Schema for FlyBase 6.06 CDS - FlyBase 6.06 Coding Exons

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Database: dm6 Primary Table: fb606cds Row Count: 62,811

field	example	SQL type	info
`bin`	585	`smallint(5) unsigned`	range
`chrom`	chr2L	`varchar(255)`	values
`chromStart`	7679	`int(10) unsigned`	range
`chromEnd`	8116	`int(10) unsigned`	range
`name`	CG11023:1_3883_0	`varchar(255)`	values
`score`	0	`int(10) unsigned`	range
`strand`	+	`char(1)`	values

Sample Rows

bin	chrom	chromStart	chromEnd	name	strand
585	chr2L	7679	8116	CG11023:1_3883_0	+
585	chr2L	8192	8610	CG11023:2_3883_1	+
585	chr2L	8192	8589	CG11023:3_3883_1	+
585	chr2L	8228	8610	CG11023:4_3883_1	+
585	chr2L	8667	9276	CG11023:5_3883_0	+
585	chr2L	11214	11344	l(2)gl:11_354_1	-
585	chr2L	11309	11344	l(2)gl:10_354_2	-
585	chr2L	11409	11518	l(2)gl:9_354_2	-
585	chr2L	11778	12221	l(2)gl:8_354_1	-
585	chr2L	12285	12928	l(2)gl:7_354_2	-

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.

FlyBase 6.06 CDS (fb606cds) Track Description


	Description This track shows the coding exons of protein-coding genes that have been annotated by FlyBase. These gene annotations correspond to D. melanogaster release 6.06. Credits Thanks to FlyBase for providing these annotations. References St Pierre SE, Ponting L, Stefancsik R, McQuilton P; FlyBase Consortium. FlyBase 102 — advanced approaches to interrogating FlyBase. Nucleic Acids Res. 2014 Jan;42(Database issue):D780-8

Description