Schema for FlyBase 6.06 Non-coding - FlyBase 6.06 Non-protein Coding Genes

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Schema for FlyBase 6.06 Non-coding - FlyBase 6.06 Non-protein Coding Genes

Database: dm6 Primary Table: flybase606_ncRNA Row Count: 2,910

field	example	SQL type	info
`chrom`	chr2L	`varchar(255)`	values
`chromStart`	21951	`int(10) unsigned`	range
`chromEnd`	24237	`int(10) unsigned`	range
`name`	CR43609-RA	`varchar(255)`	values
`score`	1000	`int(10) unsigned`	range
`strand`	+	`char(1)`	values
`thickStart`	21951	`int(10) unsigned`	range
`thickEnd`	24237	`int(10) unsigned`	range
`reserved`	0	`int(10) unsigned`	range
`blockCount`	2	`int(11)`	range
`blockSizes`	990,1240	`longblob`
`chromStarts`	0,1046	`longblob`
`id`	FBtr0309810	`varchar(255)`	values
`description`	CR43609-RA	`longblob`

Sample Rows

chrom	chromStart	chromEnd	name	score	strand	thickStart	thickEnd	reserved	blockCount	blockSizes	chromStarts	id	description
chr2L	21951	24237	CR43609-RA	1000	+	21951	24237	0	2	990,1240	0,1046	FBtr0309810	CR43609-RA
chr2L	54816	55767	CR46254-RA	1000	+	54816	55767	0	1	951	0	FBtr0347585	CR46254-RA
chr2L	65998	66242	CR45339-RA	1000	+	65998	66242	0	1	244	0	FBtr0345732	CR45339-RA
chr2L	66317	66524	CR45340-RA	1000	+	66317	66524	0	1	207	0	FBtr0345733	CR45340-RA
chr2L	71038	73836	CR44987-RA	1000	-	71038	73836	0	1	2798	0	FBtr0344052	CR44987-RA
chr2L	71038	73836	CR44987-RB	1000	-	71038	73836	0	2	2604,82	0,2716	FBtr0344053	CR44987-RB
chr2L	122836	124031	CR44969-RA	1000	+	122836	124031	0	3	236,119,707	0,303,488	FBtr0344032	CR44969-RA
chr2L	135401	136128	CR44185-RA	1000	+	135401	136128	0	1	727	0	FBtr0336836	CR44185-RA
chr2L	136143	136701	CR44186-RA	1000	+	136143	136701	0	2	73,429	0,129	FBtr0336837	CR44186-RA
chr2L	219650	220050	CR44220-RA	1000	+	219650	220050	0	1	400	0	FBtr0336984	CR44220-RA

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.

FlyBase 6.06 Non-coding (fb606ncgenes) Track Description


	Description This track shows the non-protein coding genes that have been annotated by FlyBase. These annotations correspond to D. melanogaster release 6.06. Credits Thanks to FlyBase for providing these annotations. References St Pierre SE, Ponting L, Stefancsik R, McQuilton P; FlyBase Consortium. FlyBase 102 — advanced approaches to interrogating FlyBase. Nucleic Acids Res. 2014 Jan;42(Database issue):D780-8