Description
Small (1-10bp) tandem repeats within each scaffold of the D. mojavensis genome
were identified using PHOBOS
with the following parameters:
- Match: 1
- Mismatch: -5
- Indel: -5
- Min Score: 12
- Recursion: 5
References
Mayer, Christoph, Phobos 3.3.11, 2006-2010,
http://www.rub.de/spezzoo/cm/cm_phobos.htm.
Mayer C, Leese F, Tollrian R.
Genome-wide
analysis of tandem repeats in Daphnia pulex--a comparative approach.
BMC Genomics. 2010 Apr 30;11:277.
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