Subtracks⇓  Description⇓  MUSIC PolII ChIP-Seq Peaks Track Settings
 
modENCODE RNA Polymerase ChIP-Seq Peaks Identified by MUSIC   (All ChIP Seq Tracks)

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 Embryos, 4-8 hr MUSIC Peaks  modENCODE RNA PolII MUSIC Peaks for 4-8 hr Embryos   Schema 
 
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 Embryos, 8-12 hr MUSIC Peaks  modENCODE RNA PolII MUSIC Peaks for 8-12 hr Embryos   Schema 
 
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 Embryos, 12-16 hr MUSIC Peaks  modENCODE RNA PolII MUSIC Peaks for 12-16 hr Embryos   Schema 
 
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 Embryos, 16-20 hr MUSIC Peaks  modENCODE RNA PolII MUSIC Peaks for 16-20 hr Embryos   Schema 
 
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 Embryos, 20-24 hr MUSIC Peaks  modENCODE RNA PolII MUSIC Peaks for 20-24 hr Embryos   Schema 
 
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 L1 MUSIC Peaks  modENCODE RNA PolII MUSIC Peaks for L1 Stage Larvae   Schema 
 
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 L2 MUSIC Peaks  modENCODE RNA PolII MUSIC Peaks for L2 Stage Larvae   Schema 
 
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 L3 MUSIC Peaks  modENCODE RNA PolII MUSIC Peaks for L3 Stage Larvae   Schema 
 
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 Pupae MUSIC Peaks  modENCODE RNA PolII MUSIC Peaks for Pupae   Schema 
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Description

These tracks show the regions in the genome that are significantly enriched in RNA Polymerase II ChIP-Seq reads at different developmental stages as determined by MUSIC.

The ChIP-Seq data were produced as part of the modENCODE project and were obtained from the NCBI Sequence Reads Archive under the accession number SRP001424.

Credits

Ho JW et al. ChIP-chip versus ChIP-seq: lessons for experimental design and data analysis. BMC Genomics. 2011 Feb 28;12:134.

Harmanci A, Rozowsky J, Gerstein M. MUSIC: identification of enriched regions in ChIP-Seq experiments using a mappability-corrected multiscale signal processing framework. Genome Biol. 2014;15(10):474.

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