MACS STARR-seq Enrichment Track Settings

Log Likelihood Ratio of STARR-seq Enrichment Versus Input (All Expression and Regulation tracks)

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Track height:	pixels (range: 11 to 110)
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Vertical viewing range:	min:	max: (range: -2000 to 2000)
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	hide Configure	OSC	STARR-Seq Enrichment Log Likelihood (OSC)	Schema
	hide Configure	S2	STARR-Seq Enrichment Log Likelihood (S2)	Schema
	hide Configure	BG3	STARR-Seq Enrichment Log Likelihood (BG3)	Schema

Description

This track shows the positions of cell-type specific enhancers identified by Self-Transcribing Active Regulatory Region Sequencing (STARR-Seq) in BG3, S2, and ovarian somatic cells (OSC). The log-likelihood enrichment profiles were calculated by MACS.

References

Zhang Y et al. Model-based analysis of ChIP-Seq (MACS). Genome Biol. 2008;9(9):R137.
Yáñez-Cuna JO, et al. Dissection of thousands of cell type-specific enhancers identifies dinucleotide repeat motifs as general enhancer features. Genome Res. 2014 Jul;24(7):1147-56.
Arnold CD et al., Genome-wide quantitative enhancer activity maps identified by STARR-seq. Science. 2013 Mar 1;339(6123):1074-7.