UCSC Genome Browser on D. melanogaster Aug. 2014 (BDGP Release 6 + ISO1 MT/dm6)
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chr4:307,000-312,000 5,001 bp.
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-   Mapping and Sequencing Tracks
Base Position
Chromosome Band
Gap
GC Percent
Assembly
INSDC
RefSeq Acc
Restr Enzymes
Short Match
Melting Temp.
RNASlider MFE
-   Transgenic Insertions
1M-8M Screens (R5)
9M Screen (R5)
GAA Screen
Chr4 Constructs
Landing Pad Lines (R5)
MiMIC Lines
-   Chromatin Domains
Het. Domains (R5)
BG3 9-state (R5)
S2 9-state (R5)
BG3 30-state (R5)
S2 30-state (R5)
Kc 5-state (R5)
hiHMM Models (R5)
S2 Zhou 30-state (R5)
LAD (R5)
Hi-C Domains (Embryos) (R5)
Topological Boundaries (R5)
TAD Boundaries (Nuc. Cycle 14)
HiCseg Domains (Kc167) (R5)
MARs (Embryos)
Polytene TADs (R5)
GCSDI Models (R5)
-   Genes and Gene Prediction Tracks
FlyBase Genes
FlyBase Exons
FlyBase CDS
FlyBase Pseudogenes
FlyBase Non-coding
Drosophila RefSeq Transcripts
piRNA Clusters (R5)
Pfam in RefSeq
UniProt
FlyBase 6.06 Genes
FlyBase 6.06 Proteins
FlyBase 6.06 Exons
FlyBase 6.06 CDS
FlyBase 6.06 Pseudogenes
FlyBase 6.06 Non-coding
+   ChIP Seq Tracks
+   ChIP-chip Tracks
+   Wolbachia Tracks
+   Expression and Regulation
+   MNase Tracks
+   RNA Seq Tracks
-   Comparative Genomics
Drosophila Conservation (36 Species)
RefSeq Drosophila Chain/Net
Drosophila Conservation (28 Species)
Drosophila Conservation (26 Species)
PhyloP (14 Species)
PhastCons (14 Species)
Conservation (14 Species)
Drosophila Chain/Net
(dm3) D. mel. Chain
(dm3) D. mel. Net
-   Variations
Variants in lacO Mutants (All)
Variants in lacO Mutants (Filtered)
UniProt Variants
dbSNP
dbVar
DGRP v2 (R5)
DGRP TE Insertions (ngs_te_mapper) (R5)
DGRP TE Insertions (TEMP)
FlyVar EMS Screen
-   Repeats
Natural TE
Interrupted Rpts
Microsatellite
Simple Repeats
WM + SDust
RepeatMasker
TE Density
Combined Library
TransposonPSI
TANTAN
Tallymer
RepeatDetector
Inverted Repeats
+   Updated Transcriptome Tracks
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