modENCODE Histones ChIP-Seq Track Settings

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modENCODE Chromatin State Mapping Using ChIP-Seq (All ChIP Seq Tracks)

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All	*Stage*	L3
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H3K27me3
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	Stage^↓1	Factor^↓2	Track Name^↓3
hide Configure	L3	H3K27me3	3rd Instar Larva H3K27me3 Peaks	Schema
hide Configure	L3	H3K27me3	3rd Instar Larva H3K27me3 Log Likelihood	Schema
hide Configure	L3	H3K4me2	3rd Instar Larva H3K4me2 Peaks	Schema
hide Configure	L3	H3K4me2	3rd Instar Larva H3K4me2 Log Likelihood	Schema
hide Configure	L3	H3K9me2	3rd Instar Larva H3K9me2 Peaks	Schema
hide Configure	L3	H3K9me2	3rd Instar Larva H3K9me2 Log Likelihood	Schema

Description

This track shows the results of the ChIP-Seq analysis of multiple histone modifications at different developmental stages using MACS. The ChIP-Seq data were produced as part of the modENCODE project.

Credits

Zhang Y et al. Model-based analysis of ChIP-Seq (MACS). Genome Biol. 2008;9(9):R137.
Ho JW et al. ChIP-chip versus ChIP-seq: lessons for experimental design and data analysis. BMC Genomics. 2011 Feb 28;12:134.
The ChIP-Seq datasets are available at the NCBI GEO database under the accession number GSE16013.