Schema for FlyBase CDS - FlyBase Coding Exons
  Database: dm6    Primary Table: fbcds    Row Count: 63,180   Data last updated: 2025-01-03
fieldexampleSQL type info
bin 585smallint(5) unsigned range
chrom chr2Lvarchar(255) values
chromStart 11214int(10) unsigned range
chromEnd 11344int(10) unsigned range
name l(2)gl:11_346_1varchar(255) values
score 0int(10) unsigned range
strand -char(1) values

Sample Rows
 
binchromchromStartchromEndnamescorestrand
585chr2L1121411344l(2)gl:11_346_10-
585chr2L1130911344l(2)gl:10_346_20-
585chr2L1140911518l(2)gl:9_346_20-
585chr2L1177812221l(2)gl:8_346_10-
585chr2L1228512928l(2)gl:7_346_20-
585chr2L1351913625l(2)gl:6_346_00-
585chr2L1368214874l(2)gl:5_346_10-
585chr2L1493215711l(2)gl:4_346_00-
585chr2L1493215648l(2)gl:3_346_00-
585chr2L1705217136l(2)gl:2_346_00-

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.

FlyBase CDS (fbcds) Track Description
 

Description

This track shows the coding exons of protein-coding genes that have been annotated by FlyBase. These coding exon annotations correspond to D. melanogaster release 6.61.

Credits

Thanks to FlyBase for providing these annotations.

References

Öztürk-Çolak A, Marygold SJ, Antonazzo G, Attrill H, Goutte-Gattat D, Jenkins VK, Matthews BB, Millburn G, Dos Santos G, Tabone CJ; FlyBase Consortium. FlyBase: updates to the Drosophila genes and genomes database. Genetics. 2024 May 7;227(1):iyad211. doi: 10.1093/genetics/iyad211. PMID: 38301657; PMCID: PMC11075543.