field | example | description |
chrom | AWUT01017066 | Reference sequence chromosome or scaffold |
chromStart | 2195 | Start position in chromosome |
chromEnd | 2267 | End position in chromosome |
name | tRNA-Arg-GCG-AWUT01017066-1 | Short Name of item |
score | 1000 | Score from 0-1000 |
strand | + | + or - |
thickStart | 2195 | Start of where display should be thick (start codon) |
thickEnd | 2267 | End of where display should be thick (stop codon) |
reserved | 0,0,0 | Used as itemRgb as of 2004-11-22 |
blockCount | 1 | Number of blocks |
blockSizes | 72 | Comma separated list of block sizes |
chromStarts | 0 | Start positions relative to chromStart |
tRNAType | Arg | tRNA type |
antiCodon | GCG | Anticodon |
trnaScore | 20.4 | Infernal Score |
hmmScore | 45.90 | Primary structure-only (HMM) score |
str2Score | -25.50 | Secondary structure-only score |
isotypeCM | Ile | Isotype covariance model |
isotypeScore | 13.4 | Isotype score |
notes | pseudo,IPD:-12.70 | EukHighConfidenceFilter notes |