RNA PolII X-ChIP-Seq Track Settings

RNA PolII X-ChIP-Seq for Drosophila S2 Cells (All ChIP Seq Tracks)

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	hide	PolII (Rpb3) Peaks	X-ChIPSeq RNA PolII (Rpb3) Peaks	Schema
	hide	PolII (Rpb3) logLR	X-ChIP-Seq RNA PolII (Rpb3) Log Likelihood Enrichment	Schema

Description

These tracks show the regions that are enriched in RNA Polymerase II (Rpb3) as identified by the crosslinking ChIP-seq protocol (X-ChIP-Seq). The peak calls and the log likelihood ratios were determined by MACS2.

The dataset was retrieved from the Gene Expression Omnibus database at NCBI under the accession number GSM1647362. The results were lifted from the D. melanogaster release 5 assembly to the release 6 assembly.

Credits

Skene PJ, Henikoff S. A simple method for generating high-resolution maps of genome-wide protein binding. Elife. 2015 Jun 16;4:e09225.

Zhang Y et al. Model-based analysis of ChIP-Seq (MACS). Genome Biol. 2008;9(9):R137.