Schema for ucscToRefSeq
  Database: dm6    Primary Table: ucscToRefSeq    Row Count: 1,870   Data last updated: 2022-10-21
fieldexampleSQL type info
chrom chrXvarchar(255) values
chromStart 0int(10) unsigned range
chromEnd 23542271int(10) unsigned range
name NC_004354.4varchar(255) values

Connected Tables and Joining Fields
        dm6.chromInfo.chrom (via ucscToRefSeq.chrom)

Sample Rows
 
chromchromStartchromEndname
chrX023542271NC_004354.4
chr2L023513712NT_033779.5
chr2R025286936NT_033778.4
chr3L028110227NT_037436.4
chr3R032079331NT_033777.3
chr401348131NC_004353.4
chrY03667352NC_024512.1
chrX_CP007103v1_random033320NW_007931105.1
chrX_CP007104v1_random027447NW_007931106.1
chrX_DS483648v1_random013940NW_001844937.1

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.

RefSeq Acc (ucscToRefSeq) Track Description
 

Description

This track associates UCSC Genome Browser chromosome names to accession identifiers from the NCBI Reference Sequence Database (RefSeq).

The data were downloaded from the NCBI assembly database.

Credits

The data for this track was prepared by Hiram Clawson.