Schema for TES (Celniker) (R5) - Transcription End Sites (Celniker Group) (R5)

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Schema for TES (Celniker) (R5) - Transcription End Sites (Celniker Group) (R5)

Database: dm6 Primary Table: celniker_tes Row Count: 25,226

field	example	SQL type	info
`bin`	585	`smallint(5) unsigned`	range
`chrom`	chr2L	`varchar(255)`	values
`chromStart`	9483	`int(10) unsigned`	range
`chromEnd`	9484	`int(10) unsigned`	range
`name`	TES_CG11023_9484	`varchar(255)`	values
`score`	0	`int(10) unsigned`	range
`strand`	+	`char(1)`	values

Sample Rows

bin	chrom	chromStart	chromEnd	name	score	strand
585	chr2L	9483	9484	TES_CG11023_9484	0	+
585	chr2L	9838	9839	TES_l(2)gl_9839	0	-
585	chr2L	21822	21823	TES_Ir21a_21823	0	-
585	chr2L	24236	24237	TES_CR43609_24237	0	+
585	chr2L	25401	25402	TES_Cda5_25402	0	-
585	chr2L	71080	71081	TES_dbr_71081	0	+
585	chr2L	71233	71234	TES_dbr_71234	0	+
585	chr2L	71389	71390	TES_dbr_71390	0	+
585	chr2L	76097	76098	TES_galectin_76098	0	+
585	chr2L	76210	76211	TES_galectin_76211	0	+

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.

TES (Celniker) (R5) (celniker_tes) Track Description


	Description This track shows the transcription end sites (TES) in D. melanogaster that have been identified by the modENCODE Drosophila Transcriptome group. These TES annotations are supported by RNA-Seq data or the poly(A) tail of full-length cDNAs. Credits This dataset is available from the ENCODE FTP site. Hoskins RA. et al. Genome-wide analysis of promoter architecture in Drosophila melanogaster. Genome Res. 2011 Feb;21(2):182-92.