Schema for RNASlider MFE - Minimum Free Energy Estimated by RNASlider
  Database: dm6    Primary Table: RNAslider_MFE    Row Count: 1   Data last updated: 2022-10-20
fieldexampleSQL type info
fileName /gbdb/dm6/bbi/free_energy/d...varchar(255) values

This table points to a file in BigWig format.

Sample Rows

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.

RNASlider MFE (RNAslider_MFE) Track Description


This track shows the minimum free energy (MFE) profiles for 100 bp consecutive windows as estimated by RNASlider.


Horesh Y, Wexler Y, Lebenthal I, Ziv-Ukelson M, Unger R. RNAslider: a faster engine for consecutive windows folding and its application to the analysis of genomic folding asymmetry. BMC Bioinformatics. 2009 Mar 4;10:76.