PRO-seq (R5) Track Settings

PRO-seq for Drosophila S2 Cells (R5) (All Expression and Regulation tracks)

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Track height:	pixels (range: 11 to 110)
Data view scaling:	Always include zero:
Vertical viewing range:	min:	max: (range: -100000 to 100000)
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Windowing function:		Smoothing window:	pixels
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Graph configuration help

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	hide Configure	PRO-cap (Plus)	Initiation Sites Identified by PRO-cap (Plus)	Schema
	hide Configure	PRO-cap (Minus)	Initiation Sites Identified by PRO-cap (Minus)	Schema
	hide Configure	Normalized PRO-seq (Plus)	Normalized PRO-seq Read Counts (Plus)	Schema
	hide Configure	Normalized PRO-seq (Minus)	Normalized PRO-seq Read Counts (Minus)	Schema
	hide Configure	PRO-seq (Plus)	PRO-seq Read Counts (Plus)	Schema
	hide Configure	PRO-seq (Minus)	PRO-seq Read Counts (Minus)	Schema

Description

These tracks show the read coverage from Precision Run-On and sequencing (PRO-seq) of Drosophila S2 cells. The evidence tracks also include results from a modified version of PRO-seq that was designed to detect initiation sites (PRO-cap).

Credits

The datasets were retrieved from the Gene Expression Omnibus database at NCBI under the accession number GSE42117. The results were lifted from the D. melanogaster release 5 assembly to the release 6 assembly.

Kwak H, Fuda NJ, Core LJ, Lis JT. Precise maps of RNA polymerase reveal how promoters direct initiation and pausing. Science. 2013 Feb 22;339(6122):950-3.