Schema for Insulators (R5) - Class I and Class II Insulator Elements (R5)

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Schema for Insulators (R5) - Class I and Class II Insulator Elements (R5)

Database: dm6 Primary Table: insulators Row Count: 7,683

field	example	SQL type	info
`chrom`	chr2L	`varchar(255)`	values
`chromStart`	16760	`int(10) unsigned`	range
`chromEnd`	16771	`int(10) unsigned`	range
`name`	Insulator_II_529	`varchar(255)`	values
`score`	0	`int(10) unsigned`	range
`strand`	+	`char(1)`	values
`id`	FBsf0000152581	`varchar(255)`	values
`description`	bound_moiety=su(Hw)	`longblob`

Sample Rows

chrom	chromStart	chromEnd	name	score	strand	id	description
chr2L	16760	16771	Insulator_II_529	0	+	FBsf0000152581	bound_moiety=su(Hw)
chr2L	18837	18848	Insulator_I_1	0	+	FBsf0000154964	bound_moiety=CTCF,Cp190,BEAF-32
chr2L	19628	19639	Insulator_II_530	0	+	FBsf0000152582	bound_moiety=su(Hw)
chr2L	21779	21790	Insulator_I_2	0	+	FBsf0000154965	bound_moiety=Cp190,BEAF-32,CTCF
chr2L	35611	35622	Insulator_I_3	0	+	FBsf0000154966	bound_moiety=BEAF-32,CTCF,Cp190
chr2L	42092	42103	Insulator_I_4	0	+	FBsf0000154967	bound_moiety=BEAF-32,Cp190,CTCF
chr2L	65387	65398	Insulator_I_5	0	+	FBsf0000154968	bound_moiety=BEAF-32,CTCF,Cp190
chr2L	73458	73469	Insulator_I_6	0	+	FBsf0000154969	bound_moiety=CTCF,BEAF-32,Cp190
chr2L	94542	94553	Insulator_I_7	0	+	FBsf0000154970	bound_moiety=CTCF,BEAF-32,Cp190
chr2L	102266	102277	Insulator_I_8	0	+	FBsf0000154971	bound_moiety=BEAF-32,Cp190,CTCF

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.

Insulators (R5) (insulators) Track Description


	Description This track shows the locations of the insulator elements that have been annotated by the modENCODE project. Class I insulator elements are defined as regions that are enriched in at least two of the following components: CP190, BEAF32, and CTCF. Class II insulator elements are defined as regions that are enriched in su(Hw). Credits Thanks to FlyBase for providing these annotations. References Nègre N, et al. A cis-regulatory map of the Drosophila genome. Nature. 2011 Mar 24;471(7339):527-31.