Schema for Het. Domains (R5) - Broad H3K9me3+ Heterochromatin Domains (R5)

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Schema for Het. Domains (R5) - Broad H3K9me3+ Heterochromatin Domains (R5)

Database: dm6 Primary Table: het_domains Row Count: 143

field	example	SQL type	info
`bin`	663	`smallint(5) unsigned`	range
`chrom`	chr2L	`varchar(255)`	values
`chromStart`	10226264	`int(10) unsigned`	range
`chromEnd`	10242014	`int(10) unsigned`	range
`name`	hetdomain_0	`varchar(255)`	values

Sample Rows

bin	chrom	chromStart	chromEnd	name
663	chr2L	10226264	10242014	hetdomain_0
673	chr2L	11535335	11552657	hetdomain_1
738	chr2L	20094744	20126283	hetdomain_2
92	chr2L	20165488	20197952	hetdomain_3
739	chr2L	20203136	20216601	hetdomain_4
749	chr2L	21546628	21567143	hetdomain_5
753	chr2L	22110863	22124389	hetdomain_6
94	chr2L	22164560	22304100	hetdomain_7
94	chr2L	22307243	22892545	hetdomain_8
11	chr2L	22910117	23101010	hetdomain_9

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.

Het. Domains (R5) (het_domains) Track Description


	Description This track depicts the genomic locations of heterochromatic domains based on the enrichment of H3K9me3 identified by the get.broad.enrichment.cluster method in SPP. The analysis results were lifted from the D. melanogaster Release 5 assembly over to the Release 6 assembly. Credits The locations of the heterochromatic domains were obtained from the Comparative modENCODE / ENCODE web site. References Ho JKW, et al. Comparative analysis of metazoan chromatin organization. Nature 512, 449-452 (28 August 2014).