Description

This track shows the tblastn alignment of the coding exons of D. melanogaster genes against the D. simulans genome. The coding exon sequences were obtained from FlyBase. The tblastn search was performed using the following parameters: -e=1e-2 -topComboN=1 -links -hspsepSmax=10000 -hspsepQmax=1000 -matrix=PAM40 -Q=7 -R=2

References

St Pierre SE, Ponting L, Stefancsik R, McQuilton P; FlyBase Consortium. FlyBase 102 — advanced approaches to interrogating FlyBase. Nucleic Acids Res. 2014 Jan;42(Database issue):D780-8

Gish, W. WU BLAST 2.0. (1996-2006)