UCSC Genome Browser on D. melanogaster Aug. 2014 (BDGP Release 6 + ISO1 MT/dm6)
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chr4:307,000-312,000 5,001 bp.
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-   Mapping and Sequencing Tracks
Base Position
Chromosome Band
Gap
GC Percent
Assembly
INSDC
RefSeq Acc
Restr Enzymes
Short Match
Melting Temp.
RNASlider MFE
+   Transgenic Insertions
+   Chromatin Domains
-   Genes and Gene Prediction Tracks
FlyBase Genes
FlyBase Exons
FlyBase CDS
FlyBase Pseudogenes
FlyBase Non-coding
Drosophila RefSeq Transcripts
piRNA Clusters (R5)
Pfam in RefSeq
UniProt
FlyBase 6.06 Genes
FlyBase 6.06 Proteins
FlyBase 6.06 Exons
FlyBase 6.06 CDS
FlyBase 6.06 Pseudogenes
FlyBase 6.06 Non-coding
-   ChIP Seq Tracks
Phantom Peaks (R5)
modENCODE Histones ChIP-Seq
PePr Histone Modifications Peaks
MUSIC Histone Modifications Peaks
Genome Mappability
modENCODE PolII ChIP-Seq
MUSIC PolII ChIP-Seq Peaks
PolII ChIP-Seq (Cell Lines)
RNA PolII X-ChIP-Seq
Inhibit Topoisomerases PolII ChIP-Seq
Basal Transcription Factors ChIP-Seq
GAF KD Differential Regions
Basal Transcription Factors ChIP-exo
ORGANIC Enrichment (S2 Cells)
Architectural Proteins ChIP-Seq (Kc167)
Architectural Proteins ChIP-Seq (S2)
Heat Shock Proteins ChIP-Seq (S2)
TF ChIP-nexus
ChIP-Seq MBT Embryos
CLAMP ChIP-Seq
Henriques 2018 ChIP-Seq
Zelda ChIP-Seq
Su(H) ChIP-Seq
Histone Variants ChIP-Seq (S2)
R-Loop DRIP-Seq (S2)
modENCODE Histone Modifications (R5)
modENCODE Chromosomal Proteins (R5)
modERN TF Peaks
+   ChIP-chip Tracks
+   Wolbachia Tracks
+   Expression and Regulation
+   MNase Tracks
+   RNA Seq Tracks
+   Comparative Genomics
-   Variations
Variants in lacO Mutants (All)
Variants in lacO Mutants (Filtered)
UniProt Variants
dbSNP
dbVar
DGRP v2 (R5)
DGRP TE Insertions (ngs_te_mapper) (R5)
DGRP TE Insertions (TEMP)
FlyVar EMS Screen
-   Repeats
Natural TE
Interrupted Rpts
Microsatellite
Simple Repeats
WM + SDust
RepeatMasker
TE Density
Combined Library
TransposonPSI
TANTAN
Tallymer
RepeatDetector
Inverted Repeats
-   Updated Transcriptome Tracks
Combined modENCODE RNA-Seq (Development)
Combined Splice Junctions (Development)
modENCODE RNA-Seq (Development)
Combined modENCODE RNA-Seq (Tissues)
Combined Splice Junctions (Tissues)
modENCODE RNA-Seq (Tissues)
Combined modENCODE RNA-Seq (Cell Lines)
Combined Splice Junctions (Cell Lines)
modENCODE RNA-Seq (Cell Lines)
Combined RAMPAGE Embryos TSS
TSRchitect RAMPAGE Embryos TSS
TSRchitect Combined RAMPAGE TSS (Replicate 1)
TSRchitect RAMPAGE TSS Read Density (Replicate 1)
TSRchitect Combined RAMPAGE TSS (Replicate 2)
TSRchitect RAMPAGE TSS Read Density (Replicate 2)
       
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