Schema for Enhancers (R5) - Enhancers Identified by CBP ChIP-chip and ChIP-Seq (R5)

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Schema for Enhancers (R5) - Enhancers Identified by CBP ChIP-chip and ChIP-Seq (R5)

Database: dm6 Primary Table: enhancers Row Count: 103

field	example	SQL type	info
`chrom`	chr2L	`varchar(255)`	values
`chromStart`	518499	`int(10) unsigned`	range
`chromEnd`	520000	`int(10) unsigned`	range
`name`	mE1_CBP_Enhancer_00001	`varchar(255)`	values
`score`	0	`int(10) unsigned`	range
`strand`	+	`char(1)`	values
`id`	FBsf0000343764	`varchar(255)`	values
`description`	bound_moiety=nej	`longblob`

Sample Rows

chrom	chromStart	chromEnd	name	score	strand	id	description
chr2L	518499	520000	mE1_CBP_Enhancer_00001	0	+	FBsf0000343764	bound_moiety=nej
chr2L	2164249	2165750	mE1_CBP_Enhancer_00002	0	+	FBsf0000343765	bound_moiety=nej
chr2L	2180999	2182500	mE1_CBP_Enhancer_00003	0	+	FBsf0000343766	bound_moiety=nej
chr2L	2181199	2182400	mE1_CBP_Enhancer_00004	0	+	FBsf0000343767	bound_moiety=nej
chr2L	2182399	2183600	mE1_CBP_Enhancer_00005	0	+	FBsf0000343768	bound_moiety=nej
chr2L	2193099	2194300	mE1_CBP_Enhancer_00006	0	+	FBsf0000343769	bound_moiety=nej
chr2L	2442453	2451242	dpp-enhancer-1	0	+	FBsf0000161142	associated_genes=dpp
chr2L	2445769	2446581	dpp-enhancer-2	0	+	FBsf0000161151	associated_genes=dpp
chr2L	2463167	2471973	dpp-enhancer-3	0	+	FBsf0000161152	associated_genes=dpp
chr2L	2475948	2494046	dpp-enhancer-4	0	+	FBsf0000161153	associated_genes=dpp

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.

Enhancers (R5) (enhancers) Track Description


	Description This track shows the locations of the enhancer elements based on the analysis of the ChIP-chip and ChIP-seq results for the CREB-binding protein (CBP) in mixed embryos. Credits Thanks to FlyBase for providing these annotations. References Nègre N, et al. A cis-regulatory map of the Drosophila genome. Nature. 2011 Mar 24;471(7339):527-31.