UCSC Genome Browser on D. mojavensis Apr. 2014 (GEP/DmojImproved)
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improved_6498:2,568,000-2,600,000 32,001 bp.
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-   Mapping and Sequencing Tracks
Base Position
Gap
GC Percent
Restr Enzymes
Short Match
Melting Temp.
GEP Fosmids
Assembly Notes
-   Genes and Gene Prediction Tracks
GEP Genes
GLEAN-R Genes
GLEAN-R Gene Density
D. mel Proteins
Potential Frame Shifts
GLEAN-R Alignments
D. mojavensis ESTs
Non-coding RNAs
D. mel Non-coding RNAs
-   RNA Seq Tracks
modENCODE RNA-Seq Coverage
modENCODE TopHat Junctions
modENCODE TrueSight Junctions
modENCODE Cufflinks Transcripts
modENCODE CEM Transcripts
D. mojavensis Assembled Proteins
D. virilis Assembled Transcripts
D. virilis Assembled Proteins
D. virilis Unmapped Proteins
Head Tissues RNA-Seq Coverage
Head Tissues TopHat Junctions
Head Tissues Cufflinks Transcripts
Head Tissues CEM Transcripts
Unmapped modENCODE RNA-Seq
-   Comparative Genomics
Drosophila Conservation
Conserved Elements
DmojWGS Chain
DmojWGS Net
D. mojavensis CAF1 Difference
D. melanogaster Chain
D. melanogaster Net
D. yakuba Chain
D. yakuba Net
D. erecta Chain
D. erecta Net
D. virilis Chain
D. virilis Net
D. grimshawi Chain
D. grimshawi Net
-   Variation and Repeats
TransposonPSI
RepBase Repeats
Combined Repeats
LTRharvest
LTR_Finder
BLASTN | RECON | MAP Repeats
ReAS Repeats
RepeatModeler Classified
DCBLAST | Grouper | MAP Repeats
PALS | PILER-DF | MUSCLE Repeats
Tallymer | CD-HIT Repeats
Repeat Density
WindowMasker
TANTAN
Tallymer
TRF Density
Repseek
Inverted Repeats
PHOBOS Repeats
mReps Repeats
Repfind Repeats
RepeatMasker
Simple Repeats
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