Schema for Tallymer - Repetitive Regions Identified by Tallymer
  Database: dm6    Primary Table: tallymer Data last updated: 2016-01-23
Big Bed File: /gbdb/dm6/bbi/dm6_tallymer.bb
Item Count: 128,294
Format description: Browser Extensible Data
fieldexampledescription
chromchr2LReference sequence chromosome or scaffold
chromStart15683760Start position in chromosome
chromEnd15684024End position in chromosome

Sample Rows
 
chromchromStartchromEnd
chr2L1568376015684024
chr2L1568402515685812
chr2L1568581315688166
chr2L1569142615691498
chr2L1569282615692898
chr2L1569581015695850
chr2L1570168615701727
chr2L1570272315702770
chr2L1570669015706730
chr2L1570875515708801

Tallymer (tallymer) Track Description
 

Description

This evidence track shows the tallymer analysis of the D. melanogaster genome.

References

The Tallymer software is available as part of the GenomeTools package.

Kurtz S., Narechania A., Stein J.C., Ware D. A new method to compute K-mer frequencies and its application to annotate large repetitive plant genomes. BMC Genomics 2008, 9:517.