Schema for FlyBase Exons - FlyBase Transcribed Exons

JavaScript is disabled in your web browser

You must have JavaScript enabled in your web browser to use the Genome Browser

Schema for FlyBase Exons - FlyBase Transcribed Exons

Database: dm6 Primary Table: fbexon Row Count: 79,743 Data last updated: 2024-08-24

field	example	SQL type	info
`bin`	585	`smallint(5) unsigned`	range
`chrom`	chr2L	`varchar(255)`	values
`chromStart`	9838	`int(10) unsigned`	range
`chromEnd`	11344	`int(10) unsigned`	range
`name`	l(2)gl:18	`varchar(255)`	values
`score`	0	`int(10) unsigned`	range
`strand`	-	`char(1)`	values

Sample Rows

bin	chrom	chromStart	chromEnd	name	score	strand
585	chr2L	9838	11344	l(2)gl:18	0	-
585	chr2L	11409	11518	l(2)gl:17	0	-
585	chr2L	11778	12221	l(2)gl:16	0	-
585	chr2L	12285	12928	l(2)gl:15	0	-
585	chr2L	13519	13625	l(2)gl:14	0	-
585	chr2L	13682	14874	l(2)gl:13	0	-
585	chr2L	14932	15711	l(2)gl:12	0	-
585	chr2L	17052	17212	l(2)gl:11	0	-
585	chr2L	18025	18168	l(2)gl:10	0	-
585	chr2L	18260	18570	l(2)gl:9	0	-

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.

FlyBase Exons (fbexon) Track Description


	Description This track shows the transcribed exons of protein-coding genes that have been annotated by FlyBase. These exon annotations correspond to D. melanogaster release 6.58. Credits Thanks to FlyBase for providing these annotations. References Öztürk-Çolak A, Marygold SJ, Antonazzo G, Attrill H, Goutte-Gattat D, Jenkins VK, Matthews BB, Millburn G, Dos Santos G, Tabone CJ; FlyBase Consortium. FlyBase: updates to the Drosophila genes and genomes database. Genetics. 2024 May 7;227(1):iyad211. doi: 10.1093/genetics/iyad211. PMID: 38301657; PMCID: PMC11075543.