 | + | 3990639 | 3990716 | 0 | 1 | 77, | 0, |
| 619 | improved_6680 | 4567482 | 4567561 | FBtr0293377 | 1000 | + | 4567482 | 4567561 | 0 | 1 | 79, | 0, |
| 619 | improved_6680 | 4567889 | 4567970 | FBtr0293378 | 1000 | + | 4567889 | 4567970 | 0 | 1 | 81, | 0, |
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Note: all start coordinates in our database are 0-based, not
1-based. See explanation
here.
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Non-coding RNAs (flybase_ncRNA) Track Description
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Description
This track shows the non-coding RNA annotations for D. mojavensis that were
generated by the Drosophila 12 Genomes Consortium. The annotations are available
for download at FlyBase.
References
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